Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0662160 | GAU40839.1 | 68.692 | 214 | 61 | 3 | 76 | 288 | 31 | 239 | 1.80e-91 | 302 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0662160 | A0A2Z6P9Q3 | 68.692 | 214 | 61 | 3 | 76 | 288 | 31 | 239 | 8.61e-92 | 302 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0662160 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0662160 | Msa0828750 | 0.941760 | 2.369010e-101 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0662160 | MtrunA17_Chr2g0296781 | 68.156 | 179 | 52 | 2 | 110 | 288 | 1 | 174 | 5.84e-76 | 248 |
| Msa0662160 | MtrunA17_Chr1g0196541 | 54.438 | 169 | 76 | 1 | 120 | 288 | 7 | 174 | 1.01e-52 | 186 |
| Msa0662160 | MtrunA17_Chr6g0476431 | 58.889 | 90 | 33 | 1 | 110 | 199 | 1 | 86 | 2.43e-30 | 111 |
| Msa0662160 | MtrunA17_Chr6g0477261 | 79.365 | 63 | 13 | 0 | 226 | 288 | 1 | 63 | 3.23e-24 | 104 |
| Msa0662160 | MtrunA17_Chr6g0451441 | 27.559 | 254 | 170 | 6 | 24 | 273 | 5 | 248 | 5.21e-19 | 88.2 |
| Msa0662160 | MtrunA17_Chr5g0441581 | 31.633 | 196 | 115 | 5 | 99 | 288 | 20 | 202 | 1.13e-18 | 87.8 |
| Msa0662160 | MtrunA17_Chr5g0409511 | 78.049 | 41 | 9 | 0 | 291 | 331 | 15 | 55 | 8.85e-18 | 76.6 |
| Msa0662160 | MtrunA17_Chr6g0479711 | 69.231 | 39 | 12 | 0 | 293 | 331 | 62 | 100 | 1.15e-15 | 72.0 |
| Msa0662160 | MtrunA17_Chr4g0051451 | 48.148 | 81 | 31 | 3 | 291 | 360 | 1 | 81 | 9.10e-15 | 69.3 |
| Msa0662160 | MtrunA17_Chr7g0258861 | 24.742 | 194 | 138 | 3 | 99 | 288 | 3 | 192 | 3.42e-12 | 66.6 |
| Msa0662160 | MtrunA17_Chr7g0267681 | 56.410 | 39 | 17 | 0 | 293 | 331 | 49 | 87 | 1.14e-11 | 60.5 |
| Msa0662160 | MtrunA17_Chr2g0329361 | 29.577 | 142 | 86 | 4 | 89 | 222 | 44 | 179 | 3.48e-11 | 62.8 |
| Msa0662160 | MtrunA17_Chr7g0243691 | 53.846 | 39 | 18 | 0 | 293 | 331 | 62 | 100 | 4.60e-11 | 59.3 |
| Msa0662160 | MtrunA17_Chr8g0392101 | 52.632 | 38 | 18 | 0 | 294 | 331 | 72 | 109 | 7.56e-11 | 58.9 |
| Msa0662160 | MtrunA17_Chr8g0336101 | 62.162 | 37 | 14 | 0 | 295 | 331 | 188 | 224 | 9.54e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0662160 | AT1G76320.1 | 30.588 | 170 | 109 | 4 | 117 | 284 | 4 | 166 | 1.45e-14 | 75.5 |
| Msa0662160 | AT1G76320.4 | 30.588 | 170 | 109 | 4 | 117 | 284 | 4 | 166 | 1.45e-14 | 75.5 |
| Msa0662160 | AT1G76320.3 | 30.588 | 170 | 109 | 4 | 117 | 284 | 4 | 166 | 1.52e-14 | 75.5 |
| Msa0662160 | AT1G76320.2 | 30.588 | 170 | 109 | 4 | 117 | 284 | 4 | 166 | 1.62e-14 | 75.5 |
Find 70 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACAACCAGCCTGCGCAGC+AGG | 0.259646 | 4_3:+74066149 | None:intergenic |
| TATGCTAGATGTATAGGTTT+TGG | 0.261658 | 4_3:-74066968 | Msa0662160:CDS |
| CAGGCTGGTTGTTGCTGTTC+GGG | 0.264478 | 4_3:-74066140 | Msa0662160:CDS |
| CTGCTTTCTGCCTGCTGCGC+AGG | 0.264898 | 4_3:-74066159 | Msa0662160:CDS |
| AAGAATTATGCTAGATGTAT+AGG | 0.283443 | 4_3:-74066974 | Msa0662160:CDS |
| TGGAACAATTACTATTTCTA+AGG | 0.295449 | 4_3:-74066780 | Msa0662160:CDS |
| TCTGTTGTTACTGTTTGTTT+TGG | 0.309542 | 4_3:-74066115 | Msa0662160:CDS |
| GCGAGATGTAGGGCTGCTTA+TGG | 0.310927 | 4_3:-74066401 | Msa0662160:intron |
| TTTCTGCCTGCTGCGCAGGC+TGG | 0.331640 | 4_3:-74066155 | Msa0662160:CDS |
| GCAGGCTGGTTGTTGCTGTT+CGG | 0.342764 | 4_3:-74066141 | Msa0662160:CDS |
| ATATAGACCCTAGTATAAAA+AGG | 0.351811 | 4_3:-74066691 | Msa0662160:CDS |
| AAAGTACCTCATTTAGTAGT+TGG | 0.359646 | 4_3:+74067930 | None:intergenic |
| TTAAAATATCTTGATTTGCT+TGG | 0.366169 | 4_3:+74066725 | None:intergenic |
| AGAAGAGGAGGAGGAGGAAG+AGG | 0.369873 | 4_3:-74067194 | Msa0662160:CDS |
| GGAGGAAGAGGAAGAGGAAG+AGG | 0.371902 | 4_3:-74067182 | Msa0662160:CDS |
| GGAGGAGGAGGAAGAGGAAG+AGG | 0.371902 | 4_3:-74067188 | Msa0662160:CDS |
| AGAGGAAGAGGAAGAGGAAG+AGG | 0.391168 | 4_3:-74067104 | Msa0662160:CDS |
| AGAGGAAGAGGAAGAGGAAG+AGG | 0.394447 | 4_3:-74067110 | Msa0662160:CDS |
| AGAGGAAGAGGAAGAGGAAG+AGG | 0.394447 | 4_3:-74067116 | Msa0662160:CDS |
| AGAGGAAGAGGAAGAGGAAG+AGG | 0.394447 | 4_3:-74067122 | Msa0662160:CDS |
| AGAGGAAGAGGAAGAGGAAG+AGG | 0.394447 | 4_3:-74067128 | Msa0662160:CDS |
| AGAGGAAGAGGAAGAGGAAG+AGG | 0.394447 | 4_3:-74067134 | Msa0662160:CDS |
| AGAGGAAGAGGAAGAGGAAG+AGG | 0.394447 | 4_3:-74067140 | Msa0662160:CDS |
| AGAGGAAGAGGAAGAGGAAG+AGG | 0.394447 | 4_3:-74067146 | Msa0662160:CDS |
| AGAGGAAGAGGAAGAGGAAG+AGG | 0.394447 | 4_3:-74067152 | Msa0662160:CDS |
| AGAGGAAGAGGAAGAGGAAG+AGG | 0.394447 | 4_3:-74067158 | Msa0662160:CDS |
| AGAGGAAGAGGAAGAGGAAG+AGG | 0.394447 | 4_3:-74067164 | Msa0662160:CDS |
| AGAGGAAGAGGAAGAGGAAG+AGG | 0.394447 | 4_3:-74067170 | Msa0662160:CDS |
| AGAGGAAGAGGAAGAGGAAG+AGG | 0.394447 | 4_3:-74067176 | Msa0662160:CDS |
| GGATATGATAACCTTACATT+CGG | 0.409109 | 4_3:-74066596 | Msa0662160:CDS |
| CAGGCAGAAAGCAGCACCAG+TGG | 0.409934 | 4_3:+74066168 | None:intergenic |
| ACTATTTCTAAGGTTGCTCT+TGG | 0.411911 | 4_3:-74066770 | Msa0662160:CDS |
| AGAAGAAGAAGAGGAGGAGG+AGG | 0.415474 | 4_3:-74067200 | Msa0662160:CDS |
| TTAAATTTCATGCCAACCTT+AGG | 0.424975 | 4_3:+74067037 | None:intergenic |
| AAGTGAGGCGGCTTCGACTT+GGG | 0.428800 | 4_3:-74066544 | Msa0662160:CDS |
| CGAGATGTAGGGCTGCTTAT+GGG | 0.435390 | 4_3:-74066400 | Msa0662160:intron |
| TACTTACATTAATCCAAGCT+TGG | 0.439441 | 4_3:+74066651 | None:intergenic |
| ACGAGTGGAGTTGGTGTCCC+CGG | 0.443291 | 4_3:-74066299 | Msa0662160:CDS |
| TAGCATGAAAACACATTGTA+AGG | 0.444794 | 4_3:-74066831 | Msa0662160:CDS |
| TGGAGGTTAATGACCAAGCT+TGG | 0.446409 | 4_3:-74066664 | Msa0662160:CDS |
| AAACATACATGCCGGAGTAT+TGG | 0.447153 | 4_3:+74066323 | None:intergenic |
| CTGCTTATGGGATGAGTTAG+TGG | 0.448679 | 4_3:-74066388 | Msa0662160:CDS |
| AGGTTAAAGTGTTGACTTGG+AGG | 0.490511 | 4_3:-74066362 | Msa0662160:CDS |
| ATGGGATGAGTTAGTGGAGA+AGG | 0.492762 | 4_3:-74066382 | Msa0662160:CDS |
| CGAGTGGAGTTGGTGTCCCC+GGG | 0.504042 | 4_3:-74066298 | Msa0662160:CDS |
| GAGGAAGAGGAAGAGGAAGA+GGG | 0.510954 | 4_3:-74067103 | Msa0662160:CDS |
| AAAGTGAGGCGGCTTCGACT+TGG | 0.512577 | 4_3:-74066545 | Msa0662160:CDS |
| TTGACTTGGAGGTGGTTGTT+CGG | 0.529604 | 4_3:-74066351 | Msa0662160:CDS |
| TTACCTCAAAAGACACTCCC+GGG | 0.529717 | 4_3:+74066281 | None:intergenic |
| TACTCACATAGCTTCTTGCA+CGG | 0.535718 | 4_3:+74066882 | None:intergenic |
| AGAAGGTTAAAGTGTTGACT+TGG | 0.538252 | 4_3:-74066365 | Msa0662160:CDS |
| AATGAACCAACTACTAAATG+AGG | 0.540642 | 4_3:-74067936 | Msa0662160:intron |
| AGGCGGCTTCGACTTGGGAT+AGG | 0.542513 | 4_3:-74066539 | Msa0662160:CDS |
| GATATGATAACCTTACATTC+GGG | 0.543620 | 4_3:-74066595 | Msa0662160:CDS |
| AAATGAAGATGATGAACCTA+AGG | 0.544931 | 4_3:-74067053 | Msa0662160:CDS |
| GAAGATGATGAACCTAAGGT+TGG | 0.554642 | 4_3:-74067049 | Msa0662160:CDS |
| TGCCAACCCAAAACCGCCCA+AGG | 0.574248 | 4_3:+74066084 | None:intergenic |
| AAGCTTGGATTAATGTAAGT+AGG | 0.576078 | 4_3:-74066649 | Msa0662160:CDS |
| ATTACCTCAAAAGACACTCC+CGG | 0.576503 | 4_3:+74066280 | None:intergenic |
| CATGACAGAACAGCAGCCAC+TGG | 0.578553 | 4_3:-74066184 | Msa0662160:intron |
| CACTCGTAAAACATACATGC+CGG | 0.583300 | 4_3:+74066315 | None:intergenic |
| AATGTATGTGTGTCTTCAGA+TGG | 0.584390 | 4_3:-74066800 | Msa0662160:CDS |
| TTAAAGTGTTGACTTGGAGG+TGG | 0.605815 | 4_3:-74066359 | Msa0662160:CDS |
| GAAACTACATAGACAAAGTG+AGG | 0.617900 | 4_3:-74066559 | Msa0662160:CDS |
| GGAAGAGGGTGAAAATTGTG+AGG | 0.627046 | 4_3:-74067089 | Msa0662160:CDS |
| GTTCGGAAGATCCAATACTC+CGG | 0.653042 | 4_3:-74066334 | Msa0662160:CDS |
| TCTATGGTTGTTGAAGCAAG+TGG | 0.653447 | 4_3:-74066617 | Msa0662160:CDS |
| AAAACAAACAGTAACAACAG+AGG | 0.728183 | 4_3:+74066117 | None:intergenic |
| TACCTCAAAAGACACTCCCG+GGG | 0.737909 | 4_3:+74066282 | None:intergenic |
| ACTACATAGACAAAGTGAGG+CGG | 0.739143 | 4_3:-74066556 | Msa0662160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAATAAATAAATATA+TGG | - | chr4_3:74066347-74066366 | Msa0662160:CDS | 0.0% |
| !! | AAAATAAATAAATAAATATA+TGG | - | chr4_3:74066347-74066366 | Msa0662160:CDS | 0.0% |
| !! | AATATAAAAAGGAAATTAGA+TGG | + | chr4_3:74066307-74066326 | None:intergenic | 15.0% |
| !!! | ACTAACAAAATAATTTTGAA+TGG | + | chr4_3:74067514-74067533 | None:intergenic | 15.0% |
| !! | AATATAAAAAGGAAATTAGA+TGG | + | chr4_3:74066307-74066326 | None:intergenic | 15.0% |
| !!! | ACTAACAAAATAATTTTGAA+TGG | + | chr4_3:74067514-74067533 | None:intergenic | 15.0% |
| !! | GAAAATCAAATTTCAATTGA+TGG | + | chr4_3:74066567-74066586 | None:intergenic | 20.0% |
| !! | ATCAACTGAATTAAAAGTAA+AGG | + | chr4_3:74066670-74066689 | None:intergenic | 20.0% |
| !!! | TAAAAAATTTGTTGCATTAG+TGG | - | chr4_3:74066708-74066727 | Msa0662160:CDS | 20.0% |
| !!! | GAAAAAAGTATTTTACTCTA+GGG | - | chr4_3:74067106-74067125 | Msa0662160:CDS | 20.0% |
| !!! | ATTTGGCTTTAAAAGATTTT+TGG | + | chr4_3:74067163-74067182 | None:intergenic | 20.0% |
| !!! | TTAAAATATCTTGATTTGCT+TGG | + | chr4_3:74067294-74067313 | None:intergenic | 20.0% |
| !!! | TTAATGTAAGTAGGAATTTT+TGG | - | chr4_3:74067376-74067395 | Msa0662160:intron | 20.0% |
| !!! | TAGTGACTTTTATTATGTAA+TGG | - | chr4_3:74067548-74067567 | Msa0662160:intron | 20.0% |
| !! | GAAAATCAAATTTCAATTGA+TGG | + | chr4_3:74066567-74066586 | None:intergenic | 20.0% |
| !! | ATCAACTGAATTAAAAGTAA+AGG | + | chr4_3:74066670-74066689 | None:intergenic | 20.0% |
| !!! | TAAAAAATTTGTTGCATTAG+TGG | - | chr4_3:74066708-74066727 | Msa0662160:CDS | 20.0% |
| !!! | GAAAAAAGTATTTTACTCTA+GGG | - | chr4_3:74067106-74067125 | Msa0662160:CDS | 20.0% |
| !!! | ATTTGGCTTTAAAAGATTTT+TGG | + | chr4_3:74067163-74067182 | None:intergenic | 20.0% |
| !!! | TTAAAATATCTTGATTTGCT+TGG | + | chr4_3:74067294-74067313 | None:intergenic | 20.0% |
| !!! | TTAATGTAAGTAGGAATTTT+TGG | - | chr4_3:74067376-74067395 | Msa0662160:intron | 20.0% |
| !!! | TAGTGACTTTTATTATGTAA+TGG | - | chr4_3:74067548-74067567 | Msa0662160:intron | 20.0% |
| ! | TAAAAAGGAAATTAGATGGT+GGG | + | chr4_3:74066303-74066322 | None:intergenic | 25.0% |
| ! | ATAAAAAGGAAATTAGATGG+TGG | + | chr4_3:74066304-74066323 | None:intergenic | 25.0% |
| ! | AAAATCAGAACATAAGGTTA+TGG | + | chr4_3:74066457-74066476 | None:intergenic | 25.0% |
| ! | TTGAACAAAATCAGAACATA+AGG | + | chr4_3:74066463-74066482 | None:intergenic | 25.0% |
| ! | AAGAATTATGCTAGATGTAT+AGG | - | chr4_3:74067042-74067061 | Msa0662160:CDS | 25.0% |
| ! | AGCAAAATCAGTACAAAAAA+TGG | - | chr4_3:74067075-74067094 | Msa0662160:CDS | 25.0% |
| !!! | GGAAAAAAGTATTTTACTCT+AGG | - | chr4_3:74067105-74067124 | Msa0662160:CDS | 25.0% |
| !!! | TGGAACAATTACTATTTCTA+AGG | - | chr4_3:74067236-74067255 | Msa0662160:CDS | 25.0% |
| ! | ATATAGACCCTAGTATAAAA+AGG | - | chr4_3:74067325-74067344 | Msa0662160:CDS | 25.0% |
| !!! | CTTTTATTATGTAATGGATG+TGG | - | chr4_3:74067554-74067573 | Msa0662160:intron | 25.0% |
| !!! | TCGTTTACGAAATGTTTTTT+GGG | - | chr4_3:74067587-74067606 | Msa0662160:intron | 25.0% |
| ! | TAAAAAGGAAATTAGATGGT+GGG | + | chr4_3:74066303-74066322 | None:intergenic | 25.0% |
| ! | ATAAAAAGGAAATTAGATGG+TGG | + | chr4_3:74066304-74066323 | None:intergenic | 25.0% |
| ! | AAAATCAGAACATAAGGTTA+TGG | + | chr4_3:74066457-74066476 | None:intergenic | 25.0% |
| ! | TTGAACAAAATCAGAACATA+AGG | + | chr4_3:74066463-74066482 | None:intergenic | 25.0% |
| ! | AAGAATTATGCTAGATGTAT+AGG | - | chr4_3:74067042-74067061 | Msa0662160:CDS | 25.0% |
| ! | AGCAAAATCAGTACAAAAAA+TGG | - | chr4_3:74067075-74067094 | Msa0662160:CDS | 25.0% |
| !!! | GGAAAAAAGTATTTTACTCT+AGG | - | chr4_3:74067105-74067124 | Msa0662160:CDS | 25.0% |
| !!! | TGGAACAATTACTATTTCTA+AGG | - | chr4_3:74067236-74067255 | Msa0662160:CDS | 25.0% |
| ! | ATATAGACCCTAGTATAAAA+AGG | - | chr4_3:74067325-74067344 | Msa0662160:CDS | 25.0% |
| !!! | CTTTTATTATGTAATGGATG+TGG | - | chr4_3:74067554-74067573 | Msa0662160:intron | 25.0% |
| !!! | TCGTTTACGAAATGTTTTTT+GGG | - | chr4_3:74067587-74067606 | Msa0662160:intron | 25.0% |
| ! | AAAGTACCTCATTTAGTAGT+TGG | + | chr4_3:74066089-74066108 | None:intergenic | 30.0% |
| AAATGACCAAAATACTCCTA+GGG | - | chr4_3:74066141-74066160 | Msa0662160:CDS | 30.0% | |
| GGTTAAGGGTTAATCTAAAA+TGG | + | chr4_3:74066212-74066231 | None:intergenic | 30.0% | |
| !!! | CTGTTATCAGTTTTGGTTAA+GGG | + | chr4_3:74066226-74066245 | None:intergenic | 30.0% |
| !!! | ACTGTTATCAGTTTTGGTTA+AGG | + | chr4_3:74066227-74066246 | None:intergenic | 30.0% |
| AAAAAGGAAATTAGATGGTG+GGG | + | chr4_3:74066302-74066321 | None:intergenic | 30.0% | |
| AAGGAAGTAACATAAGGTTA+TGG | + | chr4_3:74066432-74066451 | None:intergenic | 30.0% | |
| GTAGCAATTCTGATAAAAAG+AGG | + | chr4_3:74066533-74066552 | None:intergenic | 30.0% | |
| ! | CAAATTTCAATTGATGGTTG+AGG | + | chr4_3:74066561-74066580 | None:intergenic | 30.0% |
| GAATTAAAAGTAAAGGCAAC+AGG | + | chr4_3:74066663-74066682 | None:intergenic | 30.0% | |
| AAATGAAGATGATGAACCTA+AGG | - | chr4_3:74066963-74066982 | Msa0662160:CDS | 30.0% | |
| TTAAATTTCATGCCAACCTT+AGG | + | chr4_3:74066982-74067001 | None:intergenic | 30.0% | |
| ! | TATGCTAGATGTATAGGTTT+TGG | - | chr4_3:74067048-74067067 | Msa0662160:CDS | 30.0% |
| AGTACAAAAAATGGAGATGA+TGG | - | chr4_3:74067084-74067103 | Msa0662160:CDS | 30.0% | |
| ! | TTACAATGTGTTTTCATGCT+AGG | + | chr4_3:74067186-74067205 | None:intergenic | 30.0% |
| TAGCATGAAAACACATTGTA+AGG | - | chr4_3:74067185-74067204 | Msa0662160:CDS | 30.0% | |
| ! | CCAATCTCCTTTTTATACTA+GGG | + | chr4_3:74067335-74067354 | None:intergenic | 30.0% |
| ! | TCCAATCTCCTTTTTATACT+AGG | + | chr4_3:74067336-74067355 | None:intergenic | 30.0% |
| TAGTATAAAAAGGAGATTGG+AGG | - | chr4_3:74067335-74067354 | Msa0662160:intron | 30.0% | |
| TACTTACATTAATCCAAGCT+TGG | + | chr4_3:74067368-74067387 | None:intergenic | 30.0% | |
| AAGCTTGGATTAATGTAAGT+AGG | - | chr4_3:74067367-74067386 | Msa0662160:intron | 30.0% | |
| !!! | AAGTAGGAATTTTTGGTCTA+TGG | - | chr4_3:74067383-74067402 | Msa0662160:intron | 30.0% |
| GGATATGATAACCTTACATT+CGG | - | chr4_3:74067420-74067439 | Msa0662160:intron | 30.0% | |
| GATATGATAACCTTACATTC+GGG | - | chr4_3:74067421-74067440 | Msa0662160:intron | 30.0% | |
| !!! | GTCGTTTACGAAATGTTTTT+TGG | - | chr4_3:74067586-74067605 | Msa0662160:intron | 30.0% |
| AAAACAAACAGTAACAACAG+AGG | + | chr4_3:74067902-74067921 | None:intergenic | 30.0% | |
| ! | TCTGTTGTTACTGTTTGTTT+TGG | - | chr4_3:74067901-74067920 | Msa0662160:intron | 30.0% |
| !! | CTGTTGTTACTGTTTGTTTT+GGG | - | chr4_3:74067902-74067921 | Msa0662160:intron | 30.0% |
| ! | AAAGTACCTCATTTAGTAGT+TGG | + | chr4_3:74066089-74066108 | None:intergenic | 30.0% |
| AAATGACCAAAATACTCCTA+GGG | - | chr4_3:74066141-74066160 | Msa0662160:CDS | 30.0% | |
| GGTTAAGGGTTAATCTAAAA+TGG | + | chr4_3:74066212-74066231 | None:intergenic | 30.0% | |
| !!! | CTGTTATCAGTTTTGGTTAA+GGG | + | chr4_3:74066226-74066245 | None:intergenic | 30.0% |
| !!! | ACTGTTATCAGTTTTGGTTA+AGG | + | chr4_3:74066227-74066246 | None:intergenic | 30.0% |
| AAAAAGGAAATTAGATGGTG+GGG | + | chr4_3:74066302-74066321 | None:intergenic | 30.0% | |
| AAGGAAGTAACATAAGGTTA+TGG | + | chr4_3:74066432-74066451 | None:intergenic | 30.0% | |
| GTAGCAATTCTGATAAAAAG+AGG | + | chr4_3:74066533-74066552 | None:intergenic | 30.0% | |
| ! | CAAATTTCAATTGATGGTTG+AGG | + | chr4_3:74066561-74066580 | None:intergenic | 30.0% |
| GAATTAAAAGTAAAGGCAAC+AGG | + | chr4_3:74066663-74066682 | None:intergenic | 30.0% | |
| AAATGAAGATGATGAACCTA+AGG | - | chr4_3:74066963-74066982 | Msa0662160:CDS | 30.0% | |
| TTAAATTTCATGCCAACCTT+AGG | + | chr4_3:74066982-74067001 | None:intergenic | 30.0% | |
| ! | TATGCTAGATGTATAGGTTT+TGG | - | chr4_3:74067048-74067067 | Msa0662160:CDS | 30.0% |
| AGTACAAAAAATGGAGATGA+TGG | - | chr4_3:74067084-74067103 | Msa0662160:CDS | 30.0% | |
| ! | TTACAATGTGTTTTCATGCT+AGG | + | chr4_3:74067186-74067205 | None:intergenic | 30.0% |
| TAGCATGAAAACACATTGTA+AGG | - | chr4_3:74067185-74067204 | Msa0662160:CDS | 30.0% | |
| ! | CCAATCTCCTTTTTATACTA+GGG | + | chr4_3:74067335-74067354 | None:intergenic | 30.0% |
| ! | TCCAATCTCCTTTTTATACT+AGG | + | chr4_3:74067336-74067355 | None:intergenic | 30.0% |
| TAGTATAAAAAGGAGATTGG+AGG | - | chr4_3:74067335-74067354 | Msa0662160:intron | 30.0% | |
| TACTTACATTAATCCAAGCT+TGG | + | chr4_3:74067368-74067387 | None:intergenic | 30.0% | |
| AAGCTTGGATTAATGTAAGT+AGG | - | chr4_3:74067367-74067386 | Msa0662160:intron | 30.0% | |
| !!! | AAGTAGGAATTTTTGGTCTA+TGG | - | chr4_3:74067383-74067402 | Msa0662160:intron | 30.0% |
| GGATATGATAACCTTACATT+CGG | - | chr4_3:74067420-74067439 | Msa0662160:intron | 30.0% | |
| GATATGATAACCTTACATTC+GGG | - | chr4_3:74067421-74067440 | Msa0662160:intron | 30.0% | |
| !!! | GTCGTTTACGAAATGTTTTT+TGG | - | chr4_3:74067586-74067605 | Msa0662160:intron | 30.0% |
| AAAACAAACAGTAACAACAG+AGG | + | chr4_3:74067902-74067921 | None:intergenic | 30.0% | |
| ! | TCTGTTGTTACTGTTTGTTT+TGG | - | chr4_3:74067901-74067920 | Msa0662160:intron | 30.0% |
| !! | CTGTTGTTACTGTTTGTTTT+GGG | - | chr4_3:74067902-74067921 | Msa0662160:intron | 30.0% |
| !! | CACAAAATTTTGACAGAGAG+AGG | + | chr4_3:74066119-74066138 | None:intergenic | 35.0% |
| GAAATGACCAAAATACTCCT+AGG | - | chr4_3:74066140-74066159 | Msa0662160:CDS | 35.0% | |
| !!! | TTTAGTCCCTAGGAGTATTT+TGG | + | chr4_3:74066150-74066169 | None:intergenic | 35.0% |
| ! | AAATTGACTCACAATCACCT+AGG | - | chr4_3:74066167-74066186 | Msa0662160:CDS | 35.0% |
| ! | AGCACAACTGTTATCAGTTT+TGG | + | chr4_3:74066233-74066252 | None:intergenic | 35.0% |
| CTGATAACAGTTGTGCTATA+TGG | - | chr4_3:74066236-74066255 | Msa0662160:intron | 35.0% | |
| ATATATGGAAGAGACAATCG+CGG | - | chr4_3:74066362-74066381 | Msa0662160:CDS | 35.0% | |
| GTAACATAAGGTTATGGAGA+AGG | + | chr4_3:74066426-74066445 | None:intergenic | 35.0% | |
| ATGGAGAAGGAAGTAACATA+AGG | + | chr4_3:74066438-74066457 | None:intergenic | 35.0% | |
| AGAACATAAGGTTATGGAGA+AGG | + | chr4_3:74066451-74066470 | None:intergenic | 35.0% | |
| TTCAACTGGATGCTAAAACT+GGG | + | chr4_3:74066589-74066608 | None:intergenic | 35.0% | |
| CTTACTATTGTCTCTTCAAC+TGG | + | chr4_3:74066603-74066622 | None:intergenic | 35.0% | |
| AGAAGAAGAAGAAGAAGAAG+AGG | - | chr4_3:74066753-74066772 | Msa0662160:CDS | 35.0% | |
| ! | TGTGTTTTCATGCTAGGATT+TGG | + | chr4_3:74067180-74067199 | None:intergenic | 35.0% |
| AATGTATGTGTGTCTTCAGA+TGG | - | chr4_3:74067216-74067235 | Msa0662160:CDS | 35.0% | |
| !! | ACTATTTCTAAGGTTGCTCT+TGG | - | chr4_3:74067246-74067265 | Msa0662160:CDS | 35.0% |
| CCCTAGTATAAAAAGGAGAT+TGG | - | chr4_3:74067332-74067351 | Msa0662160:CDS | 35.0% | |
| !!! | CATCTTTTTTCCCGAATGTA+AGG | + | chr4_3:74067434-74067453 | None:intergenic | 35.0% |
| GAAACTACATAGACAAAGTG+AGG | - | chr4_3:74067457-74067476 | Msa0662160:intron | 35.0% | |
| !! | AGAAGGTTAAAGTGTTGACT+TGG | - | chr4_3:74067651-74067670 | Msa0662160:intron | 35.0% |
| !!! | TTGTTTTGGGACATTTTCCT+TGG | - | chr4_3:74067915-74067934 | Msa0662160:intron | 35.0% |
| !!! | TGTTTTGGGACATTTTCCTT+GGG | - | chr4_3:74067916-74067935 | Msa0662160:intron | 35.0% |
| !! | CACAAAATTTTGACAGAGAG+AGG | + | chr4_3:74066119-74066138 | None:intergenic | 35.0% |
| GAAATGACCAAAATACTCCT+AGG | - | chr4_3:74066140-74066159 | Msa0662160:CDS | 35.0% | |
| !!! | TTTAGTCCCTAGGAGTATTT+TGG | + | chr4_3:74066150-74066169 | None:intergenic | 35.0% |
| ! | AAATTGACTCACAATCACCT+AGG | - | chr4_3:74066167-74066186 | Msa0662160:CDS | 35.0% |
| ! | AGCACAACTGTTATCAGTTT+TGG | + | chr4_3:74066233-74066252 | None:intergenic | 35.0% |
| CTGATAACAGTTGTGCTATA+TGG | - | chr4_3:74066236-74066255 | Msa0662160:intron | 35.0% | |
| ATATATGGAAGAGACAATCG+CGG | - | chr4_3:74066362-74066381 | Msa0662160:CDS | 35.0% | |
| GTAACATAAGGTTATGGAGA+AGG | + | chr4_3:74066426-74066445 | None:intergenic | 35.0% | |
| ATGGAGAAGGAAGTAACATA+AGG | + | chr4_3:74066438-74066457 | None:intergenic | 35.0% | |
| AGAACATAAGGTTATGGAGA+AGG | + | chr4_3:74066451-74066470 | None:intergenic | 35.0% | |
| TTCAACTGGATGCTAAAACT+GGG | + | chr4_3:74066589-74066608 | None:intergenic | 35.0% | |
| CTTACTATTGTCTCTTCAAC+TGG | + | chr4_3:74066603-74066622 | None:intergenic | 35.0% | |
| AGAAGAAGAAGAAGAAGAAG+AGG | - | chr4_3:74066753-74066772 | Msa0662160:CDS | 35.0% | |
| ! | TGTGTTTTCATGCTAGGATT+TGG | + | chr4_3:74067180-74067199 | None:intergenic | 35.0% |
| AATGTATGTGTGTCTTCAGA+TGG | - | chr4_3:74067216-74067235 | Msa0662160:CDS | 35.0% | |
| !! | ACTATTTCTAAGGTTGCTCT+TGG | - | chr4_3:74067246-74067265 | Msa0662160:CDS | 35.0% |
| CCCTAGTATAAAAAGGAGAT+TGG | - | chr4_3:74067332-74067351 | Msa0662160:CDS | 35.0% | |
| !!! | CATCTTTTTTCCCGAATGTA+AGG | + | chr4_3:74067434-74067453 | None:intergenic | 35.0% |
| GAAACTACATAGACAAAGTG+AGG | - | chr4_3:74067457-74067476 | Msa0662160:intron | 35.0% | |
| !! | AGAAGGTTAAAGTGTTGACT+TGG | - | chr4_3:74067651-74067670 | Msa0662160:intron | 35.0% |
| !!! | TTGTTTTGGGACATTTTCCT+TGG | - | chr4_3:74067915-74067934 | Msa0662160:intron | 35.0% |
| !!! | TGTTTTGGGACATTTTCCTT+GGG | - | chr4_3:74067916-74067935 | Msa0662160:intron | 35.0% |
| TGTGAGTCAATTTAGTCCCT+AGG | + | chr4_3:74066160-74066179 | None:intergenic | 40.0% | |
| AAGTTACGTAACAACAGCCT+AGG | + | chr4_3:74066187-74066206 | None:intergenic | 40.0% | |
| ATTCTTTCGTGCAATTCGTG+GGG | + | chr4_3:74066273-74066292 | None:intergenic | 40.0% | |
| CATTCTTTCGTGCAATTCGT+GGG | + | chr4_3:74066274-74066293 | None:intergenic | 40.0% | |
| TCATTCTTTCGTGCAATTCG+TGG | + | chr4_3:74066275-74066294 | None:intergenic | 40.0% | |
| TATATGGAAGAGACAATCGC+GGG | - | chr4_3:74066363-74066382 | Msa0662160:CDS | 40.0% | |
| AAAAGAGGCAGTAGCAGAAA+CGG | + | chr4_3:74066518-74066537 | None:intergenic | 40.0% | |
| CTTCAACTGGATGCTAAAAC+TGG | + | chr4_3:74066590-74066609 | None:intergenic | 40.0% | |
| AGAAGAAGAAGAAGAAGAGG+AGG | - | chr4_3:74066810-74066829 | Msa0662160:CDS | 40.0% | |
| GAAGATGATGAACCTAAGGT+TGG | - | chr4_3:74066967-74066986 | Msa0662160:CDS | 40.0% | |
| TACTCACATAGCTTCTTGCA+CGG | + | chr4_3:74067137-74067156 | None:intergenic | 40.0% | |
| TCTATGGTTGTTGAAGCAAG+TGG | - | chr4_3:74067399-74067418 | Msa0662160:intron | 40.0% | |
| ACTACATAGACAAAGTGAGG+CGG | - | chr4_3:74067460-74067479 | Msa0662160:intron | 40.0% | |
| !! | AGGTTAAAGTGTTGACTTGG+AGG | - | chr4_3:74067654-74067673 | Msa0662160:intron | 40.0% |
| !! | TTAAAGTGTTGACTTGGAGG+TGG | - | chr4_3:74067657-74067676 | Msa0662160:intron | 40.0% |
| AAACATACATGCCGGAGTAT+TGG | + | chr4_3:74067696-74067715 | None:intergenic | 40.0% | |
| CACTCGTAAAACATACATGC+CGG | + | chr4_3:74067704-74067723 | None:intergenic | 40.0% | |
| ! | GTATGTTTTACGAGTGGAGT+TGG | - | chr4_3:74067708-74067727 | Msa0662160:intron | 40.0% |
| ATTACCTCAAAAGACACTCC+CGG | + | chr4_3:74067739-74067758 | None:intergenic | 40.0% | |
| GAAACACACATAACCGCAAA+GGG | + | chr4_3:74067773-74067792 | None:intergenic | 40.0% | |
| CTTTGCGGTTATGTGTGTTT+CGG | - | chr4_3:74067772-74067791 | Msa0662160:intron | 40.0% | |
| ! | GGGTGGTATGTTTTCTGTTT+TGG | - | chr4_3:74067800-74067819 | Msa0662160:intron | 40.0% |
| TGTGAGTCAATTTAGTCCCT+AGG | + | chr4_3:74066160-74066179 | None:intergenic | 40.0% | |
| AAGTTACGTAACAACAGCCT+AGG | + | chr4_3:74066187-74066206 | None:intergenic | 40.0% | |
| ATTCTTTCGTGCAATTCGTG+GGG | + | chr4_3:74066273-74066292 | None:intergenic | 40.0% | |
| CATTCTTTCGTGCAATTCGT+GGG | + | chr4_3:74066274-74066293 | None:intergenic | 40.0% | |
| TCATTCTTTCGTGCAATTCG+TGG | + | chr4_3:74066275-74066294 | None:intergenic | 40.0% | |
| TATATGGAAGAGACAATCGC+GGG | - | chr4_3:74066363-74066382 | Msa0662160:CDS | 40.0% | |
| AAAAGAGGCAGTAGCAGAAA+CGG | + | chr4_3:74066518-74066537 | None:intergenic | 40.0% | |
| CTTCAACTGGATGCTAAAAC+TGG | + | chr4_3:74066590-74066609 | None:intergenic | 40.0% | |
| AGAAGAAGAAGAAGAAGAGG+AGG | - | chr4_3:74066810-74066829 | Msa0662160:CDS | 40.0% | |
| GAAGATGATGAACCTAAGGT+TGG | - | chr4_3:74066967-74066986 | Msa0662160:CDS | 40.0% | |
| TACTCACATAGCTTCTTGCA+CGG | + | chr4_3:74067137-74067156 | None:intergenic | 40.0% | |
| TCTATGGTTGTTGAAGCAAG+TGG | - | chr4_3:74067399-74067418 | Msa0662160:intron | 40.0% | |
| ACTACATAGACAAAGTGAGG+CGG | - | chr4_3:74067460-74067479 | Msa0662160:intron | 40.0% | |
| !! | AGGTTAAAGTGTTGACTTGG+AGG | - | chr4_3:74067654-74067673 | Msa0662160:intron | 40.0% |
| !! | TTAAAGTGTTGACTTGGAGG+TGG | - | chr4_3:74067657-74067676 | Msa0662160:intron | 40.0% |
| AAACATACATGCCGGAGTAT+TGG | + | chr4_3:74067696-74067715 | None:intergenic | 40.0% | |
| CACTCGTAAAACATACATGC+CGG | + | chr4_3:74067704-74067723 | None:intergenic | 40.0% | |
| ! | GTATGTTTTACGAGTGGAGT+TGG | - | chr4_3:74067708-74067727 | Msa0662160:intron | 40.0% |
| ATTACCTCAAAAGACACTCC+CGG | + | chr4_3:74067739-74067758 | None:intergenic | 40.0% | |
| GAAACACACATAACCGCAAA+GGG | + | chr4_3:74067773-74067792 | None:intergenic | 40.0% | |
| CTTTGCGGTTATGTGTGTTT+CGG | - | chr4_3:74067772-74067791 | Msa0662160:intron | 40.0% | |
| ! | GGGTGGTATGTTTTCTGTTT+TGG | - | chr4_3:74067800-74067819 | Msa0662160:intron | 40.0% |
| !!! | CGGGCACACGTTTTGATTTT+GGG | - | chr4_3:74066382-74066401 | Msa0662160:CDS | 45.0% |
| GCAGAAACGGCAATGAATGT+TGG | + | chr4_3:74066505-74066524 | None:intergenic | 45.0% | |
| AGAAGAAGAAGAAGAGGAGG+AGG | - | chr4_3:74066813-74066832 | Msa0662160:CDS | 45.0% | |
| GGAAGAGGGTGAAAATTGTG+AGG | - | chr4_3:74066927-74066946 | Msa0662160:CDS | 45.0% | |
| TGGAGGTTAATGACCAAGCT+TGG | - | chr4_3:74067352-74067371 | Msa0662160:intron | 45.0% | |
| CTGCTTATGGGATGAGTTAG+TGG | - | chr4_3:74067628-74067647 | Msa0662160:intron | 45.0% | |
| ATGGGATGAGTTAGTGGAGA+AGG | - | chr4_3:74067634-74067653 | Msa0662160:intron | 45.0% | |
| !! | TTGACTTGGAGGTGGTTGTT+CGG | - | chr4_3:74067665-74067684 | Msa0662160:intron | 45.0% |
| GTTCGGAAGATCCAATACTC+CGG | - | chr4_3:74067682-74067701 | Msa0662160:intron | 45.0% | |
| ! | CGGCATGTATGTTTTACGAG+TGG | - | chr4_3:74067702-74067721 | Msa0662160:intron | 45.0% |
| TTACCTCAAAAGACACTCCC+GGG | + | chr4_3:74067738-74067757 | None:intergenic | 45.0% | |
| !!! | GGGAGTGTCTTTTGAGGTAA+TGG | - | chr4_3:74067738-74067757 | Msa0662160:intron | 45.0% |
| CGAAACACACATAACCGCAA+AGG | + | chr4_3:74067774-74067793 | None:intergenic | 45.0% | |
| GTTATGTGTGTTTCGGCTGT+GGG | - | chr4_3:74067779-74067798 | Msa0662160:intron | 45.0% | |
| TTATGTGTGTTTCGGCTGTG+GGG | - | chr4_3:74067780-74067799 | Msa0662160:intron | 45.0% | |
| !! | TTTGGGACATTTTCCTTGGG+CGG | - | chr4_3:74067919-74067938 | Msa0662160:intron | 45.0% |
| ! | ACATTTTCCTTGGGCGGTTT+TGG | - | chr4_3:74067925-74067944 | Msa0662160:intron | 45.0% |
| ! | CATTTTCCTTGGGCGGTTTT+GGG | - | chr4_3:74067926-74067945 | Msa0662160:intron | 45.0% |
| !!! | CGGGCACACGTTTTGATTTT+GGG | - | chr4_3:74066382-74066401 | Msa0662160:CDS | 45.0% |
| GCAGAAACGGCAATGAATGT+TGG | + | chr4_3:74066505-74066524 | None:intergenic | 45.0% | |
| AGAAGAAGAAGAAGAGGAGG+AGG | - | chr4_3:74066813-74066832 | Msa0662160:CDS | 45.0% | |
| GGAAGAGGGTGAAAATTGTG+AGG | - | chr4_3:74066927-74066946 | Msa0662160:CDS | 45.0% | |
| TGGAGGTTAATGACCAAGCT+TGG | - | chr4_3:74067352-74067371 | Msa0662160:intron | 45.0% | |
| CTGCTTATGGGATGAGTTAG+TGG | - | chr4_3:74067628-74067647 | Msa0662160:intron | 45.0% | |
| ATGGGATGAGTTAGTGGAGA+AGG | - | chr4_3:74067634-74067653 | Msa0662160:intron | 45.0% | |
| !! | TTGACTTGGAGGTGGTTGTT+CGG | - | chr4_3:74067665-74067684 | Msa0662160:intron | 45.0% |
| GTTCGGAAGATCCAATACTC+CGG | - | chr4_3:74067682-74067701 | Msa0662160:intron | 45.0% | |
| ! | CGGCATGTATGTTTTACGAG+TGG | - | chr4_3:74067702-74067721 | Msa0662160:intron | 45.0% |
| TTACCTCAAAAGACACTCCC+GGG | + | chr4_3:74067738-74067757 | None:intergenic | 45.0% | |
| !!! | GGGAGTGTCTTTTGAGGTAA+TGG | - | chr4_3:74067738-74067757 | Msa0662160:intron | 45.0% |
| CGAAACACACATAACCGCAA+AGG | + | chr4_3:74067774-74067793 | None:intergenic | 45.0% | |
| GTTATGTGTGTTTCGGCTGT+GGG | - | chr4_3:74067779-74067798 | Msa0662160:intron | 45.0% | |
| TTATGTGTGTTTCGGCTGTG+GGG | - | chr4_3:74067780-74067799 | Msa0662160:intron | 45.0% | |
| !! | TTTGGGACATTTTCCTTGGG+CGG | - | chr4_3:74067919-74067938 | Msa0662160:intron | 45.0% |
| ! | ACATTTTCCTTGGGCGGTTT+TGG | - | chr4_3:74067925-74067944 | Msa0662160:intron | 45.0% |
| ! | CATTTTCCTTGGGCGGTTTT+GGG | - | chr4_3:74067926-74067945 | Msa0662160:intron | 45.0% |
| !! | ATCAAAAAAATAATATAAAA+AGG | + | chr4_3:74066318-74066337 | None:intergenic | 5.0% |
| !! | ATCAAAAAAATAATATAAAA+AGG | + | chr4_3:74066318-74066337 | None:intergenic | 5.0% |
| !!! | GCGGGCACACGTTTTGATTT+TGG | - | chr4_3:74066381-74066400 | Msa0662160:CDS | 50.0% |
| AGAAGAAGAAGAGGAGGAGG+AGG | - | chr4_3:74066816-74066835 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| GAGGAAGAGGAAGAGGAAGA+GGG | - | chr4_3:74066835-74066854 | Msa0662160:CDS | 50.0% | |
| TTTGGGCAGATGCGAGATGT+AGG | - | chr4_3:74067604-74067623 | Msa0662160:intron | 50.0% | |
| TTGGGCAGATGCGAGATGTA+GGG | - | chr4_3:74067605-74067624 | Msa0662160:intron | 50.0% | |
| CGAGATGTAGGGCTGCTTAT+GGG | - | chr4_3:74067616-74067635 | Msa0662160:intron | 50.0% | |
| TACCTCAAAAGACACTCCCG+GGG | + | chr4_3:74067737-74067756 | None:intergenic | 50.0% | |
| !! | ATGGTGTTGCTGTCCCTTTG+CGG | - | chr4_3:74067757-74067776 | Msa0662160:intron | 50.0% |
| GGTTATGTGTGTTTCGGCTG+TGG | - | chr4_3:74067778-74067797 | Msa0662160:intron | 50.0% | |
| !!! | GCGGGCACACGTTTTGATTT+TGG | - | chr4_3:74066381-74066400 | Msa0662160:CDS | 50.0% |
| AGAAGAAGAAGAGGAGGAGG+AGG | - | chr4_3:74066816-74066835 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066840-74066859 | Msa0662160:CDS | 50.0% | |
| GAGGAAGAGGAAGAGGAAGA+GGG | - | chr4_3:74066835-74066854 | Msa0662160:CDS | 50.0% | |
| TTTGGGCAGATGCGAGATGT+AGG | - | chr4_3:74067604-74067623 | Msa0662160:intron | 50.0% | |
| TTGGGCAGATGCGAGATGTA+GGG | - | chr4_3:74067605-74067624 | Msa0662160:intron | 50.0% | |
| CGAGATGTAGGGCTGCTTAT+GGG | - | chr4_3:74067616-74067635 | Msa0662160:intron | 50.0% | |
| TACCTCAAAAGACACTCCCG+GGG | + | chr4_3:74067737-74067756 | None:intergenic | 50.0% | |
| !! | ATGGTGTTGCTGTCCCTTTG+CGG | - | chr4_3:74067757-74067776 | Msa0662160:intron | 50.0% |
| GGTTATGTGTGTTTCGGCTG+TGG | - | chr4_3:74067778-74067797 | Msa0662160:intron | 50.0% | |
| AGAAGAGGAGGAGGAGGAAG+AGG | - | chr4_3:74066822-74066841 | Msa0662160:CDS | 55.0% | |
| GGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066834-74066853 | Msa0662160:CDS | 55.0% | |
| AAAGTGAGGCGGCTTCGACT+TGG | - | chr4_3:74067471-74067490 | Msa0662160:intron | 55.0% | |
| AAGTGAGGCGGCTTCGACTT+GGG | - | chr4_3:74067472-74067491 | Msa0662160:intron | 55.0% | |
| GCGAGATGTAGGGCTGCTTA+TGG | - | chr4_3:74067615-74067634 | Msa0662160:intron | 55.0% | |
| CATGACAGAACAGCAGCCAC+TGG | - | chr4_3:74067832-74067851 | Msa0662160:intron | 55.0% | |
| ! | GCAGGCTGGTTGTTGCTGTT+CGG | - | chr4_3:74067875-74067894 | Msa0662160:intron | 55.0% |
| ! | CAGGCTGGTTGTTGCTGTTC+GGG | - | chr4_3:74067876-74067895 | Msa0662160:intron | 55.0% |
| !!! | TTCCTTGGGCGGTTTTGGGT+TGG | - | chr4_3:74067930-74067949 | Msa0662160:intron | 55.0% |
| AGAAGAGGAGGAGGAGGAAG+AGG | - | chr4_3:74066822-74066841 | Msa0662160:CDS | 55.0% | |
| GGAGGAAGAGGAAGAGGAAG+AGG | - | chr4_3:74066834-74066853 | Msa0662160:CDS | 55.0% | |
| AAAGTGAGGCGGCTTCGACT+TGG | - | chr4_3:74067471-74067490 | Msa0662160:intron | 55.0% | |
| AAGTGAGGCGGCTTCGACTT+GGG | - | chr4_3:74067472-74067491 | Msa0662160:intron | 55.0% | |
| GCGAGATGTAGGGCTGCTTA+TGG | - | chr4_3:74067615-74067634 | Msa0662160:intron | 55.0% | |
| CATGACAGAACAGCAGCCAC+TGG | - | chr4_3:74067832-74067851 | Msa0662160:intron | 55.0% | |
| ! | GCAGGCTGGTTGTTGCTGTT+CGG | - | chr4_3:74067875-74067894 | Msa0662160:intron | 55.0% |
| ! | CAGGCTGGTTGTTGCTGTTC+GGG | - | chr4_3:74067876-74067895 | Msa0662160:intron | 55.0% |
| !!! | TTCCTTGGGCGGTTTTGGGT+TGG | - | chr4_3:74067930-74067949 | Msa0662160:intron | 55.0% |
| GGAGGAGGAGGAAGAGGAAG+AGG | - | chr4_3:74066828-74066847 | Msa0662160:CDS | 60.0% | |
| !! | AGGCGGCTTCGACTTGGGAT+AGG | - | chr4_3:74067477-74067496 | Msa0662160:intron | 60.0% |
| !! | ACGAGTGGAGTTGGTGTCCC+CGG | - | chr4_3:74067717-74067736 | Msa0662160:intron | 60.0% |
| !!! | GTCCCCGGGAGTGTCTTTTG+AGG | - | chr4_3:74067732-74067751 | Msa0662160:intron | 60.0% |
| TGTGTGTTTCGGCTGTGGGG+TGG | - | chr4_3:74067783-74067802 | Msa0662160:intron | 60.0% | |
| CAGGCAGAAAGCAGCACCAG+TGG | + | chr4_3:74067851-74067870 | None:intergenic | 60.0% | |
| TGCCAACCCAAAACCGCCCA+AGG | + | chr4_3:74067935-74067954 | None:intergenic | 60.0% | |
| GGAGGAGGAGGAAGAGGAAG+AGG | - | chr4_3:74066828-74066847 | Msa0662160:CDS | 60.0% | |
| !! | AGGCGGCTTCGACTTGGGAT+AGG | - | chr4_3:74067477-74067496 | Msa0662160:intron | 60.0% |
| !! | ACGAGTGGAGTTGGTGTCCC+CGG | - | chr4_3:74067717-74067736 | Msa0662160:intron | 60.0% |
| !!! | GTCCCCGGGAGTGTCTTTTG+AGG | - | chr4_3:74067732-74067751 | Msa0662160:intron | 60.0% |
| TGTGTGTTTCGGCTGTGGGG+TGG | - | chr4_3:74067783-74067802 | Msa0662160:intron | 60.0% | |
| CAGGCAGAAAGCAGCACCAG+TGG | + | chr4_3:74067851-74067870 | None:intergenic | 60.0% | |
| TGCCAACCCAAAACCGCCCA+AGG | + | chr4_3:74067935-74067954 | None:intergenic | 60.0% | |
| !! | CGAGTGGAGTTGGTGTCCCC+GGG | - | chr4_3:74067718-74067737 | Msa0662160:intron | 65.0% |
| CTGCTTTCTGCCTGCTGCGC+AGG | - | chr4_3:74067857-74067876 | Msa0662160:intron | 65.0% | |
| TTTCTGCCTGCTGCGCAGGC+TGG | - | chr4_3:74067861-74067880 | Msa0662160:intron | 65.0% | |
| CAACAACCAGCCTGCGCAGC+AGG | + | chr4_3:74067870-74067889 | None:intergenic | 65.0% | |
| !! | CGAGTGGAGTTGGTGTCCCC+GGG | - | chr4_3:74067718-74067737 | Msa0662160:intron | 65.0% |
| CTGCTTTCTGCCTGCTGCGC+AGG | - | chr4_3:74067857-74067876 | Msa0662160:intron | 65.0% | |
| TTTCTGCCTGCTGCGCAGGC+TGG | - | chr4_3:74067861-74067880 | Msa0662160:intron | 65.0% | |
| CAACAACCAGCCTGCGCAGC+AGG | + | chr4_3:74067870-74067889 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 74066081 | 74067957 | 74066081 | ID=Msa0662160;Name=Msa0662160 |
| chr4_3 | mRNA | 74066081 | 74067957 | 74066081 | ID=Msa0662160-mRNA-1;Parent=Msa0662160;Name=Msa0662160-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0|0|0.5|1|1|4|0|369 |
| chr4_3 | exon | 74067937 | 74067957 | 74067937 | ID=Msa0662160-mRNA-1:exon:22323;Parent=Msa0662160-mRNA-1 |
| chr4_3 | exon | 74066511 | 74067353 | 74066511 | ID=Msa0662160-mRNA-1:exon:22322;Parent=Msa0662160-mRNA-1 |
| chr4_3 | exon | 74066285 | 74066412 | 74066285 | ID=Msa0662160-mRNA-1:exon:22321;Parent=Msa0662160-mRNA-1 |
| chr4_3 | exon | 74066081 | 74066198 | 74066081 | ID=Msa0662160-mRNA-1:exon:22320;Parent=Msa0662160-mRNA-1 |
| chr4_3 | CDS | 74067937 | 74067957 | 74067937 | ID=Msa0662160-mRNA-1:cds;Parent=Msa0662160-mRNA-1 |
| chr4_3 | CDS | 74066511 | 74067353 | 74066511 | ID=Msa0662160-mRNA-1:cds;Parent=Msa0662160-mRNA-1 |
| chr4_3 | CDS | 74066285 | 74066412 | 74066285 | ID=Msa0662160-mRNA-1:cds;Parent=Msa0662160-mRNA-1 |
| chr4_3 | CDS | 74066081 | 74066198 | 74066081 | ID=Msa0662160-mRNA-1:cds;Parent=Msa0662160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
