Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0828750 | A0A6A4SCG9 | 75.362 | 276 | 68 | 0 | 265 | 540 | 14 | 289 | 1.67e-16 | 93.2 |
Msa0828750 | A0A6A4SCG9 | 90.308 | 227 | 22 | 0 | 364 | 590 | 70 | 296 | 1.20e-16 | 93.6 |
Msa0828750 | A0A6A4SCG9 | 91.593 | 226 | 19 | 0 | 361 | 586 | 70 | 295 | 2.83e-15 | 89.4 |
Msa0828750 | A0A6A4SCG9 | 92.035 | 226 | 18 | 0 | 360 | 585 | 70 | 295 | 2.48e-15 | 89.7 |
Msa0828750 | A0A6A4SCG9 | 92.793 | 222 | 16 | 0 | 320 | 541 | 68 | 289 | 7.48e-16 | 91.3 |
Msa0828750 | A0A6A4SCG9 | 92.793 | 222 | 16 | 0 | 321 | 542 | 68 | 289 | 1.47e-15 | 90.1 |
Msa0828750 | A0A6A4SCG9 | 93.722 | 223 | 14 | 0 | 322 | 544 | 67 | 289 | 2.52e-16 | 92.4 |
Msa0828750 | A0A6A4SCG9 | 94.595 | 222 | 12 | 0 | 324 | 545 | 68 | 289 | 2.32e-16 | 92.8 |
Msa0828750 | A0A6A4SCG9 | 94.690 | 226 | 12 | 0 | 354 | 579 | 70 | 295 | 4.10e-16 | 92.0 |
Msa0828750 | A0A6A4SCG9 | 95.045 | 222 | 11 | 0 | 325 | 546 | 68 | 289 | 1.78e-16 | 93.2 |
Msa0828750 | A0A6A4SCG9 | 95.495 | 222 | 10 | 0 | 326 | 547 | 68 | 289 | 1.37e-16 | 93.2 |
Msa0828750 | A0A6A4SCG9 | 95.575 | 226 | 10 | 0 | 352 | 577 | 70 | 295 | 2.15e-16 | 92.8 |
Msa0828750 | A0A6A4SCG9 | 95.946 | 222 | 9 | 0 | 327 | 548 | 68 | 289 | 1.05e-16 | 93.6 |
Msa0828750 | A0A6A4SCG9 | 96.396 | 222 | 8 | 0 | 328 | 549 | 68 | 289 | 8.10e-17 | 94.0 |
Msa0828750 | A0A6A4SCG9 | 96.847 | 222 | 7 | 0 | 329 | 550 | 68 | 289 | 6.22e-17 | 94.4 |
Msa0828750 | A0A6A4SCG9 | 97.758 | 223 | 5 | 0 | 331 | 553 | 68 | 290 | 1.47e-18 | 99.0 |
Msa0828750 | A0A6A4SCG9 | 98.198 | 222 | 4 | 0 | 333 | 554 | 68 | 289 | 3.32e-17 | 95.1 |
Msa0828750 | A0A6A4SCG9 | 98.636 | 220 | 3 | 0 | 337 | 556 | 70 | 289 | 1.76e-16 | 93.2 |
Msa0828750 | A0A6A4SCG9 | 98.636 | 220 | 3 | 0 | 338 | 557 | 70 | 289 | 1.76e-16 | 93.2 |
Msa0828750 | A0A6A4SCG9 | 98.636 | 220 | 3 | 0 | 339 | 558 | 70 | 289 | 1.76e-16 | 93.2 |
Msa0828750 | A0A6A4SCG9 | 98.636 | 220 | 3 | 0 | 340 | 559 | 70 | 289 | 1.76e-16 | 93.2 |
Msa0828750 | A0A6A4SCG9 | 98.636 | 220 | 3 | 0 | 341 | 560 | 70 | 289 | 1.76e-16 | 93.2 |
Msa0828750 | A0A6A4SCG9 | 98.636 | 220 | 3 | 0 | 342 | 561 | 70 | 289 | 1.76e-16 | 93.2 |
Msa0828750 | A0A6A4SCG9 | 98.636 | 220 | 3 | 0 | 343 | 562 | 70 | 289 | 1.76e-16 | 93.2 |
Msa0828750 | A0A6A4SCG9 | 98.636 | 220 | 3 | 0 | 344 | 563 | 70 | 289 | 1.76e-16 | 93.2 |
Msa0828750 | A0A6A4SCG9 | 98.636 | 220 | 3 | 0 | 345 | 564 | 70 | 289 | 1.76e-16 | 93.2 |
Msa0828750 | A0A6A4SCG9 | 98.636 | 220 | 3 | 0 | 346 | 565 | 70 | 289 | 1.76e-16 | 93.2 |
Msa0828750 | A0A6A4SCG9 | 98.636 | 220 | 3 | 0 | 347 | 566 | 70 | 289 | 1.76e-16 | 93.2 |
Msa0828750 | A0A6A4SCG9 | 98.636 | 220 | 3 | 0 | 348 | 567 | 70 | 289 | 1.76e-16 | 93.2 |
Msa0828750 | A0A6A4SCG9 | 98.636 | 220 | 3 | 0 | 349 | 568 | 70 | 289 | 1.76e-16 | 93.2 |
Msa0828750 | A0A6A4SCG9 | 98.636 | 220 | 3 | 0 | 350 | 569 | 70 | 289 | 1.76e-16 | 93.2 |
Msa0828750 | A0A6A4SCG9 | 98.649 | 222 | 3 | 0 | 334 | 555 | 68 | 289 | 2.55e-17 | 95.5 |
Gene ID | Type | Classification |
---|---|---|
Msa0828750 | TF | FAR1 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0662160 | Msa0828750 | 0.941760 | 2.369010e-101 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0828750 | MtrunA17_Chr2g0296781 | 69.591 | 171 | 45 | 7 | 1244 | 1411 | 8 | 174 | 4.40e-63 | 230 |
Msa0828750 | MtrunA17_Chr1g0196541 | 53.073 | 179 | 63 | 8 | 1243 | 1411 | 7 | 174 | 1.21e-34 | 143 |
Msa0828750 | MtrunA17_Chr6g0476431 | 60.000 | 85 | 28 | 3 | 1233 | 1316 | 1 | 80 | 1.44e-23 | 96.3 |
Msa0828750 | MtrunA17_Chr6g0477261 | 79.365 | 63 | 11 | 2 | 1350 | 1411 | 2 | 63 | 6.11e-22 | 102 |
Msa0828750 | MtrunA17_Chr5g0409511 | 78.049 | 41 | 9 | 0 | 1414 | 1454 | 15 | 55 | 2.57e-19 | 82.8 |
Msa0828750 | MtrunA17_Chr6g0479711 | 64.286 | 42 | 9 | 2 | 1416 | 1454 | 62 | 100 | 2.56e-11 | 61.6 |
Msa0828750 | MtrunA17_Chr4g0051451 | 69.048 | 42 | 9 | 2 | 1415 | 1454 | 2 | 41 | 5.12e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 251 sgRNAs with CRISPR-Local
Find 374 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAACAACCAGCCTGCGCAGC+AGG | 0.259646 | 5_4:+1669748 | None:intergenic |
TATGCTAGATGTATAGGTTT+TGG | 0.261658 | 5_4:-1670567 | Msa0828750:CDS |
GGAGGAAGAGGAGGAGGAGG+AGG | 0.262685 | 5_4:-1672707 | Msa0828750:CDS |
GGAGGAAGAGGAGGAGGAGG+AGG | 0.262685 | 5_4:-1673196 | Msa0828750:CDS |
GGAGGAAGAGGAGGAGGAGG+AGG | 0.262685 | 5_4:-1673461 | Msa0828750:CDS |
GGAGGACGAGGAGGAGGAGG+AGG | 0.263710 | 5_4:-1672668 | Msa0828750:CDS |
GGAGGAGGAGGACGAGGAGG+AGG | 0.263710 | 5_4:-1672674 | Msa0828750:CDS |
GGAGGAGGAGGACGAGGAGG+AGG | 0.263710 | 5_4:-1673172 | Msa0828750:CDS |
CAGGCTGGTTGTTGCTGTTC+GGG | 0.264478 | 5_4:-1669739 | Msa0828750:CDS |
CTGCTTTCTGCCTGCTGCGC+AGG | 0.264898 | 5_4:-1669758 | Msa0828750:CDS |
GGAGGAGGACGAGGAGGAGG+AGG | 0.278997 | 5_4:-1672671 | Msa0828750:CDS |
GGAGGAGGACGAGGAGGAGG+AGG | 0.278997 | 5_4:-1673169 | Msa0828750:CDS |
AAGAATTATGCTAGATGTAT+AGG | 0.283443 | 5_4:-1670573 | Msa0828750:CDS |
GGAGGAGGAGGAAGAGGAGG+AGG | 0.292157 | 5_4:-1672887 | Msa0828750:CDS |
GGAGGAGGAGGAAGAGGAGG+AGG | 0.292157 | 5_4:-1672905 | Msa0828750:CDS |
GGAGGAGGAGGAAGAGGAGG+AGG | 0.292157 | 5_4:-1673446 | Msa0828750:CDS |
GGAGGAGGAGGAAGAGGAGG+AGG | 0.292157 | 5_4:-1673467 | Msa0828750:CDS |
GGAGGAGGAAGAGGAGGAGG+AGG | 0.293981 | 5_4:-1672884 | Msa0828750:CDS |
GGAGGAGGAAGAGGAGGAGG+AGG | 0.293981 | 5_4:-1672902 | Msa0828750:CDS |
GGAGGAGGAAGAGGAGGAGG+AGG | 0.293981 | 5_4:-1673443 | Msa0828750:CDS |
GGAGGAGGAAGAGGAGGAGG+AGG | 0.293981 | 5_4:-1673464 | Msa0828750:CDS |
TGGAACAATTACTATTTCTA+AGG | 0.295449 | 5_4:-1670379 | Msa0828750:CDS |
TCTGTTGTTACTGTTTGTTT+TGG | 0.309542 | 5_4:-1669714 | Msa0828750:CDS |
GCGAGATGTAGGGCTGCTTA+TGG | 0.310927 | 5_4:-1670000 | Msa0828750:intron |
AGAGGAAGAGGAGGAGGAAG+AGG | 0.319434 | 5_4:-1672995 | Msa0828750:CDS |
AGAGGAAGAGGAGGAGGAAG+AGG | 0.319434 | 5_4:-1673557 | Msa0828750:CDS |
AGAGGAAGAGGAGGAGGAAG+AGG | 0.319434 | 5_4:-1673599 | Msa0828750:CDS |
AGAGGAAGAGGAGGAGGAAG+AGG | 0.319434 | 5_4:-1673725 | Msa0828750:CDS |
GGAAGAAGAGGAGGAGGAAG+AGG | 0.321085 | 5_4:-1672719 | Msa0828750:CDS |
GGAGGAAGAGGAGGAGGAAG+AGG | 0.321085 | 5_4:-1672929 | Msa0828750:CDS |
GGAGGAAGAGGAGGAGGAAG+AGG | 0.321085 | 5_4:-1672941 | Msa0828750:CDS |
GGAGGAAGAGGAGGAGGAAG+AGG | 0.321085 | 5_4:-1672983 | Msa0828750:CDS |
GGAGGAAGAGGAGGAGGAAG+AGG | 0.321085 | 5_4:-1673208 | Msa0828750:CDS |
GGAGGAAGAGGAGGAGGAAG+AGG | 0.321085 | 5_4:-1673220 | Msa0828750:CDS |
GGAAGAAGAGGAGGAGGAAG+AGG | 0.321085 | 5_4:-1673232 | Msa0828750:CDS |
GGAGGAAGAGGAGGAGGAAG+AGG | 0.321085 | 5_4:-1673497 | Msa0828750:CDS |
GGAGGAAGAGGAGGAGGAAG+AGG | 0.321085 | 5_4:-1673713 | Msa0828750:CDS |
GGAGGAAGAGGAGGAGGAAG+AGG | 0.321085 | 5_4:-1673926 | Msa0828750:CDS |
AGAGGAAGAGGAGGAGGAGG+AGG | 0.325244 | 5_4:-1673479 | Msa0828750:CDS |
AGAGGAAGAGGAGGAGGAGG+AGG | 0.325244 | 5_4:-1673515 | Msa0828750:CDS |
GGAGGAAGAGGAGGAGGAGG+AGG | 0.326894 | 5_4:-1672881 | Msa0828750:CDS |
GGAGGAAGAGGAGGAGGAGG+AGG | 0.326894 | 5_4:-1672899 | Msa0828750:CDS |
GGAGGAAGAGGAGGAGGAGG+AGG | 0.326894 | 5_4:-1672917 | Msa0828750:CDS |
GGAGGAAGAGGAGGAGGAGG+AGG | 0.326894 | 5_4:-1673440 | Msa0828750:CDS |
TTTCTGCCTGCTGCGCAGGC+TGG | 0.331640 | 5_4:-1669754 | Msa0828750:CDS |
GGAGGAGGAGGACGAGGAAG+AGG | 0.332863 | 5_4:-1673154 | Msa0828750:CDS |
GGAGGAGGAGGAAGAGGAAG+AGG | 0.337961 | 5_4:-1672650 | Msa0828750:CDS |
GGAGGAGGAGGAAGAGGAAG+AGG | 0.337961 | 5_4:-1672869 | Msa0828750:CDS |
GGAGGAGGAGGAAGAGGAAG+AGG | 0.337961 | 5_4:-1673428 | Msa0828750:CDS |
GCAGGCTGGTTGTTGCTGTT+CGG | 0.342764 | 5_4:-1669740 | Msa0828750:CDS |
AGAGGAGGAGGAAGAGGAAG+AGG | 0.344008 | 5_4:-1673491 | Msa0828750:CDS |
CGAGGAAGAGGAGGAGGAAG+AGG | 0.344146 | 5_4:-1673142 | Msa0828750:CDS |
ATATAGACCCTAGTATAAAA+AGG | 0.351811 | 5_4:-1670290 | Msa0828750:CDS |
AGAGGAAGAGGAGGAGGAAG+AGG | 0.353375 | 5_4:-1672857 | Msa0828750:CDS |
AGAGGAAGAGGAGGAGGAAG+AGG | 0.353375 | 5_4:-1672953 | Msa0828750:CDS |
AGAGGAAGAGGAGGAGGAAG+AGG | 0.353375 | 5_4:-1673416 | Msa0828750:CDS |
GGAAGAAGAGGAGGAGGAAG+AGG | 0.355026 | 5_4:-1673533 | Msa0828750:CDS |
GGAAGAAGAGGAGGAGGAAG+AGG | 0.355026 | 5_4:-1673575 | Msa0828750:CDS |
GGAGGAAGAGGAAGAGGAGG+AGG | 0.356366 | 5_4:-1672863 | Msa0828750:CDS |
GGAGGAAGAGGAAGAGGAGG+AGG | 0.356366 | 5_4:-1673422 | Msa0828750:CDS |
GGAGGAAGAGGAAGAGGAGG+AGG | 0.356366 | 5_4:-1673485 | Msa0828750:CDS |
GGAGGAGGAGGAAGAGGAGG+AGG | 0.356366 | 5_4:-1673503 | Msa0828750:CDS |
GGAGGAAGAGGAAGAGGAGG+AGG | 0.356366 | 5_4:-1673521 | Msa0828750:CDS |
GGAGGAAGAGGAAGAGGAGG+AGG | 0.356366 | 5_4:-1673563 | Msa0828750:CDS |
GGAAGAGGAGGAAGAGGAGG+AGG | 0.356366 | 5_4:-1673932 | Msa0828750:CDS |
GGAGGAGGAAGAGGAGGAGG+AGG | 0.358190 | 5_4:-1672710 | Msa0828750:CDS |
GGAGGAGGAAGAGGAGGAGG+AGG | 0.358190 | 5_4:-1672920 | Msa0828750:CDS |
GGAGGAGGAAGAGGAGGAGG+AGG | 0.358190 | 5_4:-1673199 | Msa0828750:CDS |
GGAAGAGGAAGAGGAGGAGG+AGG | 0.358190 | 5_4:-1673482 | Msa0828750:CDS |
GGAAGAGGAAGAGGAGGAGG+AGG | 0.358190 | 5_4:-1673518 | Msa0828750:CDS |
AGAGGAGGAGGAAGAGGAGG+AGG | 0.362413 | 5_4:-1672713 | Msa0828750:CDS |
AGAGGAGGAGGAAGAGGAGG+AGG | 0.362413 | 5_4:-1672923 | Msa0828750:CDS |
AGAGGAGGAGGAAGAGGAGG+AGG | 0.362413 | 5_4:-1672935 | Msa0828750:CDS |
AGAGGAGGAGGAAGAGGAGG+AGG | 0.362413 | 5_4:-1672947 | Msa0828750:CDS |
AGAGGAGGAGGAAGAGGAGG+AGG | 0.362413 | 5_4:-1672989 | Msa0828750:CDS |
AGAGGAGGAGGAAGAGGAGG+AGG | 0.362413 | 5_4:-1673202 | Msa0828750:CDS |
AGAGGAGGAGGAAGAGGAGG+AGG | 0.362413 | 5_4:-1673214 | Msa0828750:CDS |
AGAGGAGGAGGAAGAGGAGG+AGG | 0.362413 | 5_4:-1673719 | Msa0828750:CDS |
AGAGGAAGAGGAGGAGGAAG+AGG | 0.364853 | 5_4:-1674242 | Msa0828750:CDS |
TTAAAATATCTTGATTTGCT+TGG | 0.366169 | 5_4:+1670324 | None:intergenic |
GGAGGACGAGGAAGAGGAGG+AGG | 0.368145 | 5_4:-1673148 | Msa0828750:CDS |
AGAAGAAGAGGAGGAGGAAG+AGG | 0.369873 | 5_4:-1673256 | Msa0828750:CDS |
GGAGGAAGAGGAAGAGGAAG+AGG | 0.371902 | 5_4:-1672644 | Msa0828750:CDS |
GGAGGAAGAGGAAGAGGAAG+AGG | 0.371902 | 5_4:-1672845 | Msa0828750:CDS |
GGAGGAAGAGGAAGAGGAAG+AGG | 0.371902 | 5_4:-1673130 | Msa0828750:CDS |
GGAGGAAGAGGAAGAGGAAG+AGG | 0.371902 | 5_4:-1673404 | Msa0828750:CDS |
GGAAGAAGAGGAAGAGGAAG+AGG | 0.371902 | 5_4:-1673677 | Msa0828750:CDS |
AGAGGAGGAAGAGGAGGAAG+AGG | 0.372076 | 5_4:-1673938 | Msa0828750:CDS |
GGAGGAAGAAGAGGAGGAAG+AGG | 0.373726 | 5_4:-1673947 | Msa0828750:CDS |
GGAGGACGAGGAGGAGGAGG+AGG | 0.376602 | 5_4:-1673166 | Msa0828750:CDS |
AGAGGAGGAGGAAGAGGAAG+AGG | 0.377949 | 5_4:-1672851 | Msa0828750:CDS |
AGAAGAGGAGGAAGAGGAAG+AGG | 0.377949 | 5_4:-1673007 | Msa0828750:CDS |
AGAGGAGGAGGAAGAGGAAG+AGG | 0.377949 | 5_4:-1673136 | Msa0828750:CDS |
AGAGGAGGAGGAAGAGGAAG+AGG | 0.377949 | 5_4:-1673410 | Msa0828750:CDS |
AGAGGAGGAGGAAGAGGAAG+AGG | 0.377949 | 5_4:-1673527 | Msa0828750:CDS |
AGAGGAGGAGGAAGAGGAAG+AGG | 0.377949 | 5_4:-1673569 | Msa0828750:CDS |
AGAAGAGGAGGAAGAGGAAG+AGG | 0.377949 | 5_4:-1673737 | Msa0828750:CDS |
AGAGGAGGAAGAAGAGGAAG+AGG | 0.379773 | 5_4:-1672965 | Msa0828750:CDS |
GGAGGAAGAAGAGGAGGAAG+AGG | 0.390224 | 5_4:-1673013 | Msa0828750:CDS |
GGAGGAAGAAGAGGAGGAAG+AGG | 0.390224 | 5_4:-1673743 | Msa0828750:CDS |
GGAGGAAGAAGAGGAGGAAG+AGG | 0.390224 | 5_4:-1673998 | Msa0828750:CDS |
AGAGGAAGAGGAAGAGGAAG+AGG | 0.394447 | 5_4:-1672609 | Msa0828750:CDS |
AAGAGAAGAGGAAGAGGAAG+AGG | 0.394447 | 5_4:-1672615 | Msa0828750:CDS |
AGAGGAAGAGGAAGAGGAAG+AGG | 0.394447 | 5_4:-1672638 | Msa0828750:CDS |
AGAAGAAGAGGAAGAGGAAG+AGG | 0.394447 | 5_4:-1673611 | Msa0828750:CDS |
AGAAGAGGAGGAAGAGGAAG+AGG | 0.394447 | 5_4:-1673992 | Msa0828750:CDS |
AGAGGAAGAAGAAGAGGAAG+AGG | 0.396271 | 5_4:-1672591 | Msa0828750:CDS |
AGAGGAGGAAGAAGAGGAAG+AGG | 0.396271 | 5_4:-1673683 | Msa0828750:CDS |
AGAAGAGGAAGAAGAGGAAG+AGG | 0.396271 | 5_4:-1674157 | Msa0828750:CDS |
GGAAGAAGAGGAAGAGGAGG+AGG | 0.398803 | 5_4:-1672959 | Msa0828750:CDS |
GGAGGAAGAGGAAGAGGAGG+AGG | 0.398803 | 5_4:-1673001 | Msa0828750:CDS |
GGAGGAAGAGGAAGAGGAGG+AGG | 0.398803 | 5_4:-1673731 | Msa0828750:CDS |
GGAGGAGGAAGAAGAGGAGG+AGG | 0.400627 | 5_4:-1672725 | Msa0828750:CDS |
AGAGGAGGAGGAAGAGGAGG+AGG | 0.404851 | 5_4:-1673226 | Msa0828750:CDS |
AGAGGAGGAAGAAGAGGAGG+AGG | 0.406675 | 5_4:-1673238 | Msa0828750:CDS |
AGAGGAGGAAGAAGAGGAGG+AGG | 0.406675 | 5_4:-1673539 | Msa0828750:CDS |
AGAGGAGGAAGAAGAGGAGG+AGG | 0.406675 | 5_4:-1673581 | Msa0828750:CDS |
GGATATGATAACCTTACATT+CGG | 0.409109 | 5_4:-1670195 | Msa0828750:CDS |
CAGGCAGAAAGCAGCACCAG+TGG | 0.409934 | 5_4:+1669767 | None:intergenic |
ACTATTTCTAAGGTTGCTCT+TGG | 0.411911 | 5_4:-1670369 | Msa0828750:CDS |
GGAGGAAGAGGAGGAAGAAG+AGG | 0.415155 | 5_4:-1673244 | Msa0828750:CDS |
GGAGGAAGAGGAGGAAGAAG+AGG | 0.415155 | 5_4:-1673545 | Msa0828750:CDS |
GGAGGAAGAGGAGGAAGAAG+AGG | 0.415155 | 5_4:-1673587 | Msa0828750:CDS |
GGAGGAAGAGGAGGAAGAAG+AGG | 0.415155 | 5_4:-1673701 | Msa0828750:CDS |
GGAGGAAGAGGAGGAAGAAG+AGG | 0.415155 | 5_4:-1673914 | Msa0828750:CDS |
AGAGGAAGAGGAAGAGGAGG+AGG | 0.421348 | 5_4:-1673605 | Msa0828750:CDS |
AGAGGAAGAGGAAGAGGAGG+AGG | 0.421348 | 5_4:-1673671 | Msa0828750:CDS |
AGAAGAAGAGGAAGAGGAGG+AGG | 0.421348 | 5_4:-1674248 | Msa0828750:CDS |
TTAAATTTCATGCCAACCTT+AGG | 0.424975 | 5_4:+1670636 | None:intergenic |
AAGTGAGGCGGCTTCGACTT+GGG | 0.428800 | 5_4:-1670143 | Msa0828750:CDS |
AAGAGGAAGAGAAGAGGAAG+AGG | 0.428919 | 5_4:-1672621 | Msa0828750:CDS |
AGAGGAAGAAGAGGAAGAAG+AGG | 0.429220 | 5_4:-1674073 | Msa0828750:CDS |
AGAGGAAGAAGAGGAAGAAG+AGG | 0.429220 | 5_4:-1674103 | Msa0828750:CDS |
AGAGGAAGAAGAGGAAGAAG+AGG | 0.429220 | 5_4:-1674163 | Msa0828750:CDS |
GGAGGAGGACGAGGAAGAGG+AGG | 0.431263 | 5_4:-1673151 | Msa0828750:CDS |
CGAGATGTAGGGCTGCTTAT+GGG | 0.435390 | 5_4:-1669999 | Msa0828750:intron |
AGAAGAGGAGGAGGAAGAGG+AGG | 0.437336 | 5_4:-1672716 | Msa0828750:CDS |
AGAAGAGGAGGAGGAAGAGG+AGG | 0.437336 | 5_4:-1673229 | Msa0828750:CDS |
GGAAGAGGAGGAGGAAGAGG+AGG | 0.438987 | 5_4:-1672926 | Msa0828750:CDS |
GGAAGAGGAGGAGGAAGAGG+AGG | 0.438987 | 5_4:-1672938 | Msa0828750:CDS |
GGAAGAGGAGGAGGAAGAGG+AGG | 0.438987 | 5_4:-1672950 | Msa0828750:CDS |
GGAAGAGGAGGAGGAAGAGG+AGG | 0.438987 | 5_4:-1672980 | Msa0828750:CDS |
GGAAGAGGAGGAGGAAGAGG+AGG | 0.438987 | 5_4:-1672992 | Msa0828750:CDS |
GGAAGAGGAGGAGGAAGAGG+AGG | 0.438987 | 5_4:-1673205 | Msa0828750:CDS |
GGAAGAGGAGGAGGAAGAGG+AGG | 0.438987 | 5_4:-1673217 | Msa0828750:CDS |
GGAAGAGGAGGAGGAAGAGG+AGG | 0.438987 | 5_4:-1673710 | Msa0828750:CDS |
GGAAGAGGAGGAGGAAGAGG+AGG | 0.438987 | 5_4:-1673722 | Msa0828750:CDS |
GGAAGAGGAGGAGGAAGAGG+AGG | 0.438987 | 5_4:-1673923 | Msa0828750:CDS |
GGAGGAAGAGGAGGAAGAGG+AGG | 0.438987 | 5_4:-1673935 | Msa0828750:CDS |
TACTTACATTAATCCAAGCT+TGG | 0.439441 | 5_4:+1670250 | None:intergenic |
ACGAGTGGAGTTGGTGTCCC+CGG | 0.443291 | 5_4:-1669898 | Msa0828750:CDS |
TAGCATGAAAACACATTGTA+AGG | 0.444794 | 5_4:-1670430 | Msa0828750:CDS |
TGGAGGTTAATGACCAAGCT+TGG | 0.446409 | 5_4:-1670263 | Msa0828750:CDS |
AAACATACATGCCGGAGTAT+TGG | 0.447153 | 5_4:+1669922 | None:intergenic |
GGAGGAAGAAGAGGAAGAAG+AGG | 0.448264 | 5_4:-1674112 | Msa0828750:CDS |
CTGCTTATGGGATGAGTTAG+TGG | 0.448679 | 5_4:-1669987 | Msa0828750:CDS |
GGAGGAAGAGGAGGAAGAAG+AGG | 0.449096 | 5_4:-1672971 | Msa0828750:CDS |
GGAAGAAGAGGAGGAAGAAG+AGG | 0.449096 | 5_4:-1673022 | Msa0828750:CDS |
GGAAGAAGAGGAGGAAGAAG+AGG | 0.449096 | 5_4:-1673752 | Msa0828750:CDS |
GGAAGAAGAGGAGGAAGAAG+AGG | 0.449096 | 5_4:-1673956 | Msa0828750:CDS |
AGAAGAAGAAGAGGAAGAAG+AGG | 0.455571 | 5_4:-1673800 | Msa0828750:CDS |
AGAAGAAGAAGAGGAAGAAG+AGG | 0.455571 | 5_4:-1674043 | Msa0828750:CDS |
AGAAGAAGAAGAGGAAGAAG+AGG | 0.455571 | 5_4:-1674332 | Msa0828750:CDS |
GGAAGAGGAAGAAGAAGAAG+AGG | 0.457221 | 5_4:-1672830 | Msa0828750:CDS |
GGAAGAAGAAGAGGAAGAAG+AGG | 0.457221 | 5_4:-1673070 | Msa0828750:CDS |
GGAAGAGGAAGAAGAAGAAG+AGG | 0.457221 | 5_4:-1673389 | Msa0828750:CDS |
GGAAGAAGAAGAGGAAGAAG+AGG | 0.457221 | 5_4:-1674082 | Msa0828750:CDS |
GGAAGAGGAAGAAGAAGAAG+AGG | 0.457221 | 5_4:-1674142 | Msa0828750:CDS |
AGAAGAGGAGGAGGAAGAAG+AGG | 0.460077 | 5_4:-1672731 | Msa0828750:CDS |
AGAAGAAGAGGAGGAAGAAG+AGG | 0.460077 | 5_4:-1673034 | Msa0828750:CDS |
AGAAGAAGAGGAGGAAGAAG+AGG | 0.460077 | 5_4:-1673764 | Msa0828750:CDS |
AGAAGAAGAGGAGGAAGAAG+AGG | 0.460077 | 5_4:-1673968 | Msa0828750:CDS |
AGAAGAAGAGGAGGAAGAAG+AGG | 0.460077 | 5_4:-1674007 | Msa0828750:CDS |
GGAAGAAGAGGAGGAAGAAG+AGG | 0.461727 | 5_4:-1673689 | Msa0828750:CDS |
GGAAGAAGAGGAGGAAGAAG+AGG | 0.461727 | 5_4:-1673902 | Msa0828750:CDS |
GGAAGAAGAGGAGGAAGAAG+AGG | 0.461727 | 5_4:-1674121 | Msa0828750:CDS |
AGAGGAGGAAGAGGAAGAGG+AGG | 0.466311 | 5_4:-1673004 | Msa0828750:CDS |
AGAAGAGGAAGAGGAAGAGG+AGG | 0.466311 | 5_4:-1673674 | Msa0828750:CDS |
AGAGGAGGAAGAGGAAGAGG+AGG | 0.466311 | 5_4:-1673734 | Msa0828750:CDS |
AGAAGAAGAAGAGGAAGAAG+AGG | 0.467350 | 5_4:-1674172 | Msa0828750:CDS |
AGAGGAAGAGGAAGAAGAAG+AGG | 0.467774 | 5_4:-1672597 | Msa0828750:CDS |
AGAGGAAGAGGAAGAAGAAG+AGG | 0.467774 | 5_4:-1673118 | Msa0828750:CDS |
AGAGGAAGAGGAAGAAGAAG+AGG | 0.467774 | 5_4:-1673980 | Msa0828750:CDS |
GGAGGAAGAAGAGGAAGAGG+AGG | 0.467961 | 5_4:-1672962 | Msa0828750:CDS |
AGAAGAGGAAGAAGAAGAGG+AGG | 0.469246 | 5_4:-1673043 | Msa0828750:CDS |
AGAAGAGGAAGAAGAAGAGG+AGG | 0.469246 | 5_4:-1673773 | Msa0828750:CDS |
GGAAGAAGAGGAAGAAGAAG+AGG | 0.470684 | 5_4:-1673058 | Msa0828750:CDS |
GGAAGAAGAGGAAGAAGAAG+AGG | 0.470684 | 5_4:-1673788 | Msa0828750:CDS |
GGAAGAAGAGGAAGAAGAAG+AGG | 0.470684 | 5_4:-1674091 | Msa0828750:CDS |
AGAAGAAGAAGAGGAAGAAG+AGG | 0.472965 | 5_4:-1674133 | Msa0828750:CDS |
GGAGGAGGAAGAGGAAGAGG+AGG | 0.475436 | 5_4:-1672866 | Msa0828750:CDS |
GGAGGAGGAAGAGGAAGAGG+AGG | 0.475436 | 5_4:-1673425 | Msa0828750:CDS |
GGAGGAGGAAGAGGAAGAGG+AGG | 0.475436 | 5_4:-1673488 | Msa0828750:CDS |
GGAGGAGGAAGAGGAAGAGG+AGG | 0.475436 | 5_4:-1673524 | Msa0828750:CDS |
GGAGGAGGAAGAGGAAGAGG+AGG | 0.475436 | 5_4:-1673566 | Msa0828750:CDS |
AGAAGAAGAGGAAGAAGAAG+AGG | 0.476731 | 5_4:-1672818 | Msa0828750:CDS |
AGAAGAAGAGGAAGAAGAAG+AGG | 0.476731 | 5_4:-1673079 | Msa0828750:CDS |
AGAAGAAGAGGAAGAAGAAG+AGG | 0.476731 | 5_4:-1673377 | Msa0828750:CDS |
AGAAGAGGAAGAGGAAGAGG+AGG | 0.478942 | 5_4:-1673608 | Msa0828750:CDS |
AGAAGAAGAAGAGGAAGAGG+AGG | 0.478942 | 5_4:-1674251 | Msa0828750:CDS |
GGAAGAGGAAGAAGAAGAGG+AGG | 0.480592 | 5_4:-1673977 | Msa0828750:CDS |
AAGAGGAGAAGAAGAAGAAG+AGG | 0.480675 | 5_4:-1672574 | Msa0828750:CDS |
GGAAGAGGAGGAGGAAGAGG+AGG | 0.481424 | 5_4:-1673554 | Msa0828750:CDS |
GGAAGAGGAGGAGGAAGAGG+AGG | 0.481424 | 5_4:-1673596 | Msa0828750:CDS |
GGAAGAGGAGGAAGAAGAGG+AGG | 0.481424 | 5_4:-1673698 | Msa0828750:CDS |
GGAAGAGGAGGAAGAAGAGG+AGG | 0.481424 | 5_4:-1673911 | Msa0828750:CDS |
GGAAGAAGAGGAGGAAGAGG+AGG | 0.481424 | 5_4:-1673944 | Msa0828750:CDS |
AGAAGAAGAGGAAGAAGAGG+AGG | 0.482709 | 5_4:-1674130 | Msa0828750:CDS |
AGAGGAGGAGGAAGAAGAGG+AGG | 0.487471 | 5_4:-1672728 | Msa0828750:CDS |
GAGGAAGAGGAGGAGGAAGA+GGG | 0.488585 | 5_4:-1674241 | Msa0828750:intron |
GGAAGAGGAGGAAGAAGAGG+AGG | 0.488899 | 5_4:-1673241 | Msa0828750:CDS |
GGAAGAGGAGGAAGAAGAGG+AGG | 0.488899 | 5_4:-1673542 | Msa0828750:CDS |
GGAAGAGGAGGAAGAAGAGG+AGG | 0.488899 | 5_4:-1673584 | Msa0828750:CDS |
AGGTTAAAGTGTTGACTTGG+AGG | 0.490511 | 5_4:-1669961 | Msa0828750:CDS |
AGAAGAGGAGGAGGAAGAGG+AGG | 0.492405 | 5_4:-1673253 | Msa0828750:CDS |
ATGGGATGAGTTAGTGGAGA+AGG | 0.492762 | 5_4:-1669981 | Msa0828750:CDS |
AGAAGAAGAGGAAGAAGAAG+AGG | 0.494125 | 5_4:-1673046 | Msa0828750:CDS |
AGAAGAAGAGGAAGAAGAAG+AGG | 0.494125 | 5_4:-1673776 | Msa0828750:CDS |
GATGAACGAAGAAGAAGAAG+AGG | 0.495953 | 5_4:-1674181 | Msa0828750:intron |
AGAAGAGGAGGAAGAAGAGG+AGG | 0.500102 | 5_4:-1673019 | Msa0828750:CDS |
AGAAGAGGAGGAAGAAGAGG+AGG | 0.500102 | 5_4:-1673031 | Msa0828750:CDS |
AGAAGAGGAGGAAGAAGAGG+AGG | 0.500102 | 5_4:-1673749 | Msa0828750:CDS |
AGAAGAGGAGGAAGAAGAGG+AGG | 0.500102 | 5_4:-1673761 | Msa0828750:CDS |
AGAAGAGGAGGAAGAAGAGG+AGG | 0.500102 | 5_4:-1673953 | Msa0828750:CDS |
AGAAGAGGAGGAAGAAGAGG+AGG | 0.500102 | 5_4:-1673965 | Msa0828750:CDS |
AGAAGAGGAGGAAGAAGAGG+AGG | 0.500102 | 5_4:-1674004 | Msa0828750:CDS |
CGAGTGGAGTTGGTGTCCCC+GGG | 0.504042 | 5_4:-1669897 | Msa0828750:CDS |
AAAGTGAGGCGGCTTCGACT+TGG | 0.512577 | 5_4:-1670144 | Msa0828750:CDS |
TTGACTTGGAGGTGGTTGTT+CGG | 0.529604 | 5_4:-1669950 | Msa0828750:CDS |
AAGAGGAAGAGGAAGAGAAG+AGG | 0.529674 | 5_4:-1672627 | Msa0828750:CDS |
TTACCTCAAAAGACACTCCC+GGG | 0.529717 | 5_4:+1669880 | None:intergenic |
TACTCACATAGCTTCTTGCA+CGG | 0.535718 | 5_4:+1670481 | None:intergenic |
AGAAGGTTAAAGTGTTGACT+TGG | 0.538252 | 5_4:-1669964 | Msa0828750:CDS |
AGGCGGCTTCGACTTGGGAT+AGG | 0.542513 | 5_4:-1670138 | Msa0828750:CDS |
GATATGATAACCTTACATTC+GGG | 0.543620 | 5_4:-1670194 | Msa0828750:CDS |
AAATGAAGATGATGAACCTA+AGG | 0.544931 | 5_4:-1670652 | Msa0828750:CDS |
GAAGATGATGAACCTAAGGT+TGG | 0.554642 | 5_4:-1670648 | Msa0828750:CDS |
TGCCAACCCAAAACCGCCCA+AGG | 0.574248 | 5_4:+1669683 | None:intergenic |
AAGCTTGGATTAATGTAAGT+AGG | 0.576078 | 5_4:-1670248 | Msa0828750:CDS |
ATTACCTCAAAAGACACTCC+CGG | 0.576503 | 5_4:+1669879 | None:intergenic |
CATGACAGAACAGCAGCCAC+TGG | 0.578553 | 5_4:-1669783 | Msa0828750:intron |
CACTCGTAAAACATACATGC+CGG | 0.583300 | 5_4:+1669914 | None:intergenic |
AATGTATGTGTGTCTTCAGA+TGG | 0.584390 | 5_4:-1670399 | Msa0828750:CDS |
TTAAAGTGTTGACTTGGAGG+TGG | 0.605815 | 5_4:-1669958 | Msa0828750:CDS |
GAAACTACATAGACAAAGTG+AGG | 0.617900 | 5_4:-1670158 | Msa0828750:CDS |
AGAAGAGGGTGAAAATTGTG+AGG | 0.627046 | 5_4:-1670688 | Msa0828750:CDS |
GTTCGGAAGATCCAATACTC+CGG | 0.653042 | 5_4:-1669933 | Msa0828750:CDS |
TCTATGGTTGTTGAAGCAAG+TGG | 0.653447 | 5_4:-1670216 | Msa0828750:CDS |
AAAACAAACAGTAACAACAG+AGG | 0.728183 | 5_4:+1669716 | None:intergenic |
TACCTCAAAAGACACTCCCG+GGG | 0.737909 | 5_4:+1669881 | None:intergenic |
ACTACATAGACAAAGTGAGG+CGG | 0.739143 | 5_4:-1670155 | Msa0828750:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAAATAAATAAATATA+TGG | - | chr5_4:1669772-1669791 | Msa0828750:CDS | 0.0% |
!! | AATATAAAAAGGAAATTAGA+TGG | + | chr5_4:1669732-1669751 | None:intergenic | 15.0% |
!!! | AAAAAAAGTATTTTACTCTA+GGG | - | chr5_4:1674010-1674029 | Msa0828750:CDS | 15.0% |
!!! | ACTAACAAAATAATTTTGAA+TGG | + | chr5_4:1674418-1674437 | None:intergenic | 15.0% |
!! | GAAAATCAAATTTCAATTGA+TGG | + | chr5_4:1669992-1670011 | None:intergenic | 20.0% |
!! | ATCAACTGAATTAAAAGTAA+AGG | + | chr5_4:1670095-1670114 | None:intergenic | 20.0% |
!!! | TAAAAAATTTGTTGCATTAG+TGG | - | chr5_4:1670133-1670152 | Msa0828750:CDS | 20.0% |
!!! | GAAAAAAAGTATTTTACTCT+AGG | - | chr5_4:1674009-1674028 | Msa0828750:CDS | 20.0% |
!!! | ATTTGGCTTTAAAAGATTTT+TGG | + | chr5_4:1674067-1674086 | None:intergenic | 20.0% |
!!! | TTAAAATATCTTGATTTGCT+TGG | + | chr5_4:1674198-1674217 | None:intergenic | 20.0% |
!!! | TTAATGTAAGTAGGAATTTT+TGG | - | chr5_4:1674280-1674299 | Msa0828750:CDS | 20.0% |
!!! | TAGTGACTTTTATTATGTAA+TGG | - | chr5_4:1674452-1674471 | Msa0828750:intron | 20.0% |
! | TAAAAAGGAAATTAGATGGT+GGG | + | chr5_4:1669728-1669747 | None:intergenic | 25.0% |
! | ATAAAAAGGAAATTAGATGG+TGG | + | chr5_4:1669729-1669748 | None:intergenic | 25.0% |
! | AAAATCAGAACATAAGGTTA+TGG | + | chr5_4:1669882-1669901 | None:intergenic | 25.0% |
! | TTGAACAAAATCAGAACATA+AGG | + | chr5_4:1669888-1669907 | None:intergenic | 25.0% |
! | AAGAATTATGCTAGATGTAT+AGG | - | chr5_4:1673946-1673965 | Msa0828750:CDS | 25.0% |
! | AGCAAAATCAGTACAAAAAA+TGG | - | chr5_4:1673979-1673998 | Msa0828750:CDS | 25.0% |
!!! | TGGAACAATTACTATTTCTA+AGG | - | chr5_4:1674140-1674159 | Msa0828750:CDS | 25.0% |
! | ATATAGACCCTAGTATAAAA+AGG | - | chr5_4:1674229-1674248 | Msa0828750:intron | 25.0% |
!!! | CTTTTATTATGTAATGGATG+TGG | - | chr5_4:1674458-1674477 | Msa0828750:intron | 25.0% |
!!! | TCGTTTACGAAATGTTTTTT+GGG | - | chr5_4:1674491-1674510 | Msa0828750:intron | 25.0% |
AAAAAGGAAATTAGATGGTG+GGG | + | chr5_4:1669727-1669746 | None:intergenic | 30.0% | |
AAGGAAGTAACATAAGGTTA+TGG | + | chr5_4:1669857-1669876 | None:intergenic | 30.0% | |
GTAGCAATTCTGATAAAAAG+AGG | + | chr5_4:1669958-1669977 | None:intergenic | 30.0% | |
! | CAAATTTCAATTGATGGTTG+AGG | + | chr5_4:1669986-1670005 | None:intergenic | 30.0% |
GAATTAAAAGTAAAGGCAAC+AGG | + | chr5_4:1670088-1670107 | None:intergenic | 30.0% | |
AAATGAAGATGATGAACCTA+AGG | - | chr5_4:1673867-1673886 | Msa0828750:CDS | 30.0% | |
TTAAATTTCATGCCAACCTT+AGG | + | chr5_4:1673886-1673905 | None:intergenic | 30.0% | |
! | TATGCTAGATGTATAGGTTT+TGG | - | chr5_4:1673952-1673971 | Msa0828750:CDS | 30.0% |
! | TTACAATGTGTTTTCATGCT+AGG | + | chr5_4:1674090-1674109 | None:intergenic | 30.0% |
TAGCATGAAAACACATTGTA+AGG | - | chr5_4:1674089-1674108 | Msa0828750:CDS | 30.0% | |
! | CCAATCTCCTTTTTATACTA+GGG | + | chr5_4:1674239-1674258 | None:intergenic | 30.0% |
! | TCCAATCTCCTTTTTATACT+AGG | + | chr5_4:1674240-1674259 | None:intergenic | 30.0% |
TAGTATAAAAAGGAGATTGG+AGG | - | chr5_4:1674239-1674258 | Msa0828750:intron | 30.0% | |
TACTTACATTAATCCAAGCT+TGG | + | chr5_4:1674272-1674291 | None:intergenic | 30.0% | |
AAGCTTGGATTAATGTAAGT+AGG | - | chr5_4:1674271-1674290 | Msa0828750:CDS | 30.0% | |
!!! | AAGTAGGAATTTTTGGTCTA+TGG | - | chr5_4:1674287-1674306 | Msa0828750:CDS | 30.0% |
GGATATGATAACCTTACATT+CGG | - | chr5_4:1674324-1674343 | Msa0828750:CDS | 30.0% | |
GATATGATAACCTTACATTC+GGG | - | chr5_4:1674325-1674344 | Msa0828750:CDS | 30.0% | |
!!! | GTCGTTTACGAAATGTTTTT+TGG | - | chr5_4:1674490-1674509 | Msa0828750:intron | 30.0% |
AAAACAAACAGTAACAACAG+AGG | + | chr5_4:1674806-1674825 | None:intergenic | 30.0% | |
! | TCTGTTGTTACTGTTTGTTT+TGG | - | chr5_4:1674805-1674824 | Msa0828750:intron | 30.0% |
!! | CTGTTGTTACTGTTTGTTTT+GGG | - | chr5_4:1674806-1674825 | Msa0828750:intron | 30.0% |
ATATATGGAAGAGACAATCG+CGG | - | chr5_4:1669787-1669806 | Msa0828750:intron | 35.0% | |
GTAACATAAGGTTATGGAGA+AGG | + | chr5_4:1669851-1669870 | None:intergenic | 35.0% | |
ATGGAGAAGGAAGTAACATA+AGG | + | chr5_4:1669863-1669882 | None:intergenic | 35.0% | |
AGAACATAAGGTTATGGAGA+AGG | + | chr5_4:1669876-1669895 | None:intergenic | 35.0% | |
TTCAACTGGATGCTAAAACT+GGG | + | chr5_4:1670014-1670033 | None:intergenic | 35.0% | |
CTTACTATTGTCTCTTCAAC+TGG | + | chr5_4:1670028-1670047 | None:intergenic | 35.0% | |
AGAAGAAGAAGAAGAAGAAG+AGG | - | chr5_4:1670178-1670197 | Msa0828750:CDS | 35.0% | |
AGAAGAAGAAGAAGAAGAAG+AGG | - | chr5_4:1670178-1670197 | Msa0828750:CDS | 35.0% | |
AGAAGAAGAAGAAGAAGAAG+AGG | - | chr5_4:1670178-1670197 | Msa0828750:CDS | 35.0% | |
AGAAGAAGAAGAAGAAGAAG+AGG | - | chr5_4:1670178-1670197 | Msa0828750:CDS | 35.0% | |
AGAAGAAGAAGAAGAAGAAG+AGG | - | chr5_4:1670178-1670197 | Msa0828750:CDS | 35.0% | |
AGAAGAAGAAGAAGAAGAAG+AGG | - | chr5_4:1670178-1670197 | Msa0828750:CDS | 35.0% | |
AGAAGAAGAAGAAGAAGAAG+AGG | - | chr5_4:1670178-1670197 | Msa0828750:CDS | 35.0% | |
AGAAGAAGAAGAAGAAGAAG+AGG | - | chr5_4:1670178-1670197 | Msa0828750:CDS | 35.0% | |
AGAAGAAGAAGAAGAAGAAG+AGG | - | chr5_4:1670178-1670197 | Msa0828750:CDS | 35.0% | |
GAAGAAGAAGAAGAAGAAGA+GGG | - | chr5_4:1670176-1670195 | Msa0828750:CDS | 35.0% | |
! | TGTGTTTTCATGCTAGGATT+TGG | + | chr5_4:1674084-1674103 | None:intergenic | 35.0% |
AATGTATGTGTGTCTTCAGA+TGG | - | chr5_4:1674120-1674139 | Msa0828750:CDS | 35.0% | |
!! | ACTATTTCTAAGGTTGCTCT+TGG | - | chr5_4:1674150-1674169 | Msa0828750:CDS | 35.0% |
CCCTAGTATAAAAAGGAGAT+TGG | - | chr5_4:1674236-1674255 | Msa0828750:intron | 35.0% | |
!!! | CATCTTTTTTCCCGAATGTA+AGG | + | chr5_4:1674338-1674357 | None:intergenic | 35.0% |
GAAACTACATAGACAAAGTG+AGG | - | chr5_4:1674361-1674380 | Msa0828750:CDS | 35.0% | |
!! | AGAAGGTTAAAGTGTTGACT+TGG | - | chr5_4:1674555-1674574 | Msa0828750:intron | 35.0% |
!!! | TTGTTTTGGGACATTTTCCT+TGG | - | chr5_4:1674819-1674838 | Msa0828750:intron | 35.0% |
!!! | TGTTTTGGGACATTTTCCTT+GGG | - | chr5_4:1674820-1674839 | Msa0828750:intron | 35.0% |
ATTCTTTCGTGCAATTCGTG+GGG | + | chr5_4:1669698-1669717 | None:intergenic | 40.0% | |
CATTCTTTCGTGCAATTCGT+GGG | + | chr5_4:1669699-1669718 | None:intergenic | 40.0% | |
TCATTCTTTCGTGCAATTCG+TGG | + | chr5_4:1669700-1669719 | None:intergenic | 40.0% | |
TATATGGAAGAGACAATCGC+GGG | - | chr5_4:1669788-1669807 | Msa0828750:intron | 40.0% | |
AAAAGAGGCAGTAGCAGAAA+CGG | + | chr5_4:1669943-1669962 | None:intergenic | 40.0% | |
CTTCAACTGGATGCTAAAAC+TGG | + | chr5_4:1670015-1670034 | None:intergenic | 40.0% | |
AGAAGAAGAAGAGGAAGAAG+AGG | - | chr5_4:1670187-1670206 | Msa0828750:CDS | 40.0% | |
AGAAGAAGAAGAAGAGGAAG+AGG | - | chr5_4:1670184-1670203 | Msa0828750:CDS | 40.0% | |
GATGAACGAAGAAGAAGAAG+AGG | - | chr5_4:1670338-1670357 | Msa0828750:CDS | 40.0% | |
AGAAGAAGAAGAGGAAGAAG+AGG | - | chr5_4:1670187-1670206 | Msa0828750:CDS | 40.0% | |
AGAAGAAGAAGAGGAAGAAG+AGG | - | chr5_4:1670187-1670206 | Msa0828750:CDS | 40.0% | |
GGAAGAAGAAGAAGAAGAAG+AGG | - | chr5_4:1670208-1670227 | Msa0828750:CDS | 40.0% | |
AGAAGAAGAAGAGGAAGAAG+AGG | - | chr5_4:1670187-1670206 | Msa0828750:CDS | 40.0% | |
AGAAGAAGAAGAAGAAGAGG+AGG | - | chr5_4:1670181-1670200 | Msa0828750:CDS | 40.0% | |
AGAGGAAGAAGAAGAAGAAG+AGG | - | chr5_4:1670205-1670224 | Msa0828750:CDS | 40.0% | |
AGAAGAAGAAGAGGAAGAAG+AGG | - | chr5_4:1670187-1670206 | Msa0828750:CDS | 40.0% | |
AGAAGAAGAGGAAGAAGAAG+AGG | - | chr5_4:1670647-1670666 | Msa0828750:CDS | 40.0% | |
AGAAGAAGAAGAAGAGGAAG+AGG | - | chr5_4:1670184-1670203 | Msa0828750:CDS | 40.0% | |
AGAAGAAGAGGAAGAAGAAG+AGG | - | chr5_4:1670647-1670666 | Msa0828750:CDS | 40.0% | |
AGAAGAAGAAGAAGAAGAGG+AGG | - | chr5_4:1670181-1670200 | Msa0828750:CDS | 40.0% | |
AGAAGAAGAGGAAGAAGAAG+AGG | - | chr5_4:1670647-1670666 | Msa0828750:CDS | 40.0% | |
AGAAGAAGAGGAAGAAGAAG+AGG | - | chr5_4:1670647-1670666 | Msa0828750:CDS | 40.0% | |
AGAAGAAGAGGAAGAAGAAG+AGG | - | chr5_4:1670647-1670666 | Msa0828750:CDS | 40.0% | |
AGAAGAAGAAGAAGAAGAGG+AGG | - | chr5_4:1670181-1670200 | Msa0828750:CDS | 40.0% | |
AAGAGGAGAAGAAGAAGAAG+AGG | - | chr5_4:1671945-1671964 | Msa0828750:CDS | 40.0% | |
AGAAGAAGAAGAAGAGGAGA+AGG | - | chr5_4:1671951-1671970 | Msa0828750:CDS | 40.0% | |
AGAAGAGGGTGAAAATTGTG+AGG | - | chr5_4:1673831-1673850 | Msa0828750:CDS | 40.0% | |
GAAGATGATGAACCTAAGGT+TGG | - | chr5_4:1673871-1673890 | Msa0828750:CDS | 40.0% | |
TACTCACATAGCTTCTTGCA+CGG | + | chr5_4:1674041-1674060 | None:intergenic | 40.0% | |
TCTATGGTTGTTGAAGCAAG+TGG | - | chr5_4:1674303-1674322 | Msa0828750:CDS | 40.0% | |
ACTACATAGACAAAGTGAGG+CGG | - | chr5_4:1674364-1674383 | Msa0828750:CDS | 40.0% | |
!! | AGGTTAAAGTGTTGACTTGG+AGG | - | chr5_4:1674558-1674577 | Msa0828750:intron | 40.0% |
!! | TTAAAGTGTTGACTTGGAGG+TGG | - | chr5_4:1674561-1674580 | Msa0828750:intron | 40.0% |
AAACATACATGCCGGAGTAT+TGG | + | chr5_4:1674600-1674619 | None:intergenic | 40.0% | |
CACTCGTAAAACATACATGC+CGG | + | chr5_4:1674608-1674627 | None:intergenic | 40.0% | |
! | GTATGTTTTACGAGTGGAGT+TGG | - | chr5_4:1674612-1674631 | Msa0828750:intron | 40.0% |
ATTACCTCAAAAGACACTCC+CGG | + | chr5_4:1674643-1674662 | None:intergenic | 40.0% | |
GAAACACACATAACCGCAAA+GGG | + | chr5_4:1674677-1674696 | None:intergenic | 40.0% | |
CTTTGCGGTTATGTGTGTTT+CGG | - | chr5_4:1674676-1674695 | Msa0828750:intron | 40.0% | |
! | GGGTGGTATGTTTTCTGTTT+TGG | - | chr5_4:1674704-1674723 | Msa0828750:intron | 40.0% |
!!! | CGGGCACACGTTTTGATTTT+GGG | - | chr5_4:1669807-1669826 | Msa0828750:intron | 45.0% |
GCAGAAACGGCAATGAATGT+TGG | + | chr5_4:1669930-1669949 | None:intergenic | 45.0% | |
AGAAGAAGAAGAGGAAGAGG+AGG | - | chr5_4:1670268-1670287 | Msa0828750:CDS | 45.0% | |
GGAAGAGGGTGAAAATTGTG+AGG | - | chr5_4:1670292-1670311 | Msa0828750:CDS | 45.0% | |
AGAGGAAGAAGAGGAAGAAG+AGG | - | chr5_4:1670196-1670215 | Msa0828750:CDS | 45.0% | |
AGAAGAGGAAGAAGAGGAAG+AGG | - | chr5_4:1670193-1670212 | Msa0828750:CDS | 45.0% | |
GGAAGAGGAAGAAGAAGAAG+AGG | - | chr5_4:1670377-1670396 | Msa0828750:CDS | 45.0% | |
AGAAGAAGAGGAAGAAGAGG+AGG | - | chr5_4:1670190-1670209 | Msa0828750:CDS | 45.0% | |
AGAGGAAGAAGAGGAAGAAG+AGG | - | chr5_4:1670196-1670215 | Msa0828750:CDS | 45.0% | |
GGAAGAAGAGGAAGAAGAAG+AGG | - | chr5_4:1670199-1670218 | Msa0828750:CDS | 45.0% | |
GGAAGAAGAAGAGGAAGAAG+AGG | - | chr5_4:1670437-1670456 | Msa0828750:CDS | 45.0% | |
AGAGGAAGAAGAGGAAGAAG+AGG | - | chr5_4:1670196-1670215 | Msa0828750:CDS | 45.0% | |
AGAAGAAGAGGAGGAAGAAG+AGG | - | chr5_4:1670512-1670531 | Msa0828750:CDS | 45.0% | |
AGAGGAAGAGGAAGAAGAAG+AGG | - | chr5_4:1670374-1670393 | Msa0828750:CDS | 45.0% | |
AGAAGAAGAGGAGGAAGAAG+AGG | - | chr5_4:1670512-1670531 | Msa0828750:CDS | 45.0% | |
GGAAGAAGAGGAAGAAGAAG+AGG | - | chr5_4:1670199-1670218 | Msa0828750:CDS | 45.0% | |
AGAAGAGGAAGAAGAAGAGG+AGG | - | chr5_4:1670431-1670450 | Msa0828750:CDS | 45.0% | |
AGAAGAAGAGGAGGAAGAAG+AGG | - | chr5_4:1670512-1670531 | Msa0828750:CDS | 45.0% | |
AGAAGAAGAGGAAGAGGAAG+AGG | - | chr5_4:1670908-1670927 | Msa0828750:CDS | 45.0% | |
GGAAGAGGAAGAAGAAGAAG+AGG | - | chr5_4:1670377-1670396 | Msa0828750:CDS | 45.0% | |
AGAAGAAGAAGAAGAGGAGG+AGG | - | chr5_4:1670506-1670525 | Msa0828750:CDS | 45.0% | |
AGAGGAAGAGGAAGAAGAAG+AGG | - | chr5_4:1670374-1670393 | Msa0828750:CDS | 45.0% | |
GGAAGAAGAAGAGGAAGAAG+AGG | - | chr5_4:1670437-1670456 | Msa0828750:CDS | 45.0% | |
GGAAGAAGAGGAAGAAGAAG+AGG | - | chr5_4:1670199-1670218 | Msa0828750:CDS | 45.0% | |
AGAAGAGGAAGAAGAAGAGG+AGG | - | chr5_4:1670431-1670450 | Msa0828750:CDS | 45.0% | |
AGAAGAAGAGGAGGAAGAAG+AGG | - | chr5_4:1670512-1670531 | Msa0828750:CDS | 45.0% | |
GGAAGAGGAAGAAGAAGAAG+AGG | - | chr5_4:1670377-1670396 | Msa0828750:CDS | 45.0% | |
AGAAGAAGAAGAAGAGGAGG+AGG | - | chr5_4:1670506-1670525 | Msa0828750:CDS | 45.0% | |
AAGAGGAAGAGGAAGAGAAG+AGG | - | chr5_4:1671892-1671911 | Msa0828750:CDS | 45.0% | |
AAGAGGAAGAGAAGAGGAAG+AGG | - | chr5_4:1671898-1671917 | Msa0828750:CDS | 45.0% | |
AAGAGAAGAGGAAGAGGAAG+AGG | - | chr5_4:1671904-1671923 | Msa0828750:CDS | 45.0% | |
AGAGGAAGAGGAAGAAGAAG+AGG | - | chr5_4:1670374-1670393 | Msa0828750:CDS | 45.0% | |
AGAGGAAGAAGAAGAGGAAG+AGG | - | chr5_4:1670434-1670453 | Msa0828750:CDS | 45.0% | |
TGGAGGTTAATGACCAAGCT+TGG | - | chr5_4:1674256-1674275 | Msa0828750:CDS | 45.0% | |
CTGCTTATGGGATGAGTTAG+TGG | - | chr5_4:1674532-1674551 | Msa0828750:intron | 45.0% | |
ATGGGATGAGTTAGTGGAGA+AGG | - | chr5_4:1674538-1674557 | Msa0828750:intron | 45.0% | |
!! | TTGACTTGGAGGTGGTTGTT+CGG | - | chr5_4:1674569-1674588 | Msa0828750:intron | 45.0% |
GTTCGGAAGATCCAATACTC+CGG | - | chr5_4:1674586-1674605 | Msa0828750:intron | 45.0% | |
! | CGGCATGTATGTTTTACGAG+TGG | - | chr5_4:1674606-1674625 | Msa0828750:intron | 45.0% |
TTACCTCAAAAGACACTCCC+GGG | + | chr5_4:1674642-1674661 | None:intergenic | 45.0% | |
!!! | GGGAGTGTCTTTTGAGGTAA+TGG | - | chr5_4:1674642-1674661 | Msa0828750:intron | 45.0% |
CGAAACACACATAACCGCAA+AGG | + | chr5_4:1674678-1674697 | None:intergenic | 45.0% | |
GTTATGTGTGTTTCGGCTGT+GGG | - | chr5_4:1674683-1674702 | Msa0828750:intron | 45.0% | |
TTATGTGTGTTTCGGCTGTG+GGG | - | chr5_4:1674684-1674703 | Msa0828750:intron | 45.0% | |
!! | TTTGGGACATTTTCCTTGGG+CGG | - | chr5_4:1674823-1674842 | Msa0828750:intron | 45.0% |
! | ACATTTTCCTTGGGCGGTTT+TGG | - | chr5_4:1674829-1674848 | Msa0828750:intron | 45.0% |
! | CATTTTCCTTGGGCGGTTTT+GGG | - | chr5_4:1674830-1674849 | Msa0828750:intron | 45.0% |
!! | ATCAAAAAAATAATATAAAA+AGG | + | chr5_4:1669743-1669762 | None:intergenic | 5.0% |
!!! | GCGGGCACACGTTTTGATTT+TGG | - | chr5_4:1669806-1669825 | Msa0828750:intron | 50.0% |
AGAAGAAGAGGAAGAGGAGG+AGG | - | chr5_4:1670271-1670290 | Msa0828750:CDS | 50.0% | |
GGAAGAAGAGGAGGAAGAAG+AGG | - | chr5_4:1670398-1670417 | Msa0828750:CDS | 50.0% | |
GGAGGAAGAAGAGGAAGAAG+AGG | - | chr5_4:1670407-1670426 | Msa0828750:CDS | 50.0% | |
AGAAGAGGAGGAAGAAGAGG+AGG | - | chr5_4:1670401-1670420 | Msa0828750:CDS | 50.0% | |
AGAAGAGGAGGAAGAGGAAG+AGG | - | chr5_4:1670527-1670546 | Msa0828750:CDS | 50.0% | |
GGAAGAGGAAGAAGAAGAGG+AGG | - | chr5_4:1670542-1670561 | Msa0828750:CDS | 50.0% | |
AGAAGAGGAGGAAGAAGAGG+AGG | - | chr5_4:1670401-1670420 | Msa0828750:CDS | 50.0% | |
GGAAGAAGAGGAGGAAGAAG+AGG | - | chr5_4:1670398-1670417 | Msa0828750:CDS | 50.0% | |
AGAAGAGGAGGAAGAAGAGG+AGG | - | chr5_4:1670401-1670420 | Msa0828750:CDS | 50.0% | |
GGAAGAAGAGGAGGAAGAAG+AGG | - | chr5_4:1670398-1670417 | Msa0828750:CDS | 50.0% | |
AGAAGAGGAGGAAGAAGAGG+AGG | - | chr5_4:1670401-1670420 | Msa0828750:CDS | 50.0% | |
GGAAGAAGAGGAGGAAGAAG+AGG | - | chr5_4:1670398-1670417 | Msa0828750:CDS | 50.0% | |
AGAAGAGGAGGAAGAAGAGG+AGG | - | chr5_4:1670401-1670420 | Msa0828750:CDS | 50.0% | |
AGAAGAGGAGGAAGAGGAAG+AGG | - | chr5_4:1670527-1670546 | Msa0828750:CDS | 50.0% | |
GGAAGAAGAGGAGGAAGAAG+AGG | - | chr5_4:1670398-1670417 | Msa0828750:CDS | 50.0% | |
AGAGGAGGAAGAAGAGGAAG+AGG | - | chr5_4:1670404-1670423 | Msa0828750:CDS | 50.0% | |
GGAAGAAGAGGAAGAGGAAG+AGG | - | chr5_4:1670368-1670387 | Msa0828750:CDS | 50.0% | |
AGAAGAGGAAGAGGAAGAGG+AGG | - | chr5_4:1670845-1670864 | Msa0828750:CDS | 50.0% | |
AGAAGAGGAAGAGGAAGAGG+AGG | - | chr5_4:1670845-1670864 | Msa0828750:CDS | 50.0% | |
AGAAGAAGAGGAGGAGGAAG+AGG | - | chr5_4:1671263-1671282 | Msa0828750:CDS | 50.0% | |
AGAAGAGGAGGAAGAAGAGG+AGG | - | chr5_4:1670401-1670420 | Msa0828750:CDS | 50.0% | |
GGAAGAAGAGGAGGAAGAAG+AGG | - | chr5_4:1670398-1670417 | Msa0828750:CDS | 50.0% | |
AGAAGAGGAGGAAGAAGAGG+AGG | - | chr5_4:1670401-1670420 | Msa0828750:CDS | 50.0% | |
AGAAGAGGAGGAAGAGGAAG+AGG | - | chr5_4:1670527-1670546 | Msa0828750:CDS | 50.0% | |
AGAGGAGGAAGAAGAGGAAG+AGG | - | chr5_4:1670404-1670423 | Msa0828750:CDS | 50.0% | |
AGAAGAGGAGGAGGAAGAAG+AGG | - | chr5_4:1671788-1671807 | Msa0828750:CDS | 50.0% | |
AGAGGAAGAGGAAGAGGAAG+AGG | - | chr5_4:1671121-1671140 | Msa0828750:CDS | 50.0% | |
AGAGGAAGAGGAAGAGGAAG+AGG | - | chr5_4:1671121-1671140 | Msa0828750:CDS | 50.0% | |
TTTGGGCAGATGCGAGATGT+AGG | - | chr5_4:1674508-1674527 | Msa0828750:intron | 50.0% | |
TTGGGCAGATGCGAGATGTA+GGG | - | chr5_4:1674509-1674528 | Msa0828750:intron | 50.0% | |
CGAGATGTAGGGCTGCTTAT+GGG | - | chr5_4:1674520-1674539 | Msa0828750:intron | 50.0% | |
TACCTCAAAAGACACTCCCG+GGG | + | chr5_4:1674641-1674660 | None:intergenic | 50.0% | |
!! | ATGGTGTTGCTGTCCCTTTG+CGG | - | chr5_4:1674661-1674680 | Msa0828750:intron | 50.0% |
GGTTATGTGTGTTTCGGCTG+TGG | - | chr5_4:1674682-1674701 | Msa0828750:intron | 50.0% | |
AGAGGAAGAGGAGGAGGAAG+AGG | - | chr5_4:1670277-1670296 | Msa0828750:CDS | 55.0% | |
GAGGAAGAGGAGGAGGAAGA+GGG | - | chr5_4:1670278-1670297 | Msa0828750:CDS | 55.0% | |
GGAGGAAGAAGAGGAGGAAG+AGG | - | chr5_4:1670521-1670540 | Msa0828750:CDS | 55.0% | |
GGAGGAAGAAGAGGAGGAAG+AGG | - | chr5_4:1670521-1670540 | Msa0828750:CDS | 55.0% | |
GGAAGAAGAGGAGGAAGAGG+AGG | - | chr5_4:1670524-1670543 | Msa0828750:CDS | 55.0% | |
AGAGGAGGAAGAGGAGGAAG+AGG | - | chr5_4:1670581-1670600 | Msa0828750:CDS | 55.0% | |
GGAGGAAGAGGAGGAAGAAG+AGG | - | chr5_4:1670605-1670624 | Msa0828750:CDS | 55.0% | |
GGAAGAGGAGGAAGAAGAGG+AGG | - | chr5_4:1670608-1670627 | Msa0828750:CDS | 55.0% | |
GGAGGAAGAAGAGGAGGAAG+AGG | - | chr5_4:1670521-1670540 | Msa0828750:CDS | 55.0% | |
AGAGGAGGAAGAGGAAGAGG+AGG | - | chr5_4:1670530-1670549 | Msa0828750:CDS | 55.0% | |
AGAGGAAGAGGAGGAGGAAG+AGG | - | chr5_4:1670277-1670296 | Msa0828750:CDS | 55.0% | |
GGAGGAAGAGGAGGAAGAAG+AGG | - | chr5_4:1670605-1670624 | Msa0828750:CDS | 55.0% | |
GGAAGAGGAGGAAGAAGAGG+AGG | - | chr5_4:1670608-1670627 | Msa0828750:CDS | 55.0% | |
AGAGGAAGAGGAAGAGGAGG+AGG | - | chr5_4:1670848-1670867 | Msa0828750:CDS | 55.0% | |
AGAGGAAGAGGAAGAGGAGG+AGG | - | chr5_4:1670848-1670867 | Msa0828750:CDS | 55.0% | |
AGAGGAAGAGGAGGAGGAAG+AGG | - | chr5_4:1670277-1670296 | Msa0828750:CDS | 55.0% | |
GGAGGAAGAGGAGGAAGAAG+AGG | - | chr5_4:1670605-1670624 | Msa0828750:CDS | 55.0% | |
GGAAGAGGAGGAAGAAGAGG+AGG | - | chr5_4:1670608-1670627 | Msa0828750:CDS | 55.0% | |
AGAGGAGGAAGAAGAGGAGG+AGG | - | chr5_4:1670518-1670537 | Msa0828750:CDS | 55.0% | |
GGAAGAAGAGGAGGAGGAAG+AGG | - | chr5_4:1670944-1670963 | Msa0828750:CDS | 55.0% | |
AGAGGAGGAGGAAGAGGAAG+AGG | - | chr5_4:1670950-1670969 | Msa0828750:CDS | 55.0% | |
AGAGGAAGAGGAGGAGGAAG+AGG | - | chr5_4:1670277-1670296 | Msa0828750:CDS | 55.0% | |
GGAGGAAGAGGAGGAAGAAG+AGG | - | chr5_4:1670605-1670624 | Msa0828750:CDS | 55.0% | |
GGAAGAGGAGGAAGAAGAGG+AGG | - | chr5_4:1670608-1670627 | Msa0828750:CDS | 55.0% | |
AGAGGAGGAAGAAGAGGAGG+AGG | - | chr5_4:1670518-1670537 | Msa0828750:CDS | 55.0% | |
GGAAGAAGAGGAGGAGGAAG+AGG | - | chr5_4:1670944-1670963 | Msa0828750:CDS | 55.0% | |
AGAGGAGGAGGAAGAGGAAG+AGG | - | chr5_4:1670950-1670969 | Msa0828750:CDS | 55.0% | |
AGAGGAGGAGGAAGAGGAAG+AGG | - | chr5_4:1670950-1670969 | Msa0828750:CDS | 55.0% | |
AGAGGAAGAGGAGGAGGAAG+AGG | - | chr5_4:1670277-1670296 | Msa0828750:CDS | 55.0% | |
AGAGGAGGAGGAAGAGGAAG+AGG | - | chr5_4:1670950-1670969 | Msa0828750:CDS | 55.0% | |
GGAGGAAGAGGAAGAGGAAG+AGG | - | chr5_4:1670533-1670552 | Msa0828750:CDS | 55.0% | |
AGAAGAGGAGGAGGAAGAGG+AGG | - | chr5_4:1670947-1670966 | Msa0828750:CDS | 55.0% | |
GGAGGAAGAGGAGGAAGAAG+AGG | - | chr5_4:1670605-1670624 | Msa0828750:CDS | 55.0% | |
GGAAGAGGAGGAAGAAGAGG+AGG | - | chr5_4:1670608-1670627 | Msa0828750:CDS | 55.0% | |
AGAGGAGGAAGAAGAGGAGG+AGG | - | chr5_4:1670518-1670537 | Msa0828750:CDS | 55.0% | |
GGAAGAAGAGGAGGAGGAAG+AGG | - | chr5_4:1670944-1670963 | Msa0828750:CDS | 55.0% | |
AGAAGAGGAGGAGGAAGAGG+AGG | - | chr5_4:1670947-1670966 | Msa0828750:CDS | 55.0% | |
AGAGGAGGAGGAAGAGGAAG+AGG | - | chr5_4:1670950-1670969 | Msa0828750:CDS | 55.0% | |
GGAGGAAGAGGAAGAGGAAG+AGG | - | chr5_4:1670533-1670552 | Msa0828750:CDS | 55.0% | |
GGAGGAAGAAGAGGAGGAAG+AGG | - | chr5_4:1670521-1670540 | Msa0828750:CDS | 55.0% | |
AGAGGAGGAAGAGGAAGAGG+AGG | - | chr5_4:1670530-1670549 | Msa0828750:CDS | 55.0% | |
AGAGGAAGAGGAGGAGGAAG+AGG | - | chr5_4:1670277-1670296 | Msa0828750:CDS | 55.0% | |
GGAGGAAGAGGAGGAAGAAG+AGG | - | chr5_4:1670605-1670624 | Msa0828750:CDS | 55.0% | |
GGAGGAAGAAGAGGAAGAGG+AGG | - | chr5_4:1670839-1670858 | Msa0828750:CDS | 55.0% | |
GGAAGAAGAGGAAGAGGAGG+AGG | - | chr5_4:1671560-1671579 | Msa0828750:CDS | 55.0% | |
AGAGGAAGAGGAGGAGGAAG+AGG | - | chr5_4:1670277-1670296 | Msa0828750:CDS | 55.0% | |
AGAGGAAGAGGAGGAGGAAG+AGG | - | chr5_4:1670277-1670296 | Msa0828750:CDS | 55.0% | |
AGAGGAGGAGGAAGAGGAAG+AGG | - | chr5_4:1670950-1670969 | Msa0828750:CDS | 55.0% | |
GGAGGAAGAGGAAGAGGAAG+AGG | - | chr5_4:1670533-1670552 | Msa0828750:CDS | 55.0% | |
AGAGGAGGAGGAAGAAGAGG+AGG | - | chr5_4:1671791-1671810 | Msa0828750:CDS | 55.0% | |
GGAAGAAGAGGAGGAGGAAG+AGG | - | chr5_4:1670944-1670963 | Msa0828750:CDS | 55.0% | |
AGAAGAGGAGGAGGAAGAGG+AGG | - | chr5_4:1670947-1670966 | Msa0828750:CDS | 55.0% | |
GGAGGAAGAGGAAGAGGAAG+AGG | - | chr5_4:1670533-1670552 | Msa0828750:CDS | 55.0% | |
AAAGTGAGGCGGCTTCGACT+TGG | - | chr5_4:1674375-1674394 | Msa0828750:intron | 55.0% | |
AAGTGAGGCGGCTTCGACTT+GGG | - | chr5_4:1674376-1674395 | Msa0828750:intron | 55.0% | |
GCGAGATGTAGGGCTGCTTA+TGG | - | chr5_4:1674519-1674538 | Msa0828750:intron | 55.0% | |
CATGACAGAACAGCAGCCAC+TGG | - | chr5_4:1674736-1674755 | Msa0828750:intron | 55.0% | |
! | GCAGGCTGGTTGTTGCTGTT+CGG | - | chr5_4:1674779-1674798 | Msa0828750:intron | 55.0% |
! | CAGGCTGGTTGTTGCTGTTC+GGG | - | chr5_4:1674780-1674799 | Msa0828750:intron | 55.0% |
!!! | TTCCTTGGGCGGTTTTGGGT+TGG | - | chr5_4:1674834-1674853 | Msa0828750:intron | 55.0% |
GGAGGAAGAGGAGGAAGAGG+AGG | - | chr5_4:1670584-1670603 | Msa0828750:CDS | 60.0% | |
GGAAGAGGAGGAAGAGGAGG+AGG | - | chr5_4:1670587-1670606 | Msa0828750:CDS | 60.0% | |
GGAGGAAGAGGAGGAGGAAG+AGG | - | chr5_4:1670593-1670612 | Msa0828750:CDS | 60.0% | |
GGAAGAGGAGGAGGAAGAGG+AGG | - | chr5_4:1670280-1670299 | Msa0828750:CDS | 60.0% | |
GGAGGAAGAGGAAGAGGAGG+AGG | - | chr5_4:1670788-1670807 | Msa0828750:CDS | 60.0% | |
GGAAGAGGAGGAGGAAGAGG+AGG | - | chr5_4:1670280-1670299 | Msa0828750:CDS | 60.0% | |
AGAGGAGGAGGAAGAGGAGG+AGG | - | chr5_4:1670599-1670618 | Msa0828750:CDS | 60.0% | |
GGAGGAAGAGGAGGAGGAAG+AGG | - | chr5_4:1670593-1670612 | Msa0828750:CDS | 60.0% | |
GGAAGAGGAGGAGGAAGAGG+AGG | - | chr5_4:1670280-1670299 | Msa0828750:CDS | 60.0% | |
GGAAGAGGAGGAGGAAGAGG+AGG | - | chr5_4:1670280-1670299 | Msa0828750:CDS | 60.0% | |
GGAGGAGGAAGAGGAAGAGG+AGG | - | chr5_4:1670953-1670972 | Msa0828750:CDS | 60.0% | |
GGAGGAAGAGGAAGAGGAGG+AGG | - | chr5_4:1670788-1670807 | Msa0828750:CDS | 60.0% | |
GGAAGAGGAGGAGGAAGAGG+AGG | - | chr5_4:1670280-1670299 | Msa0828750:CDS | 60.0% | |
GGAGGAGGAAGAGGAAGAGG+AGG | - | chr5_4:1670953-1670972 | Msa0828750:CDS | 60.0% | |
GGAGGAAGAGGAAGAGGAGG+AGG | - | chr5_4:1670788-1670807 | Msa0828750:CDS | 60.0% | |
GGAAGAGGAAGAGGAGGAGG+AGG | - | chr5_4:1670791-1670810 | Msa0828750:CDS | 60.0% | |
AGAGGAAGAGGAGGAGGAGG+AGG | - | chr5_4:1671004-1671023 | Msa0828750:CDS | 60.0% | |
AGAGGAGGAGGAGGAGGAAG+AGG | - | chr5_4:1671010-1671029 | Msa0828750:CDS | 60.0% | |
GGAGGAAGAGGAGGAGGAAG+AGG | - | chr5_4:1670593-1670612 | Msa0828750:CDS | 60.0% | |
GGAGGAGGAAGAGGAAGAGG+AGG | - | chr5_4:1670953-1670972 | Msa0828750:CDS | 60.0% | |
GGAGGAAGAGGAAGAGGAGG+AGG | - | chr5_4:1670788-1670807 | Msa0828750:CDS | 60.0% | |
GGAAGAGGAAGAGGAGGAGG+AGG | - | chr5_4:1670791-1670810 | Msa0828750:CDS | 60.0% | |
AGAGGAAGAGGAGGAGGAGG+AGG | - | chr5_4:1671004-1671023 | Msa0828750:CDS | 60.0% | |
AGAGGAGGAGGAGGAGGAAG+AGG | - | chr5_4:1671010-1671029 | Msa0828750:CDS | 60.0% | |
AGAGGAGGAGGAGGAGGAAG+AGG | - | chr5_4:1671010-1671029 | Msa0828750:CDS | 60.0% | |
GGAGGAGGAGGAAGAGGAAG+AGG | - | chr5_4:1671091-1671110 | Msa0828750:CDS | 60.0% | |
GGAGGAGGAAGAGGAAGAGG+AGG | - | chr5_4:1670953-1670972 | Msa0828750:CDS | 60.0% | |
GGAGGAAGAGGAAGAGGAGG+AGG | - | chr5_4:1670788-1670807 | Msa0828750:CDS | 60.0% | |
AGAGGAGGAGGAAGAGGAGG+AGG | - | chr5_4:1670599-1670618 | Msa0828750:CDS | 60.0% | |
GGAGGAAGAGGAGGAGGAAG+AGG | - | chr5_4:1670593-1670612 | Msa0828750:CDS | 60.0% | |
GGAAGAGGAGGAGGAAGAGG+AGG | - | chr5_4:1670280-1670299 | Msa0828750:CDS | 60.0% | |
AGAGGAGGAGGAAGAGGAGG+AGG | - | chr5_4:1670599-1670618 | Msa0828750:CDS | 60.0% | |
GGAGGAAGAGGAGGAGGAAG+AGG | - | chr5_4:1670593-1670612 | Msa0828750:CDS | 60.0% | |
GGAAGAGGAGGAGGAAGAGG+AGG | - | chr5_4:1670280-1670299 | Msa0828750:CDS | 60.0% | |
AGAGGAGGAGGAAGAGGAGG+AGG | - | chr5_4:1670599-1670618 | Msa0828750:CDS | 60.0% | |
CGAGGAAGAGGAGGAGGAAG+AGG | - | chr5_4:1671377-1671396 | Msa0828750:CDS | 60.0% | |
GGAGGAAGAGGAAGAGGAGG+AGG | - | chr5_4:1670788-1670807 | Msa0828750:CDS | 60.0% | |
GGAAGAGGAGGAGGAAGAGG+AGG | - | chr5_4:1670280-1670299 | Msa0828750:CDS | 60.0% | |
AGAGGAGGAGGAAGAGGAGG+AGG | - | chr5_4:1670599-1670618 | Msa0828750:CDS | 60.0% | |
GGAGGAAGAGGAGGAGGAAG+AGG | - | chr5_4:1670593-1670612 | Msa0828750:CDS | 60.0% | |
GGAAGAGGAGGAGGAAGAGG+AGG | - | chr5_4:1670280-1670299 | Msa0828750:CDS | 60.0% | |
GGAAGAGGAGGAGGAAGAGG+AGG | - | chr5_4:1670280-1670299 | Msa0828750:CDS | 60.0% | |
AGAGGAGGAGGAAGAGGAGG+AGG | - | chr5_4:1670599-1670618 | Msa0828750:CDS | 60.0% | |
GGAGGAAGAGGAGGAGGAAG+AGG | - | chr5_4:1670593-1670612 | Msa0828750:CDS | 60.0% | |
GGAAGAGGAGGAGGAAGAGG+AGG | - | chr5_4:1670280-1670299 | Msa0828750:CDS | 60.0% | |
AGAGGAGGAGGAAGAGGAGG+AGG | - | chr5_4:1670599-1670618 | Msa0828750:CDS | 60.0% | |
GGAGGAAGAGGAGGAGGAAG+AGG | - | chr5_4:1670593-1670612 | Msa0828750:CDS | 60.0% | |
GGAAGAGGAGGAGGAAGAGG+AGG | - | chr5_4:1670280-1670299 | Msa0828750:CDS | 60.0% | |
AGAGGAGGAGGAAGAGGAGG+AGG | - | chr5_4:1670599-1670618 | Msa0828750:CDS | 60.0% | |
AGAGGAGGAGGAGGAGGAAG+AGG | - | chr5_4:1671010-1671029 | Msa0828750:CDS | 60.0% | |
AGAGGAGGAGGAGGAGGAAG+AGG | - | chr5_4:1671010-1671029 | Msa0828750:CDS | 60.0% | |
AGAGGAGGAGGAGGAGGAAG+AGG | - | chr5_4:1671010-1671029 | Msa0828750:CDS | 60.0% | |
GGAGGAGGAGGAAGAGGAAG+AGG | - | chr5_4:1671091-1671110 | Msa0828750:CDS | 60.0% | |
GGAGGAGGAAGAGGAAGAGG+AGG | - | chr5_4:1670953-1670972 | Msa0828750:CDS | 60.0% | |
GGAGGAAGAGGAAGAGGAGG+AGG | - | chr5_4:1670788-1670807 | Msa0828750:CDS | 60.0% | |
GGAGGAGGAAGAAGAGGAGG+AGG | - | chr5_4:1671794-1671813 | Msa0828750:CDS | 60.0% | |
AGAGGAGGAGGAAGAGGAGG+AGG | - | chr5_4:1670599-1670618 | Msa0828750:CDS | 60.0% | |
GGAGGAGGAGGAAGAGGAAG+AGG | - | chr5_4:1671091-1671110 | Msa0828750:CDS | 60.0% | |
!! | AGGCGGCTTCGACTTGGGAT+AGG | - | chr5_4:1674381-1674400 | Msa0828750:intron | 60.0% |
!! | ACGAGTGGAGTTGGTGTCCC+CGG | - | chr5_4:1674621-1674640 | Msa0828750:intron | 60.0% |
!!! | GTCCCCGGGAGTGTCTTTTG+AGG | - | chr5_4:1674636-1674655 | Msa0828750:intron | 60.0% |
TGTGTGTTTCGGCTGTGGGG+TGG | - | chr5_4:1674687-1674706 | Msa0828750:intron | 60.0% | |
CAGGCAGAAAGCAGCACCAG+TGG | + | chr5_4:1674755-1674774 | None:intergenic | 60.0% | |
TGCCAACCCAAAACCGCCCA+AGG | + | chr5_4:1674839-1674858 | None:intergenic | 60.0% | |
GGAGGAGGAGGAGGAAGAGG+AGG | - | chr5_4:1671013-1671032 | Msa0828750:CDS | 65.0% | |
GGAGGAGGAGGAAGAGGAGG+AGG | - | chr5_4:1671016-1671035 | Msa0828750:CDS | 65.0% | |
GGAGGAGGAGGAGGAAGAGG+AGG | - | chr5_4:1671013-1671032 | Msa0828750:CDS | 65.0% | |
GGAGGAGGAGGAAGAGGAGG+AGG | - | chr5_4:1671016-1671035 | Msa0828750:CDS | 65.0% | |
GGAGGAGGAAGAGGAGGAGG+AGG | - | chr5_4:1670803-1670822 | Msa0828750:CDS | 65.0% | |
GGAGGAAGAGGAGGAGGAGG+AGG | - | chr5_4:1671058-1671077 | Msa0828750:CDS | 65.0% | |
GGAAGAGGAGGAGGAGGAGG+AGG | - | chr5_4:1671007-1671026 | Msa0828750:CDS | 65.0% | |
GGAGGAGGAGGAGGAGGAAG+AGG | - | chr5_4:1671067-1671086 | Msa0828750:CDS | 65.0% | |
GGAGGAGGAGGAGGAAGAGG+AGG | - | chr5_4:1671013-1671032 | Msa0828750:CDS | 65.0% | |
GGAGGAGGAGGAAGAGGAGG+AGG | - | chr5_4:1671016-1671035 | Msa0828750:CDS | 65.0% | |
GGAGGAGGAAGAGGAGGAGG+AGG | - | chr5_4:1670803-1670822 | Msa0828750:CDS | 65.0% | |
GGAGGAAGAGGAGGAGGAGG+AGG | - | chr5_4:1671058-1671077 | Msa0828750:CDS | 65.0% | |
GGAGGAGGAAGAGGAGGAGG+AGG | - | chr5_4:1670803-1670822 | Msa0828750:CDS | 65.0% | |
GGAGGAAGAGGAGGAGGAGG+AGG | - | chr5_4:1671058-1671077 | Msa0828750:CDS | 65.0% | |
GGAAGAGGAGGAGGAGGAGG+AGG | - | chr5_4:1671007-1671026 | Msa0828750:CDS | 65.0% | |
AGAGGAGGAGGAGGAGGAGG+AGG | - | chr5_4:1671064-1671083 | Msa0828750:CDS | 65.0% | |
GGAGGAGGAGGACGAGGAAG+AGG | - | chr5_4:1671365-1671384 | Msa0828750:CDS | 65.0% | |
GGAGGAGGACGAGGAAGAGG+AGG | - | chr5_4:1671368-1671387 | Msa0828750:CDS | 65.0% | |
GGAGGACGAGGAAGAGGAGG+AGG | - | chr5_4:1671371-1671390 | Msa0828750:CDS | 65.0% | |
GGAGGAGGAAGAGGAGGAGG+AGG | - | chr5_4:1670803-1670822 | Msa0828750:CDS | 65.0% | |
GGAGGAAGAGGAGGAGGAGG+AGG | - | chr5_4:1671058-1671077 | Msa0828750:CDS | 65.0% | |
GGAGGAGGAGGAGGAAGAGG+AGG | - | chr5_4:1671013-1671032 | Msa0828750:CDS | 65.0% | |
GGAGGAGGAGGAAGAGGAGG+AGG | - | chr5_4:1671016-1671035 | Msa0828750:CDS | 65.0% | |
GGAGGAGGAAGAGGAGGAGG+AGG | - | chr5_4:1670803-1670822 | Msa0828750:CDS | 65.0% | |
GGAGGAAGAGGAGGAGGAGG+AGG | - | chr5_4:1671058-1671077 | Msa0828750:CDS | 65.0% | |
GGAGGAGGAGGAGGAAGAGG+AGG | - | chr5_4:1671013-1671032 | Msa0828750:CDS | 65.0% | |
GGAGGAGGAGGAAGAGGAGG+AGG | - | chr5_4:1671016-1671035 | Msa0828750:CDS | 65.0% | |
GGAGGAGGAAGAGGAGGAGG+AGG | - | chr5_4:1670803-1670822 | Msa0828750:CDS | 65.0% | |
GGAGGAAGAGGAGGAGGAGG+AGG | - | chr5_4:1671058-1671077 | Msa0828750:CDS | 65.0% | |
GGAGGAGGAAGAGGAGGAGG+AGG | - | chr5_4:1670803-1670822 | Msa0828750:CDS | 65.0% | |
GGAGGAAGAGGAGGAGGAGG+AGG | - | chr5_4:1671058-1671077 | Msa0828750:CDS | 65.0% | |
GGAAGAGGAGGAGGAGGAGG+AGG | - | chr5_4:1671007-1671026 | Msa0828750:CDS | 65.0% | |
AGAGGAGGAGGAGGAGGAGG+AGG | - | chr5_4:1671064-1671083 | Msa0828750:CDS | 65.0% | |
GGAGGAGGAGGAGGAGGAAG+AGG | - | chr5_4:1671067-1671086 | Msa0828750:CDS | 65.0% | |
!! | CGAGTGGAGTTGGTGTCCCC+GGG | - | chr5_4:1674622-1674641 | Msa0828750:intron | 65.0% |
CTGCTTTCTGCCTGCTGCGC+AGG | - | chr5_4:1674761-1674780 | Msa0828750:intron | 65.0% | |
TTTCTGCCTGCTGCGCAGGC+TGG | - | chr5_4:1674765-1674784 | Msa0828750:intron | 65.0% | |
CAACAACCAGCCTGCGCAGC+AGG | + | chr5_4:1674774-1674793 | None:intergenic | 65.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | - | chr5_4:1671332-1671351 | Msa0828750:CDS | 70.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | - | chr5_4:1671332-1671351 | Msa0828750:CDS | 70.0% | |
GGAGGAGGAGGAGGAGGACG+AGG | - | chr5_4:1671341-1671360 | Msa0828750:CDS | 70.0% | |
GGAGGAGGAGGAGGACGAGG+AGG | - | chr5_4:1671344-1671363 | Msa0828750:CDS | 70.0% | |
GGAGGAGGAGGACGAGGAGG+AGG | - | chr5_4:1671347-1671366 | Msa0828750:CDS | 70.0% | |
GGAGGAGGACGAGGAGGAGG+AGG | - | chr5_4:1671350-1671369 | Msa0828750:CDS | 70.0% | |
GGAGGACGAGGAGGAGGAGG+AGG | - | chr5_4:1671353-1671372 | Msa0828750:CDS | 70.0% | |
CGAGGAGGAGGAGGAGGACG+AGG | - | chr5_4:1671359-1671378 | Msa0828750:CDS | 70.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | - | chr5_4:1671332-1671351 | Msa0828750:CDS | 70.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | - | chr5_4:1671332-1671351 | Msa0828750:CDS | 70.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | - | chr5_4:1671332-1671351 | Msa0828750:CDS | 70.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | - | chr5_4:1671332-1671351 | Msa0828750:CDS | 70.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | - | chr5_4:1671332-1671351 | Msa0828750:CDS | 70.0% | |
GGAGGAGGAGGAGGAGGACG+AGG | - | chr5_4:1671341-1671360 | Msa0828750:CDS | 70.0% | |
GGAGGAGGAGGAGGACGAGG+AGG | - | chr5_4:1671344-1671363 | Msa0828750:CDS | 70.0% | |
GGAGGAGGAGGACGAGGAGG+AGG | - | chr5_4:1671347-1671366 | Msa0828750:CDS | 70.0% | |
GGAGGAGGACGAGGAGGAGG+AGG | - | chr5_4:1671350-1671369 | Msa0828750:CDS | 70.0% | |
GGAGGACGAGGAGGAGGAGG+AGG | - | chr5_4:1671353-1671372 | Msa0828750:CDS | 70.0% | |
GGACGAGGAGGAGGAGGAGG+AGG | - | chr5_4:1671356-1671375 | Msa0828750:CDS | 70.0% | |
CGAGGAGGAGGAGGAGGAGG+AGG | - | chr5_4:1671857-1671876 | Msa0828750:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 1669680 | 1674861 | 1669680 | ID=Msa0828750;Name=Msa0828750 |
chr5_4 | mRNA | 1669680 | 1674861 | 1669680 | ID=Msa0828750-mRNA-1;Parent=Msa0828750;Name=Msa0828750-mRNA-1;_AED=0.49;_eAED=0.49;_QI=0|0|0|0.4|1|1|5|0|1492 |
chr5_4 | exon | 1674859 | 1674861 | 1674859 | ID=Msa0828750-mRNA-1:exon:428;Parent=Msa0828750-mRNA-1 |
chr5_4 | exon | 1674242 | 1674388 | 1674242 | ID=Msa0828750-mRNA-1:exon:427;Parent=Msa0828750-mRNA-1 |
chr5_4 | exon | 1670110 | 1674192 | 1670110 | ID=Msa0828750-mRNA-1:exon:426;Parent=Msa0828750-mRNA-1 |
chr5_4 | exon | 1669884 | 1670011 | 1669884 | ID=Msa0828750-mRNA-1:exon:425;Parent=Msa0828750-mRNA-1 |
chr5_4 | exon | 1669680 | 1669797 | 1669680 | ID=Msa0828750-mRNA-1:exon:424;Parent=Msa0828750-mRNA-1 |
chr5_4 | CDS | 1674859 | 1674861 | 1674859 | ID=Msa0828750-mRNA-1:cds;Parent=Msa0828750-mRNA-1 |
chr5_4 | CDS | 1674242 | 1674388 | 1674242 | ID=Msa0828750-mRNA-1:cds;Parent=Msa0828750-mRNA-1 |
chr5_4 | CDS | 1670110 | 1674192 | 1670110 | ID=Msa0828750-mRNA-1:cds;Parent=Msa0828750-mRNA-1 |
chr5_4 | CDS | 1669884 | 1670011 | 1669884 | ID=Msa0828750-mRNA-1:cds;Parent=Msa0828750-mRNA-1 |
chr5_4 | CDS | 1669680 | 1669797 | 1669680 | ID=Msa0828750-mRNA-1:cds;Parent=Msa0828750-mRNA-1 |
Gene Sequence |
Protein sequence |