AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0828750


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0828750 MtrunA17_Chr2g0296781 69.591 171 45 7 1244 1411 8 174 4.40e-63 230
Msa0828750 MtrunA17_Chr1g0196541 53.073 179 63 8 1243 1411 7 174 1.21e-34 143
Msa0828750 MtrunA17_Chr6g0476431 60.000 85 28 3 1233 1316 1 80 1.44e-23 96.3
Msa0828750 MtrunA17_Chr6g0477261 79.365 63 11 2 1350 1411 2 63 6.11e-22 102
Msa0828750 MtrunA17_Chr5g0409511 78.049 41 9 0 1414 1454 15 55 2.57e-19 82.8
Msa0828750 MtrunA17_Chr6g0479711 64.286 42 9 2 1416 1454 62 100 2.56e-11 61.6
Msa0828750 MtrunA17_Chr4g0051451 69.048 42 9 2 1415 1454 2 41 5.12e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 251 sgRNAs with CRISPR-Local

Find 374 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACAACCAGCCTGCGCAGC+AGG 0.259646 5_4:+1669748 None:intergenic
TATGCTAGATGTATAGGTTT+TGG 0.261658 5_4:-1670567 Msa0828750:CDS
GGAGGAAGAGGAGGAGGAGG+AGG 0.262685 5_4:-1672707 Msa0828750:CDS
GGAGGAAGAGGAGGAGGAGG+AGG 0.262685 5_4:-1673196 Msa0828750:CDS
GGAGGAAGAGGAGGAGGAGG+AGG 0.262685 5_4:-1673461 Msa0828750:CDS
GGAGGACGAGGAGGAGGAGG+AGG 0.263710 5_4:-1672668 Msa0828750:CDS
GGAGGAGGAGGACGAGGAGG+AGG 0.263710 5_4:-1672674 Msa0828750:CDS
GGAGGAGGAGGACGAGGAGG+AGG 0.263710 5_4:-1673172 Msa0828750:CDS
CAGGCTGGTTGTTGCTGTTC+GGG 0.264478 5_4:-1669739 Msa0828750:CDS
CTGCTTTCTGCCTGCTGCGC+AGG 0.264898 5_4:-1669758 Msa0828750:CDS
GGAGGAGGACGAGGAGGAGG+AGG 0.278997 5_4:-1672671 Msa0828750:CDS
GGAGGAGGACGAGGAGGAGG+AGG 0.278997 5_4:-1673169 Msa0828750:CDS
AAGAATTATGCTAGATGTAT+AGG 0.283443 5_4:-1670573 Msa0828750:CDS
GGAGGAGGAGGAAGAGGAGG+AGG 0.292157 5_4:-1672887 Msa0828750:CDS
GGAGGAGGAGGAAGAGGAGG+AGG 0.292157 5_4:-1672905 Msa0828750:CDS
GGAGGAGGAGGAAGAGGAGG+AGG 0.292157 5_4:-1673446 Msa0828750:CDS
GGAGGAGGAGGAAGAGGAGG+AGG 0.292157 5_4:-1673467 Msa0828750:CDS
GGAGGAGGAAGAGGAGGAGG+AGG 0.293981 5_4:-1672884 Msa0828750:CDS
GGAGGAGGAAGAGGAGGAGG+AGG 0.293981 5_4:-1672902 Msa0828750:CDS
GGAGGAGGAAGAGGAGGAGG+AGG 0.293981 5_4:-1673443 Msa0828750:CDS
GGAGGAGGAAGAGGAGGAGG+AGG 0.293981 5_4:-1673464 Msa0828750:CDS
TGGAACAATTACTATTTCTA+AGG 0.295449 5_4:-1670379 Msa0828750:CDS
TCTGTTGTTACTGTTTGTTT+TGG 0.309542 5_4:-1669714 Msa0828750:CDS
GCGAGATGTAGGGCTGCTTA+TGG 0.310927 5_4:-1670000 Msa0828750:intron
AGAGGAAGAGGAGGAGGAAG+AGG 0.319434 5_4:-1672995 Msa0828750:CDS
AGAGGAAGAGGAGGAGGAAG+AGG 0.319434 5_4:-1673557 Msa0828750:CDS
AGAGGAAGAGGAGGAGGAAG+AGG 0.319434 5_4:-1673599 Msa0828750:CDS
AGAGGAAGAGGAGGAGGAAG+AGG 0.319434 5_4:-1673725 Msa0828750:CDS
GGAAGAAGAGGAGGAGGAAG+AGG 0.321085 5_4:-1672719 Msa0828750:CDS
GGAGGAAGAGGAGGAGGAAG+AGG 0.321085 5_4:-1672929 Msa0828750:CDS
GGAGGAAGAGGAGGAGGAAG+AGG 0.321085 5_4:-1672941 Msa0828750:CDS
GGAGGAAGAGGAGGAGGAAG+AGG 0.321085 5_4:-1672983 Msa0828750:CDS
GGAGGAAGAGGAGGAGGAAG+AGG 0.321085 5_4:-1673208 Msa0828750:CDS
GGAGGAAGAGGAGGAGGAAG+AGG 0.321085 5_4:-1673220 Msa0828750:CDS
GGAAGAAGAGGAGGAGGAAG+AGG 0.321085 5_4:-1673232 Msa0828750:CDS
GGAGGAAGAGGAGGAGGAAG+AGG 0.321085 5_4:-1673497 Msa0828750:CDS
GGAGGAAGAGGAGGAGGAAG+AGG 0.321085 5_4:-1673713 Msa0828750:CDS
GGAGGAAGAGGAGGAGGAAG+AGG 0.321085 5_4:-1673926 Msa0828750:CDS
AGAGGAAGAGGAGGAGGAGG+AGG 0.325244 5_4:-1673479 Msa0828750:CDS
AGAGGAAGAGGAGGAGGAGG+AGG 0.325244 5_4:-1673515 Msa0828750:CDS
GGAGGAAGAGGAGGAGGAGG+AGG 0.326894 5_4:-1672881 Msa0828750:CDS
GGAGGAAGAGGAGGAGGAGG+AGG 0.326894 5_4:-1672899 Msa0828750:CDS
GGAGGAAGAGGAGGAGGAGG+AGG 0.326894 5_4:-1672917 Msa0828750:CDS
GGAGGAAGAGGAGGAGGAGG+AGG 0.326894 5_4:-1673440 Msa0828750:CDS
TTTCTGCCTGCTGCGCAGGC+TGG 0.331640 5_4:-1669754 Msa0828750:CDS
GGAGGAGGAGGACGAGGAAG+AGG 0.332863 5_4:-1673154 Msa0828750:CDS
GGAGGAGGAGGAAGAGGAAG+AGG 0.337961 5_4:-1672650 Msa0828750:CDS
GGAGGAGGAGGAAGAGGAAG+AGG 0.337961 5_4:-1672869 Msa0828750:CDS
GGAGGAGGAGGAAGAGGAAG+AGG 0.337961 5_4:-1673428 Msa0828750:CDS
GCAGGCTGGTTGTTGCTGTT+CGG 0.342764 5_4:-1669740 Msa0828750:CDS
AGAGGAGGAGGAAGAGGAAG+AGG 0.344008 5_4:-1673491 Msa0828750:CDS
CGAGGAAGAGGAGGAGGAAG+AGG 0.344146 5_4:-1673142 Msa0828750:CDS
ATATAGACCCTAGTATAAAA+AGG 0.351811 5_4:-1670290 Msa0828750:CDS
AGAGGAAGAGGAGGAGGAAG+AGG 0.353375 5_4:-1672857 Msa0828750:CDS
AGAGGAAGAGGAGGAGGAAG+AGG 0.353375 5_4:-1672953 Msa0828750:CDS
AGAGGAAGAGGAGGAGGAAG+AGG 0.353375 5_4:-1673416 Msa0828750:CDS
GGAAGAAGAGGAGGAGGAAG+AGG 0.355026 5_4:-1673533 Msa0828750:CDS
GGAAGAAGAGGAGGAGGAAG+AGG 0.355026 5_4:-1673575 Msa0828750:CDS
GGAGGAAGAGGAAGAGGAGG+AGG 0.356366 5_4:-1672863 Msa0828750:CDS
GGAGGAAGAGGAAGAGGAGG+AGG 0.356366 5_4:-1673422 Msa0828750:CDS
GGAGGAAGAGGAAGAGGAGG+AGG 0.356366 5_4:-1673485 Msa0828750:CDS
GGAGGAGGAGGAAGAGGAGG+AGG 0.356366 5_4:-1673503 Msa0828750:CDS
GGAGGAAGAGGAAGAGGAGG+AGG 0.356366 5_4:-1673521 Msa0828750:CDS
GGAGGAAGAGGAAGAGGAGG+AGG 0.356366 5_4:-1673563 Msa0828750:CDS
GGAAGAGGAGGAAGAGGAGG+AGG 0.356366 5_4:-1673932 Msa0828750:CDS
GGAGGAGGAAGAGGAGGAGG+AGG 0.358190 5_4:-1672710 Msa0828750:CDS
GGAGGAGGAAGAGGAGGAGG+AGG 0.358190 5_4:-1672920 Msa0828750:CDS
GGAGGAGGAAGAGGAGGAGG+AGG 0.358190 5_4:-1673199 Msa0828750:CDS
GGAAGAGGAAGAGGAGGAGG+AGG 0.358190 5_4:-1673482 Msa0828750:CDS
GGAAGAGGAAGAGGAGGAGG+AGG 0.358190 5_4:-1673518 Msa0828750:CDS
AGAGGAGGAGGAAGAGGAGG+AGG 0.362413 5_4:-1672713 Msa0828750:CDS
AGAGGAGGAGGAAGAGGAGG+AGG 0.362413 5_4:-1672923 Msa0828750:CDS
AGAGGAGGAGGAAGAGGAGG+AGG 0.362413 5_4:-1672935 Msa0828750:CDS
AGAGGAGGAGGAAGAGGAGG+AGG 0.362413 5_4:-1672947 Msa0828750:CDS
AGAGGAGGAGGAAGAGGAGG+AGG 0.362413 5_4:-1672989 Msa0828750:CDS
AGAGGAGGAGGAAGAGGAGG+AGG 0.362413 5_4:-1673202 Msa0828750:CDS
AGAGGAGGAGGAAGAGGAGG+AGG 0.362413 5_4:-1673214 Msa0828750:CDS
AGAGGAGGAGGAAGAGGAGG+AGG 0.362413 5_4:-1673719 Msa0828750:CDS
AGAGGAAGAGGAGGAGGAAG+AGG 0.364853 5_4:-1674242 Msa0828750:CDS
TTAAAATATCTTGATTTGCT+TGG 0.366169 5_4:+1670324 None:intergenic
GGAGGACGAGGAAGAGGAGG+AGG 0.368145 5_4:-1673148 Msa0828750:CDS
AGAAGAAGAGGAGGAGGAAG+AGG 0.369873 5_4:-1673256 Msa0828750:CDS
GGAGGAAGAGGAAGAGGAAG+AGG 0.371902 5_4:-1672644 Msa0828750:CDS
GGAGGAAGAGGAAGAGGAAG+AGG 0.371902 5_4:-1672845 Msa0828750:CDS
GGAGGAAGAGGAAGAGGAAG+AGG 0.371902 5_4:-1673130 Msa0828750:CDS
GGAGGAAGAGGAAGAGGAAG+AGG 0.371902 5_4:-1673404 Msa0828750:CDS
GGAAGAAGAGGAAGAGGAAG+AGG 0.371902 5_4:-1673677 Msa0828750:CDS
AGAGGAGGAAGAGGAGGAAG+AGG 0.372076 5_4:-1673938 Msa0828750:CDS
GGAGGAAGAAGAGGAGGAAG+AGG 0.373726 5_4:-1673947 Msa0828750:CDS
GGAGGACGAGGAGGAGGAGG+AGG 0.376602 5_4:-1673166 Msa0828750:CDS
AGAGGAGGAGGAAGAGGAAG+AGG 0.377949 5_4:-1672851 Msa0828750:CDS
AGAAGAGGAGGAAGAGGAAG+AGG 0.377949 5_4:-1673007 Msa0828750:CDS
AGAGGAGGAGGAAGAGGAAG+AGG 0.377949 5_4:-1673136 Msa0828750:CDS
AGAGGAGGAGGAAGAGGAAG+AGG 0.377949 5_4:-1673410 Msa0828750:CDS
AGAGGAGGAGGAAGAGGAAG+AGG 0.377949 5_4:-1673527 Msa0828750:CDS
AGAGGAGGAGGAAGAGGAAG+AGG 0.377949 5_4:-1673569 Msa0828750:CDS
AGAAGAGGAGGAAGAGGAAG+AGG 0.377949 5_4:-1673737 Msa0828750:CDS
AGAGGAGGAAGAAGAGGAAG+AGG 0.379773 5_4:-1672965 Msa0828750:CDS
GGAGGAAGAAGAGGAGGAAG+AGG 0.390224 5_4:-1673013 Msa0828750:CDS
GGAGGAAGAAGAGGAGGAAG+AGG 0.390224 5_4:-1673743 Msa0828750:CDS
GGAGGAAGAAGAGGAGGAAG+AGG 0.390224 5_4:-1673998 Msa0828750:CDS
AGAGGAAGAGGAAGAGGAAG+AGG 0.394447 5_4:-1672609 Msa0828750:CDS
AAGAGAAGAGGAAGAGGAAG+AGG 0.394447 5_4:-1672615 Msa0828750:CDS
AGAGGAAGAGGAAGAGGAAG+AGG 0.394447 5_4:-1672638 Msa0828750:CDS
AGAAGAAGAGGAAGAGGAAG+AGG 0.394447 5_4:-1673611 Msa0828750:CDS
AGAAGAGGAGGAAGAGGAAG+AGG 0.394447 5_4:-1673992 Msa0828750:CDS
AGAGGAAGAAGAAGAGGAAG+AGG 0.396271 5_4:-1672591 Msa0828750:CDS
AGAGGAGGAAGAAGAGGAAG+AGG 0.396271 5_4:-1673683 Msa0828750:CDS
AGAAGAGGAAGAAGAGGAAG+AGG 0.396271 5_4:-1674157 Msa0828750:CDS
GGAAGAAGAGGAAGAGGAGG+AGG 0.398803 5_4:-1672959 Msa0828750:CDS
GGAGGAAGAGGAAGAGGAGG+AGG 0.398803 5_4:-1673001 Msa0828750:CDS
GGAGGAAGAGGAAGAGGAGG+AGG 0.398803 5_4:-1673731 Msa0828750:CDS
GGAGGAGGAAGAAGAGGAGG+AGG 0.400627 5_4:-1672725 Msa0828750:CDS
AGAGGAGGAGGAAGAGGAGG+AGG 0.404851 5_4:-1673226 Msa0828750:CDS
AGAGGAGGAAGAAGAGGAGG+AGG 0.406675 5_4:-1673238 Msa0828750:CDS
AGAGGAGGAAGAAGAGGAGG+AGG 0.406675 5_4:-1673539 Msa0828750:CDS
AGAGGAGGAAGAAGAGGAGG+AGG 0.406675 5_4:-1673581 Msa0828750:CDS
GGATATGATAACCTTACATT+CGG 0.409109 5_4:-1670195 Msa0828750:CDS
CAGGCAGAAAGCAGCACCAG+TGG 0.409934 5_4:+1669767 None:intergenic
ACTATTTCTAAGGTTGCTCT+TGG 0.411911 5_4:-1670369 Msa0828750:CDS
GGAGGAAGAGGAGGAAGAAG+AGG 0.415155 5_4:-1673244 Msa0828750:CDS
GGAGGAAGAGGAGGAAGAAG+AGG 0.415155 5_4:-1673545 Msa0828750:CDS
GGAGGAAGAGGAGGAAGAAG+AGG 0.415155 5_4:-1673587 Msa0828750:CDS
GGAGGAAGAGGAGGAAGAAG+AGG 0.415155 5_4:-1673701 Msa0828750:CDS
GGAGGAAGAGGAGGAAGAAG+AGG 0.415155 5_4:-1673914 Msa0828750:CDS
AGAGGAAGAGGAAGAGGAGG+AGG 0.421348 5_4:-1673605 Msa0828750:CDS
AGAGGAAGAGGAAGAGGAGG+AGG 0.421348 5_4:-1673671 Msa0828750:CDS
AGAAGAAGAGGAAGAGGAGG+AGG 0.421348 5_4:-1674248 Msa0828750:CDS
TTAAATTTCATGCCAACCTT+AGG 0.424975 5_4:+1670636 None:intergenic
AAGTGAGGCGGCTTCGACTT+GGG 0.428800 5_4:-1670143 Msa0828750:CDS
AAGAGGAAGAGAAGAGGAAG+AGG 0.428919 5_4:-1672621 Msa0828750:CDS
AGAGGAAGAAGAGGAAGAAG+AGG 0.429220 5_4:-1674073 Msa0828750:CDS
AGAGGAAGAAGAGGAAGAAG+AGG 0.429220 5_4:-1674103 Msa0828750:CDS
AGAGGAAGAAGAGGAAGAAG+AGG 0.429220 5_4:-1674163 Msa0828750:CDS
GGAGGAGGACGAGGAAGAGG+AGG 0.431263 5_4:-1673151 Msa0828750:CDS
CGAGATGTAGGGCTGCTTAT+GGG 0.435390 5_4:-1669999 Msa0828750:intron
AGAAGAGGAGGAGGAAGAGG+AGG 0.437336 5_4:-1672716 Msa0828750:CDS
AGAAGAGGAGGAGGAAGAGG+AGG 0.437336 5_4:-1673229 Msa0828750:CDS
GGAAGAGGAGGAGGAAGAGG+AGG 0.438987 5_4:-1672926 Msa0828750:CDS
GGAAGAGGAGGAGGAAGAGG+AGG 0.438987 5_4:-1672938 Msa0828750:CDS
GGAAGAGGAGGAGGAAGAGG+AGG 0.438987 5_4:-1672950 Msa0828750:CDS
GGAAGAGGAGGAGGAAGAGG+AGG 0.438987 5_4:-1672980 Msa0828750:CDS
GGAAGAGGAGGAGGAAGAGG+AGG 0.438987 5_4:-1672992 Msa0828750:CDS
GGAAGAGGAGGAGGAAGAGG+AGG 0.438987 5_4:-1673205 Msa0828750:CDS
GGAAGAGGAGGAGGAAGAGG+AGG 0.438987 5_4:-1673217 Msa0828750:CDS
GGAAGAGGAGGAGGAAGAGG+AGG 0.438987 5_4:-1673710 Msa0828750:CDS
GGAAGAGGAGGAGGAAGAGG+AGG 0.438987 5_4:-1673722 Msa0828750:CDS
GGAAGAGGAGGAGGAAGAGG+AGG 0.438987 5_4:-1673923 Msa0828750:CDS
GGAGGAAGAGGAGGAAGAGG+AGG 0.438987 5_4:-1673935 Msa0828750:CDS
TACTTACATTAATCCAAGCT+TGG 0.439441 5_4:+1670250 None:intergenic
ACGAGTGGAGTTGGTGTCCC+CGG 0.443291 5_4:-1669898 Msa0828750:CDS
TAGCATGAAAACACATTGTA+AGG 0.444794 5_4:-1670430 Msa0828750:CDS
TGGAGGTTAATGACCAAGCT+TGG 0.446409 5_4:-1670263 Msa0828750:CDS
AAACATACATGCCGGAGTAT+TGG 0.447153 5_4:+1669922 None:intergenic
GGAGGAAGAAGAGGAAGAAG+AGG 0.448264 5_4:-1674112 Msa0828750:CDS
CTGCTTATGGGATGAGTTAG+TGG 0.448679 5_4:-1669987 Msa0828750:CDS
GGAGGAAGAGGAGGAAGAAG+AGG 0.449096 5_4:-1672971 Msa0828750:CDS
GGAAGAAGAGGAGGAAGAAG+AGG 0.449096 5_4:-1673022 Msa0828750:CDS
GGAAGAAGAGGAGGAAGAAG+AGG 0.449096 5_4:-1673752 Msa0828750:CDS
GGAAGAAGAGGAGGAAGAAG+AGG 0.449096 5_4:-1673956 Msa0828750:CDS
AGAAGAAGAAGAGGAAGAAG+AGG 0.455571 5_4:-1673800 Msa0828750:CDS
AGAAGAAGAAGAGGAAGAAG+AGG 0.455571 5_4:-1674043 Msa0828750:CDS
AGAAGAAGAAGAGGAAGAAG+AGG 0.455571 5_4:-1674332 Msa0828750:CDS
GGAAGAGGAAGAAGAAGAAG+AGG 0.457221 5_4:-1672830 Msa0828750:CDS
GGAAGAAGAAGAGGAAGAAG+AGG 0.457221 5_4:-1673070 Msa0828750:CDS
GGAAGAGGAAGAAGAAGAAG+AGG 0.457221 5_4:-1673389 Msa0828750:CDS
GGAAGAAGAAGAGGAAGAAG+AGG 0.457221 5_4:-1674082 Msa0828750:CDS
GGAAGAGGAAGAAGAAGAAG+AGG 0.457221 5_4:-1674142 Msa0828750:CDS
AGAAGAGGAGGAGGAAGAAG+AGG 0.460077 5_4:-1672731 Msa0828750:CDS
AGAAGAAGAGGAGGAAGAAG+AGG 0.460077 5_4:-1673034 Msa0828750:CDS
AGAAGAAGAGGAGGAAGAAG+AGG 0.460077 5_4:-1673764 Msa0828750:CDS
AGAAGAAGAGGAGGAAGAAG+AGG 0.460077 5_4:-1673968 Msa0828750:CDS
AGAAGAAGAGGAGGAAGAAG+AGG 0.460077 5_4:-1674007 Msa0828750:CDS
GGAAGAAGAGGAGGAAGAAG+AGG 0.461727 5_4:-1673689 Msa0828750:CDS
GGAAGAAGAGGAGGAAGAAG+AGG 0.461727 5_4:-1673902 Msa0828750:CDS
GGAAGAAGAGGAGGAAGAAG+AGG 0.461727 5_4:-1674121 Msa0828750:CDS
AGAGGAGGAAGAGGAAGAGG+AGG 0.466311 5_4:-1673004 Msa0828750:CDS
AGAAGAGGAAGAGGAAGAGG+AGG 0.466311 5_4:-1673674 Msa0828750:CDS
AGAGGAGGAAGAGGAAGAGG+AGG 0.466311 5_4:-1673734 Msa0828750:CDS
AGAAGAAGAAGAGGAAGAAG+AGG 0.467350 5_4:-1674172 Msa0828750:CDS
AGAGGAAGAGGAAGAAGAAG+AGG 0.467774 5_4:-1672597 Msa0828750:CDS
AGAGGAAGAGGAAGAAGAAG+AGG 0.467774 5_4:-1673118 Msa0828750:CDS
AGAGGAAGAGGAAGAAGAAG+AGG 0.467774 5_4:-1673980 Msa0828750:CDS
GGAGGAAGAAGAGGAAGAGG+AGG 0.467961 5_4:-1672962 Msa0828750:CDS
AGAAGAGGAAGAAGAAGAGG+AGG 0.469246 5_4:-1673043 Msa0828750:CDS
AGAAGAGGAAGAAGAAGAGG+AGG 0.469246 5_4:-1673773 Msa0828750:CDS
GGAAGAAGAGGAAGAAGAAG+AGG 0.470684 5_4:-1673058 Msa0828750:CDS
GGAAGAAGAGGAAGAAGAAG+AGG 0.470684 5_4:-1673788 Msa0828750:CDS
GGAAGAAGAGGAAGAAGAAG+AGG 0.470684 5_4:-1674091 Msa0828750:CDS
AGAAGAAGAAGAGGAAGAAG+AGG 0.472965 5_4:-1674133 Msa0828750:CDS
GGAGGAGGAAGAGGAAGAGG+AGG 0.475436 5_4:-1672866 Msa0828750:CDS
GGAGGAGGAAGAGGAAGAGG+AGG 0.475436 5_4:-1673425 Msa0828750:CDS
GGAGGAGGAAGAGGAAGAGG+AGG 0.475436 5_4:-1673488 Msa0828750:CDS
GGAGGAGGAAGAGGAAGAGG+AGG 0.475436 5_4:-1673524 Msa0828750:CDS
GGAGGAGGAAGAGGAAGAGG+AGG 0.475436 5_4:-1673566 Msa0828750:CDS
AGAAGAAGAGGAAGAAGAAG+AGG 0.476731 5_4:-1672818 Msa0828750:CDS
AGAAGAAGAGGAAGAAGAAG+AGG 0.476731 5_4:-1673079 Msa0828750:CDS
AGAAGAAGAGGAAGAAGAAG+AGG 0.476731 5_4:-1673377 Msa0828750:CDS
AGAAGAGGAAGAGGAAGAGG+AGG 0.478942 5_4:-1673608 Msa0828750:CDS
AGAAGAAGAAGAGGAAGAGG+AGG 0.478942 5_4:-1674251 Msa0828750:CDS
GGAAGAGGAAGAAGAAGAGG+AGG 0.480592 5_4:-1673977 Msa0828750:CDS
AAGAGGAGAAGAAGAAGAAG+AGG 0.480675 5_4:-1672574 Msa0828750:CDS
GGAAGAGGAGGAGGAAGAGG+AGG 0.481424 5_4:-1673554 Msa0828750:CDS
GGAAGAGGAGGAGGAAGAGG+AGG 0.481424 5_4:-1673596 Msa0828750:CDS
GGAAGAGGAGGAAGAAGAGG+AGG 0.481424 5_4:-1673698 Msa0828750:CDS
GGAAGAGGAGGAAGAAGAGG+AGG 0.481424 5_4:-1673911 Msa0828750:CDS
GGAAGAAGAGGAGGAAGAGG+AGG 0.481424 5_4:-1673944 Msa0828750:CDS
AGAAGAAGAGGAAGAAGAGG+AGG 0.482709 5_4:-1674130 Msa0828750:CDS
AGAGGAGGAGGAAGAAGAGG+AGG 0.487471 5_4:-1672728 Msa0828750:CDS
GAGGAAGAGGAGGAGGAAGA+GGG 0.488585 5_4:-1674241 Msa0828750:intron
GGAAGAGGAGGAAGAAGAGG+AGG 0.488899 5_4:-1673241 Msa0828750:CDS
GGAAGAGGAGGAAGAAGAGG+AGG 0.488899 5_4:-1673542 Msa0828750:CDS
GGAAGAGGAGGAAGAAGAGG+AGG 0.488899 5_4:-1673584 Msa0828750:CDS
AGGTTAAAGTGTTGACTTGG+AGG 0.490511 5_4:-1669961 Msa0828750:CDS
AGAAGAGGAGGAGGAAGAGG+AGG 0.492405 5_4:-1673253 Msa0828750:CDS
ATGGGATGAGTTAGTGGAGA+AGG 0.492762 5_4:-1669981 Msa0828750:CDS
AGAAGAAGAGGAAGAAGAAG+AGG 0.494125 5_4:-1673046 Msa0828750:CDS
AGAAGAAGAGGAAGAAGAAG+AGG 0.494125 5_4:-1673776 Msa0828750:CDS
GATGAACGAAGAAGAAGAAG+AGG 0.495953 5_4:-1674181 Msa0828750:intron
AGAAGAGGAGGAAGAAGAGG+AGG 0.500102 5_4:-1673019 Msa0828750:CDS
AGAAGAGGAGGAAGAAGAGG+AGG 0.500102 5_4:-1673031 Msa0828750:CDS
AGAAGAGGAGGAAGAAGAGG+AGG 0.500102 5_4:-1673749 Msa0828750:CDS
AGAAGAGGAGGAAGAAGAGG+AGG 0.500102 5_4:-1673761 Msa0828750:CDS
AGAAGAGGAGGAAGAAGAGG+AGG 0.500102 5_4:-1673953 Msa0828750:CDS
AGAAGAGGAGGAAGAAGAGG+AGG 0.500102 5_4:-1673965 Msa0828750:CDS
AGAAGAGGAGGAAGAAGAGG+AGG 0.500102 5_4:-1674004 Msa0828750:CDS
CGAGTGGAGTTGGTGTCCCC+GGG 0.504042 5_4:-1669897 Msa0828750:CDS
AAAGTGAGGCGGCTTCGACT+TGG 0.512577 5_4:-1670144 Msa0828750:CDS
TTGACTTGGAGGTGGTTGTT+CGG 0.529604 5_4:-1669950 Msa0828750:CDS
AAGAGGAAGAGGAAGAGAAG+AGG 0.529674 5_4:-1672627 Msa0828750:CDS
TTACCTCAAAAGACACTCCC+GGG 0.529717 5_4:+1669880 None:intergenic
TACTCACATAGCTTCTTGCA+CGG 0.535718 5_4:+1670481 None:intergenic
AGAAGGTTAAAGTGTTGACT+TGG 0.538252 5_4:-1669964 Msa0828750:CDS
AGGCGGCTTCGACTTGGGAT+AGG 0.542513 5_4:-1670138 Msa0828750:CDS
GATATGATAACCTTACATTC+GGG 0.543620 5_4:-1670194 Msa0828750:CDS
AAATGAAGATGATGAACCTA+AGG 0.544931 5_4:-1670652 Msa0828750:CDS
GAAGATGATGAACCTAAGGT+TGG 0.554642 5_4:-1670648 Msa0828750:CDS
TGCCAACCCAAAACCGCCCA+AGG 0.574248 5_4:+1669683 None:intergenic
AAGCTTGGATTAATGTAAGT+AGG 0.576078 5_4:-1670248 Msa0828750:CDS
ATTACCTCAAAAGACACTCC+CGG 0.576503 5_4:+1669879 None:intergenic
CATGACAGAACAGCAGCCAC+TGG 0.578553 5_4:-1669783 Msa0828750:intron
CACTCGTAAAACATACATGC+CGG 0.583300 5_4:+1669914 None:intergenic
AATGTATGTGTGTCTTCAGA+TGG 0.584390 5_4:-1670399 Msa0828750:CDS
TTAAAGTGTTGACTTGGAGG+TGG 0.605815 5_4:-1669958 Msa0828750:CDS
GAAACTACATAGACAAAGTG+AGG 0.617900 5_4:-1670158 Msa0828750:CDS
AGAAGAGGGTGAAAATTGTG+AGG 0.627046 5_4:-1670688 Msa0828750:CDS
GTTCGGAAGATCCAATACTC+CGG 0.653042 5_4:-1669933 Msa0828750:CDS
TCTATGGTTGTTGAAGCAAG+TGG 0.653447 5_4:-1670216 Msa0828750:CDS
AAAACAAACAGTAACAACAG+AGG 0.728183 5_4:+1669716 None:intergenic
TACCTCAAAAGACACTCCCG+GGG 0.737909 5_4:+1669881 None:intergenic
ACTACATAGACAAAGTGAGG+CGG 0.739143 5_4:-1670155 Msa0828750:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAATAAATAAATATA+TGG - chr5_4:1669772-1669791 Msa0828750:CDS 0.0%
!! AATATAAAAAGGAAATTAGA+TGG + chr5_4:1669732-1669751 None:intergenic 15.0%
!!! AAAAAAAGTATTTTACTCTA+GGG - chr5_4:1674010-1674029 Msa0828750:CDS 15.0%
!!! ACTAACAAAATAATTTTGAA+TGG + chr5_4:1674418-1674437 None:intergenic 15.0%
!! GAAAATCAAATTTCAATTGA+TGG + chr5_4:1669992-1670011 None:intergenic 20.0%
!! ATCAACTGAATTAAAAGTAA+AGG + chr5_4:1670095-1670114 None:intergenic 20.0%
!!! TAAAAAATTTGTTGCATTAG+TGG - chr5_4:1670133-1670152 Msa0828750:CDS 20.0%
!!! GAAAAAAAGTATTTTACTCT+AGG - chr5_4:1674009-1674028 Msa0828750:CDS 20.0%
!!! ATTTGGCTTTAAAAGATTTT+TGG + chr5_4:1674067-1674086 None:intergenic 20.0%
!!! TTAAAATATCTTGATTTGCT+TGG + chr5_4:1674198-1674217 None:intergenic 20.0%
!!! TTAATGTAAGTAGGAATTTT+TGG - chr5_4:1674280-1674299 Msa0828750:CDS 20.0%
!!! TAGTGACTTTTATTATGTAA+TGG - chr5_4:1674452-1674471 Msa0828750:intron 20.0%
! TAAAAAGGAAATTAGATGGT+GGG + chr5_4:1669728-1669747 None:intergenic 25.0%
! ATAAAAAGGAAATTAGATGG+TGG + chr5_4:1669729-1669748 None:intergenic 25.0%
! AAAATCAGAACATAAGGTTA+TGG + chr5_4:1669882-1669901 None:intergenic 25.0%
! TTGAACAAAATCAGAACATA+AGG + chr5_4:1669888-1669907 None:intergenic 25.0%
! AAGAATTATGCTAGATGTAT+AGG - chr5_4:1673946-1673965 Msa0828750:CDS 25.0%
! AGCAAAATCAGTACAAAAAA+TGG - chr5_4:1673979-1673998 Msa0828750:CDS 25.0%
!!! TGGAACAATTACTATTTCTA+AGG - chr5_4:1674140-1674159 Msa0828750:CDS 25.0%
! ATATAGACCCTAGTATAAAA+AGG - chr5_4:1674229-1674248 Msa0828750:intron 25.0%
!!! CTTTTATTATGTAATGGATG+TGG - chr5_4:1674458-1674477 Msa0828750:intron 25.0%
!!! TCGTTTACGAAATGTTTTTT+GGG - chr5_4:1674491-1674510 Msa0828750:intron 25.0%
AAAAAGGAAATTAGATGGTG+GGG + chr5_4:1669727-1669746 None:intergenic 30.0%
AAGGAAGTAACATAAGGTTA+TGG + chr5_4:1669857-1669876 None:intergenic 30.0%
GTAGCAATTCTGATAAAAAG+AGG + chr5_4:1669958-1669977 None:intergenic 30.0%
! CAAATTTCAATTGATGGTTG+AGG + chr5_4:1669986-1670005 None:intergenic 30.0%
GAATTAAAAGTAAAGGCAAC+AGG + chr5_4:1670088-1670107 None:intergenic 30.0%
AAATGAAGATGATGAACCTA+AGG - chr5_4:1673867-1673886 Msa0828750:CDS 30.0%
TTAAATTTCATGCCAACCTT+AGG + chr5_4:1673886-1673905 None:intergenic 30.0%
! TATGCTAGATGTATAGGTTT+TGG - chr5_4:1673952-1673971 Msa0828750:CDS 30.0%
! TTACAATGTGTTTTCATGCT+AGG + chr5_4:1674090-1674109 None:intergenic 30.0%
TAGCATGAAAACACATTGTA+AGG - chr5_4:1674089-1674108 Msa0828750:CDS 30.0%
! CCAATCTCCTTTTTATACTA+GGG + chr5_4:1674239-1674258 None:intergenic 30.0%
! TCCAATCTCCTTTTTATACT+AGG + chr5_4:1674240-1674259 None:intergenic 30.0%
TAGTATAAAAAGGAGATTGG+AGG - chr5_4:1674239-1674258 Msa0828750:intron 30.0%
TACTTACATTAATCCAAGCT+TGG + chr5_4:1674272-1674291 None:intergenic 30.0%
AAGCTTGGATTAATGTAAGT+AGG - chr5_4:1674271-1674290 Msa0828750:CDS 30.0%
!!! AAGTAGGAATTTTTGGTCTA+TGG - chr5_4:1674287-1674306 Msa0828750:CDS 30.0%
GGATATGATAACCTTACATT+CGG - chr5_4:1674324-1674343 Msa0828750:CDS 30.0%
GATATGATAACCTTACATTC+GGG - chr5_4:1674325-1674344 Msa0828750:CDS 30.0%
!!! GTCGTTTACGAAATGTTTTT+TGG - chr5_4:1674490-1674509 Msa0828750:intron 30.0%
AAAACAAACAGTAACAACAG+AGG + chr5_4:1674806-1674825 None:intergenic 30.0%
! TCTGTTGTTACTGTTTGTTT+TGG - chr5_4:1674805-1674824 Msa0828750:intron 30.0%
!! CTGTTGTTACTGTTTGTTTT+GGG - chr5_4:1674806-1674825 Msa0828750:intron 30.0%
ATATATGGAAGAGACAATCG+CGG - chr5_4:1669787-1669806 Msa0828750:intron 35.0%
GTAACATAAGGTTATGGAGA+AGG + chr5_4:1669851-1669870 None:intergenic 35.0%
ATGGAGAAGGAAGTAACATA+AGG + chr5_4:1669863-1669882 None:intergenic 35.0%
AGAACATAAGGTTATGGAGA+AGG + chr5_4:1669876-1669895 None:intergenic 35.0%
TTCAACTGGATGCTAAAACT+GGG + chr5_4:1670014-1670033 None:intergenic 35.0%
CTTACTATTGTCTCTTCAAC+TGG + chr5_4:1670028-1670047 None:intergenic 35.0%
AGAAGAAGAAGAAGAAGAAG+AGG - chr5_4:1670178-1670197 Msa0828750:CDS 35.0%
AGAAGAAGAAGAAGAAGAAG+AGG - chr5_4:1670178-1670197 Msa0828750:CDS 35.0%
AGAAGAAGAAGAAGAAGAAG+AGG - chr5_4:1670178-1670197 Msa0828750:CDS 35.0%
AGAAGAAGAAGAAGAAGAAG+AGG - chr5_4:1670178-1670197 Msa0828750:CDS 35.0%
AGAAGAAGAAGAAGAAGAAG+AGG - chr5_4:1670178-1670197 Msa0828750:CDS 35.0%
AGAAGAAGAAGAAGAAGAAG+AGG - chr5_4:1670178-1670197 Msa0828750:CDS 35.0%
AGAAGAAGAAGAAGAAGAAG+AGG - chr5_4:1670178-1670197 Msa0828750:CDS 35.0%
AGAAGAAGAAGAAGAAGAAG+AGG - chr5_4:1670178-1670197 Msa0828750:CDS 35.0%
AGAAGAAGAAGAAGAAGAAG+AGG - chr5_4:1670178-1670197 Msa0828750:CDS 35.0%
GAAGAAGAAGAAGAAGAAGA+GGG - chr5_4:1670176-1670195 Msa0828750:CDS 35.0%
! TGTGTTTTCATGCTAGGATT+TGG + chr5_4:1674084-1674103 None:intergenic 35.0%
AATGTATGTGTGTCTTCAGA+TGG - chr5_4:1674120-1674139 Msa0828750:CDS 35.0%
!! ACTATTTCTAAGGTTGCTCT+TGG - chr5_4:1674150-1674169 Msa0828750:CDS 35.0%
CCCTAGTATAAAAAGGAGAT+TGG - chr5_4:1674236-1674255 Msa0828750:intron 35.0%
!!! CATCTTTTTTCCCGAATGTA+AGG + chr5_4:1674338-1674357 None:intergenic 35.0%
GAAACTACATAGACAAAGTG+AGG - chr5_4:1674361-1674380 Msa0828750:CDS 35.0%
!! AGAAGGTTAAAGTGTTGACT+TGG - chr5_4:1674555-1674574 Msa0828750:intron 35.0%
!!! TTGTTTTGGGACATTTTCCT+TGG - chr5_4:1674819-1674838 Msa0828750:intron 35.0%
!!! TGTTTTGGGACATTTTCCTT+GGG - chr5_4:1674820-1674839 Msa0828750:intron 35.0%
ATTCTTTCGTGCAATTCGTG+GGG + chr5_4:1669698-1669717 None:intergenic 40.0%
CATTCTTTCGTGCAATTCGT+GGG + chr5_4:1669699-1669718 None:intergenic 40.0%
TCATTCTTTCGTGCAATTCG+TGG + chr5_4:1669700-1669719 None:intergenic 40.0%
TATATGGAAGAGACAATCGC+GGG - chr5_4:1669788-1669807 Msa0828750:intron 40.0%
AAAAGAGGCAGTAGCAGAAA+CGG + chr5_4:1669943-1669962 None:intergenic 40.0%
CTTCAACTGGATGCTAAAAC+TGG + chr5_4:1670015-1670034 None:intergenic 40.0%
AGAAGAAGAAGAGGAAGAAG+AGG - chr5_4:1670187-1670206 Msa0828750:CDS 40.0%
AGAAGAAGAAGAAGAGGAAG+AGG - chr5_4:1670184-1670203 Msa0828750:CDS 40.0%
GATGAACGAAGAAGAAGAAG+AGG - chr5_4:1670338-1670357 Msa0828750:CDS 40.0%
AGAAGAAGAAGAGGAAGAAG+AGG - chr5_4:1670187-1670206 Msa0828750:CDS 40.0%
AGAAGAAGAAGAGGAAGAAG+AGG - chr5_4:1670187-1670206 Msa0828750:CDS 40.0%
GGAAGAAGAAGAAGAAGAAG+AGG - chr5_4:1670208-1670227 Msa0828750:CDS 40.0%
AGAAGAAGAAGAGGAAGAAG+AGG - chr5_4:1670187-1670206 Msa0828750:CDS 40.0%
AGAAGAAGAAGAAGAAGAGG+AGG - chr5_4:1670181-1670200 Msa0828750:CDS 40.0%
AGAGGAAGAAGAAGAAGAAG+AGG - chr5_4:1670205-1670224 Msa0828750:CDS 40.0%
AGAAGAAGAAGAGGAAGAAG+AGG - chr5_4:1670187-1670206 Msa0828750:CDS 40.0%
AGAAGAAGAGGAAGAAGAAG+AGG - chr5_4:1670647-1670666 Msa0828750:CDS 40.0%
AGAAGAAGAAGAAGAGGAAG+AGG - chr5_4:1670184-1670203 Msa0828750:CDS 40.0%
AGAAGAAGAGGAAGAAGAAG+AGG - chr5_4:1670647-1670666 Msa0828750:CDS 40.0%
AGAAGAAGAAGAAGAAGAGG+AGG - chr5_4:1670181-1670200 Msa0828750:CDS 40.0%
AGAAGAAGAGGAAGAAGAAG+AGG - chr5_4:1670647-1670666 Msa0828750:CDS 40.0%
AGAAGAAGAGGAAGAAGAAG+AGG - chr5_4:1670647-1670666 Msa0828750:CDS 40.0%
AGAAGAAGAGGAAGAAGAAG+AGG - chr5_4:1670647-1670666 Msa0828750:CDS 40.0%
AGAAGAAGAAGAAGAAGAGG+AGG - chr5_4:1670181-1670200 Msa0828750:CDS 40.0%
AAGAGGAGAAGAAGAAGAAG+AGG - chr5_4:1671945-1671964 Msa0828750:CDS 40.0%
AGAAGAAGAAGAAGAGGAGA+AGG - chr5_4:1671951-1671970 Msa0828750:CDS 40.0%
AGAAGAGGGTGAAAATTGTG+AGG - chr5_4:1673831-1673850 Msa0828750:CDS 40.0%
GAAGATGATGAACCTAAGGT+TGG - chr5_4:1673871-1673890 Msa0828750:CDS 40.0%
TACTCACATAGCTTCTTGCA+CGG + chr5_4:1674041-1674060 None:intergenic 40.0%
TCTATGGTTGTTGAAGCAAG+TGG - chr5_4:1674303-1674322 Msa0828750:CDS 40.0%
ACTACATAGACAAAGTGAGG+CGG - chr5_4:1674364-1674383 Msa0828750:CDS 40.0%
!! AGGTTAAAGTGTTGACTTGG+AGG - chr5_4:1674558-1674577 Msa0828750:intron 40.0%
!! TTAAAGTGTTGACTTGGAGG+TGG - chr5_4:1674561-1674580 Msa0828750:intron 40.0%
AAACATACATGCCGGAGTAT+TGG + chr5_4:1674600-1674619 None:intergenic 40.0%
CACTCGTAAAACATACATGC+CGG + chr5_4:1674608-1674627 None:intergenic 40.0%
! GTATGTTTTACGAGTGGAGT+TGG - chr5_4:1674612-1674631 Msa0828750:intron 40.0%
ATTACCTCAAAAGACACTCC+CGG + chr5_4:1674643-1674662 None:intergenic 40.0%
GAAACACACATAACCGCAAA+GGG + chr5_4:1674677-1674696 None:intergenic 40.0%
CTTTGCGGTTATGTGTGTTT+CGG - chr5_4:1674676-1674695 Msa0828750:intron 40.0%
! GGGTGGTATGTTTTCTGTTT+TGG - chr5_4:1674704-1674723 Msa0828750:intron 40.0%
!!! CGGGCACACGTTTTGATTTT+GGG - chr5_4:1669807-1669826 Msa0828750:intron 45.0%
GCAGAAACGGCAATGAATGT+TGG + chr5_4:1669930-1669949 None:intergenic 45.0%
AGAAGAAGAAGAGGAAGAGG+AGG - chr5_4:1670268-1670287 Msa0828750:CDS 45.0%
GGAAGAGGGTGAAAATTGTG+AGG - chr5_4:1670292-1670311 Msa0828750:CDS 45.0%
AGAGGAAGAAGAGGAAGAAG+AGG - chr5_4:1670196-1670215 Msa0828750:CDS 45.0%
AGAAGAGGAAGAAGAGGAAG+AGG - chr5_4:1670193-1670212 Msa0828750:CDS 45.0%
GGAAGAGGAAGAAGAAGAAG+AGG - chr5_4:1670377-1670396 Msa0828750:CDS 45.0%
AGAAGAAGAGGAAGAAGAGG+AGG - chr5_4:1670190-1670209 Msa0828750:CDS 45.0%
AGAGGAAGAAGAGGAAGAAG+AGG - chr5_4:1670196-1670215 Msa0828750:CDS 45.0%
GGAAGAAGAGGAAGAAGAAG+AGG - chr5_4:1670199-1670218 Msa0828750:CDS 45.0%
GGAAGAAGAAGAGGAAGAAG+AGG - chr5_4:1670437-1670456 Msa0828750:CDS 45.0%
AGAGGAAGAAGAGGAAGAAG+AGG - chr5_4:1670196-1670215 Msa0828750:CDS 45.0%
AGAAGAAGAGGAGGAAGAAG+AGG - chr5_4:1670512-1670531 Msa0828750:CDS 45.0%
AGAGGAAGAGGAAGAAGAAG+AGG - chr5_4:1670374-1670393 Msa0828750:CDS 45.0%
AGAAGAAGAGGAGGAAGAAG+AGG - chr5_4:1670512-1670531 Msa0828750:CDS 45.0%
GGAAGAAGAGGAAGAAGAAG+AGG - chr5_4:1670199-1670218 Msa0828750:CDS 45.0%
AGAAGAGGAAGAAGAAGAGG+AGG - chr5_4:1670431-1670450 Msa0828750:CDS 45.0%
AGAAGAAGAGGAGGAAGAAG+AGG - chr5_4:1670512-1670531 Msa0828750:CDS 45.0%
AGAAGAAGAGGAAGAGGAAG+AGG - chr5_4:1670908-1670927 Msa0828750:CDS 45.0%
GGAAGAGGAAGAAGAAGAAG+AGG - chr5_4:1670377-1670396 Msa0828750:CDS 45.0%
AGAAGAAGAAGAAGAGGAGG+AGG - chr5_4:1670506-1670525 Msa0828750:CDS 45.0%
AGAGGAAGAGGAAGAAGAAG+AGG - chr5_4:1670374-1670393 Msa0828750:CDS 45.0%
GGAAGAAGAAGAGGAAGAAG+AGG - chr5_4:1670437-1670456 Msa0828750:CDS 45.0%
GGAAGAAGAGGAAGAAGAAG+AGG - chr5_4:1670199-1670218 Msa0828750:CDS 45.0%
AGAAGAGGAAGAAGAAGAGG+AGG - chr5_4:1670431-1670450 Msa0828750:CDS 45.0%
AGAAGAAGAGGAGGAAGAAG+AGG - chr5_4:1670512-1670531 Msa0828750:CDS 45.0%
GGAAGAGGAAGAAGAAGAAG+AGG - chr5_4:1670377-1670396 Msa0828750:CDS 45.0%
AGAAGAAGAAGAAGAGGAGG+AGG - chr5_4:1670506-1670525 Msa0828750:CDS 45.0%
AAGAGGAAGAGGAAGAGAAG+AGG - chr5_4:1671892-1671911 Msa0828750:CDS 45.0%
AAGAGGAAGAGAAGAGGAAG+AGG - chr5_4:1671898-1671917 Msa0828750:CDS 45.0%
AAGAGAAGAGGAAGAGGAAG+AGG - chr5_4:1671904-1671923 Msa0828750:CDS 45.0%
AGAGGAAGAGGAAGAAGAAG+AGG - chr5_4:1670374-1670393 Msa0828750:CDS 45.0%
AGAGGAAGAAGAAGAGGAAG+AGG - chr5_4:1670434-1670453 Msa0828750:CDS 45.0%
TGGAGGTTAATGACCAAGCT+TGG - chr5_4:1674256-1674275 Msa0828750:CDS 45.0%
CTGCTTATGGGATGAGTTAG+TGG - chr5_4:1674532-1674551 Msa0828750:intron 45.0%
ATGGGATGAGTTAGTGGAGA+AGG - chr5_4:1674538-1674557 Msa0828750:intron 45.0%
!! TTGACTTGGAGGTGGTTGTT+CGG - chr5_4:1674569-1674588 Msa0828750:intron 45.0%
GTTCGGAAGATCCAATACTC+CGG - chr5_4:1674586-1674605 Msa0828750:intron 45.0%
! CGGCATGTATGTTTTACGAG+TGG - chr5_4:1674606-1674625 Msa0828750:intron 45.0%
TTACCTCAAAAGACACTCCC+GGG + chr5_4:1674642-1674661 None:intergenic 45.0%
!!! GGGAGTGTCTTTTGAGGTAA+TGG - chr5_4:1674642-1674661 Msa0828750:intron 45.0%
CGAAACACACATAACCGCAA+AGG + chr5_4:1674678-1674697 None:intergenic 45.0%
GTTATGTGTGTTTCGGCTGT+GGG - chr5_4:1674683-1674702 Msa0828750:intron 45.0%
TTATGTGTGTTTCGGCTGTG+GGG - chr5_4:1674684-1674703 Msa0828750:intron 45.0%
!! TTTGGGACATTTTCCTTGGG+CGG - chr5_4:1674823-1674842 Msa0828750:intron 45.0%
! ACATTTTCCTTGGGCGGTTT+TGG - chr5_4:1674829-1674848 Msa0828750:intron 45.0%
! CATTTTCCTTGGGCGGTTTT+GGG - chr5_4:1674830-1674849 Msa0828750:intron 45.0%
!! ATCAAAAAAATAATATAAAA+AGG + chr5_4:1669743-1669762 None:intergenic 5.0%
!!! GCGGGCACACGTTTTGATTT+TGG - chr5_4:1669806-1669825 Msa0828750:intron 50.0%
AGAAGAAGAGGAAGAGGAGG+AGG - chr5_4:1670271-1670290 Msa0828750:CDS 50.0%
GGAAGAAGAGGAGGAAGAAG+AGG - chr5_4:1670398-1670417 Msa0828750:CDS 50.0%
GGAGGAAGAAGAGGAAGAAG+AGG - chr5_4:1670407-1670426 Msa0828750:CDS 50.0%
AGAAGAGGAGGAAGAAGAGG+AGG - chr5_4:1670401-1670420 Msa0828750:CDS 50.0%
AGAAGAGGAGGAAGAGGAAG+AGG - chr5_4:1670527-1670546 Msa0828750:CDS 50.0%
GGAAGAGGAAGAAGAAGAGG+AGG - chr5_4:1670542-1670561 Msa0828750:CDS 50.0%
AGAAGAGGAGGAAGAAGAGG+AGG - chr5_4:1670401-1670420 Msa0828750:CDS 50.0%
GGAAGAAGAGGAGGAAGAAG+AGG - chr5_4:1670398-1670417 Msa0828750:CDS 50.0%
AGAAGAGGAGGAAGAAGAGG+AGG - chr5_4:1670401-1670420 Msa0828750:CDS 50.0%
GGAAGAAGAGGAGGAAGAAG+AGG - chr5_4:1670398-1670417 Msa0828750:CDS 50.0%
AGAAGAGGAGGAAGAAGAGG+AGG - chr5_4:1670401-1670420 Msa0828750:CDS 50.0%
GGAAGAAGAGGAGGAAGAAG+AGG - chr5_4:1670398-1670417 Msa0828750:CDS 50.0%
AGAAGAGGAGGAAGAAGAGG+AGG - chr5_4:1670401-1670420 Msa0828750:CDS 50.0%
AGAAGAGGAGGAAGAGGAAG+AGG - chr5_4:1670527-1670546 Msa0828750:CDS 50.0%
GGAAGAAGAGGAGGAAGAAG+AGG - chr5_4:1670398-1670417 Msa0828750:CDS 50.0%
AGAGGAGGAAGAAGAGGAAG+AGG - chr5_4:1670404-1670423 Msa0828750:CDS 50.0%
GGAAGAAGAGGAAGAGGAAG+AGG - chr5_4:1670368-1670387 Msa0828750:CDS 50.0%
AGAAGAGGAAGAGGAAGAGG+AGG - chr5_4:1670845-1670864 Msa0828750:CDS 50.0%
AGAAGAGGAAGAGGAAGAGG+AGG - chr5_4:1670845-1670864 Msa0828750:CDS 50.0%
AGAAGAAGAGGAGGAGGAAG+AGG - chr5_4:1671263-1671282 Msa0828750:CDS 50.0%
AGAAGAGGAGGAAGAAGAGG+AGG - chr5_4:1670401-1670420 Msa0828750:CDS 50.0%
GGAAGAAGAGGAGGAAGAAG+AGG - chr5_4:1670398-1670417 Msa0828750:CDS 50.0%
AGAAGAGGAGGAAGAAGAGG+AGG - chr5_4:1670401-1670420 Msa0828750:CDS 50.0%
AGAAGAGGAGGAAGAGGAAG+AGG - chr5_4:1670527-1670546 Msa0828750:CDS 50.0%
AGAGGAGGAAGAAGAGGAAG+AGG - chr5_4:1670404-1670423 Msa0828750:CDS 50.0%
AGAAGAGGAGGAGGAAGAAG+AGG - chr5_4:1671788-1671807 Msa0828750:CDS 50.0%
AGAGGAAGAGGAAGAGGAAG+AGG - chr5_4:1671121-1671140 Msa0828750:CDS 50.0%
AGAGGAAGAGGAAGAGGAAG+AGG - chr5_4:1671121-1671140 Msa0828750:CDS 50.0%
TTTGGGCAGATGCGAGATGT+AGG - chr5_4:1674508-1674527 Msa0828750:intron 50.0%
TTGGGCAGATGCGAGATGTA+GGG - chr5_4:1674509-1674528 Msa0828750:intron 50.0%
CGAGATGTAGGGCTGCTTAT+GGG - chr5_4:1674520-1674539 Msa0828750:intron 50.0%
TACCTCAAAAGACACTCCCG+GGG + chr5_4:1674641-1674660 None:intergenic 50.0%
!! ATGGTGTTGCTGTCCCTTTG+CGG - chr5_4:1674661-1674680 Msa0828750:intron 50.0%
GGTTATGTGTGTTTCGGCTG+TGG - chr5_4:1674682-1674701 Msa0828750:intron 50.0%
AGAGGAAGAGGAGGAGGAAG+AGG - chr5_4:1670277-1670296 Msa0828750:CDS 55.0%
GAGGAAGAGGAGGAGGAAGA+GGG - chr5_4:1670278-1670297 Msa0828750:CDS 55.0%
GGAGGAAGAAGAGGAGGAAG+AGG - chr5_4:1670521-1670540 Msa0828750:CDS 55.0%
GGAGGAAGAAGAGGAGGAAG+AGG - chr5_4:1670521-1670540 Msa0828750:CDS 55.0%
GGAAGAAGAGGAGGAAGAGG+AGG - chr5_4:1670524-1670543 Msa0828750:CDS 55.0%
AGAGGAGGAAGAGGAGGAAG+AGG - chr5_4:1670581-1670600 Msa0828750:CDS 55.0%
GGAGGAAGAGGAGGAAGAAG+AGG - chr5_4:1670605-1670624 Msa0828750:CDS 55.0%
GGAAGAGGAGGAAGAAGAGG+AGG - chr5_4:1670608-1670627 Msa0828750:CDS 55.0%
GGAGGAAGAAGAGGAGGAAG+AGG - chr5_4:1670521-1670540 Msa0828750:CDS 55.0%
AGAGGAGGAAGAGGAAGAGG+AGG - chr5_4:1670530-1670549 Msa0828750:CDS 55.0%
AGAGGAAGAGGAGGAGGAAG+AGG - chr5_4:1670277-1670296 Msa0828750:CDS 55.0%
GGAGGAAGAGGAGGAAGAAG+AGG - chr5_4:1670605-1670624 Msa0828750:CDS 55.0%
GGAAGAGGAGGAAGAAGAGG+AGG - chr5_4:1670608-1670627 Msa0828750:CDS 55.0%
AGAGGAAGAGGAAGAGGAGG+AGG - chr5_4:1670848-1670867 Msa0828750:CDS 55.0%
AGAGGAAGAGGAAGAGGAGG+AGG - chr5_4:1670848-1670867 Msa0828750:CDS 55.0%
AGAGGAAGAGGAGGAGGAAG+AGG - chr5_4:1670277-1670296 Msa0828750:CDS 55.0%
GGAGGAAGAGGAGGAAGAAG+AGG - chr5_4:1670605-1670624 Msa0828750:CDS 55.0%
GGAAGAGGAGGAAGAAGAGG+AGG - chr5_4:1670608-1670627 Msa0828750:CDS 55.0%
AGAGGAGGAAGAAGAGGAGG+AGG - chr5_4:1670518-1670537 Msa0828750:CDS 55.0%
GGAAGAAGAGGAGGAGGAAG+AGG - chr5_4:1670944-1670963 Msa0828750:CDS 55.0%
AGAGGAGGAGGAAGAGGAAG+AGG - chr5_4:1670950-1670969 Msa0828750:CDS 55.0%
AGAGGAAGAGGAGGAGGAAG+AGG - chr5_4:1670277-1670296 Msa0828750:CDS 55.0%
GGAGGAAGAGGAGGAAGAAG+AGG - chr5_4:1670605-1670624 Msa0828750:CDS 55.0%
GGAAGAGGAGGAAGAAGAGG+AGG - chr5_4:1670608-1670627 Msa0828750:CDS 55.0%
AGAGGAGGAAGAAGAGGAGG+AGG - chr5_4:1670518-1670537 Msa0828750:CDS 55.0%
GGAAGAAGAGGAGGAGGAAG+AGG - chr5_4:1670944-1670963 Msa0828750:CDS 55.0%
AGAGGAGGAGGAAGAGGAAG+AGG - chr5_4:1670950-1670969 Msa0828750:CDS 55.0%
AGAGGAGGAGGAAGAGGAAG+AGG - chr5_4:1670950-1670969 Msa0828750:CDS 55.0%
AGAGGAAGAGGAGGAGGAAG+AGG - chr5_4:1670277-1670296 Msa0828750:CDS 55.0%
AGAGGAGGAGGAAGAGGAAG+AGG - chr5_4:1670950-1670969 Msa0828750:CDS 55.0%
GGAGGAAGAGGAAGAGGAAG+AGG - chr5_4:1670533-1670552 Msa0828750:CDS 55.0%
AGAAGAGGAGGAGGAAGAGG+AGG - chr5_4:1670947-1670966 Msa0828750:CDS 55.0%
GGAGGAAGAGGAGGAAGAAG+AGG - chr5_4:1670605-1670624 Msa0828750:CDS 55.0%
GGAAGAGGAGGAAGAAGAGG+AGG - chr5_4:1670608-1670627 Msa0828750:CDS 55.0%
AGAGGAGGAAGAAGAGGAGG+AGG - chr5_4:1670518-1670537 Msa0828750:CDS 55.0%
GGAAGAAGAGGAGGAGGAAG+AGG - chr5_4:1670944-1670963 Msa0828750:CDS 55.0%
AGAAGAGGAGGAGGAAGAGG+AGG - chr5_4:1670947-1670966 Msa0828750:CDS 55.0%
AGAGGAGGAGGAAGAGGAAG+AGG - chr5_4:1670950-1670969 Msa0828750:CDS 55.0%
GGAGGAAGAGGAAGAGGAAG+AGG - chr5_4:1670533-1670552 Msa0828750:CDS 55.0%
GGAGGAAGAAGAGGAGGAAG+AGG - chr5_4:1670521-1670540 Msa0828750:CDS 55.0%
AGAGGAGGAAGAGGAAGAGG+AGG - chr5_4:1670530-1670549 Msa0828750:CDS 55.0%
AGAGGAAGAGGAGGAGGAAG+AGG - chr5_4:1670277-1670296 Msa0828750:CDS 55.0%
GGAGGAAGAGGAGGAAGAAG+AGG - chr5_4:1670605-1670624 Msa0828750:CDS 55.0%
GGAGGAAGAAGAGGAAGAGG+AGG - chr5_4:1670839-1670858 Msa0828750:CDS 55.0%
GGAAGAAGAGGAAGAGGAGG+AGG - chr5_4:1671560-1671579 Msa0828750:CDS 55.0%
AGAGGAAGAGGAGGAGGAAG+AGG - chr5_4:1670277-1670296 Msa0828750:CDS 55.0%
AGAGGAAGAGGAGGAGGAAG+AGG - chr5_4:1670277-1670296 Msa0828750:CDS 55.0%
AGAGGAGGAGGAAGAGGAAG+AGG - chr5_4:1670950-1670969 Msa0828750:CDS 55.0%
GGAGGAAGAGGAAGAGGAAG+AGG - chr5_4:1670533-1670552 Msa0828750:CDS 55.0%
AGAGGAGGAGGAAGAAGAGG+AGG - chr5_4:1671791-1671810 Msa0828750:CDS 55.0%
GGAAGAAGAGGAGGAGGAAG+AGG - chr5_4:1670944-1670963 Msa0828750:CDS 55.0%
AGAAGAGGAGGAGGAAGAGG+AGG - chr5_4:1670947-1670966 Msa0828750:CDS 55.0%
GGAGGAAGAGGAAGAGGAAG+AGG - chr5_4:1670533-1670552 Msa0828750:CDS 55.0%
AAAGTGAGGCGGCTTCGACT+TGG - chr5_4:1674375-1674394 Msa0828750:intron 55.0%
AAGTGAGGCGGCTTCGACTT+GGG - chr5_4:1674376-1674395 Msa0828750:intron 55.0%
GCGAGATGTAGGGCTGCTTA+TGG - chr5_4:1674519-1674538 Msa0828750:intron 55.0%
CATGACAGAACAGCAGCCAC+TGG - chr5_4:1674736-1674755 Msa0828750:intron 55.0%
! GCAGGCTGGTTGTTGCTGTT+CGG - chr5_4:1674779-1674798 Msa0828750:intron 55.0%
! CAGGCTGGTTGTTGCTGTTC+GGG - chr5_4:1674780-1674799 Msa0828750:intron 55.0%
!!! TTCCTTGGGCGGTTTTGGGT+TGG - chr5_4:1674834-1674853 Msa0828750:intron 55.0%
GGAGGAAGAGGAGGAAGAGG+AGG - chr5_4:1670584-1670603 Msa0828750:CDS 60.0%
GGAAGAGGAGGAAGAGGAGG+AGG - chr5_4:1670587-1670606 Msa0828750:CDS 60.0%
GGAGGAAGAGGAGGAGGAAG+AGG - chr5_4:1670593-1670612 Msa0828750:CDS 60.0%
GGAAGAGGAGGAGGAAGAGG+AGG - chr5_4:1670280-1670299 Msa0828750:CDS 60.0%
GGAGGAAGAGGAAGAGGAGG+AGG - chr5_4:1670788-1670807 Msa0828750:CDS 60.0%
GGAAGAGGAGGAGGAAGAGG+AGG - chr5_4:1670280-1670299 Msa0828750:CDS 60.0%
AGAGGAGGAGGAAGAGGAGG+AGG - chr5_4:1670599-1670618 Msa0828750:CDS 60.0%
GGAGGAAGAGGAGGAGGAAG+AGG - chr5_4:1670593-1670612 Msa0828750:CDS 60.0%
GGAAGAGGAGGAGGAAGAGG+AGG - chr5_4:1670280-1670299 Msa0828750:CDS 60.0%
GGAAGAGGAGGAGGAAGAGG+AGG - chr5_4:1670280-1670299 Msa0828750:CDS 60.0%
GGAGGAGGAAGAGGAAGAGG+AGG - chr5_4:1670953-1670972 Msa0828750:CDS 60.0%
GGAGGAAGAGGAAGAGGAGG+AGG - chr5_4:1670788-1670807 Msa0828750:CDS 60.0%
GGAAGAGGAGGAGGAAGAGG+AGG - chr5_4:1670280-1670299 Msa0828750:CDS 60.0%
GGAGGAGGAAGAGGAAGAGG+AGG - chr5_4:1670953-1670972 Msa0828750:CDS 60.0%
GGAGGAAGAGGAAGAGGAGG+AGG - chr5_4:1670788-1670807 Msa0828750:CDS 60.0%
GGAAGAGGAAGAGGAGGAGG+AGG - chr5_4:1670791-1670810 Msa0828750:CDS 60.0%
AGAGGAAGAGGAGGAGGAGG+AGG - chr5_4:1671004-1671023 Msa0828750:CDS 60.0%
AGAGGAGGAGGAGGAGGAAG+AGG - chr5_4:1671010-1671029 Msa0828750:CDS 60.0%
GGAGGAAGAGGAGGAGGAAG+AGG - chr5_4:1670593-1670612 Msa0828750:CDS 60.0%
GGAGGAGGAAGAGGAAGAGG+AGG - chr5_4:1670953-1670972 Msa0828750:CDS 60.0%
GGAGGAAGAGGAAGAGGAGG+AGG - chr5_4:1670788-1670807 Msa0828750:CDS 60.0%
GGAAGAGGAAGAGGAGGAGG+AGG - chr5_4:1670791-1670810 Msa0828750:CDS 60.0%
AGAGGAAGAGGAGGAGGAGG+AGG - chr5_4:1671004-1671023 Msa0828750:CDS 60.0%
AGAGGAGGAGGAGGAGGAAG+AGG - chr5_4:1671010-1671029 Msa0828750:CDS 60.0%
AGAGGAGGAGGAGGAGGAAG+AGG - chr5_4:1671010-1671029 Msa0828750:CDS 60.0%
GGAGGAGGAGGAAGAGGAAG+AGG - chr5_4:1671091-1671110 Msa0828750:CDS 60.0%
GGAGGAGGAAGAGGAAGAGG+AGG - chr5_4:1670953-1670972 Msa0828750:CDS 60.0%
GGAGGAAGAGGAAGAGGAGG+AGG - chr5_4:1670788-1670807 Msa0828750:CDS 60.0%
AGAGGAGGAGGAAGAGGAGG+AGG - chr5_4:1670599-1670618 Msa0828750:CDS 60.0%
GGAGGAAGAGGAGGAGGAAG+AGG - chr5_4:1670593-1670612 Msa0828750:CDS 60.0%
GGAAGAGGAGGAGGAAGAGG+AGG - chr5_4:1670280-1670299 Msa0828750:CDS 60.0%
AGAGGAGGAGGAAGAGGAGG+AGG - chr5_4:1670599-1670618 Msa0828750:CDS 60.0%
GGAGGAAGAGGAGGAGGAAG+AGG - chr5_4:1670593-1670612 Msa0828750:CDS 60.0%
GGAAGAGGAGGAGGAAGAGG+AGG - chr5_4:1670280-1670299 Msa0828750:CDS 60.0%
AGAGGAGGAGGAAGAGGAGG+AGG - chr5_4:1670599-1670618 Msa0828750:CDS 60.0%
CGAGGAAGAGGAGGAGGAAG+AGG - chr5_4:1671377-1671396 Msa0828750:CDS 60.0%
GGAGGAAGAGGAAGAGGAGG+AGG - chr5_4:1670788-1670807 Msa0828750:CDS 60.0%
GGAAGAGGAGGAGGAAGAGG+AGG - chr5_4:1670280-1670299 Msa0828750:CDS 60.0%
AGAGGAGGAGGAAGAGGAGG+AGG - chr5_4:1670599-1670618 Msa0828750:CDS 60.0%
GGAGGAAGAGGAGGAGGAAG+AGG - chr5_4:1670593-1670612 Msa0828750:CDS 60.0%
GGAAGAGGAGGAGGAAGAGG+AGG - chr5_4:1670280-1670299 Msa0828750:CDS 60.0%
GGAAGAGGAGGAGGAAGAGG+AGG - chr5_4:1670280-1670299 Msa0828750:CDS 60.0%
AGAGGAGGAGGAAGAGGAGG+AGG - chr5_4:1670599-1670618 Msa0828750:CDS 60.0%
GGAGGAAGAGGAGGAGGAAG+AGG - chr5_4:1670593-1670612 Msa0828750:CDS 60.0%
GGAAGAGGAGGAGGAAGAGG+AGG - chr5_4:1670280-1670299 Msa0828750:CDS 60.0%
AGAGGAGGAGGAAGAGGAGG+AGG - chr5_4:1670599-1670618 Msa0828750:CDS 60.0%
GGAGGAAGAGGAGGAGGAAG+AGG - chr5_4:1670593-1670612 Msa0828750:CDS 60.0%
GGAAGAGGAGGAGGAAGAGG+AGG - chr5_4:1670280-1670299 Msa0828750:CDS 60.0%
AGAGGAGGAGGAAGAGGAGG+AGG - chr5_4:1670599-1670618 Msa0828750:CDS 60.0%
AGAGGAGGAGGAGGAGGAAG+AGG - chr5_4:1671010-1671029 Msa0828750:CDS 60.0%
AGAGGAGGAGGAGGAGGAAG+AGG - chr5_4:1671010-1671029 Msa0828750:CDS 60.0%
AGAGGAGGAGGAGGAGGAAG+AGG - chr5_4:1671010-1671029 Msa0828750:CDS 60.0%
GGAGGAGGAGGAAGAGGAAG+AGG - chr5_4:1671091-1671110 Msa0828750:CDS 60.0%
GGAGGAGGAAGAGGAAGAGG+AGG - chr5_4:1670953-1670972 Msa0828750:CDS 60.0%
GGAGGAAGAGGAAGAGGAGG+AGG - chr5_4:1670788-1670807 Msa0828750:CDS 60.0%
GGAGGAGGAAGAAGAGGAGG+AGG - chr5_4:1671794-1671813 Msa0828750:CDS 60.0%
AGAGGAGGAGGAAGAGGAGG+AGG - chr5_4:1670599-1670618 Msa0828750:CDS 60.0%
GGAGGAGGAGGAAGAGGAAG+AGG - chr5_4:1671091-1671110 Msa0828750:CDS 60.0%
!! AGGCGGCTTCGACTTGGGAT+AGG - chr5_4:1674381-1674400 Msa0828750:intron 60.0%
!! ACGAGTGGAGTTGGTGTCCC+CGG - chr5_4:1674621-1674640 Msa0828750:intron 60.0%
!!! GTCCCCGGGAGTGTCTTTTG+AGG - chr5_4:1674636-1674655 Msa0828750:intron 60.0%
TGTGTGTTTCGGCTGTGGGG+TGG - chr5_4:1674687-1674706 Msa0828750:intron 60.0%
CAGGCAGAAAGCAGCACCAG+TGG + chr5_4:1674755-1674774 None:intergenic 60.0%
TGCCAACCCAAAACCGCCCA+AGG + chr5_4:1674839-1674858 None:intergenic 60.0%
GGAGGAGGAGGAGGAAGAGG+AGG - chr5_4:1671013-1671032 Msa0828750:CDS 65.0%
GGAGGAGGAGGAAGAGGAGG+AGG - chr5_4:1671016-1671035 Msa0828750:CDS 65.0%
GGAGGAGGAGGAGGAAGAGG+AGG - chr5_4:1671013-1671032 Msa0828750:CDS 65.0%
GGAGGAGGAGGAAGAGGAGG+AGG - chr5_4:1671016-1671035 Msa0828750:CDS 65.0%
GGAGGAGGAAGAGGAGGAGG+AGG - chr5_4:1670803-1670822 Msa0828750:CDS 65.0%
GGAGGAAGAGGAGGAGGAGG+AGG - chr5_4:1671058-1671077 Msa0828750:CDS 65.0%
GGAAGAGGAGGAGGAGGAGG+AGG - chr5_4:1671007-1671026 Msa0828750:CDS 65.0%
GGAGGAGGAGGAGGAGGAAG+AGG - chr5_4:1671067-1671086 Msa0828750:CDS 65.0%
GGAGGAGGAGGAGGAAGAGG+AGG - chr5_4:1671013-1671032 Msa0828750:CDS 65.0%
GGAGGAGGAGGAAGAGGAGG+AGG - chr5_4:1671016-1671035 Msa0828750:CDS 65.0%
GGAGGAGGAAGAGGAGGAGG+AGG - chr5_4:1670803-1670822 Msa0828750:CDS 65.0%
GGAGGAAGAGGAGGAGGAGG+AGG - chr5_4:1671058-1671077 Msa0828750:CDS 65.0%
GGAGGAGGAAGAGGAGGAGG+AGG - chr5_4:1670803-1670822 Msa0828750:CDS 65.0%
GGAGGAAGAGGAGGAGGAGG+AGG - chr5_4:1671058-1671077 Msa0828750:CDS 65.0%
GGAAGAGGAGGAGGAGGAGG+AGG - chr5_4:1671007-1671026 Msa0828750:CDS 65.0%
AGAGGAGGAGGAGGAGGAGG+AGG - chr5_4:1671064-1671083 Msa0828750:CDS 65.0%
GGAGGAGGAGGACGAGGAAG+AGG - chr5_4:1671365-1671384 Msa0828750:CDS 65.0%
GGAGGAGGACGAGGAAGAGG+AGG - chr5_4:1671368-1671387 Msa0828750:CDS 65.0%
GGAGGACGAGGAAGAGGAGG+AGG - chr5_4:1671371-1671390 Msa0828750:CDS 65.0%
GGAGGAGGAAGAGGAGGAGG+AGG - chr5_4:1670803-1670822 Msa0828750:CDS 65.0%
GGAGGAAGAGGAGGAGGAGG+AGG - chr5_4:1671058-1671077 Msa0828750:CDS 65.0%
GGAGGAGGAGGAGGAAGAGG+AGG - chr5_4:1671013-1671032 Msa0828750:CDS 65.0%
GGAGGAGGAGGAAGAGGAGG+AGG - chr5_4:1671016-1671035 Msa0828750:CDS 65.0%
GGAGGAGGAAGAGGAGGAGG+AGG - chr5_4:1670803-1670822 Msa0828750:CDS 65.0%
GGAGGAAGAGGAGGAGGAGG+AGG - chr5_4:1671058-1671077 Msa0828750:CDS 65.0%
GGAGGAGGAGGAGGAAGAGG+AGG - chr5_4:1671013-1671032 Msa0828750:CDS 65.0%
GGAGGAGGAGGAAGAGGAGG+AGG - chr5_4:1671016-1671035 Msa0828750:CDS 65.0%
GGAGGAGGAAGAGGAGGAGG+AGG - chr5_4:1670803-1670822 Msa0828750:CDS 65.0%
GGAGGAAGAGGAGGAGGAGG+AGG - chr5_4:1671058-1671077 Msa0828750:CDS 65.0%
GGAGGAGGAAGAGGAGGAGG+AGG - chr5_4:1670803-1670822 Msa0828750:CDS 65.0%
GGAGGAAGAGGAGGAGGAGG+AGG - chr5_4:1671058-1671077 Msa0828750:CDS 65.0%
GGAAGAGGAGGAGGAGGAGG+AGG - chr5_4:1671007-1671026 Msa0828750:CDS 65.0%
AGAGGAGGAGGAGGAGGAGG+AGG - chr5_4:1671064-1671083 Msa0828750:CDS 65.0%
GGAGGAGGAGGAGGAGGAAG+AGG - chr5_4:1671067-1671086 Msa0828750:CDS 65.0%
!! CGAGTGGAGTTGGTGTCCCC+GGG - chr5_4:1674622-1674641 Msa0828750:intron 65.0%
CTGCTTTCTGCCTGCTGCGC+AGG - chr5_4:1674761-1674780 Msa0828750:intron 65.0%
TTTCTGCCTGCTGCGCAGGC+TGG - chr5_4:1674765-1674784 Msa0828750:intron 65.0%
CAACAACCAGCCTGCGCAGC+AGG + chr5_4:1674774-1674793 None:intergenic 65.0%
GGAGGAGGAGGAGGAGGAGG+AGG - chr5_4:1671332-1671351 Msa0828750:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG - chr5_4:1671332-1671351 Msa0828750:CDS 70.0%
GGAGGAGGAGGAGGAGGACG+AGG - chr5_4:1671341-1671360 Msa0828750:CDS 70.0%
GGAGGAGGAGGAGGACGAGG+AGG - chr5_4:1671344-1671363 Msa0828750:CDS 70.0%
GGAGGAGGAGGACGAGGAGG+AGG - chr5_4:1671347-1671366 Msa0828750:CDS 70.0%
GGAGGAGGACGAGGAGGAGG+AGG - chr5_4:1671350-1671369 Msa0828750:CDS 70.0%
GGAGGACGAGGAGGAGGAGG+AGG - chr5_4:1671353-1671372 Msa0828750:CDS 70.0%
CGAGGAGGAGGAGGAGGACG+AGG - chr5_4:1671359-1671378 Msa0828750:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG - chr5_4:1671332-1671351 Msa0828750:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG - chr5_4:1671332-1671351 Msa0828750:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG - chr5_4:1671332-1671351 Msa0828750:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG - chr5_4:1671332-1671351 Msa0828750:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG - chr5_4:1671332-1671351 Msa0828750:CDS 70.0%
GGAGGAGGAGGAGGAGGACG+AGG - chr5_4:1671341-1671360 Msa0828750:CDS 70.0%
GGAGGAGGAGGAGGACGAGG+AGG - chr5_4:1671344-1671363 Msa0828750:CDS 70.0%
GGAGGAGGAGGACGAGGAGG+AGG - chr5_4:1671347-1671366 Msa0828750:CDS 70.0%
GGAGGAGGACGAGGAGGAGG+AGG - chr5_4:1671350-1671369 Msa0828750:CDS 70.0%
GGAGGACGAGGAGGAGGAGG+AGG - chr5_4:1671353-1671372 Msa0828750:CDS 70.0%
GGACGAGGAGGAGGAGGAGG+AGG - chr5_4:1671356-1671375 Msa0828750:CDS 70.0%
CGAGGAGGAGGAGGAGGAGG+AGG - chr5_4:1671857-1671876 Msa0828750:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 1669680 1674861 1669680 ID=Msa0828750;Name=Msa0828750
chr5_4 mRNA 1669680 1674861 1669680 ID=Msa0828750-mRNA-1;Parent=Msa0828750;Name=Msa0828750-mRNA-1;_AED=0.49;_eAED=0.49;_QI=0|0|0|0.4|1|1|5|0|1492
chr5_4 exon 1674859 1674861 1674859 ID=Msa0828750-mRNA-1:exon:428;Parent=Msa0828750-mRNA-1
chr5_4 exon 1674242 1674388 1674242 ID=Msa0828750-mRNA-1:exon:427;Parent=Msa0828750-mRNA-1
chr5_4 exon 1670110 1674192 1670110 ID=Msa0828750-mRNA-1:exon:426;Parent=Msa0828750-mRNA-1
chr5_4 exon 1669884 1670011 1669884 ID=Msa0828750-mRNA-1:exon:425;Parent=Msa0828750-mRNA-1
chr5_4 exon 1669680 1669797 1669680 ID=Msa0828750-mRNA-1:exon:424;Parent=Msa0828750-mRNA-1
chr5_4 CDS 1674859 1674861 1674859 ID=Msa0828750-mRNA-1:cds;Parent=Msa0828750-mRNA-1
chr5_4 CDS 1674242 1674388 1674242 ID=Msa0828750-mRNA-1:cds;Parent=Msa0828750-mRNA-1
chr5_4 CDS 1670110 1674192 1670110 ID=Msa0828750-mRNA-1:cds;Parent=Msa0828750-mRNA-1
chr5_4 CDS 1669884 1670011 1669884 ID=Msa0828750-mRNA-1:cds;Parent=Msa0828750-mRNA-1
chr5_4 CDS 1669680 1669797 1669680 ID=Msa0828750-mRNA-1:cds;Parent=Msa0828750-mRNA-1
Gene Sequence

>Msa0828750

ATGTGGAGAAAAGATCTACATCTTGTGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAGGAGGAAGAGGAAGAAGAAGAGGAAGAAGAGGAAGAAGAGGAAGAGGAAGAAGAAGAAGAGGAAGAAGAGGAGGAAGAAGAGGAAGAAGAGGAAGAAGAGGAAGAAGAAGAGGAAGAAGAGGAAGAAGAGGAAGAAGAAGAAGAAGAAGAGGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAGGAGGAAGAAGAGGAGGAAGAGGAAGAGGAAGAAGAAGAGGAGGAAGAAGAGGAGGAAGAAGAGGAGGAAGAGGAGGAAGAGGAGGAGGAAGAGGAGGAAGAAGAGGAGGAAGAAGAGGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAGGAAGAAGAAGAGGAAGAAGAAGAGGAGGAAGAAGAGGAGGAAGAAGAGGAGGAAGAGGAAGAGGAGGAGGAAGAGGAGGAGGAAGAGGAGGAAGAAGAGGAGGAAGAAGAGGAAGAGGAAGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAGGAGGAGGAAGAGGAGGAAGAAGAGGAGGAGGAAGAGGAAGAGGAGGAGGAAGAGGAGGAAGAAGAGGAGGAGGAAGAGGAAGAGGAGGAGGAGGAGGAAGAGGAGGAGGAAGAGGAAGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAAGAGGAGGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAGGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAAGAGGAGGAAGAAGAGGAGGAGGAAGAGGAGGAGGAAGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGACGAGGAGGAGGAGGAGGACGAGGAAGAGGAGGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAGGAAGAAGAGGAAGAAGAAGAGGAAGAAGAAGAGGAGGAAGAAGAGGAGGAAGAAGAGGAGGAAGAGGAAGAGGAGGAGGAAGAGGAGGAGGAAGAGGAGGAAGAAGAGGAAGAGGAGGAGGAAGAGGAGGAGGAAGAGGAGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAAGAGGAGGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGAGGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAAGAAGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGACGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAGGAAGAGGAGAAGAAGAAGAAGAGGAGAAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAGAAGAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGAAGAAGAAGAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGGTGAAAATTGTGAGGATAATTTAGCAGAAAATGAAGATGATGAACCTAAGGTTGGCATGAAATTTAATTCTGCAGAAGAAGTTGACGAAGAAGTTGACAAATATTACAAGAATTATGCTAGATGTATAGGTTTTGGAGTTAGCAAAATCAGTACAAAAAATGGAGATGATGAAAAAAAGTATTTTACTCTAGGGTGTAGCCGTGCAAGAAGCTATGTGAGTAATTCCAAAAATCTTTTAAAGCCAAATCCTAGCATGAAAACACATTGTAAGGCTAGAGTAAATGTATGTGTGTCTTCAGATGGAACAATTACTATTTCTAAGGTTGCTCTTGGACATAATCATGACTTAATAAGTCCAAGCAAATCAAGATATTTTAAATGCAACAAGAATATAGACCCTAGTATAAAAAGGAGATTGGAGGTTAATGACCAAGCTTGGATTAATGTAAGTAGGAATTTTTGGTCTATGGTTGTTGAAGCAAGTGGATATGATAACCTTACATTCGGGAAAAAAGATGTTAGAAACTACATAGACAAAGTGAGGCGGCTTCGACTTGGGATAGGAGACGCTGAAGCCATTCAAAATTATTTTGGCTGCTTATGGGATGAGTTAGTGGAGAAGGTTAAAGTGTTGACTTGGAGGTGGTTGTTCGGAAGATCCAATACTCCGGCATGTATGTTTTACGAGTGGAGTTGGTGTCCCCGGGAGTGTCTTTTGAGAACAGCAGCCACTGGTGCTGCTTTCTGCCTGCTGCGCAGGCTGGTTGTTGCTGTTCGGGCCTCTGTTGTTACTGTTTGTTTTGGGACATTTTCCTTGGGCGGTTTTGGGTTGGCATAG

Protein sequence

>Msa0828750

MWRKDLHLVKKKKKKKRKKRKKKKKKKKKKKKKKKKKKKKKKKRKRRRKRKKKRKKRKKRKRKKKKRKKRRKKRKKRKKRKKKRKKRKKRKKKKKKRKKRKKKKKKKRRKKRRKRKRKKKRRKKRRKKRRKRRKRRRKRRKKRRKKRKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKRKKRKKKRKKKRRKKRRKKRRKRKRRRKRRRKRRKKRRKKRKRKRRRKKKKKKKKKKKKKKKRKRKRRRKRRKKRRRKRKRRRKRRKKRRRKRKRRRRRKRRRKRKRRRRRKRRRRRRKRRRRRKRKRRRKRKRKRKKKKRKKKRKKKKKKKKKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEKRKRKRKRKKKRKRRRRRRGEGRRRRRRRRRRRRRRRRRRRRRRRKRRRRRRRRRRRRRRRREEEEEEKKKKKKKKKKKKKKKEEEEEEEEEEEEEEEEEKKKKKKKKKKKKKKRRRRRRRREEEEEEEEEEEEEEEEEERRRRRRRRRRRRRRRRRRRRRRRRRRRRRRREEEEEEEEEKKKKKKKKKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKEKKKKKKKRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKEEEEEKKKKKKKKKKKKKKKKKEEEEEEEEEEEEEEEKKKKKKKKKKKKKKRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRREEEEEEEEEEEEEEEEERRRRRRRRRRRRRRRKEEEEEEEEEEEEEEEEEEEEEEERRRRRRRRRRRRRRRRRRRRRRRREEEEEEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKEEEEEEEEEEEEEEEEEERRRRRRRRRRRRRRRRRRRRRRRRRRRRRRREEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGENCEDNLAENEDDEPKVGMKFNSAEEVDEEVDKYYKNYARCIGFGVSKISTKNGDDEKKYFTLGCSRARSYVSNSKNLLKPNPSMKTHCKARVNVCVSSDGTITISKVALGHNHDLISPSKSRYFKCNKNIDPSIKRRLEVNDQAWINVSRNFWSMVVEASGYDNLTFGKKDVRNYIDKVRRLRLGIGDAEAIQNYFGCLWDELVEKVKVLTWRWLFGRSNTPACMFYEWSWCPRECLLRTAATGAAFCLLRRLVVAVRASVVTVCFGTFSLGGFGLA*