Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0666920 | XP_024638685.2 | 96.405 | 306 | 9 | 1 | 1 | 306 | 1 | 304 | 0.0 | 583 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0666920 | A0A396I1V9 | 96.405 | 306 | 9 | 1 | 1 | 306 | 1 | 304 | 0.0 | 583 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0629120 | Msa0666920 | 0.972492 | 7.443540e-135 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0666920 | MtrunA17_Chr4g0005301 | 96.405 | 306 | 9 | 1 | 1 | 306 | 1 | 304 | 0.0 | 583 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0666920 | AT3G08780.1 | 45.016 | 311 | 142 | 7 | 7 | 306 | 6 | 298 | 3.65e-80 | 246 |
| Msa0666920 | AT3G08780.2 | 45.161 | 310 | 141 | 7 | 7 | 305 | 6 | 297 | 1.15e-79 | 244 |
Find 125 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCCCTAATTCTCCGTTTC+CGG | 0.203519 | 4_4:+7049963 | Msa0666920:CDS |
| AGCACCGGAAACGGAGAATT+AGG | 0.227019 | 4_4:-7049967 | None:intergenic |
| GAGGGATTTGAATTGGGATT+AGG | 0.252506 | 4_4:-7049724 | None:intergenic |
| GGCTCCATGGCGGCGGAAAA+TGG | 0.270075 | 4_4:-7049319 | None:intergenic |
| GGTTGATGGTGGAGGAGAAT+TGG | 0.275733 | 4_4:-7049702 | None:intergenic |
| AGGGATTTGAATTGGGATTA+GGG | 0.281463 | 4_4:-7049723 | None:intergenic |
| GTTCAATATCATTAGGATTA+GGG | 0.284271 | 4_4:+7050319 | Msa0666920:intron |
| TGACGGTGGCGAGGAGGGTG+GGG | 0.290935 | 4_4:-7049501 | None:intergenic |
| AAGTTATTCACCGATGATTC+AGG | 0.291186 | 4_4:+7050002 | Msa0666920:CDS |
| TGATGAAGAGGGATTTGAAT+TGG | 0.309752 | 4_4:-7049731 | None:intergenic |
| TGAATTGGGATTAGGGTTGA+TGG | 0.311785 | 4_4:-7049716 | None:intergenic |
| TGGTTGAGAGGTGGTGGAGG+AGG | 0.331963 | 4_4:-7049390 | None:intergenic |
| TTGAAACCGGGTTGAATGAT+TGG | 0.339552 | 4_4:-7049891 | None:intergenic |
| GTTGATGGTGGAGGAGAATT+GGG | 0.347491 | 4_4:-7049701 | None:intergenic |
| GGTGGTGGAGGAGGGAGGAG+AGG | 0.349199 | 4_4:-7049381 | None:intergenic |
| CAAACTCTGAGTATAATTCT+TGG | 0.351406 | 4_4:-7050142 | None:intergenic |
| TCCCTCCTTGGTTGGTTCTC+CGG | 0.356492 | 4_4:+7049610 | Msa0666920:CDS |
| TTAATAATTTCGATTGAAAC+CGG | 0.362748 | 4_4:-7049904 | None:intergenic |
| CCTCATTCCTCCTCCCTCCT+TGG | 0.365897 | 4_4:+7049598 | Msa0666920:CDS |
| TTCTAAGGATCAAAGGGAAT+TGG | 0.368237 | 4_4:+7050062 | Msa0666920:CDS |
| CAAGAATTATACTCAGAGTT+TGG | 0.369134 | 4_4:+7050143 | Msa0666920:CDS |
| TAAGAGGTTGAGTAATTTGA+TGG | 0.370361 | 4_4:+7050110 | Msa0666920:CDS |
| TTCAGCTAAGGTTCTTGAAC+AGG | 0.375440 | 4_4:+7050227 | Msa0666920:CDS |
| GATGAAGAGGGATTTGAATT+GGG | 0.377075 | 4_4:-7049730 | None:intergenic |
| GGAGGAGGGAGGAGAGGGTT+GGG | 0.378427 | 4_4:-7049375 | None:intergenic |
| GGTGACGGTGGCGAGGAGGG+TGG | 0.386005 | 4_4:-7049503 | None:intergenic |
| TAAGATGAAACAGACTTCTA+AGG | 0.389891 | 4_4:+7050047 | Msa0666920:CDS |
| AGGTGGTTGAGAGGTGGTGG+AGG | 0.397582 | 4_4:-7049393 | None:intergenic |
| GGGTGGTGGCTCCATGGCGG+CGG | 0.398544 | 4_4:-7049326 | None:intergenic |
| TGGAGGTGGTTGAGAGGTGG+TGG | 0.402522 | 4_4:-7049396 | None:intergenic |
| ACATTCTCCGGCCTCCTCTT+CGG | 0.403736 | 4_4:+7049424 | Msa0666920:CDS |
| GTGACGGTGGCGAGGAGGGT+GGG | 0.404733 | 4_4:-7049502 | None:intergenic |
| GATTGAGAATTTGACTACTT+TGG | 0.405183 | 4_4:+7050194 | Msa0666920:CDS |
| GAGGGGAGAACGGCGGCGAC+CGG | 0.413709 | 4_4:-7049629 | None:intergenic |
| GGTTGAGAGGTGGTGGAGGA+GGG | 0.415031 | 4_4:-7049389 | None:intergenic |
| GACGGTGGCGAGGAGGGTGG+GGG | 0.416853 | 4_4:-7049500 | None:intergenic |
| GTGGTGGAGGAGGGAGGAGA+GGG | 0.430349 | 4_4:-7049380 | None:intergenic |
| GCCGGTGACGGTGGCGAGGA+GGG | 0.433101 | 4_4:-7049506 | None:intergenic |
| ATTCCTCCTCCCTCCTTGGT+TGG | 0.434522 | 4_4:+7049602 | Msa0666920:CDS |
| TGAAACCGGGTTGAATGATT+GGG | 0.436969 | 4_4:-7049890 | None:intergenic |
| GCACCGGAAACGGAGAATTA+GGG | 0.437747 | 4_4:-7049966 | None:intergenic |
| GAGGGAGGAGAGGGTTGGGC+CGG | 0.442761 | 4_4:-7049371 | None:intergenic |
| AACATTGGACCGGCATTTCG+TGG | 0.443927 | 4_4:+7049925 | Msa0666920:CDS |
| TGGAGGAGGGAGGAGAGGGT+TGG | 0.447135 | 4_4:-7049376 | None:intergenic |
| GATAAGAGAAAGAATAAACT+AGG | 0.460094 | 4_4:-7049796 | None:intergenic |
| CCGGCATTTCGTGGACATTA+CGG | 0.460139 | 4_4:+7049934 | Msa0666920:CDS |
| GGAGGAGAATTGGGAGAGAG+AGG | 0.460193 | 4_4:-7049692 | None:intergenic |
| TGAGAGGTGGTGGAGGAGGG+AGG | 0.461649 | 4_4:-7049386 | None:intergenic |
| GGGAAGGACGGAGGGGAGAA+CGG | 0.463104 | 4_4:-7049639 | None:intergenic |
| GGGATTAGGGTTGATGGTGG+AGG | 0.470945 | 4_4:-7049710 | None:intergenic |
| TGAGGTTGAGTGGGGTTGTG+AGG | 0.472152 | 4_4:-7049456 | None:intergenic |
| GGCGTTGATATCGCCGGAGG+GGG | 0.476101 | 4_4:-7049554 | None:intergenic |
| CTGAAGGATATGAGGTTAAG+AGG | 0.476899 | 4_4:+7050094 | Msa0666920:CDS |
| ACCCTCCTCGCCACCGTCAC+CGG | 0.477489 | 4_4:+7049505 | Msa0666920:CDS |
| AAGGACGGAGGGGAGAACGG+CGG | 0.482547 | 4_4:-7049636 | None:intergenic |
| GAATCGTCGGTGAGGTTGAG+TGG | 0.484785 | 4_4:-7049466 | None:intergenic |
| CGAAATTATTAACATTGGAC+CGG | 0.486993 | 4_4:+7049915 | Msa0666920:CDS |
| TGACAATCAAGCACCGGAAA+CGG | 0.487508 | 4_4:-7049976 | None:intergenic |
| AGAAGGTGAAGATGATGAAG+AGG | 0.491499 | 4_4:-7049743 | None:intergenic |
| TCAATCGAAATTATTAACAT+TGG | 0.494503 | 4_4:+7049910 | Msa0666920:CDS |
| GGAGAGGGTTGGGCCGGAGA+TGG | 0.496307 | 4_4:-7049365 | None:intergenic |
| ACAGACTTCTAAGGATCAAA+GGG | 0.497223 | 4_4:+7050056 | Msa0666920:CDS |
| GATGAGACGACGGAGGGTGG+TGG | 0.504672 | 4_4:-7049575 | None:intergenic |
| GAGGTTGAGTGGGGTTGTGA+GGG | 0.505771 | 4_4:-7049455 | None:intergenic |
| CAAGGAGGGAGGAGGAATGA+GGG | 0.506473 | 4_4:-7049597 | None:intergenic |
| GAGGCCGGAGAATGTGGAAG+TGG | 0.508769 | 4_4:-7049416 | None:intergenic |
| CCAAGGAGGGAGGAGGAATG+AGG | 0.510220 | 4_4:-7049598 | None:intergenic |
| TTCACGGAGGGAAGGACGGA+GGG | 0.514207 | 4_4:-7049647 | None:intergenic |
| GGAGAATGTGGAAGTGGAGG+TGG | 0.514993 | 4_4:-7049410 | None:intergenic |
| ATGAGGTGATTGAGAATTCA+CGG | 0.515113 | 4_4:-7049663 | None:intergenic |
| AAGTGGAGGTGGTTGAGAGG+TGG | 0.515608 | 4_4:-7049399 | None:intergenic |
| AATCGTCGGTGAGGTTGAGT+GGG | 0.518126 | 4_4:-7049465 | None:intergenic |
| ACCTCCACTTCCACATTCTC+CGG | 0.519836 | 4_4:+7049412 | Msa0666920:CDS |
| GAACCAACCAAGGAGGGAGG+AGG | 0.521865 | 4_4:-7049605 | None:intergenic |
| GAAGGTGAAGATGATGAAGA+GGG | 0.522910 | 4_4:-7049742 | None:intergenic |
| AACAGACTTCTAAGGATCAA+AGG | 0.525556 | 4_4:+7050055 | Msa0666920:CDS |
| TGTTTGTGCTGAAGGATATG+AGG | 0.526001 | 4_4:+7050086 | Msa0666920:CDS |
| AGAGAAAGGAGGAAGTGGTG+AGG | 0.527598 | 4_4:-7049531 | None:intergenic |
| ACCGGAGAACCAACCAAGGA+GGG | 0.529014 | 4_4:-7049611 | None:intergenic |
| GAAGAGGAGGCCGGAGAATG+TGG | 0.531295 | 4_4:-7049422 | None:intergenic |
| ATTGGGATTAGGGTTGATGG+TGG | 0.533376 | 4_4:-7049713 | None:intergenic |
| GGTGGTGTCGGAGGAATCGT+CGG | 0.540121 | 4_4:-7049479 | None:intergenic |
| GAGTAATTTGATGGGTTCTG+AGG | 0.546646 | 4_4:+7050119 | Msa0666920:CDS |
| GGTTGAACAGAGTTCAGCTA+AGG | 0.548443 | 4_4:+7050215 | Msa0666920:CDS |
| GGAGGAAGTGGTGAGGAAGC+CGG | 0.549037 | 4_4:-7049524 | None:intergenic |
| CCGTAATGTCCACGAAATGC+CGG | 0.551028 | 4_4:-7049934 | None:intergenic |
| AGGGATGAGACGACGGAGGG+TGG | 0.555698 | 4_4:-7049578 | None:intergenic |
| CGATTTGAAATTGATAAACA+CGG | 0.556504 | 4_4:-7049864 | None:intergenic |
| GTGGCGTTGATATCGCCGGA+GGG | 0.559198 | 4_4:-7049556 | None:intergenic |
| GGGTGACGTGGCCGAAGAGG+AGG | 0.560284 | 4_4:-7049435 | None:intergenic |
| ATAAGAGAAAGAATAAACTA+GGG | 0.562165 | 4_4:-7049795 | None:intergenic |
| TAATAATTTCGATTGAAACC+GGG | 0.565915 | 4_4:-7049903 | None:intergenic |
| AGCCGGTGACGGTGGCGAGG+AGG | 0.566651 | 4_4:-7049507 | None:intergenic |
| GGTGGCGTTGATATCGCCGG+AGG | 0.568236 | 4_4:-7049557 | None:intergenic |
| AGTGGTGAGGAAGCCGGTGA+CGG | 0.572667 | 4_4:-7049518 | None:intergenic |
| GCCGGAGAATGTGGAAGTGG+AGG | 0.575664 | 4_4:-7049413 | None:intergenic |
| TTATCGTCGTCCTGAATCAT+CGG | 0.576845 | 4_4:-7050012 | None:intergenic |
| ATGAGGGATGAGACGACGGA+GGG | 0.577403 | 4_4:-7049581 | None:intergenic |
| AGAATTCACGGAGGGAAGGA+CGG | 0.578218 | 4_4:-7049651 | None:intergenic |
| AAGAGGTTGAGTAATTTGAT+GGG | 0.579839 | 4_4:+7050111 | Msa0666920:CDS |
| CGAATCCCAATCATTCAACC+CGG | 0.582113 | 4_4:+7049885 | Msa0666920:CDS |
| GACGTGGCCGAAGAGGAGGC+CGG | 0.582804 | 4_4:-7049431 | None:intergenic |
| GAATTATACTCAGAGTTTGG+AGG | 0.584124 | 4_4:+7050146 | Msa0666920:CDS |
| GAATTGGATGTTTGTGCTGA+AGG | 0.584667 | 4_4:+7050078 | Msa0666920:CDS |
| GGAGAGAGAGGAGAGAGATG+AGG | 0.585087 | 4_4:-7049680 | None:intergenic |
| GGAAGCCGGTGACGGTGGCG+AGG | 0.593369 | 4_4:-7049510 | None:intergenic |
| ATTGAGAATTCACGGAGGGA+AGG | 0.593655 | 4_4:-7049655 | None:intergenic |
| TGAGGGTGACGTGGCCGAAG+AGG | 0.593756 | 4_4:-7049438 | None:intergenic |
| TCACGGAGGGAAGGACGGAG+GGG | 0.594954 | 4_4:-7049646 | None:intergenic |
| CTTAACTGACAATCAAGCAC+CGG | 0.595833 | 4_4:-7049982 | None:intergenic |
| TGGAAGTGGAGGTGGTTGAG+AGG | 0.600806 | 4_4:-7049402 | None:intergenic |
| GGTGAGGAAGCCGGTGACGG+TGG | 0.603918 | 4_4:-7049515 | None:intergenic |
| ATTCACGGAGGGAAGGACGG+AGG | 0.609111 | 4_4:-7049648 | None:intergenic |
| GTGGGGTTGTGAGGGTGACG+TGG | 0.615643 | 4_4:-7049447 | None:intergenic |
| GACCGGAGAACCAACCAAGG+AGG | 0.617300 | 4_4:-7049612 | None:intergenic |
| GGAGAACCAACCAAGGAGGG+AGG | 0.620479 | 4_4:-7049608 | None:intergenic |
| GGTGGTGGCGTTGATATCGC+CGG | 0.624177 | 4_4:-7049560 | None:intergenic |
| AGGAATGAGGGATGAGACGA+CGG | 0.635189 | 4_4:-7049585 | None:intergenic |
| TGGCGTTGATATCGCCGGAG+GGG | 0.635277 | 4_4:-7049555 | None:intergenic |
| GGCGACCGGAGAACCAACCA+AGG | 0.636303 | 4_4:-7049615 | None:intergenic |
| ATCGTCGGTGAGGTTGAGTG+GGG | 0.665011 | 4_4:-7049464 | None:intergenic |
| TGTCGGAGGAATCGTCGGTG+AGG | 0.668295 | 4_4:-7049474 | None:intergenic |
| GGTGATTGAGAATTCACGGA+GGG | 0.669306 | 4_4:-7049659 | None:intergenic |
| AATGAGGGATGAGACGACGG+AGG | 0.680231 | 4_4:-7049582 | None:intergenic |
| AGGTGATTGAGAATTCACGG+AGG | 0.780130 | 4_4:-7049660 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAGAGAAAGAATAAACTA+GGG | - | chr4_4:7049798-7049817 | None:intergenic | 20.0% |
| !! | TTAATAATTTCGATTGAAAC+CGG | - | chr4_4:7049907-7049926 | None:intergenic | 20.0% |
| !! | TCAATCGAAATTATTAACAT+TGG | + | chr4_4:7049910-7049929 | Msa0666920:CDS | 20.0% |
| !! | ATATGTAGTTCAATATCATT+AGG | + | chr4_4:7050312-7050331 | Msa0666920:intron | 20.0% |
| !! | ATAAGAGAAAGAATAAACTA+GGG | - | chr4_4:7049798-7049817 | None:intergenic | 20.0% |
| !! | TTAATAATTTCGATTGAAAC+CGG | - | chr4_4:7049907-7049926 | None:intergenic | 20.0% |
| !! | TCAATCGAAATTATTAACAT+TGG | + | chr4_4:7049910-7049929 | Msa0666920:CDS | 20.0% |
| !! | ATATGTAGTTCAATATCATT+AGG | + | chr4_4:7050312-7050331 | Msa0666920:intron | 20.0% |
| ! | GATAAGAGAAAGAATAAACT+AGG | - | chr4_4:7049799-7049818 | None:intergenic | 25.0% |
| !!! | TGTGAATTTTGATCAGAAAT+TGG | - | chr4_4:7049826-7049845 | None:intergenic | 25.0% |
| !! | CGATTTGAAATTGATAAACA+CGG | - | chr4_4:7049867-7049886 | None:intergenic | 25.0% |
| ! | TAATAATTTCGATTGAAACC+GGG | - | chr4_4:7049906-7049925 | None:intergenic | 25.0% |
| !!! | TAGTTTACTTTGTTTTTGTG+TGG | + | chr4_4:7050251-7050270 | Msa0666920:intron | 25.0% |
| ! | GATAAGAGAAAGAATAAACT+AGG | - | chr4_4:7049799-7049818 | None:intergenic | 25.0% |
| !!! | TGTGAATTTTGATCAGAAAT+TGG | - | chr4_4:7049826-7049845 | None:intergenic | 25.0% |
| !! | CGATTTGAAATTGATAAACA+CGG | - | chr4_4:7049867-7049886 | None:intergenic | 25.0% |
| ! | TAATAATTTCGATTGAAACC+GGG | - | chr4_4:7049906-7049925 | None:intergenic | 25.0% |
| !!! | TAGTTTACTTTGTTTTTGTG+TGG | + | chr4_4:7050251-7050270 | Msa0666920:intron | 25.0% |
| CGAAATTATTAACATTGGAC+CGG | + | chr4_4:7049915-7049934 | Msa0666920:CDS | 30.0% | |
| TAAGATGAAACAGACTTCTA+AGG | + | chr4_4:7050047-7050066 | Msa0666920:CDS | 30.0% | |
| TAAGAGGTTGAGTAATTTGA+TGG | + | chr4_4:7050110-7050129 | Msa0666920:CDS | 30.0% | |
| AAGAGGTTGAGTAATTTGAT+GGG | + | chr4_4:7050111-7050130 | Msa0666920:CDS | 30.0% | |
| CAAACTCTGAGTATAATTCT+TGG | - | chr4_4:7050145-7050164 | None:intergenic | 30.0% | |
| CAAGAATTATACTCAGAGTT+TGG | + | chr4_4:7050143-7050162 | Msa0666920:CDS | 30.0% | |
| GATTGAGAATTTGACTACTT+TGG | + | chr4_4:7050194-7050213 | Msa0666920:CDS | 30.0% | |
| CGAAATTATTAACATTGGAC+CGG | + | chr4_4:7049915-7049934 | Msa0666920:CDS | 30.0% | |
| TAAGATGAAACAGACTTCTA+AGG | + | chr4_4:7050047-7050066 | Msa0666920:CDS | 30.0% | |
| TAAGAGGTTGAGTAATTTGA+TGG | + | chr4_4:7050110-7050129 | Msa0666920:CDS | 30.0% | |
| AAGAGGTTGAGTAATTTGAT+GGG | + | chr4_4:7050111-7050130 | Msa0666920:CDS | 30.0% | |
| CAAACTCTGAGTATAATTCT+TGG | - | chr4_4:7050145-7050164 | None:intergenic | 30.0% | |
| CAAGAATTATACTCAGAGTT+TGG | + | chr4_4:7050143-7050162 | Msa0666920:CDS | 30.0% | |
| GATTGAGAATTTGACTACTT+TGG | + | chr4_4:7050194-7050213 | Msa0666920:CDS | 30.0% | |
| !!! | AGATGGCGATTTTTTGTAAC+GGG | - | chr4_4:7049351-7049370 | None:intergenic | 35.0% |
| !!! | GAGATGGCGATTTTTTGTAA+CGG | - | chr4_4:7049352-7049371 | None:intergenic | 35.0% |
| TTACAAAAAATCGCCATCTC+CGG | + | chr4_4:7049352-7049371 | Msa0666920:CDS | 35.0% | |
| ATGAGGTGATTGAGAATTCA+CGG | - | chr4_4:7049666-7049685 | None:intergenic | 35.0% | |
| AGGGATTTGAATTGGGATTA+GGG | - | chr4_4:7049726-7049745 | None:intergenic | 35.0% | |
| GATGAAGAGGGATTTGAATT+GGG | - | chr4_4:7049733-7049752 | None:intergenic | 35.0% | |
| TGATGAAGAGGGATTTGAAT+TGG | - | chr4_4:7049734-7049753 | None:intergenic | 35.0% | |
| GAAGAAGAAGAAGAAGAAGA+AGG | - | chr4_4:7049763-7049782 | None:intergenic | 35.0% | |
| AAGTTATTCACCGATGATTC+AGG | + | chr4_4:7050002-7050021 | Msa0666920:CDS | 35.0% | |
| ! | AACAGACTTCTAAGGATCAA+AGG | + | chr4_4:7050055-7050074 | Msa0666920:CDS | 35.0% |
| ! | ACAGACTTCTAAGGATCAAA+GGG | + | chr4_4:7050056-7050075 | Msa0666920:CDS | 35.0% |
| ! | TTCTAAGGATCAAAGGGAAT+TGG | + | chr4_4:7050062-7050081 | Msa0666920:CDS | 35.0% |
| GAATTATACTCAGAGTTTGG+AGG | + | chr4_4:7050146-7050165 | Msa0666920:CDS | 35.0% | |
| !!! | AGATGGCGATTTTTTGTAAC+GGG | - | chr4_4:7049351-7049370 | None:intergenic | 35.0% |
| !!! | GAGATGGCGATTTTTTGTAA+CGG | - | chr4_4:7049352-7049371 | None:intergenic | 35.0% |
| TTACAAAAAATCGCCATCTC+CGG | + | chr4_4:7049352-7049371 | Msa0666920:CDS | 35.0% | |
| ATGAGGTGATTGAGAATTCA+CGG | - | chr4_4:7049666-7049685 | None:intergenic | 35.0% | |
| AGGGATTTGAATTGGGATTA+GGG | - | chr4_4:7049726-7049745 | None:intergenic | 35.0% | |
| GATGAAGAGGGATTTGAATT+GGG | - | chr4_4:7049733-7049752 | None:intergenic | 35.0% | |
| TGATGAAGAGGGATTTGAAT+TGG | - | chr4_4:7049734-7049753 | None:intergenic | 35.0% | |
| GAAGAAGAAGAAGAAGAAGA+AGG | - | chr4_4:7049763-7049782 | None:intergenic | 35.0% | |
| AAGTTATTCACCGATGATTC+AGG | + | chr4_4:7050002-7050021 | Msa0666920:CDS | 35.0% | |
| ! | AACAGACTTCTAAGGATCAA+AGG | + | chr4_4:7050055-7050074 | Msa0666920:CDS | 35.0% |
| ! | ACAGACTTCTAAGGATCAAA+GGG | + | chr4_4:7050056-7050075 | Msa0666920:CDS | 35.0% |
| ! | TTCTAAGGATCAAAGGGAAT+TGG | + | chr4_4:7050062-7050081 | Msa0666920:CDS | 35.0% |
| GAATTATACTCAGAGTTTGG+AGG | + | chr4_4:7050146-7050165 | Msa0666920:CDS | 35.0% | |
| !!! | ATGGCGATTTTTTGTAACGG+GGG | - | chr4_4:7049349-7049368 | None:intergenic | 40.0% |
| !!! | GATGGCGATTTTTTGTAACG+GGG | - | chr4_4:7049350-7049369 | None:intergenic | 40.0% |
| TGAATTGGGATTAGGGTTGA+TGG | - | chr4_4:7049719-7049738 | None:intergenic | 40.0% | |
| GAGGGATTTGAATTGGGATT+AGG | - | chr4_4:7049727-7049746 | None:intergenic | 40.0% | |
| GAAGGTGAAGATGATGAAGA+GGG | - | chr4_4:7049745-7049764 | None:intergenic | 40.0% | |
| AGAAGGTGAAGATGATGAAG+AGG | - | chr4_4:7049746-7049765 | None:intergenic | 40.0% | |
| ! | TGAAACCGGGTTGAATGATT+GGG | - | chr4_4:7049893-7049912 | None:intergenic | 40.0% |
| ! | TTGAAACCGGGTTGAATGAT+TGG | - | chr4_4:7049894-7049913 | None:intergenic | 40.0% |
| TATCCCTAATTCTCCGTTTC+CGG | + | chr4_4:7049963-7049982 | Msa0666920:CDS | 40.0% | |
| CTTAACTGACAATCAAGCAC+CGG | - | chr4_4:7049985-7050004 | None:intergenic | 40.0% | |
| TTATCGTCGTCCTGAATCAT+CGG | - | chr4_4:7050015-7050034 | None:intergenic | 40.0% | |
| GAATTGGATGTTTGTGCTGA+AGG | + | chr4_4:7050078-7050097 | Msa0666920:CDS | 40.0% | |
| TGTTTGTGCTGAAGGATATG+AGG | + | chr4_4:7050086-7050105 | Msa0666920:CDS | 40.0% | |
| CTGAAGGATATGAGGTTAAG+AGG | + | chr4_4:7050094-7050113 | Msa0666920:CDS | 40.0% | |
| !! | GAGTAATTTGATGGGTTCTG+AGG | + | chr4_4:7050119-7050138 | Msa0666920:CDS | 40.0% |
| TTCAGCTAAGGTTCTTGAAC+AGG | + | chr4_4:7050227-7050246 | Msa0666920:CDS | 40.0% | |
| !!! | ATGGCGATTTTTTGTAACGG+GGG | - | chr4_4:7049349-7049368 | None:intergenic | 40.0% |
| !!! | GATGGCGATTTTTTGTAACG+GGG | - | chr4_4:7049350-7049369 | None:intergenic | 40.0% |
| TGAATTGGGATTAGGGTTGA+TGG | - | chr4_4:7049719-7049738 | None:intergenic | 40.0% | |
| GAGGGATTTGAATTGGGATT+AGG | - | chr4_4:7049727-7049746 | None:intergenic | 40.0% | |
| GAAGGTGAAGATGATGAAGA+GGG | - | chr4_4:7049745-7049764 | None:intergenic | 40.0% | |
| AGAAGGTGAAGATGATGAAG+AGG | - | chr4_4:7049746-7049765 | None:intergenic | 40.0% | |
| ! | TGAAACCGGGTTGAATGATT+GGG | - | chr4_4:7049893-7049912 | None:intergenic | 40.0% |
| ! | TTGAAACCGGGTTGAATGAT+TGG | - | chr4_4:7049894-7049913 | None:intergenic | 40.0% |
| TATCCCTAATTCTCCGTTTC+CGG | + | chr4_4:7049963-7049982 | Msa0666920:CDS | 40.0% | |
| CTTAACTGACAATCAAGCAC+CGG | - | chr4_4:7049985-7050004 | None:intergenic | 40.0% | |
| TTATCGTCGTCCTGAATCAT+CGG | - | chr4_4:7050015-7050034 | None:intergenic | 40.0% | |
| GAATTGGATGTTTGTGCTGA+AGG | + | chr4_4:7050078-7050097 | Msa0666920:CDS | 40.0% | |
| TGTTTGTGCTGAAGGATATG+AGG | + | chr4_4:7050086-7050105 | Msa0666920:CDS | 40.0% | |
| CTGAAGGATATGAGGTTAAG+AGG | + | chr4_4:7050094-7050113 | Msa0666920:CDS | 40.0% | |
| !! | GAGTAATTTGATGGGTTCTG+AGG | + | chr4_4:7050119-7050138 | Msa0666920:CDS | 40.0% |
| TTCAGCTAAGGTTCTTGAAC+AGG | + | chr4_4:7050227-7050246 | Msa0666920:CDS | 40.0% | |
| !!! | ATTTTTTGTAACGGGGGTGG+TGG | - | chr4_4:7049343-7049362 | None:intergenic | 45.0% |
| ATTGAGAATTCACGGAGGGA+AGG | - | chr4_4:7049658-7049677 | None:intergenic | 45.0% | |
| GGTGATTGAGAATTCACGGA+GGG | - | chr4_4:7049662-7049681 | None:intergenic | 45.0% | |
| AGGTGATTGAGAATTCACGG+AGG | - | chr4_4:7049663-7049682 | None:intergenic | 45.0% | |
| !! | GTTGATGGTGGAGGAGAATT+GGG | - | chr4_4:7049704-7049723 | None:intergenic | 45.0% |
| !! | ATTGGGATTAGGGTTGATGG+TGG | - | chr4_4:7049716-7049735 | None:intergenic | 45.0% |
| CGAATCCCAATCATTCAACC+CGG | + | chr4_4:7049885-7049904 | Msa0666920:CDS | 45.0% | |
| !! | TGACAATCAAGCACCGGAAA+CGG | - | chr4_4:7049979-7049998 | None:intergenic | 45.0% |
| GGTTGAACAGAGTTCAGCTA+AGG | + | chr4_4:7050215-7050234 | Msa0666920:CDS | 45.0% | |
| !!! | ATTTTTTGTAACGGGGGTGG+TGG | - | chr4_4:7049343-7049362 | None:intergenic | 45.0% |
| ATTGAGAATTCACGGAGGGA+AGG | - | chr4_4:7049658-7049677 | None:intergenic | 45.0% | |
| GGTGATTGAGAATTCACGGA+GGG | - | chr4_4:7049662-7049681 | None:intergenic | 45.0% | |
| AGGTGATTGAGAATTCACGG+AGG | - | chr4_4:7049663-7049682 | None:intergenic | 45.0% | |
| !! | GTTGATGGTGGAGGAGAATT+GGG | - | chr4_4:7049704-7049723 | None:intergenic | 45.0% |
| !! | ATTGGGATTAGGGTTGATGG+TGG | - | chr4_4:7049716-7049735 | None:intergenic | 45.0% |
| CGAATCCCAATCATTCAACC+CGG | + | chr4_4:7049885-7049904 | Msa0666920:CDS | 45.0% | |
| !! | TGACAATCAAGCACCGGAAA+CGG | - | chr4_4:7049979-7049998 | None:intergenic | 45.0% |
| GGTTGAACAGAGTTCAGCTA+AGG | + | chr4_4:7050215-7050234 | Msa0666920:CDS | 45.0% | |
| !!! | GCGATTTTTTGTAACGGGGG+TGG | - | chr4_4:7049346-7049365 | None:intergenic | 50.0% |
| ACCTCCACTTCCACATTCTC+CGG | + | chr4_4:7049412-7049431 | Msa0666920:CDS | 50.0% | |
| AATCGTCGGTGAGGTTGAGT+GGG | - | chr4_4:7049468-7049487 | None:intergenic | 50.0% | |
| AGAGAAAGGAGGAAGTGGTG+AGG | - | chr4_4:7049534-7049553 | None:intergenic | 50.0% | |
| AGGAATGAGGGATGAGACGA+CGG | - | chr4_4:7049588-7049607 | None:intergenic | 50.0% | |
| AGAATTCACGGAGGGAAGGA+CGG | - | chr4_4:7049654-7049673 | None:intergenic | 50.0% | |
| !! | GGTTGATGGTGGAGGAGAAT+TGG | - | chr4_4:7049705-7049724 | None:intergenic | 50.0% |
| AACATTGGACCGGCATTTCG+TGG | + | chr4_4:7049925-7049944 | Msa0666920:CDS | 50.0% | |
| CCGTAATGTCCACGAAATGC+CGG | - | chr4_4:7049937-7049956 | None:intergenic | 50.0% | |
| CCGGCATTTCGTGGACATTA+CGG | + | chr4_4:7049934-7049953 | Msa0666920:CDS | 50.0% | |
| GCACCGGAAACGGAGAATTA+GGG | - | chr4_4:7049969-7049988 | None:intergenic | 50.0% | |
| ! | AGCACCGGAAACGGAGAATT+AGG | - | chr4_4:7049970-7049989 | None:intergenic | 50.0% |
| !!! | GCGATTTTTTGTAACGGGGG+TGG | - | chr4_4:7049346-7049365 | None:intergenic | 50.0% |
| ACCTCCACTTCCACATTCTC+CGG | + | chr4_4:7049412-7049431 | Msa0666920:CDS | 50.0% | |
| AATCGTCGGTGAGGTTGAGT+GGG | - | chr4_4:7049468-7049487 | None:intergenic | 50.0% | |
| AGAGAAAGGAGGAAGTGGTG+AGG | - | chr4_4:7049534-7049553 | None:intergenic | 50.0% | |
| AGGAATGAGGGATGAGACGA+CGG | - | chr4_4:7049588-7049607 | None:intergenic | 50.0% | |
| AGAATTCACGGAGGGAAGGA+CGG | - | chr4_4:7049654-7049673 | None:intergenic | 50.0% | |
| !! | GGTTGATGGTGGAGGAGAAT+TGG | - | chr4_4:7049705-7049724 | None:intergenic | 50.0% |
| AACATTGGACCGGCATTTCG+TGG | + | chr4_4:7049925-7049944 | Msa0666920:CDS | 50.0% | |
| CCGTAATGTCCACGAAATGC+CGG | - | chr4_4:7049937-7049956 | None:intergenic | 50.0% | |
| CCGGCATTTCGTGGACATTA+CGG | + | chr4_4:7049934-7049953 | Msa0666920:CDS | 50.0% | |
| GCACCGGAAACGGAGAATTA+GGG | - | chr4_4:7049969-7049988 | None:intergenic | 50.0% | |
| ! | AGCACCGGAAACGGAGAATT+AGG | - | chr4_4:7049970-7049989 | None:intergenic | 50.0% |
| AAGTGGAGGTGGTTGAGAGG+TGG | - | chr4_4:7049402-7049421 | None:intergenic | 55.0% | |
| TGGAAGTGGAGGTGGTTGAG+AGG | - | chr4_4:7049405-7049424 | None:intergenic | 55.0% | |
| GGAGAATGTGGAAGTGGAGG+TGG | - | chr4_4:7049413-7049432 | None:intergenic | 55.0% | |
| ACATTCTCCGGCCTCCTCTT+CGG | + | chr4_4:7049424-7049443 | Msa0666920:CDS | 55.0% | |
| GAGGTTGAGTGGGGTTGTGA+GGG | - | chr4_4:7049458-7049477 | None:intergenic | 55.0% | |
| TGAGGTTGAGTGGGGTTGTG+AGG | - | chr4_4:7049459-7049478 | None:intergenic | 55.0% | |
| ATCGTCGGTGAGGTTGAGTG+GGG | - | chr4_4:7049467-7049486 | None:intergenic | 55.0% | |
| GAATCGTCGGTGAGGTTGAG+TGG | - | chr4_4:7049469-7049488 | None:intergenic | 55.0% | |
| ATGAGGGATGAGACGACGGA+GGG | - | chr4_4:7049584-7049603 | None:intergenic | 55.0% | |
| AATGAGGGATGAGACGACGG+AGG | - | chr4_4:7049585-7049604 | None:intergenic | 55.0% | |
| CAAGGAGGGAGGAGGAATGA+GGG | - | chr4_4:7049600-7049619 | None:intergenic | 55.0% | |
| ATTCCTCCTCCCTCCTTGGT+TGG | + | chr4_4:7049602-7049621 | Msa0666920:CDS | 55.0% | |
| ! | TCCCTCCTTGGTTGGTTCTC+CGG | + | chr4_4:7049610-7049629 | Msa0666920:CDS | 55.0% |
| ACCGGAGAACCAACCAAGGA+GGG | - | chr4_4:7049614-7049633 | None:intergenic | 55.0% | |
| GGAGAGAGAGGAGAGAGATG+AGG | - | chr4_4:7049683-7049702 | None:intergenic | 55.0% | |
| GGAGGAGAATTGGGAGAGAG+AGG | - | chr4_4:7049695-7049714 | None:intergenic | 55.0% | |
| !! | GGGATTAGGGTTGATGGTGG+AGG | - | chr4_4:7049713-7049732 | None:intergenic | 55.0% |
| AAGTGGAGGTGGTTGAGAGG+TGG | - | chr4_4:7049402-7049421 | None:intergenic | 55.0% | |
| TGGAAGTGGAGGTGGTTGAG+AGG | - | chr4_4:7049405-7049424 | None:intergenic | 55.0% | |
| GGAGAATGTGGAAGTGGAGG+TGG | - | chr4_4:7049413-7049432 | None:intergenic | 55.0% | |
| ACATTCTCCGGCCTCCTCTT+CGG | + | chr4_4:7049424-7049443 | Msa0666920:CDS | 55.0% | |
| GAGGTTGAGTGGGGTTGTGA+GGG | - | chr4_4:7049458-7049477 | None:intergenic | 55.0% | |
| TGAGGTTGAGTGGGGTTGTG+AGG | - | chr4_4:7049459-7049478 | None:intergenic | 55.0% | |
| ATCGTCGGTGAGGTTGAGTG+GGG | - | chr4_4:7049467-7049486 | None:intergenic | 55.0% | |
| GAATCGTCGGTGAGGTTGAG+TGG | - | chr4_4:7049469-7049488 | None:intergenic | 55.0% | |
| ATGAGGGATGAGACGACGGA+GGG | - | chr4_4:7049584-7049603 | None:intergenic | 55.0% | |
| AATGAGGGATGAGACGACGG+AGG | - | chr4_4:7049585-7049604 | None:intergenic | 55.0% | |
| CAAGGAGGGAGGAGGAATGA+GGG | - | chr4_4:7049600-7049619 | None:intergenic | 55.0% | |
| ATTCCTCCTCCCTCCTTGGT+TGG | + | chr4_4:7049602-7049621 | Msa0666920:CDS | 55.0% | |
| ! | TCCCTCCTTGGTTGGTTCTC+CGG | + | chr4_4:7049610-7049629 | Msa0666920:CDS | 55.0% |
| ACCGGAGAACCAACCAAGGA+GGG | - | chr4_4:7049614-7049633 | None:intergenic | 55.0% | |
| GGAGAGAGAGGAGAGAGATG+AGG | - | chr4_4:7049683-7049702 | None:intergenic | 55.0% | |
| GGAGGAGAATTGGGAGAGAG+AGG | - | chr4_4:7049695-7049714 | None:intergenic | 55.0% | |
| !! | GGGATTAGGGTTGATGGTGG+AGG | - | chr4_4:7049713-7049732 | None:intergenic | 55.0% |
| ! | CTCTCCATTTTCCGCCGCCA+TGG | + | chr4_4:7049315-7049334 | Msa0666920:exon | 60.0% |
| !! | GGTTGAGAGGTGGTGGAGGA+GGG | - | chr4_4:7049392-7049411 | None:intergenic | 60.0% |
| !! | TGGTTGAGAGGTGGTGGAGG+AGG | - | chr4_4:7049393-7049412 | None:intergenic | 60.0% |
| ! | AGGTGGTTGAGAGGTGGTGG+AGG | - | chr4_4:7049396-7049415 | None:intergenic | 60.0% |
| TGGAGGTGGTTGAGAGGTGG+TGG | - | chr4_4:7049399-7049418 | None:intergenic | 60.0% | |
| GCCGGAGAATGTGGAAGTGG+AGG | - | chr4_4:7049416-7049435 | None:intergenic | 60.0% | |
| GAGGCCGGAGAATGTGGAAG+TGG | - | chr4_4:7049419-7049438 | None:intergenic | 60.0% | |
| GAAGAGGAGGCCGGAGAATG+TGG | - | chr4_4:7049425-7049444 | None:intergenic | 60.0% | |
| TGTCGGAGGAATCGTCGGTG+AGG | - | chr4_4:7049477-7049496 | None:intergenic | 60.0% | |
| ! | GGTGGTGTCGGAGGAATCGT+CGG | - | chr4_4:7049482-7049501 | None:intergenic | 60.0% |
| AGTGGTGAGGAAGCCGGTGA+CGG | - | chr4_4:7049521-7049540 | None:intergenic | 60.0% | |
| GGAGGAAGTGGTGAGGAAGC+CGG | - | chr4_4:7049527-7049546 | None:intergenic | 60.0% | |
| GGGGGAGAGAAAGGAGGAAG+TGG | - | chr4_4:7049539-7049558 | None:intergenic | 60.0% | |
| TCCTCCTTTCTCTCCCCCTC+CGG | + | chr4_4:7049541-7049560 | Msa0666920:CDS | 60.0% | |
| !! | TGGCGTTGATATCGCCGGAG+GGG | - | chr4_4:7049558-7049577 | None:intergenic | 60.0% |
| !! | GTGGCGTTGATATCGCCGGA+GGG | - | chr4_4:7049559-7049578 | None:intergenic | 60.0% |
| !! | GGTGGTGGCGTTGATATCGC+CGG | - | chr4_4:7049563-7049582 | None:intergenic | 60.0% |
| CCAAGGAGGGAGGAGGAATG+AGG | - | chr4_4:7049601-7049620 | None:intergenic | 60.0% | |
| CCTCATTCCTCCTCCCTCCT+TGG | + | chr4_4:7049598-7049617 | Msa0666920:CDS | 60.0% | |
| GAACCAACCAAGGAGGGAGG+AGG | - | chr4_4:7049608-7049627 | None:intergenic | 60.0% | |
| GGAGAACCAACCAAGGAGGG+AGG | - | chr4_4:7049611-7049630 | None:intergenic | 60.0% | |
| GACCGGAGAACCAACCAAGG+AGG | - | chr4_4:7049615-7049634 | None:intergenic | 60.0% | |
| TTCACGGAGGGAAGGACGGA+GGG | - | chr4_4:7049650-7049669 | None:intergenic | 60.0% | |
| ATTCACGGAGGGAAGGACGG+AGG | - | chr4_4:7049651-7049670 | None:intergenic | 60.0% | |
| ! | CTCTCCATTTTCCGCCGCCA+TGG | + | chr4_4:7049315-7049334 | Msa0666920:exon | 60.0% |
| !! | GGTTGAGAGGTGGTGGAGGA+GGG | - | chr4_4:7049392-7049411 | None:intergenic | 60.0% |
| !! | TGGTTGAGAGGTGGTGGAGG+AGG | - | chr4_4:7049393-7049412 | None:intergenic | 60.0% |
| ! | AGGTGGTTGAGAGGTGGTGG+AGG | - | chr4_4:7049396-7049415 | None:intergenic | 60.0% |
| TGGAGGTGGTTGAGAGGTGG+TGG | - | chr4_4:7049399-7049418 | None:intergenic | 60.0% | |
| GCCGGAGAATGTGGAAGTGG+AGG | - | chr4_4:7049416-7049435 | None:intergenic | 60.0% | |
| GAGGCCGGAGAATGTGGAAG+TGG | - | chr4_4:7049419-7049438 | None:intergenic | 60.0% | |
| GAAGAGGAGGCCGGAGAATG+TGG | - | chr4_4:7049425-7049444 | None:intergenic | 60.0% | |
| TGTCGGAGGAATCGTCGGTG+AGG | - | chr4_4:7049477-7049496 | None:intergenic | 60.0% | |
| ! | GGTGGTGTCGGAGGAATCGT+CGG | - | chr4_4:7049482-7049501 | None:intergenic | 60.0% |
| AGTGGTGAGGAAGCCGGTGA+CGG | - | chr4_4:7049521-7049540 | None:intergenic | 60.0% | |
| GGAGGAAGTGGTGAGGAAGC+CGG | - | chr4_4:7049527-7049546 | None:intergenic | 60.0% | |
| GGGGGAGAGAAAGGAGGAAG+TGG | - | chr4_4:7049539-7049558 | None:intergenic | 60.0% | |
| TCCTCCTTTCTCTCCCCCTC+CGG | + | chr4_4:7049541-7049560 | Msa0666920:CDS | 60.0% | |
| !! | TGGCGTTGATATCGCCGGAG+GGG | - | chr4_4:7049558-7049577 | None:intergenic | 60.0% |
| !! | GTGGCGTTGATATCGCCGGA+GGG | - | chr4_4:7049559-7049578 | None:intergenic | 60.0% |
| !! | GGTGGTGGCGTTGATATCGC+CGG | - | chr4_4:7049563-7049582 | None:intergenic | 60.0% |
| CCAAGGAGGGAGGAGGAATG+AGG | - | chr4_4:7049601-7049620 | None:intergenic | 60.0% | |
| CCTCATTCCTCCTCCCTCCT+TGG | + | chr4_4:7049598-7049617 | Msa0666920:CDS | 60.0% | |
| GAACCAACCAAGGAGGGAGG+AGG | - | chr4_4:7049608-7049627 | None:intergenic | 60.0% | |
| GGAGAACCAACCAAGGAGGG+AGG | - | chr4_4:7049611-7049630 | None:intergenic | 60.0% | |
| GACCGGAGAACCAACCAAGG+AGG | - | chr4_4:7049615-7049634 | None:intergenic | 60.0% | |
| TTCACGGAGGGAAGGACGGA+GGG | - | chr4_4:7049650-7049669 | None:intergenic | 60.0% | |
| ATTCACGGAGGGAAGGACGG+AGG | - | chr4_4:7049651-7049670 | None:intergenic | 60.0% | |
| GGCTCCATGGCGGCGGAAAA+TGG | - | chr4_4:7049322-7049341 | None:intergenic | 65.0% | |
| ! | TAACGGGGGTGGTGGCTCCA+TGG | - | chr4_4:7049335-7049354 | None:intergenic | 65.0% |
| GGAGGAGGGAGGAGAGGGTT+GGG | - | chr4_4:7049378-7049397 | None:intergenic | 65.0% | |
| TGGAGGAGGGAGGAGAGGGT+TGG | - | chr4_4:7049379-7049398 | None:intergenic | 65.0% | |
| ! | GTGGTGGAGGAGGGAGGAGA+GGG | - | chr4_4:7049383-7049402 | None:intergenic | 65.0% |
| !! | TGAGAGGTGGTGGAGGAGGG+AGG | - | chr4_4:7049389-7049408 | None:intergenic | 65.0% |
| TGAGGGTGACGTGGCCGAAG+AGG | - | chr4_4:7049441-7049460 | None:intergenic | 65.0% | |
| GTGGGGTTGTGAGGGTGACG+TGG | - | chr4_4:7049450-7049469 | None:intergenic | 65.0% | |
| ATCGCCGGAGGGGGAGAGAA+AGG | - | chr4_4:7049548-7049567 | None:intergenic | 65.0% | |
| !! | GGCGTTGATATCGCCGGAGG+GGG | - | chr4_4:7049557-7049576 | None:intergenic | 65.0% |
| !! | GGTGGCGTTGATATCGCCGG+AGG | - | chr4_4:7049560-7049579 | None:intergenic | 65.0% |
| GATGAGACGACGGAGGGTGG+TGG | - | chr4_4:7049578-7049597 | None:intergenic | 65.0% | |
| AGGGATGAGACGACGGAGGG+TGG | - | chr4_4:7049581-7049600 | None:intergenic | 65.0% | |
| GGCGACCGGAGAACCAACCA+AGG | - | chr4_4:7049618-7049637 | None:intergenic | 65.0% | |
| AAGGACGGAGGGGAGAACGG+CGG | - | chr4_4:7049639-7049658 | None:intergenic | 65.0% | |
| GGGAAGGACGGAGGGGAGAA+CGG | - | chr4_4:7049642-7049661 | None:intergenic | 65.0% | |
| TCACGGAGGGAAGGACGGAG+GGG | - | chr4_4:7049649-7049668 | None:intergenic | 65.0% | |
| GGCTCCATGGCGGCGGAAAA+TGG | - | chr4_4:7049322-7049341 | None:intergenic | 65.0% | |
| ! | TAACGGGGGTGGTGGCTCCA+TGG | - | chr4_4:7049335-7049354 | None:intergenic | 65.0% |
| GGAGGAGGGAGGAGAGGGTT+GGG | - | chr4_4:7049378-7049397 | None:intergenic | 65.0% | |
| TGGAGGAGGGAGGAGAGGGT+TGG | - | chr4_4:7049379-7049398 | None:intergenic | 65.0% | |
| ! | GTGGTGGAGGAGGGAGGAGA+GGG | - | chr4_4:7049383-7049402 | None:intergenic | 65.0% |
| !! | TGAGAGGTGGTGGAGGAGGG+AGG | - | chr4_4:7049389-7049408 | None:intergenic | 65.0% |
| TGAGGGTGACGTGGCCGAAG+AGG | - | chr4_4:7049441-7049460 | None:intergenic | 65.0% | |
| GTGGGGTTGTGAGGGTGACG+TGG | - | chr4_4:7049450-7049469 | None:intergenic | 65.0% | |
| ATCGCCGGAGGGGGAGAGAA+AGG | - | chr4_4:7049548-7049567 | None:intergenic | 65.0% | |
| !! | GGCGTTGATATCGCCGGAGG+GGG | - | chr4_4:7049557-7049576 | None:intergenic | 65.0% |
| !! | GGTGGCGTTGATATCGCCGG+AGG | - | chr4_4:7049560-7049579 | None:intergenic | 65.0% |
| GATGAGACGACGGAGGGTGG+TGG | - | chr4_4:7049578-7049597 | None:intergenic | 65.0% | |
| AGGGATGAGACGACGGAGGG+TGG | - | chr4_4:7049581-7049600 | None:intergenic | 65.0% | |
| GGCGACCGGAGAACCAACCA+AGG | - | chr4_4:7049618-7049637 | None:intergenic | 65.0% | |
| AAGGACGGAGGGGAGAACGG+CGG | - | chr4_4:7049639-7049658 | None:intergenic | 65.0% | |
| GGGAAGGACGGAGGGGAGAA+CGG | - | chr4_4:7049642-7049661 | None:intergenic | 65.0% | |
| TCACGGAGGGAAGGACGGAG+GGG | - | chr4_4:7049649-7049668 | None:intergenic | 65.0% | |
| GGAGAGGGTTGGGCCGGAGA+TGG | - | chr4_4:7049368-7049387 | None:intergenic | 70.0% | |
| GAGGGAGGAGAGGGTTGGGC+CGG | - | chr4_4:7049374-7049393 | None:intergenic | 70.0% | |
| !! | GGTGGTGGAGGAGGGAGGAG+AGG | - | chr4_4:7049384-7049403 | None:intergenic | 70.0% |
| GACGTGGCCGAAGAGGAGGC+CGG | - | chr4_4:7049434-7049453 | None:intergenic | 70.0% | |
| GGGTGACGTGGCCGAAGAGG+AGG | - | chr4_4:7049438-7049457 | None:intergenic | 70.0% | |
| GAGGAGGGTGGGGGTGGTGT+CGG | - | chr4_4:7049494-7049513 | None:intergenic | 70.0% | |
| TGACGGTGGCGAGGAGGGTG+GGG | - | chr4_4:7049504-7049523 | None:intergenic | 70.0% | |
| GTGACGGTGGCGAGGAGGGT+GGG | - | chr4_4:7049505-7049524 | None:intergenic | 70.0% | |
| ACCCTCCTCGCCACCGTCAC+CGG | + | chr4_4:7049505-7049524 | Msa0666920:CDS | 70.0% | |
| ! | GGTGAGGAAGCCGGTGACGG+TGG | - | chr4_4:7049518-7049537 | None:intergenic | 70.0% |
| GCCGGAGGGGGAGAGAAAGG+AGG | - | chr4_4:7049545-7049564 | None:intergenic | 70.0% | |
| GGAGAGGGTTGGGCCGGAGA+TGG | - | chr4_4:7049368-7049387 | None:intergenic | 70.0% | |
| GAGGGAGGAGAGGGTTGGGC+CGG | - | chr4_4:7049374-7049393 | None:intergenic | 70.0% | |
| !! | GGTGGTGGAGGAGGGAGGAG+AGG | - | chr4_4:7049384-7049403 | None:intergenic | 70.0% |
| GACGTGGCCGAAGAGGAGGC+CGG | - | chr4_4:7049434-7049453 | None:intergenic | 70.0% | |
| GGGTGACGTGGCCGAAGAGG+AGG | - | chr4_4:7049438-7049457 | None:intergenic | 70.0% | |
| GAGGAGGGTGGGGGTGGTGT+CGG | - | chr4_4:7049494-7049513 | None:intergenic | 70.0% | |
| TGACGGTGGCGAGGAGGGTG+GGG | - | chr4_4:7049504-7049523 | None:intergenic | 70.0% | |
| GTGACGGTGGCGAGGAGGGT+GGG | - | chr4_4:7049505-7049524 | None:intergenic | 70.0% | |
| ACCCTCCTCGCCACCGTCAC+CGG | + | chr4_4:7049505-7049524 | Msa0666920:CDS | 70.0% | |
| ! | GGTGAGGAAGCCGGTGACGG+TGG | - | chr4_4:7049518-7049537 | None:intergenic | 70.0% |
| GCCGGAGGGGGAGAGAAAGG+AGG | - | chr4_4:7049545-7049564 | None:intergenic | 70.0% | |
| ! | GGGTGGTGGCTCCATGGCGG+CGG | - | chr4_4:7049329-7049348 | None:intergenic | 75.0% |
| ! | CGGGGGTGGTGGCTCCATGG+CGG | - | chr4_4:7049332-7049351 | None:intergenic | 75.0% |
| ! | GAGGGTGGGGGTGGTGTCGG+AGG | - | chr4_4:7049491-7049510 | None:intergenic | 75.0% |
| GACGGTGGCGAGGAGGGTGG+GGG | - | chr4_4:7049503-7049522 | None:intergenic | 75.0% | |
| ! | GGTGACGGTGGCGAGGAGGG+TGG | - | chr4_4:7049506-7049525 | None:intergenic | 75.0% |
| ! | GCCGGTGACGGTGGCGAGGA+GGG | - | chr4_4:7049509-7049528 | None:intergenic | 75.0% |
| ! | AGCCGGTGACGGTGGCGAGG+AGG | - | chr4_4:7049510-7049529 | None:intergenic | 75.0% |
| ! | GGAAGCCGGTGACGGTGGCG+AGG | - | chr4_4:7049513-7049532 | None:intergenic | 75.0% |
| GAGGGGAGAACGGCGGCGAC+CGG | - | chr4_4:7049632-7049651 | None:intergenic | 75.0% | |
| ! | GGGTGGTGGCTCCATGGCGG+CGG | - | chr4_4:7049329-7049348 | None:intergenic | 75.0% |
| ! | CGGGGGTGGTGGCTCCATGG+CGG | - | chr4_4:7049332-7049351 | None:intergenic | 75.0% |
| ! | GAGGGTGGGGGTGGTGTCGG+AGG | - | chr4_4:7049491-7049510 | None:intergenic | 75.0% |
| GACGGTGGCGAGGAGGGTGG+GGG | - | chr4_4:7049503-7049522 | None:intergenic | 75.0% | |
| ! | GGTGACGGTGGCGAGGAGGG+TGG | - | chr4_4:7049506-7049525 | None:intergenic | 75.0% |
| ! | GCCGGTGACGGTGGCGAGGA+GGG | - | chr4_4:7049509-7049528 | None:intergenic | 75.0% |
| ! | AGCCGGTGACGGTGGCGAGG+AGG | - | chr4_4:7049510-7049529 | None:intergenic | 75.0% |
| ! | GGAAGCCGGTGACGGTGGCG+AGG | - | chr4_4:7049513-7049532 | None:intergenic | 75.0% |
| GAGGGGAGAACGGCGGCGAC+CGG | - | chr4_4:7049632-7049651 | None:intergenic | 75.0% | |
| ! | GGTGGCGAGGAGGGTGGGGG+TGG | - | chr4_4:7049500-7049519 | None:intergenic | 80.0% |
| ! | GGTGGCGAGGAGGGTGGGGG+TGG | - | chr4_4:7049500-7049519 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 7049227 | 7050339 | 7049227 | ID=Msa0666920;Name=Msa0666920 |
| chr4_4 | mRNA | 7049227 | 7050339 | 7049227 | ID=Msa0666920-mRNA-1;Parent=Msa0666920;Name=Msa0666920-mRNA-1;_AED=0.16;_eAED=0.16;_QI=107|0|0.5|0.5|1|1|2|0|306 |
| chr4_4 | exon | 7049227 | 7050248 | 7049227 | ID=Msa0666920-mRNA-1:exon:2284;Parent=Msa0666920-mRNA-1 |
| chr4_4 | exon | 7050334 | 7050339 | 7050334 | ID=Msa0666920-mRNA-1:exon:2285;Parent=Msa0666920-mRNA-1 |
| chr4_4 | five_prime_UTR | 7049227 | 7049333 | 7049227 | ID=Msa0666920-mRNA-1:five_prime_utr;Parent=Msa0666920-mRNA-1 |
| chr4_4 | CDS | 7049334 | 7050248 | 7049334 | ID=Msa0666920-mRNA-1:cds;Parent=Msa0666920-mRNA-1 |
| chr4_4 | CDS | 7050334 | 7050339 | 7050334 | ID=Msa0666920-mRNA-1:cds;Parent=Msa0666920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
