Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0629120 | XP_024638685.2 | 96.405 | 306 | 9 | 1 | 1 | 306 | 1 | 304 | 0.0 | 583 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0629120 | A0A396I1V9 | 96.405 | 306 | 9 | 1 | 1 | 306 | 1 | 304 | 0.0 | 583 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0629120 | Msa0666920 | 0.972492 | 7.443540e-135 | -8.615850e-47 |
| Msa0629120 | Msa1089740 | 0.805454 | 1.324478e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0629120 | MtrunA17_Chr4g0005301 | 96.405 | 306 | 9 | 1 | 1 | 306 | 1 | 304 | 0.0 | 583 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0629120 | AT3G08780.1 | 45.016 | 311 | 142 | 7 | 7 | 306 | 6 | 298 | 3.65e-80 | 246 |
| Msa0629120 | AT3G08780.2 | 45.161 | 310 | 141 | 7 | 7 | 305 | 6 | 297 | 1.15e-79 | 244 |
Find 125 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCCCTAATTCTCCGTTTC+CGG | 0.203519 | 4_3:+9967893 | Msa0629120:CDS |
| AGCACCGGAAACGGAGAATT+AGG | 0.227019 | 4_3:-9967897 | None:intergenic |
| GAGGGATTTGAATTGGGATT+AGG | 0.252506 | 4_3:-9967654 | None:intergenic |
| GGCTCCATGGCGGCGGAAAA+TGG | 0.270075 | 4_3:-9967249 | None:intergenic |
| GGTTGATGGTGGAGGAGAAT+TGG | 0.275733 | 4_3:-9967632 | None:intergenic |
| AGGGATTTGAATTGGGATTA+GGG | 0.281463 | 4_3:-9967653 | None:intergenic |
| GTTCAATATCATTAGGATTA+GGG | 0.284271 | 4_3:+9968249 | Msa0629120:intron |
| TGACGGTGGCGAGGAGGGTG+GGG | 0.290935 | 4_3:-9967431 | None:intergenic |
| AAGTTATTCACCGATGATTC+AGG | 0.291186 | 4_3:+9967932 | Msa0629120:CDS |
| TGATGAAGAGGGATTTGAAT+TGG | 0.309752 | 4_3:-9967661 | None:intergenic |
| TGAATTGGGATTAGGGTTGA+TGG | 0.311785 | 4_3:-9967646 | None:intergenic |
| TGGTTGAGAGGTGGTGGAGG+AGG | 0.331963 | 4_3:-9967320 | None:intergenic |
| TTGAAACCGGGTTGAATGAT+TGG | 0.339552 | 4_3:-9967821 | None:intergenic |
| GTTGATGGTGGAGGAGAATT+GGG | 0.347491 | 4_3:-9967631 | None:intergenic |
| GGTGGTGGAGGAGGGAGGAG+AGG | 0.349199 | 4_3:-9967311 | None:intergenic |
| CAAACTCTGAGTATAATTCT+TGG | 0.351406 | 4_3:-9968072 | None:intergenic |
| TCCCTCCTTGGTTGGTTCTC+CGG | 0.356492 | 4_3:+9967540 | Msa0629120:CDS |
| TTAATAATTTCGATTGAAAC+CGG | 0.362748 | 4_3:-9967834 | None:intergenic |
| CCTCATTCCTCCTCCCTCCT+TGG | 0.365897 | 4_3:+9967528 | Msa0629120:CDS |
| TTCTAAGGATCAAAGGGAAT+TGG | 0.368237 | 4_3:+9967992 | Msa0629120:CDS |
| CAAGAATTATACTCAGAGTT+TGG | 0.369134 | 4_3:+9968073 | Msa0629120:CDS |
| TAAGAGGTTGAGTAATTTGA+TGG | 0.370361 | 4_3:+9968040 | Msa0629120:CDS |
| TTCAGCTAAGGTTCTTGAAC+AGG | 0.375440 | 4_3:+9968157 | Msa0629120:CDS |
| GATGAAGAGGGATTTGAATT+GGG | 0.377075 | 4_3:-9967660 | None:intergenic |
| GGAGGAGGGAGGAGAGGGTT+GGG | 0.378427 | 4_3:-9967305 | None:intergenic |
| GGTGACGGTGGCGAGGAGGG+TGG | 0.386005 | 4_3:-9967433 | None:intergenic |
| TAAGATGAAACAGACTTCTA+AGG | 0.389891 | 4_3:+9967977 | Msa0629120:CDS |
| AGGTGGTTGAGAGGTGGTGG+AGG | 0.397582 | 4_3:-9967323 | None:intergenic |
| GGGTGGTGGCTCCATGGCGG+CGG | 0.398544 | 4_3:-9967256 | None:intergenic |
| TGGAGGTGGTTGAGAGGTGG+TGG | 0.402522 | 4_3:-9967326 | None:intergenic |
| ACATTCTCCGGCCTCCTCTT+CGG | 0.403736 | 4_3:+9967354 | Msa0629120:CDS |
| GTGACGGTGGCGAGGAGGGT+GGG | 0.404733 | 4_3:-9967432 | None:intergenic |
| GATTGAGAATTTGACTACTT+TGG | 0.405183 | 4_3:+9968124 | Msa0629120:CDS |
| GAGGGGAGAACGGCGGCGAC+CGG | 0.413709 | 4_3:-9967559 | None:intergenic |
| GGTTGAGAGGTGGTGGAGGA+GGG | 0.415031 | 4_3:-9967319 | None:intergenic |
| GACGGTGGCGAGGAGGGTGG+GGG | 0.416853 | 4_3:-9967430 | None:intergenic |
| GTGGTGGAGGAGGGAGGAGA+GGG | 0.430349 | 4_3:-9967310 | None:intergenic |
| GCCGGTGACGGTGGCGAGGA+GGG | 0.433101 | 4_3:-9967436 | None:intergenic |
| ATTCCTCCTCCCTCCTTGGT+TGG | 0.434522 | 4_3:+9967532 | Msa0629120:CDS |
| TGAAACCGGGTTGAATGATT+GGG | 0.436969 | 4_3:-9967820 | None:intergenic |
| GCACCGGAAACGGAGAATTA+GGG | 0.437747 | 4_3:-9967896 | None:intergenic |
| GAGGGAGGAGAGGGTTGGGC+CGG | 0.442761 | 4_3:-9967301 | None:intergenic |
| AACATTGGACCGGCATTTCG+TGG | 0.443927 | 4_3:+9967855 | Msa0629120:CDS |
| TGGAGGAGGGAGGAGAGGGT+TGG | 0.447135 | 4_3:-9967306 | None:intergenic |
| GATAAGAGAAAGAATAAACT+AGG | 0.460094 | 4_3:-9967726 | None:intergenic |
| CCGGCATTTCGTGGACATTA+CGG | 0.460139 | 4_3:+9967864 | Msa0629120:CDS |
| GGAGGAGAATTGGGAGAGAG+AGG | 0.460193 | 4_3:-9967622 | None:intergenic |
| TGAGAGGTGGTGGAGGAGGG+AGG | 0.461649 | 4_3:-9967316 | None:intergenic |
| GGGAAGGACGGAGGGGAGAA+CGG | 0.463104 | 4_3:-9967569 | None:intergenic |
| GGGATTAGGGTTGATGGTGG+AGG | 0.470945 | 4_3:-9967640 | None:intergenic |
| TGAGGTTGAGTGGGGTTGTG+AGG | 0.472152 | 4_3:-9967386 | None:intergenic |
| GGCGTTGATATCGCCGGAGG+GGG | 0.476101 | 4_3:-9967484 | None:intergenic |
| CTGAAGGATATGAGGTTAAG+AGG | 0.476899 | 4_3:+9968024 | Msa0629120:CDS |
| ACCCTCCTCGCCACCGTCAC+CGG | 0.477489 | 4_3:+9967435 | Msa0629120:CDS |
| AAGGACGGAGGGGAGAACGG+CGG | 0.482547 | 4_3:-9967566 | None:intergenic |
| GAATCGTCGGTGAGGTTGAG+TGG | 0.484785 | 4_3:-9967396 | None:intergenic |
| CGAAATTATTAACATTGGAC+CGG | 0.486993 | 4_3:+9967845 | Msa0629120:CDS |
| TGACAATCAAGCACCGGAAA+CGG | 0.487508 | 4_3:-9967906 | None:intergenic |
| AGAAGGTGAAGATGATGAAG+AGG | 0.491499 | 4_3:-9967673 | None:intergenic |
| TCAATCGAAATTATTAACAT+TGG | 0.494503 | 4_3:+9967840 | Msa0629120:CDS |
| GGAGAGGGTTGGGCCGGAGA+TGG | 0.496307 | 4_3:-9967295 | None:intergenic |
| ACAGACTTCTAAGGATCAAA+GGG | 0.497223 | 4_3:+9967986 | Msa0629120:CDS |
| GATGAGACGACGGAGGGTGG+TGG | 0.504672 | 4_3:-9967505 | None:intergenic |
| GAGGTTGAGTGGGGTTGTGA+GGG | 0.505771 | 4_3:-9967385 | None:intergenic |
| CAAGGAGGGAGGAGGAATGA+GGG | 0.506473 | 4_3:-9967527 | None:intergenic |
| GAGGCCGGAGAATGTGGAAG+TGG | 0.508769 | 4_3:-9967346 | None:intergenic |
| CCAAGGAGGGAGGAGGAATG+AGG | 0.510220 | 4_3:-9967528 | None:intergenic |
| TTCACGGAGGGAAGGACGGA+GGG | 0.514207 | 4_3:-9967577 | None:intergenic |
| GGAGAATGTGGAAGTGGAGG+TGG | 0.514993 | 4_3:-9967340 | None:intergenic |
| ATGAGGTGATTGAGAATTCA+CGG | 0.515113 | 4_3:-9967593 | None:intergenic |
| AAGTGGAGGTGGTTGAGAGG+TGG | 0.515608 | 4_3:-9967329 | None:intergenic |
| AATCGTCGGTGAGGTTGAGT+GGG | 0.518126 | 4_3:-9967395 | None:intergenic |
| ACCTCCACTTCCACATTCTC+CGG | 0.519836 | 4_3:+9967342 | Msa0629120:CDS |
| GAACCAACCAAGGAGGGAGG+AGG | 0.521865 | 4_3:-9967535 | None:intergenic |
| GAAGGTGAAGATGATGAAGA+GGG | 0.522910 | 4_3:-9967672 | None:intergenic |
| AACAGACTTCTAAGGATCAA+AGG | 0.525556 | 4_3:+9967985 | Msa0629120:CDS |
| TGTTTGTGCTGAAGGATATG+AGG | 0.526001 | 4_3:+9968016 | Msa0629120:CDS |
| AGAGAAAGGAGGAAGTGGTG+AGG | 0.527598 | 4_3:-9967461 | None:intergenic |
| ACCGGAGAACCAACCAAGGA+GGG | 0.529014 | 4_3:-9967541 | None:intergenic |
| GAAGAGGAGGCCGGAGAATG+TGG | 0.531295 | 4_3:-9967352 | None:intergenic |
| ATTGGGATTAGGGTTGATGG+TGG | 0.533376 | 4_3:-9967643 | None:intergenic |
| GGTGGTGTCGGAGGAATCGT+CGG | 0.540121 | 4_3:-9967409 | None:intergenic |
| GAGTAATTTGATGGGTTCTG+AGG | 0.546646 | 4_3:+9968049 | Msa0629120:CDS |
| GGTTGAACAGAGTTCAGCTA+AGG | 0.548443 | 4_3:+9968145 | Msa0629120:CDS |
| GGAGGAAGTGGTGAGGAAGC+CGG | 0.549037 | 4_3:-9967454 | None:intergenic |
| CCGTAATGTCCACGAAATGC+CGG | 0.551028 | 4_3:-9967864 | None:intergenic |
| AGGGATGAGACGACGGAGGG+TGG | 0.555698 | 4_3:-9967508 | None:intergenic |
| CGATTTGAAATTGATAAACA+CGG | 0.556504 | 4_3:-9967794 | None:intergenic |
| GTGGCGTTGATATCGCCGGA+GGG | 0.559198 | 4_3:-9967486 | None:intergenic |
| GGGTGACGTGGCCGAAGAGG+AGG | 0.560284 | 4_3:-9967365 | None:intergenic |
| ATAAGAGAAAGAATAAACTA+GGG | 0.562165 | 4_3:-9967725 | None:intergenic |
| TAATAATTTCGATTGAAACC+GGG | 0.565915 | 4_3:-9967833 | None:intergenic |
| AGCCGGTGACGGTGGCGAGG+AGG | 0.566651 | 4_3:-9967437 | None:intergenic |
| GGTGGCGTTGATATCGCCGG+AGG | 0.568236 | 4_3:-9967487 | None:intergenic |
| AGTGGTGAGGAAGCCGGTGA+CGG | 0.572667 | 4_3:-9967448 | None:intergenic |
| GCCGGAGAATGTGGAAGTGG+AGG | 0.575664 | 4_3:-9967343 | None:intergenic |
| TTATCGTCGTCCTGAATCAT+CGG | 0.576845 | 4_3:-9967942 | None:intergenic |
| ATGAGGGATGAGACGACGGA+GGG | 0.577403 | 4_3:-9967511 | None:intergenic |
| AGAATTCACGGAGGGAAGGA+CGG | 0.578218 | 4_3:-9967581 | None:intergenic |
| AAGAGGTTGAGTAATTTGAT+GGG | 0.579839 | 4_3:+9968041 | Msa0629120:CDS |
| CGAATCCCAATCATTCAACC+CGG | 0.582113 | 4_3:+9967815 | Msa0629120:CDS |
| GACGTGGCCGAAGAGGAGGC+CGG | 0.582804 | 4_3:-9967361 | None:intergenic |
| GAATTATACTCAGAGTTTGG+AGG | 0.584124 | 4_3:+9968076 | Msa0629120:CDS |
| GAATTGGATGTTTGTGCTGA+AGG | 0.584667 | 4_3:+9968008 | Msa0629120:CDS |
| GGAGAGAGAGGAGAGAGATG+AGG | 0.585087 | 4_3:-9967610 | None:intergenic |
| GGAAGCCGGTGACGGTGGCG+AGG | 0.593369 | 4_3:-9967440 | None:intergenic |
| ATTGAGAATTCACGGAGGGA+AGG | 0.593655 | 4_3:-9967585 | None:intergenic |
| TGAGGGTGACGTGGCCGAAG+AGG | 0.593756 | 4_3:-9967368 | None:intergenic |
| TCACGGAGGGAAGGACGGAG+GGG | 0.594954 | 4_3:-9967576 | None:intergenic |
| CTTAACTGACAATCAAGCAC+CGG | 0.595833 | 4_3:-9967912 | None:intergenic |
| TGGAAGTGGAGGTGGTTGAG+AGG | 0.600806 | 4_3:-9967332 | None:intergenic |
| GGTGAGGAAGCCGGTGACGG+TGG | 0.603918 | 4_3:-9967445 | None:intergenic |
| ATTCACGGAGGGAAGGACGG+AGG | 0.609111 | 4_3:-9967578 | None:intergenic |
| GTGGGGTTGTGAGGGTGACG+TGG | 0.615643 | 4_3:-9967377 | None:intergenic |
| GACCGGAGAACCAACCAAGG+AGG | 0.617300 | 4_3:-9967542 | None:intergenic |
| GGAGAACCAACCAAGGAGGG+AGG | 0.620479 | 4_3:-9967538 | None:intergenic |
| GGTGGTGGCGTTGATATCGC+CGG | 0.624177 | 4_3:-9967490 | None:intergenic |
| AGGAATGAGGGATGAGACGA+CGG | 0.635189 | 4_3:-9967515 | None:intergenic |
| TGGCGTTGATATCGCCGGAG+GGG | 0.635277 | 4_3:-9967485 | None:intergenic |
| GGCGACCGGAGAACCAACCA+AGG | 0.636303 | 4_3:-9967545 | None:intergenic |
| ATCGTCGGTGAGGTTGAGTG+GGG | 0.665011 | 4_3:-9967394 | None:intergenic |
| TGTCGGAGGAATCGTCGGTG+AGG | 0.668295 | 4_3:-9967404 | None:intergenic |
| GGTGATTGAGAATTCACGGA+GGG | 0.669306 | 4_3:-9967589 | None:intergenic |
| AATGAGGGATGAGACGACGG+AGG | 0.680231 | 4_3:-9967512 | None:intergenic |
| AGGTGATTGAGAATTCACGG+AGG | 0.780130 | 4_3:-9967590 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAGAGAAAGAATAAACTA+GGG | - | chr4_3:9967728-9967747 | None:intergenic | 20.0% |
| !! | TTAATAATTTCGATTGAAAC+CGG | - | chr4_3:9967837-9967856 | None:intergenic | 20.0% |
| !! | TCAATCGAAATTATTAACAT+TGG | + | chr4_3:9967840-9967859 | Msa0629120:CDS | 20.0% |
| !! | ATATGTAGTTCAATATCATT+AGG | + | chr4_3:9968242-9968261 | Msa0629120:intron | 20.0% |
| !! | ATAAGAGAAAGAATAAACTA+GGG | - | chr4_3:9967728-9967747 | None:intergenic | 20.0% |
| !! | TTAATAATTTCGATTGAAAC+CGG | - | chr4_3:9967837-9967856 | None:intergenic | 20.0% |
| !! | TCAATCGAAATTATTAACAT+TGG | + | chr4_3:9967840-9967859 | Msa0629120:CDS | 20.0% |
| !! | ATATGTAGTTCAATATCATT+AGG | + | chr4_3:9968242-9968261 | Msa0629120:intron | 20.0% |
| ! | GATAAGAGAAAGAATAAACT+AGG | - | chr4_3:9967729-9967748 | None:intergenic | 25.0% |
| !!! | TGTGAATTTTGATCAGAAAT+TGG | - | chr4_3:9967756-9967775 | None:intergenic | 25.0% |
| !! | CGATTTGAAATTGATAAACA+CGG | - | chr4_3:9967797-9967816 | None:intergenic | 25.0% |
| ! | TAATAATTTCGATTGAAACC+GGG | - | chr4_3:9967836-9967855 | None:intergenic | 25.0% |
| !!! | TAGTTTACTTTGTTTTTGTG+TGG | + | chr4_3:9968181-9968200 | Msa0629120:intron | 25.0% |
| ! | GATAAGAGAAAGAATAAACT+AGG | - | chr4_3:9967729-9967748 | None:intergenic | 25.0% |
| !!! | TGTGAATTTTGATCAGAAAT+TGG | - | chr4_3:9967756-9967775 | None:intergenic | 25.0% |
| !! | CGATTTGAAATTGATAAACA+CGG | - | chr4_3:9967797-9967816 | None:intergenic | 25.0% |
| ! | TAATAATTTCGATTGAAACC+GGG | - | chr4_3:9967836-9967855 | None:intergenic | 25.0% |
| !!! | TAGTTTACTTTGTTTTTGTG+TGG | + | chr4_3:9968181-9968200 | Msa0629120:intron | 25.0% |
| CGAAATTATTAACATTGGAC+CGG | + | chr4_3:9967845-9967864 | Msa0629120:CDS | 30.0% | |
| TAAGATGAAACAGACTTCTA+AGG | + | chr4_3:9967977-9967996 | Msa0629120:CDS | 30.0% | |
| TAAGAGGTTGAGTAATTTGA+TGG | + | chr4_3:9968040-9968059 | Msa0629120:CDS | 30.0% | |
| AAGAGGTTGAGTAATTTGAT+GGG | + | chr4_3:9968041-9968060 | Msa0629120:CDS | 30.0% | |
| CAAACTCTGAGTATAATTCT+TGG | - | chr4_3:9968075-9968094 | None:intergenic | 30.0% | |
| CAAGAATTATACTCAGAGTT+TGG | + | chr4_3:9968073-9968092 | Msa0629120:CDS | 30.0% | |
| GATTGAGAATTTGACTACTT+TGG | + | chr4_3:9968124-9968143 | Msa0629120:CDS | 30.0% | |
| CGAAATTATTAACATTGGAC+CGG | + | chr4_3:9967845-9967864 | Msa0629120:CDS | 30.0% | |
| TAAGATGAAACAGACTTCTA+AGG | + | chr4_3:9967977-9967996 | Msa0629120:CDS | 30.0% | |
| TAAGAGGTTGAGTAATTTGA+TGG | + | chr4_3:9968040-9968059 | Msa0629120:CDS | 30.0% | |
| AAGAGGTTGAGTAATTTGAT+GGG | + | chr4_3:9968041-9968060 | Msa0629120:CDS | 30.0% | |
| CAAACTCTGAGTATAATTCT+TGG | - | chr4_3:9968075-9968094 | None:intergenic | 30.0% | |
| CAAGAATTATACTCAGAGTT+TGG | + | chr4_3:9968073-9968092 | Msa0629120:CDS | 30.0% | |
| GATTGAGAATTTGACTACTT+TGG | + | chr4_3:9968124-9968143 | Msa0629120:CDS | 30.0% | |
| !!! | AGATGGCGATTTTTTGTAAC+GGG | - | chr4_3:9967281-9967300 | None:intergenic | 35.0% |
| !!! | GAGATGGCGATTTTTTGTAA+CGG | - | chr4_3:9967282-9967301 | None:intergenic | 35.0% |
| TTACAAAAAATCGCCATCTC+CGG | + | chr4_3:9967282-9967301 | Msa0629120:CDS | 35.0% | |
| ATGAGGTGATTGAGAATTCA+CGG | - | chr4_3:9967596-9967615 | None:intergenic | 35.0% | |
| AGGGATTTGAATTGGGATTA+GGG | - | chr4_3:9967656-9967675 | None:intergenic | 35.0% | |
| GATGAAGAGGGATTTGAATT+GGG | - | chr4_3:9967663-9967682 | None:intergenic | 35.0% | |
| TGATGAAGAGGGATTTGAAT+TGG | - | chr4_3:9967664-9967683 | None:intergenic | 35.0% | |
| GAAGAAGAAGAAGAAGAAGA+AGG | - | chr4_3:9967693-9967712 | None:intergenic | 35.0% | |
| AAGTTATTCACCGATGATTC+AGG | + | chr4_3:9967932-9967951 | Msa0629120:CDS | 35.0% | |
| ! | AACAGACTTCTAAGGATCAA+AGG | + | chr4_3:9967985-9968004 | Msa0629120:CDS | 35.0% |
| ! | ACAGACTTCTAAGGATCAAA+GGG | + | chr4_3:9967986-9968005 | Msa0629120:CDS | 35.0% |
| ! | TTCTAAGGATCAAAGGGAAT+TGG | + | chr4_3:9967992-9968011 | Msa0629120:CDS | 35.0% |
| GAATTATACTCAGAGTTTGG+AGG | + | chr4_3:9968076-9968095 | Msa0629120:CDS | 35.0% | |
| !!! | AGATGGCGATTTTTTGTAAC+GGG | - | chr4_3:9967281-9967300 | None:intergenic | 35.0% |
| !!! | GAGATGGCGATTTTTTGTAA+CGG | - | chr4_3:9967282-9967301 | None:intergenic | 35.0% |
| TTACAAAAAATCGCCATCTC+CGG | + | chr4_3:9967282-9967301 | Msa0629120:CDS | 35.0% | |
| ATGAGGTGATTGAGAATTCA+CGG | - | chr4_3:9967596-9967615 | None:intergenic | 35.0% | |
| AGGGATTTGAATTGGGATTA+GGG | - | chr4_3:9967656-9967675 | None:intergenic | 35.0% | |
| GATGAAGAGGGATTTGAATT+GGG | - | chr4_3:9967663-9967682 | None:intergenic | 35.0% | |
| TGATGAAGAGGGATTTGAAT+TGG | - | chr4_3:9967664-9967683 | None:intergenic | 35.0% | |
| GAAGAAGAAGAAGAAGAAGA+AGG | - | chr4_3:9967693-9967712 | None:intergenic | 35.0% | |
| AAGTTATTCACCGATGATTC+AGG | + | chr4_3:9967932-9967951 | Msa0629120:CDS | 35.0% | |
| ! | AACAGACTTCTAAGGATCAA+AGG | + | chr4_3:9967985-9968004 | Msa0629120:CDS | 35.0% |
| ! | ACAGACTTCTAAGGATCAAA+GGG | + | chr4_3:9967986-9968005 | Msa0629120:CDS | 35.0% |
| ! | TTCTAAGGATCAAAGGGAAT+TGG | + | chr4_3:9967992-9968011 | Msa0629120:CDS | 35.0% |
| GAATTATACTCAGAGTTTGG+AGG | + | chr4_3:9968076-9968095 | Msa0629120:CDS | 35.0% | |
| !!! | ATGGCGATTTTTTGTAACGG+GGG | - | chr4_3:9967279-9967298 | None:intergenic | 40.0% |
| !!! | GATGGCGATTTTTTGTAACG+GGG | - | chr4_3:9967280-9967299 | None:intergenic | 40.0% |
| TGAATTGGGATTAGGGTTGA+TGG | - | chr4_3:9967649-9967668 | None:intergenic | 40.0% | |
| GAGGGATTTGAATTGGGATT+AGG | - | chr4_3:9967657-9967676 | None:intergenic | 40.0% | |
| GAAGGTGAAGATGATGAAGA+GGG | - | chr4_3:9967675-9967694 | None:intergenic | 40.0% | |
| AGAAGGTGAAGATGATGAAG+AGG | - | chr4_3:9967676-9967695 | None:intergenic | 40.0% | |
| ! | TGAAACCGGGTTGAATGATT+GGG | - | chr4_3:9967823-9967842 | None:intergenic | 40.0% |
| ! | TTGAAACCGGGTTGAATGAT+TGG | - | chr4_3:9967824-9967843 | None:intergenic | 40.0% |
| TATCCCTAATTCTCCGTTTC+CGG | + | chr4_3:9967893-9967912 | Msa0629120:CDS | 40.0% | |
| CTTAACTGACAATCAAGCAC+CGG | - | chr4_3:9967915-9967934 | None:intergenic | 40.0% | |
| TTATCGTCGTCCTGAATCAT+CGG | - | chr4_3:9967945-9967964 | None:intergenic | 40.0% | |
| GAATTGGATGTTTGTGCTGA+AGG | + | chr4_3:9968008-9968027 | Msa0629120:CDS | 40.0% | |
| TGTTTGTGCTGAAGGATATG+AGG | + | chr4_3:9968016-9968035 | Msa0629120:CDS | 40.0% | |
| CTGAAGGATATGAGGTTAAG+AGG | + | chr4_3:9968024-9968043 | Msa0629120:CDS | 40.0% | |
| !! | GAGTAATTTGATGGGTTCTG+AGG | + | chr4_3:9968049-9968068 | Msa0629120:CDS | 40.0% |
| TTCAGCTAAGGTTCTTGAAC+AGG | + | chr4_3:9968157-9968176 | Msa0629120:CDS | 40.0% | |
| !!! | ATGGCGATTTTTTGTAACGG+GGG | - | chr4_3:9967279-9967298 | None:intergenic | 40.0% |
| !!! | GATGGCGATTTTTTGTAACG+GGG | - | chr4_3:9967280-9967299 | None:intergenic | 40.0% |
| TGAATTGGGATTAGGGTTGA+TGG | - | chr4_3:9967649-9967668 | None:intergenic | 40.0% | |
| GAGGGATTTGAATTGGGATT+AGG | - | chr4_3:9967657-9967676 | None:intergenic | 40.0% | |
| GAAGGTGAAGATGATGAAGA+GGG | - | chr4_3:9967675-9967694 | None:intergenic | 40.0% | |
| AGAAGGTGAAGATGATGAAG+AGG | - | chr4_3:9967676-9967695 | None:intergenic | 40.0% | |
| ! | TGAAACCGGGTTGAATGATT+GGG | - | chr4_3:9967823-9967842 | None:intergenic | 40.0% |
| ! | TTGAAACCGGGTTGAATGAT+TGG | - | chr4_3:9967824-9967843 | None:intergenic | 40.0% |
| TATCCCTAATTCTCCGTTTC+CGG | + | chr4_3:9967893-9967912 | Msa0629120:CDS | 40.0% | |
| CTTAACTGACAATCAAGCAC+CGG | - | chr4_3:9967915-9967934 | None:intergenic | 40.0% | |
| TTATCGTCGTCCTGAATCAT+CGG | - | chr4_3:9967945-9967964 | None:intergenic | 40.0% | |
| GAATTGGATGTTTGTGCTGA+AGG | + | chr4_3:9968008-9968027 | Msa0629120:CDS | 40.0% | |
| TGTTTGTGCTGAAGGATATG+AGG | + | chr4_3:9968016-9968035 | Msa0629120:CDS | 40.0% | |
| CTGAAGGATATGAGGTTAAG+AGG | + | chr4_3:9968024-9968043 | Msa0629120:CDS | 40.0% | |
| !! | GAGTAATTTGATGGGTTCTG+AGG | + | chr4_3:9968049-9968068 | Msa0629120:CDS | 40.0% |
| TTCAGCTAAGGTTCTTGAAC+AGG | + | chr4_3:9968157-9968176 | Msa0629120:CDS | 40.0% | |
| !!! | ATTTTTTGTAACGGGGGTGG+TGG | - | chr4_3:9967273-9967292 | None:intergenic | 45.0% |
| ATTGAGAATTCACGGAGGGA+AGG | - | chr4_3:9967588-9967607 | None:intergenic | 45.0% | |
| GGTGATTGAGAATTCACGGA+GGG | - | chr4_3:9967592-9967611 | None:intergenic | 45.0% | |
| AGGTGATTGAGAATTCACGG+AGG | - | chr4_3:9967593-9967612 | None:intergenic | 45.0% | |
| !! | GTTGATGGTGGAGGAGAATT+GGG | - | chr4_3:9967634-9967653 | None:intergenic | 45.0% |
| !! | ATTGGGATTAGGGTTGATGG+TGG | - | chr4_3:9967646-9967665 | None:intergenic | 45.0% |
| CGAATCCCAATCATTCAACC+CGG | + | chr4_3:9967815-9967834 | Msa0629120:CDS | 45.0% | |
| !! | TGACAATCAAGCACCGGAAA+CGG | - | chr4_3:9967909-9967928 | None:intergenic | 45.0% |
| GGTTGAACAGAGTTCAGCTA+AGG | + | chr4_3:9968145-9968164 | Msa0629120:CDS | 45.0% | |
| !!! | ATTTTTTGTAACGGGGGTGG+TGG | - | chr4_3:9967273-9967292 | None:intergenic | 45.0% |
| ATTGAGAATTCACGGAGGGA+AGG | - | chr4_3:9967588-9967607 | None:intergenic | 45.0% | |
| GGTGATTGAGAATTCACGGA+GGG | - | chr4_3:9967592-9967611 | None:intergenic | 45.0% | |
| AGGTGATTGAGAATTCACGG+AGG | - | chr4_3:9967593-9967612 | None:intergenic | 45.0% | |
| !! | GTTGATGGTGGAGGAGAATT+GGG | - | chr4_3:9967634-9967653 | None:intergenic | 45.0% |
| !! | ATTGGGATTAGGGTTGATGG+TGG | - | chr4_3:9967646-9967665 | None:intergenic | 45.0% |
| CGAATCCCAATCATTCAACC+CGG | + | chr4_3:9967815-9967834 | Msa0629120:CDS | 45.0% | |
| !! | TGACAATCAAGCACCGGAAA+CGG | - | chr4_3:9967909-9967928 | None:intergenic | 45.0% |
| GGTTGAACAGAGTTCAGCTA+AGG | + | chr4_3:9968145-9968164 | Msa0629120:CDS | 45.0% | |
| !!! | GCGATTTTTTGTAACGGGGG+TGG | - | chr4_3:9967276-9967295 | None:intergenic | 50.0% |
| ACCTCCACTTCCACATTCTC+CGG | + | chr4_3:9967342-9967361 | Msa0629120:CDS | 50.0% | |
| AATCGTCGGTGAGGTTGAGT+GGG | - | chr4_3:9967398-9967417 | None:intergenic | 50.0% | |
| AGAGAAAGGAGGAAGTGGTG+AGG | - | chr4_3:9967464-9967483 | None:intergenic | 50.0% | |
| AGGAATGAGGGATGAGACGA+CGG | - | chr4_3:9967518-9967537 | None:intergenic | 50.0% | |
| AGAATTCACGGAGGGAAGGA+CGG | - | chr4_3:9967584-9967603 | None:intergenic | 50.0% | |
| !! | GGTTGATGGTGGAGGAGAAT+TGG | - | chr4_3:9967635-9967654 | None:intergenic | 50.0% |
| AACATTGGACCGGCATTTCG+TGG | + | chr4_3:9967855-9967874 | Msa0629120:CDS | 50.0% | |
| CCGTAATGTCCACGAAATGC+CGG | - | chr4_3:9967867-9967886 | None:intergenic | 50.0% | |
| CCGGCATTTCGTGGACATTA+CGG | + | chr4_3:9967864-9967883 | Msa0629120:CDS | 50.0% | |
| GCACCGGAAACGGAGAATTA+GGG | - | chr4_3:9967899-9967918 | None:intergenic | 50.0% | |
| ! | AGCACCGGAAACGGAGAATT+AGG | - | chr4_3:9967900-9967919 | None:intergenic | 50.0% |
| !!! | GCGATTTTTTGTAACGGGGG+TGG | - | chr4_3:9967276-9967295 | None:intergenic | 50.0% |
| ACCTCCACTTCCACATTCTC+CGG | + | chr4_3:9967342-9967361 | Msa0629120:CDS | 50.0% | |
| AATCGTCGGTGAGGTTGAGT+GGG | - | chr4_3:9967398-9967417 | None:intergenic | 50.0% | |
| AGAGAAAGGAGGAAGTGGTG+AGG | - | chr4_3:9967464-9967483 | None:intergenic | 50.0% | |
| AGGAATGAGGGATGAGACGA+CGG | - | chr4_3:9967518-9967537 | None:intergenic | 50.0% | |
| AGAATTCACGGAGGGAAGGA+CGG | - | chr4_3:9967584-9967603 | None:intergenic | 50.0% | |
| !! | GGTTGATGGTGGAGGAGAAT+TGG | - | chr4_3:9967635-9967654 | None:intergenic | 50.0% |
| AACATTGGACCGGCATTTCG+TGG | + | chr4_3:9967855-9967874 | Msa0629120:CDS | 50.0% | |
| CCGTAATGTCCACGAAATGC+CGG | - | chr4_3:9967867-9967886 | None:intergenic | 50.0% | |
| CCGGCATTTCGTGGACATTA+CGG | + | chr4_3:9967864-9967883 | Msa0629120:CDS | 50.0% | |
| GCACCGGAAACGGAGAATTA+GGG | - | chr4_3:9967899-9967918 | None:intergenic | 50.0% | |
| ! | AGCACCGGAAACGGAGAATT+AGG | - | chr4_3:9967900-9967919 | None:intergenic | 50.0% |
| AAGTGGAGGTGGTTGAGAGG+TGG | - | chr4_3:9967332-9967351 | None:intergenic | 55.0% | |
| TGGAAGTGGAGGTGGTTGAG+AGG | - | chr4_3:9967335-9967354 | None:intergenic | 55.0% | |
| GGAGAATGTGGAAGTGGAGG+TGG | - | chr4_3:9967343-9967362 | None:intergenic | 55.0% | |
| ACATTCTCCGGCCTCCTCTT+CGG | + | chr4_3:9967354-9967373 | Msa0629120:CDS | 55.0% | |
| GAGGTTGAGTGGGGTTGTGA+GGG | - | chr4_3:9967388-9967407 | None:intergenic | 55.0% | |
| TGAGGTTGAGTGGGGTTGTG+AGG | - | chr4_3:9967389-9967408 | None:intergenic | 55.0% | |
| ATCGTCGGTGAGGTTGAGTG+GGG | - | chr4_3:9967397-9967416 | None:intergenic | 55.0% | |
| GAATCGTCGGTGAGGTTGAG+TGG | - | chr4_3:9967399-9967418 | None:intergenic | 55.0% | |
| ATGAGGGATGAGACGACGGA+GGG | - | chr4_3:9967514-9967533 | None:intergenic | 55.0% | |
| AATGAGGGATGAGACGACGG+AGG | - | chr4_3:9967515-9967534 | None:intergenic | 55.0% | |
| CAAGGAGGGAGGAGGAATGA+GGG | - | chr4_3:9967530-9967549 | None:intergenic | 55.0% | |
| ATTCCTCCTCCCTCCTTGGT+TGG | + | chr4_3:9967532-9967551 | Msa0629120:CDS | 55.0% | |
| ! | TCCCTCCTTGGTTGGTTCTC+CGG | + | chr4_3:9967540-9967559 | Msa0629120:CDS | 55.0% |
| ACCGGAGAACCAACCAAGGA+GGG | - | chr4_3:9967544-9967563 | None:intergenic | 55.0% | |
| GGAGAGAGAGGAGAGAGATG+AGG | - | chr4_3:9967613-9967632 | None:intergenic | 55.0% | |
| GGAGGAGAATTGGGAGAGAG+AGG | - | chr4_3:9967625-9967644 | None:intergenic | 55.0% | |
| !! | GGGATTAGGGTTGATGGTGG+AGG | - | chr4_3:9967643-9967662 | None:intergenic | 55.0% |
| AAGTGGAGGTGGTTGAGAGG+TGG | - | chr4_3:9967332-9967351 | None:intergenic | 55.0% | |
| TGGAAGTGGAGGTGGTTGAG+AGG | - | chr4_3:9967335-9967354 | None:intergenic | 55.0% | |
| GGAGAATGTGGAAGTGGAGG+TGG | - | chr4_3:9967343-9967362 | None:intergenic | 55.0% | |
| ACATTCTCCGGCCTCCTCTT+CGG | + | chr4_3:9967354-9967373 | Msa0629120:CDS | 55.0% | |
| GAGGTTGAGTGGGGTTGTGA+GGG | - | chr4_3:9967388-9967407 | None:intergenic | 55.0% | |
| TGAGGTTGAGTGGGGTTGTG+AGG | - | chr4_3:9967389-9967408 | None:intergenic | 55.0% | |
| ATCGTCGGTGAGGTTGAGTG+GGG | - | chr4_3:9967397-9967416 | None:intergenic | 55.0% | |
| GAATCGTCGGTGAGGTTGAG+TGG | - | chr4_3:9967399-9967418 | None:intergenic | 55.0% | |
| ATGAGGGATGAGACGACGGA+GGG | - | chr4_3:9967514-9967533 | None:intergenic | 55.0% | |
| AATGAGGGATGAGACGACGG+AGG | - | chr4_3:9967515-9967534 | None:intergenic | 55.0% | |
| CAAGGAGGGAGGAGGAATGA+GGG | - | chr4_3:9967530-9967549 | None:intergenic | 55.0% | |
| ATTCCTCCTCCCTCCTTGGT+TGG | + | chr4_3:9967532-9967551 | Msa0629120:CDS | 55.0% | |
| ! | TCCCTCCTTGGTTGGTTCTC+CGG | + | chr4_3:9967540-9967559 | Msa0629120:CDS | 55.0% |
| ACCGGAGAACCAACCAAGGA+GGG | - | chr4_3:9967544-9967563 | None:intergenic | 55.0% | |
| GGAGAGAGAGGAGAGAGATG+AGG | - | chr4_3:9967613-9967632 | None:intergenic | 55.0% | |
| GGAGGAGAATTGGGAGAGAG+AGG | - | chr4_3:9967625-9967644 | None:intergenic | 55.0% | |
| !! | GGGATTAGGGTTGATGGTGG+AGG | - | chr4_3:9967643-9967662 | None:intergenic | 55.0% |
| ! | CTCTCCATTTTCCGCCGCCA+TGG | + | chr4_3:9967245-9967264 | Msa0629120:exon | 60.0% |
| !! | GGTTGAGAGGTGGTGGAGGA+GGG | - | chr4_3:9967322-9967341 | None:intergenic | 60.0% |
| !! | TGGTTGAGAGGTGGTGGAGG+AGG | - | chr4_3:9967323-9967342 | None:intergenic | 60.0% |
| ! | AGGTGGTTGAGAGGTGGTGG+AGG | - | chr4_3:9967326-9967345 | None:intergenic | 60.0% |
| TGGAGGTGGTTGAGAGGTGG+TGG | - | chr4_3:9967329-9967348 | None:intergenic | 60.0% | |
| GCCGGAGAATGTGGAAGTGG+AGG | - | chr4_3:9967346-9967365 | None:intergenic | 60.0% | |
| GAGGCCGGAGAATGTGGAAG+TGG | - | chr4_3:9967349-9967368 | None:intergenic | 60.0% | |
| GAAGAGGAGGCCGGAGAATG+TGG | - | chr4_3:9967355-9967374 | None:intergenic | 60.0% | |
| TGTCGGAGGAATCGTCGGTG+AGG | - | chr4_3:9967407-9967426 | None:intergenic | 60.0% | |
| ! | GGTGGTGTCGGAGGAATCGT+CGG | - | chr4_3:9967412-9967431 | None:intergenic | 60.0% |
| AGTGGTGAGGAAGCCGGTGA+CGG | - | chr4_3:9967451-9967470 | None:intergenic | 60.0% | |
| GGAGGAAGTGGTGAGGAAGC+CGG | - | chr4_3:9967457-9967476 | None:intergenic | 60.0% | |
| GGGGGAGAGAAAGGAGGAAG+TGG | - | chr4_3:9967469-9967488 | None:intergenic | 60.0% | |
| TCCTCCTTTCTCTCCCCCTC+CGG | + | chr4_3:9967471-9967490 | Msa0629120:CDS | 60.0% | |
| !! | TGGCGTTGATATCGCCGGAG+GGG | - | chr4_3:9967488-9967507 | None:intergenic | 60.0% |
| !! | GTGGCGTTGATATCGCCGGA+GGG | - | chr4_3:9967489-9967508 | None:intergenic | 60.0% |
| !! | GGTGGTGGCGTTGATATCGC+CGG | - | chr4_3:9967493-9967512 | None:intergenic | 60.0% |
| CCAAGGAGGGAGGAGGAATG+AGG | - | chr4_3:9967531-9967550 | None:intergenic | 60.0% | |
| CCTCATTCCTCCTCCCTCCT+TGG | + | chr4_3:9967528-9967547 | Msa0629120:CDS | 60.0% | |
| GAACCAACCAAGGAGGGAGG+AGG | - | chr4_3:9967538-9967557 | None:intergenic | 60.0% | |
| GGAGAACCAACCAAGGAGGG+AGG | - | chr4_3:9967541-9967560 | None:intergenic | 60.0% | |
| GACCGGAGAACCAACCAAGG+AGG | - | chr4_3:9967545-9967564 | None:intergenic | 60.0% | |
| TTCACGGAGGGAAGGACGGA+GGG | - | chr4_3:9967580-9967599 | None:intergenic | 60.0% | |
| ATTCACGGAGGGAAGGACGG+AGG | - | chr4_3:9967581-9967600 | None:intergenic | 60.0% | |
| ! | CTCTCCATTTTCCGCCGCCA+TGG | + | chr4_3:9967245-9967264 | Msa0629120:exon | 60.0% |
| !! | GGTTGAGAGGTGGTGGAGGA+GGG | - | chr4_3:9967322-9967341 | None:intergenic | 60.0% |
| !! | TGGTTGAGAGGTGGTGGAGG+AGG | - | chr4_3:9967323-9967342 | None:intergenic | 60.0% |
| ! | AGGTGGTTGAGAGGTGGTGG+AGG | - | chr4_3:9967326-9967345 | None:intergenic | 60.0% |
| TGGAGGTGGTTGAGAGGTGG+TGG | - | chr4_3:9967329-9967348 | None:intergenic | 60.0% | |
| GCCGGAGAATGTGGAAGTGG+AGG | - | chr4_3:9967346-9967365 | None:intergenic | 60.0% | |
| GAGGCCGGAGAATGTGGAAG+TGG | - | chr4_3:9967349-9967368 | None:intergenic | 60.0% | |
| GAAGAGGAGGCCGGAGAATG+TGG | - | chr4_3:9967355-9967374 | None:intergenic | 60.0% | |
| TGTCGGAGGAATCGTCGGTG+AGG | - | chr4_3:9967407-9967426 | None:intergenic | 60.0% | |
| ! | GGTGGTGTCGGAGGAATCGT+CGG | - | chr4_3:9967412-9967431 | None:intergenic | 60.0% |
| AGTGGTGAGGAAGCCGGTGA+CGG | - | chr4_3:9967451-9967470 | None:intergenic | 60.0% | |
| GGAGGAAGTGGTGAGGAAGC+CGG | - | chr4_3:9967457-9967476 | None:intergenic | 60.0% | |
| GGGGGAGAGAAAGGAGGAAG+TGG | - | chr4_3:9967469-9967488 | None:intergenic | 60.0% | |
| TCCTCCTTTCTCTCCCCCTC+CGG | + | chr4_3:9967471-9967490 | Msa0629120:CDS | 60.0% | |
| !! | TGGCGTTGATATCGCCGGAG+GGG | - | chr4_3:9967488-9967507 | None:intergenic | 60.0% |
| !! | GTGGCGTTGATATCGCCGGA+GGG | - | chr4_3:9967489-9967508 | None:intergenic | 60.0% |
| !! | GGTGGTGGCGTTGATATCGC+CGG | - | chr4_3:9967493-9967512 | None:intergenic | 60.0% |
| CCAAGGAGGGAGGAGGAATG+AGG | - | chr4_3:9967531-9967550 | None:intergenic | 60.0% | |
| CCTCATTCCTCCTCCCTCCT+TGG | + | chr4_3:9967528-9967547 | Msa0629120:CDS | 60.0% | |
| GAACCAACCAAGGAGGGAGG+AGG | - | chr4_3:9967538-9967557 | None:intergenic | 60.0% | |
| GGAGAACCAACCAAGGAGGG+AGG | - | chr4_3:9967541-9967560 | None:intergenic | 60.0% | |
| GACCGGAGAACCAACCAAGG+AGG | - | chr4_3:9967545-9967564 | None:intergenic | 60.0% | |
| TTCACGGAGGGAAGGACGGA+GGG | - | chr4_3:9967580-9967599 | None:intergenic | 60.0% | |
| ATTCACGGAGGGAAGGACGG+AGG | - | chr4_3:9967581-9967600 | None:intergenic | 60.0% | |
| GGCTCCATGGCGGCGGAAAA+TGG | - | chr4_3:9967252-9967271 | None:intergenic | 65.0% | |
| ! | TAACGGGGGTGGTGGCTCCA+TGG | - | chr4_3:9967265-9967284 | None:intergenic | 65.0% |
| GGAGGAGGGAGGAGAGGGTT+GGG | - | chr4_3:9967308-9967327 | None:intergenic | 65.0% | |
| TGGAGGAGGGAGGAGAGGGT+TGG | - | chr4_3:9967309-9967328 | None:intergenic | 65.0% | |
| ! | GTGGTGGAGGAGGGAGGAGA+GGG | - | chr4_3:9967313-9967332 | None:intergenic | 65.0% |
| !! | TGAGAGGTGGTGGAGGAGGG+AGG | - | chr4_3:9967319-9967338 | None:intergenic | 65.0% |
| TGAGGGTGACGTGGCCGAAG+AGG | - | chr4_3:9967371-9967390 | None:intergenic | 65.0% | |
| GTGGGGTTGTGAGGGTGACG+TGG | - | chr4_3:9967380-9967399 | None:intergenic | 65.0% | |
| ATCGCCGGAGGGGGAGAGAA+AGG | - | chr4_3:9967478-9967497 | None:intergenic | 65.0% | |
| !! | GGCGTTGATATCGCCGGAGG+GGG | - | chr4_3:9967487-9967506 | None:intergenic | 65.0% |
| !! | GGTGGCGTTGATATCGCCGG+AGG | - | chr4_3:9967490-9967509 | None:intergenic | 65.0% |
| GATGAGACGACGGAGGGTGG+TGG | - | chr4_3:9967508-9967527 | None:intergenic | 65.0% | |
| AGGGATGAGACGACGGAGGG+TGG | - | chr4_3:9967511-9967530 | None:intergenic | 65.0% | |
| GGCGACCGGAGAACCAACCA+AGG | - | chr4_3:9967548-9967567 | None:intergenic | 65.0% | |
| AAGGACGGAGGGGAGAACGG+CGG | - | chr4_3:9967569-9967588 | None:intergenic | 65.0% | |
| GGGAAGGACGGAGGGGAGAA+CGG | - | chr4_3:9967572-9967591 | None:intergenic | 65.0% | |
| TCACGGAGGGAAGGACGGAG+GGG | - | chr4_3:9967579-9967598 | None:intergenic | 65.0% | |
| GGCTCCATGGCGGCGGAAAA+TGG | - | chr4_3:9967252-9967271 | None:intergenic | 65.0% | |
| ! | TAACGGGGGTGGTGGCTCCA+TGG | - | chr4_3:9967265-9967284 | None:intergenic | 65.0% |
| GGAGGAGGGAGGAGAGGGTT+GGG | - | chr4_3:9967308-9967327 | None:intergenic | 65.0% | |
| TGGAGGAGGGAGGAGAGGGT+TGG | - | chr4_3:9967309-9967328 | None:intergenic | 65.0% | |
| ! | GTGGTGGAGGAGGGAGGAGA+GGG | - | chr4_3:9967313-9967332 | None:intergenic | 65.0% |
| !! | TGAGAGGTGGTGGAGGAGGG+AGG | - | chr4_3:9967319-9967338 | None:intergenic | 65.0% |
| TGAGGGTGACGTGGCCGAAG+AGG | - | chr4_3:9967371-9967390 | None:intergenic | 65.0% | |
| GTGGGGTTGTGAGGGTGACG+TGG | - | chr4_3:9967380-9967399 | None:intergenic | 65.0% | |
| ATCGCCGGAGGGGGAGAGAA+AGG | - | chr4_3:9967478-9967497 | None:intergenic | 65.0% | |
| !! | GGCGTTGATATCGCCGGAGG+GGG | - | chr4_3:9967487-9967506 | None:intergenic | 65.0% |
| !! | GGTGGCGTTGATATCGCCGG+AGG | - | chr4_3:9967490-9967509 | None:intergenic | 65.0% |
| GATGAGACGACGGAGGGTGG+TGG | - | chr4_3:9967508-9967527 | None:intergenic | 65.0% | |
| AGGGATGAGACGACGGAGGG+TGG | - | chr4_3:9967511-9967530 | None:intergenic | 65.0% | |
| GGCGACCGGAGAACCAACCA+AGG | - | chr4_3:9967548-9967567 | None:intergenic | 65.0% | |
| AAGGACGGAGGGGAGAACGG+CGG | - | chr4_3:9967569-9967588 | None:intergenic | 65.0% | |
| GGGAAGGACGGAGGGGAGAA+CGG | - | chr4_3:9967572-9967591 | None:intergenic | 65.0% | |
| TCACGGAGGGAAGGACGGAG+GGG | - | chr4_3:9967579-9967598 | None:intergenic | 65.0% | |
| GGAGAGGGTTGGGCCGGAGA+TGG | - | chr4_3:9967298-9967317 | None:intergenic | 70.0% | |
| GAGGGAGGAGAGGGTTGGGC+CGG | - | chr4_3:9967304-9967323 | None:intergenic | 70.0% | |
| !! | GGTGGTGGAGGAGGGAGGAG+AGG | - | chr4_3:9967314-9967333 | None:intergenic | 70.0% |
| GACGTGGCCGAAGAGGAGGC+CGG | - | chr4_3:9967364-9967383 | None:intergenic | 70.0% | |
| GGGTGACGTGGCCGAAGAGG+AGG | - | chr4_3:9967368-9967387 | None:intergenic | 70.0% | |
| GAGGAGGGTGGGGGTGGTGT+CGG | - | chr4_3:9967424-9967443 | None:intergenic | 70.0% | |
| TGACGGTGGCGAGGAGGGTG+GGG | - | chr4_3:9967434-9967453 | None:intergenic | 70.0% | |
| GTGACGGTGGCGAGGAGGGT+GGG | - | chr4_3:9967435-9967454 | None:intergenic | 70.0% | |
| ACCCTCCTCGCCACCGTCAC+CGG | + | chr4_3:9967435-9967454 | Msa0629120:CDS | 70.0% | |
| ! | GGTGAGGAAGCCGGTGACGG+TGG | - | chr4_3:9967448-9967467 | None:intergenic | 70.0% |
| GCCGGAGGGGGAGAGAAAGG+AGG | - | chr4_3:9967475-9967494 | None:intergenic | 70.0% | |
| GGAGAGGGTTGGGCCGGAGA+TGG | - | chr4_3:9967298-9967317 | None:intergenic | 70.0% | |
| GAGGGAGGAGAGGGTTGGGC+CGG | - | chr4_3:9967304-9967323 | None:intergenic | 70.0% | |
| !! | GGTGGTGGAGGAGGGAGGAG+AGG | - | chr4_3:9967314-9967333 | None:intergenic | 70.0% |
| GACGTGGCCGAAGAGGAGGC+CGG | - | chr4_3:9967364-9967383 | None:intergenic | 70.0% | |
| GGGTGACGTGGCCGAAGAGG+AGG | - | chr4_3:9967368-9967387 | None:intergenic | 70.0% | |
| GAGGAGGGTGGGGGTGGTGT+CGG | - | chr4_3:9967424-9967443 | None:intergenic | 70.0% | |
| TGACGGTGGCGAGGAGGGTG+GGG | - | chr4_3:9967434-9967453 | None:intergenic | 70.0% | |
| GTGACGGTGGCGAGGAGGGT+GGG | - | chr4_3:9967435-9967454 | None:intergenic | 70.0% | |
| ACCCTCCTCGCCACCGTCAC+CGG | + | chr4_3:9967435-9967454 | Msa0629120:CDS | 70.0% | |
| ! | GGTGAGGAAGCCGGTGACGG+TGG | - | chr4_3:9967448-9967467 | None:intergenic | 70.0% |
| GCCGGAGGGGGAGAGAAAGG+AGG | - | chr4_3:9967475-9967494 | None:intergenic | 70.0% | |
| ! | GGGTGGTGGCTCCATGGCGG+CGG | - | chr4_3:9967259-9967278 | None:intergenic | 75.0% |
| ! | CGGGGGTGGTGGCTCCATGG+CGG | - | chr4_3:9967262-9967281 | None:intergenic | 75.0% |
| ! | GAGGGTGGGGGTGGTGTCGG+AGG | - | chr4_3:9967421-9967440 | None:intergenic | 75.0% |
| GACGGTGGCGAGGAGGGTGG+GGG | - | chr4_3:9967433-9967452 | None:intergenic | 75.0% | |
| ! | GGTGACGGTGGCGAGGAGGG+TGG | - | chr4_3:9967436-9967455 | None:intergenic | 75.0% |
| ! | GCCGGTGACGGTGGCGAGGA+GGG | - | chr4_3:9967439-9967458 | None:intergenic | 75.0% |
| ! | AGCCGGTGACGGTGGCGAGG+AGG | - | chr4_3:9967440-9967459 | None:intergenic | 75.0% |
| ! | GGAAGCCGGTGACGGTGGCG+AGG | - | chr4_3:9967443-9967462 | None:intergenic | 75.0% |
| GAGGGGAGAACGGCGGCGAC+CGG | - | chr4_3:9967562-9967581 | None:intergenic | 75.0% | |
| ! | GGGTGGTGGCTCCATGGCGG+CGG | - | chr4_3:9967259-9967278 | None:intergenic | 75.0% |
| ! | CGGGGGTGGTGGCTCCATGG+CGG | - | chr4_3:9967262-9967281 | None:intergenic | 75.0% |
| ! | GAGGGTGGGGGTGGTGTCGG+AGG | - | chr4_3:9967421-9967440 | None:intergenic | 75.0% |
| GACGGTGGCGAGGAGGGTGG+GGG | - | chr4_3:9967433-9967452 | None:intergenic | 75.0% | |
| ! | GGTGACGGTGGCGAGGAGGG+TGG | - | chr4_3:9967436-9967455 | None:intergenic | 75.0% |
| ! | GCCGGTGACGGTGGCGAGGA+GGG | - | chr4_3:9967439-9967458 | None:intergenic | 75.0% |
| ! | AGCCGGTGACGGTGGCGAGG+AGG | - | chr4_3:9967440-9967459 | None:intergenic | 75.0% |
| ! | GGAAGCCGGTGACGGTGGCG+AGG | - | chr4_3:9967443-9967462 | None:intergenic | 75.0% |
| GAGGGGAGAACGGCGGCGAC+CGG | - | chr4_3:9967562-9967581 | None:intergenic | 75.0% | |
| ! | GGTGGCGAGGAGGGTGGGGG+TGG | - | chr4_3:9967430-9967449 | None:intergenic | 80.0% |
| ! | GGTGGCGAGGAGGGTGGGGG+TGG | - | chr4_3:9967430-9967449 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 9967157 | 9968269 | 9967157 | ID=Msa0629120;Name=Msa0629120 |
| chr4_3 | mRNA | 9967157 | 9968269 | 9967157 | ID=Msa0629120-mRNA-1;Parent=Msa0629120;Name=Msa0629120-mRNA-1;_AED=0.18;_eAED=0.18;_QI=107|0|0.5|0.5|1|1|2|0|306 |
| chr4_3 | exon | 9967157 | 9968178 | 9967157 | ID=Msa0629120-mRNA-1:exon:2983;Parent=Msa0629120-mRNA-1 |
| chr4_3 | exon | 9968264 | 9968269 | 9968264 | ID=Msa0629120-mRNA-1:exon:2984;Parent=Msa0629120-mRNA-1 |
| chr4_3 | five_prime_UTR | 9967157 | 9967263 | 9967157 | ID=Msa0629120-mRNA-1:five_prime_utr;Parent=Msa0629120-mRNA-1 |
| chr4_3 | CDS | 9967264 | 9968178 | 9967264 | ID=Msa0629120-mRNA-1:cds;Parent=Msa0629120-mRNA-1 |
| chr4_3 | CDS | 9968264 | 9968269 | 9968264 | ID=Msa0629120-mRNA-1:cds;Parent=Msa0629120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
