Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0669070 | XP_003604785.1 | 99.670 | 303 | 1 | 0 | 1 | 303 | 1 | 303 | 0.0 | 618 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0669070 | sp|O81845|PUMP1_ARATH | 82.566 | 304 | 51 | 2 | 1 | 303 | 1 | 303 | 0.0 | 523 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0669070 | G7JR69 | 99.670 | 303 | 1 | 0 | 1 | 303 | 1 | 303 | 0.0 | 618 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0630500 | Msa0669070 | 0.838773 | 2.356095e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0669070 | MtrunA17_Chr4g0008061 | 99.670 | 303 | 1 | 0 | 1 | 303 | 1 | 303 | 0.0 | 618 |
| Msa0669070 | MtrunA17_Chr7g0241521 | 88.667 | 300 | 34 | 0 | 4 | 303 | 6 | 305 | 0.0 | 560 |
| Msa0669070 | MtrunA17_Chr3g0103681 | 75.676 | 296 | 71 | 1 | 1 | 295 | 1 | 296 | 2.19e-159 | 446 |
| Msa0669070 | MtrunA17_Chr3g0133111 | 36.246 | 309 | 173 | 4 | 15 | 300 | 6 | 313 | 2.65e-60 | 194 |
| Msa0669070 | MtrunA17_Chr3g0133111 | 27.222 | 180 | 101 | 4 | 122 | 271 | 5 | 184 | 7.28e-11 | 62.0 |
| Msa0669070 | MtrunA17_Chr5g0412401 | 35.873 | 315 | 171 | 3 | 15 | 298 | 6 | 320 | 2.66e-60 | 195 |
| Msa0669070 | MtrunA17_Chr8g0367641 | 36.538 | 312 | 170 | 6 | 15 | 300 | 6 | 315 | 8.59e-59 | 191 |
| Msa0669070 | MtrunA17_Chr1g0196921 | 36.111 | 288 | 169 | 5 | 18 | 297 | 17 | 297 | 3.23e-58 | 189 |
| Msa0669070 | MtrunA17_Chr1g0196921 | 29.787 | 188 | 120 | 3 | 118 | 296 | 13 | 197 | 1.52e-15 | 75.5 |
| Msa0669070 | MtrunA17_Chr8g0378951 | 32.192 | 292 | 177 | 4 | 15 | 299 | 21 | 298 | 5.24e-39 | 139 |
| Msa0669070 | MtrunA17_Chr4g0028531 | 28.852 | 305 | 185 | 10 | 17 | 303 | 24 | 314 | 1.99e-31 | 119 |
| Msa0669070 | MtrunA17_Chr4g0028531 | 28.495 | 186 | 115 | 6 | 112 | 287 | 15 | 192 | 3.81e-11 | 62.8 |
| Msa0669070 | MtrunA17_Chr1g0196161 | 34.270 | 178 | 105 | 2 | 126 | 297 | 4 | 175 | 1.91e-28 | 107 |
| Msa0669070 | MtrunA17_Chr8g0372531 | 28.920 | 287 | 175 | 7 | 31 | 298 | 30 | 306 | 1.74e-25 | 103 |
| Msa0669070 | MtrunA17_Chr7g0252401 | 32.624 | 282 | 158 | 8 | 25 | 295 | 217 | 477 | 3.98e-24 | 101 |
| Msa0669070 | MtrunA17_Chr2g0296061 | 23.899 | 318 | 203 | 7 | 16 | 300 | 16 | 327 | 2.17e-23 | 97.8 |
| Msa0669070 | MtrunA17_Chr4g0067231 | 25.857 | 321 | 197 | 10 | 16 | 301 | 15 | 329 | 2.40e-23 | 97.8 |
| Msa0669070 | MtrunA17_Chr4g0067231 | 26.267 | 217 | 130 | 6 | 3 | 201 | 117 | 321 | 7.38e-12 | 65.1 |
| Msa0669070 | MtrunA17_Chr1g0195101 | 28.767 | 292 | 178 | 10 | 27 | 303 | 33 | 309 | 1.42e-22 | 95.5 |
| Msa0669070 | MtrunA17_Chr4g0006851 | 25.357 | 280 | 186 | 7 | 26 | 296 | 100 | 365 | 2.99e-22 | 95.5 |
| Msa0669070 | MtrunA17_Chr7g0269701 | 27.551 | 294 | 189 | 8 | 16 | 296 | 23 | 305 | 1.27e-20 | 90.1 |
| Msa0669070 | MtrunA17_Chr5g0411411 | 29.643 | 280 | 171 | 10 | 31 | 294 | 25 | 294 | 2.80e-20 | 89.0 |
| Msa0669070 | MtrunA17_Chr5g0411411 | 26.500 | 200 | 132 | 3 | 110 | 296 | 2 | 199 | 2.02e-15 | 75.1 |
| Msa0669070 | MtrunA17_Chr5g0411411 | 27.225 | 191 | 126 | 4 | 17 | 205 | 118 | 297 | 1.91e-14 | 72.4 |
| Msa0669070 | MtrunA17_Chr7g0242311 | 24.597 | 248 | 172 | 6 | 29 | 275 | 101 | 334 | 3.37e-20 | 89.7 |
| Msa0669070 | MtrunA17_Chr7g0242311 | 25.758 | 198 | 126 | 3 | 8 | 205 | 180 | 356 | 2.08e-11 | 63.9 |
| Msa0669070 | MtrunA17_Chr7g0275411 | 27.164 | 335 | 199 | 11 | 3 | 297 | 5 | 334 | 4.84e-20 | 89.0 |
| Msa0669070 | MtrunA17_Chr7g0240341 | 25.503 | 298 | 199 | 8 | 20 | 302 | 30 | 319 | 9.99e-20 | 87.8 |
| Msa0669070 | MtrunA17_Chr8g0366791 | 28.772 | 285 | 167 | 10 | 31 | 294 | 25 | 294 | 1.44e-19 | 87.0 |
| Msa0669070 | MtrunA17_Chr8g0366791 | 29.327 | 208 | 131 | 4 | 110 | 303 | 2 | 207 | 2.71e-19 | 86.3 |
| Msa0669070 | MtrunA17_Chr8g0366791 | 27.638 | 199 | 138 | 3 | 9 | 205 | 103 | 297 | 4.18e-15 | 74.3 |
| Msa0669070 | MtrunA17_Chr3g0135801 | 25.547 | 274 | 193 | 4 | 31 | 296 | 50 | 320 | 2.04e-19 | 87.0 |
| Msa0669070 | MtrunA17_Chr5g0396801 | 25.552 | 317 | 192 | 9 | 9 | 294 | 32 | 335 | 2.65e-19 | 86.7 |
| Msa0669070 | MtrunA17_Chr5g0396801 | 26.471 | 204 | 131 | 4 | 15 | 205 | 141 | 338 | 6.18e-14 | 71.2 |
| Msa0669070 | MtrunA17_Chr8g0347451 | 25.305 | 328 | 198 | 10 | 2 | 294 | 35 | 350 | 2.32e-18 | 84.3 |
| Msa0669070 | MtrunA17_Chr8g0347451 | 27.184 | 206 | 129 | 3 | 15 | 205 | 154 | 353 | 5.24e-16 | 77.4 |
| Msa0669070 | MtrunA17_Chr8g0383321 | 27.143 | 280 | 157 | 8 | 26 | 296 | 63 | 304 | 4.10e-18 | 83.2 |
| Msa0669070 | MtrunA17_Chr8g0385571 | 27.891 | 294 | 179 | 10 | 15 | 295 | 227 | 500 | 6.75e-18 | 84.0 |
| Msa0669070 | MtrunA17_Chr5g0423111 | 25.887 | 282 | 185 | 7 | 27 | 296 | 35 | 304 | 1.60e-16 | 79.0 |
| Msa0669070 | MtrunA17_Chr3g0135861 | 24.503 | 302 | 196 | 6 | 17 | 296 | 37 | 328 | 4.93e-16 | 77.4 |
| Msa0669070 | MtrunA17_Chr1g0201361 | 27.737 | 274 | 161 | 9 | 26 | 295 | 62 | 302 | 7.28e-16 | 76.6 |
| Msa0669070 | MtrunA17_Chr3g0126331 | 25.153 | 326 | 181 | 10 | 17 | 280 | 46 | 370 | 8.27e-16 | 77.0 |
| Msa0669070 | MtrunA17_Chr7g0219891 | 25.175 | 286 | 189 | 8 | 27 | 296 | 33 | 309 | 9.09e-16 | 76.3 |
| Msa0669070 | MtrunA17_Chr2g0328891 | 25.325 | 308 | 208 | 9 | 5 | 296 | 56 | 357 | 2.01e-15 | 75.9 |
| Msa0669070 | MtrunA17_Chr3g0131501 | 25.510 | 294 | 186 | 9 | 15 | 295 | 205 | 478 | 2.32e-15 | 76.3 |
| Msa0669070 | MtrunA17_Chr4g0051841 | 25.180 | 278 | 171 | 8 | 11 | 274 | 25 | 279 | 2.94e-15 | 75.1 |
| Msa0669070 | MtrunA17_Chr2g0293621 | 27.622 | 286 | 173 | 8 | 34 | 297 | 46 | 319 | 3.16e-15 | 75.1 |
| Msa0669070 | MtrunA17_Chr2g0331771 | 23.704 | 270 | 183 | 7 | 12 | 272 | 153 | 408 | 3.54e-15 | 75.5 |
| Msa0669070 | MtrunA17_Chr2g0331771 | 28.824 | 170 | 113 | 4 | 31 | 199 | 265 | 427 | 7.21e-12 | 65.5 |
| Msa0669070 | MtrunA17_Chr4g0046981 | 30.682 | 176 | 110 | 6 | 31 | 202 | 28 | 195 | 1.38e-14 | 72.8 |
| Msa0669070 | MtrunA17_Chr4g0004571 | 28.235 | 170 | 112 | 4 | 31 | 199 | 126 | 286 | 1.87e-14 | 72.4 |
| Msa0669070 | MtrunA17_Chr4g0004571 | 23.826 | 298 | 199 | 8 | 10 | 296 | 11 | 291 | 9.08e-14 | 70.5 |
| Msa0669070 | MtrunA17_Chr6g0455381 | 23.875 | 289 | 189 | 7 | 27 | 296 | 29 | 305 | 3.81e-14 | 71.6 |
| Msa0669070 | MtrunA17_Chr1g0200171 | 24.345 | 267 | 175 | 7 | 31 | 295 | 541 | 782 | 6.33e-14 | 72.4 |
| Msa0669070 | MtrunA17_Chr3g0086811 | 23.585 | 318 | 202 | 9 | 5 | 291 | 18 | 325 | 3.92e-13 | 68.9 |
| Msa0669070 | MtrunA17_Chr8g0352031 | 25.725 | 276 | 183 | 9 | 10 | 271 | 63 | 330 | 1.18e-12 | 67.8 |
| Msa0669070 | MtrunA17_Chr6g0461981 | 27.313 | 227 | 133 | 8 | 24 | 237 | 72 | 279 | 4.05e-12 | 65.9 |
| Msa0669070 | MtrunA17_Chr8g0385891 | 26.531 | 245 | 143 | 9 | 11 | 237 | 64 | 289 | 6.76e-12 | 65.5 |
| Msa0669070 | MtrunA17_Chr3g0088301 | 25.993 | 277 | 184 | 9 | 15 | 278 | 93 | 361 | 8.41e-12 | 65.1 |
| Msa0669070 | MtrunA17_Chr4g0040341 | 24.812 | 266 | 187 | 9 | 15 | 271 | 75 | 336 | 1.02e-11 | 65.1 |
| Msa0669070 | MtrunA17_Chr5g0407451 | 28.804 | 184 | 105 | 5 | 21 | 200 | 27 | 188 | 1.96e-11 | 63.5 |
| Msa0669070 | MtrunA17_Chr6g0488081 | 22.118 | 321 | 213 | 10 | 1 | 298 | 1 | 307 | 3.53e-11 | 63.2 |
| Msa0669070 | MtrunA17_Chr8g0393031 | 21.269 | 268 | 202 | 6 | 15 | 275 | 18 | 283 | 8.16e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0669070 | AT3G54110.1 | 82.566 | 304 | 51 | 2 | 1 | 303 | 1 | 303 | 0.0 | 523 |
| Msa0669070 | AT5G58970.1 | 72.759 | 290 | 79 | 0 | 6 | 295 | 7 | 296 | 9.98e-166 | 462 |
| Msa0669070 | AT5G58970.1 | 27.083 | 192 | 126 | 4 | 17 | 207 | 122 | 300 | 9.36e-17 | 79.3 |
| Msa0669070 | AT5G58970.2 | 66.171 | 269 | 85 | 2 | 6 | 272 | 7 | 271 | 7.92e-128 | 365 |
| Msa0669070 | AT1G14140.1 | 37.063 | 286 | 170 | 4 | 18 | 297 | 19 | 300 | 9.70e-62 | 198 |
| Msa0669070 | AT1G14140.1 | 30.151 | 199 | 122 | 4 | 112 | 296 | 9 | 204 | 6.33e-17 | 80.1 |
| Msa0669070 | AT4G24570.1 | 38.188 | 309 | 165 | 4 | 14 | 298 | 5 | 311 | 1.06e-60 | 196 |
| Msa0669070 | AT2G22500.1 | 37.377 | 305 | 169 | 3 | 15 | 298 | 6 | 309 | 3.12e-59 | 192 |
| Msa0669070 | AT5G09470.1 | 39.331 | 239 | 141 | 3 | 66 | 301 | 99 | 336 | 1.89e-50 | 170 |
| Msa0669070 | AT5G09470.1 | 28.814 | 177 | 107 | 3 | 31 | 202 | 167 | 329 | 7.45e-15 | 74.3 |
| Msa0669070 | AT4G03115.1 | 34.256 | 289 | 167 | 5 | 15 | 297 | 38 | 309 | 1.16e-48 | 165 |
| Msa0669070 | AT4G03115.3 | 34.256 | 289 | 167 | 5 | 15 | 297 | 70 | 341 | 3.01e-48 | 164 |
| Msa0669070 | AT4G03115.6 | 34.146 | 246 | 145 | 4 | 58 | 297 | 12 | 246 | 5.11e-43 | 148 |
| Msa0669070 | AT4G03115.6 | 25.714 | 175 | 110 | 4 | 10 | 179 | 61 | 220 | 9.25e-11 | 61.6 |
| Msa0669070 | AT4G03115.5 | 34.034 | 238 | 140 | 4 | 66 | 297 | 12 | 238 | 4.13e-42 | 145 |
| Msa0669070 | AT4G03115.5 | 26.087 | 184 | 116 | 4 | 10 | 188 | 53 | 221 | 7.03e-11 | 61.6 |
| Msa0669070 | AT5G19760.1 | 31.613 | 310 | 188 | 4 | 1 | 300 | 1 | 296 | 1.36e-40 | 143 |
| Msa0669070 | AT4G03115.2 | 35.437 | 206 | 116 | 4 | 15 | 220 | 38 | 226 | 1.22e-30 | 115 |
| Msa0669070 | AT4G03115.4 | 35.610 | 205 | 115 | 4 | 15 | 219 | 38 | 225 | 2.28e-30 | 114 |
| Msa0669070 | AT5G01340.1 | 28.028 | 289 | 182 | 8 | 17 | 292 | 19 | 294 | 2.33e-27 | 108 |
| Msa0669070 | AT5G01340.1 | 32.275 | 189 | 117 | 5 | 18 | 201 | 113 | 295 | 2.19e-14 | 72.8 |
| Msa0669070 | AT5G48970.1 | 26.168 | 321 | 195 | 8 | 16 | 300 | 23 | 337 | 2.90e-26 | 106 |
| Msa0669070 | AT5G66380.1 | 30.132 | 302 | 182 | 11 | 16 | 298 | 10 | 301 | 1.99e-24 | 100 |
| Msa0669070 | AT5G66380.1 | 28.986 | 207 | 131 | 6 | 15 | 213 | 110 | 308 | 4.53e-15 | 74.7 |
| Msa0669070 | AT5G61810.2 | 30.070 | 286 | 171 | 8 | 17 | 295 | 67 | 330 | 4.68e-23 | 97.4 |
| Msa0669070 | AT3G21390.1 | 25.402 | 311 | 191 | 6 | 21 | 296 | 25 | 329 | 4.92e-23 | 97.4 |
| Msa0669070 | AT3G51870.1 | 25.735 | 272 | 187 | 6 | 26 | 296 | 102 | 359 | 5.34e-23 | 98.2 |
| Msa0669070 | AT3G21390.2 | 25.402 | 311 | 191 | 6 | 21 | 296 | 47 | 351 | 8.10e-23 | 97.1 |
| Msa0669070 | AT5G61810.1 | 30.935 | 278 | 163 | 8 | 25 | 295 | 218 | 473 | 2.39e-22 | 97.1 |
| Msa0669070 | AT5G01500.1 | 26.667 | 270 | 183 | 6 | 28 | 296 | 132 | 387 | 2.64e-22 | 96.7 |
| Msa0669070 | AT2G47490.1 | 29.577 | 284 | 171 | 10 | 27 | 296 | 31 | 299 | 3.63e-22 | 94.7 |
| Msa0669070 | AT5G46800.2 | 29.433 | 282 | 172 | 9 | 31 | 294 | 24 | 296 | 4.67e-22 | 94.4 |
| Msa0669070 | AT5G46800.2 | 27.041 | 196 | 127 | 2 | 117 | 296 | 6 | 201 | 1.36e-17 | 81.6 |
| Msa0669070 | AT5G46800.2 | 32.000 | 200 | 117 | 6 | 12 | 205 | 113 | 299 | 1.51e-16 | 79.0 |
| Msa0669070 | AT5G46800.3 | 29.433 | 282 | 172 | 9 | 31 | 294 | 24 | 296 | 4.67e-22 | 94.4 |
| Msa0669070 | AT5G46800.3 | 27.041 | 196 | 127 | 2 | 117 | 296 | 6 | 201 | 1.36e-17 | 81.6 |
| Msa0669070 | AT5G46800.3 | 32.000 | 200 | 117 | 6 | 12 | 205 | 113 | 299 | 1.51e-16 | 79.0 |
| Msa0669070 | AT5G46800.1 | 29.433 | 282 | 172 | 9 | 31 | 294 | 24 | 296 | 4.67e-22 | 94.4 |
| Msa0669070 | AT5G46800.1 | 27.041 | 196 | 127 | 2 | 117 | 296 | 6 | 201 | 1.36e-17 | 81.6 |
| Msa0669070 | AT5G46800.1 | 32.000 | 200 | 117 | 6 | 12 | 205 | 113 | 299 | 1.51e-16 | 79.0 |
| Msa0669070 | AT3G53940.1 | 26.280 | 293 | 195 | 6 | 21 | 300 | 79 | 363 | 8.89e-21 | 91.7 |
| Msa0669070 | AT5G07320.1 | 29.787 | 282 | 161 | 9 | 25 | 295 | 219 | 474 | 1.09e-20 | 92.4 |
| Msa0669070 | AT5G56450.1 | 27.586 | 290 | 171 | 11 | 31 | 296 | 50 | 324 | 3.12e-19 | 86.7 |
| Msa0669070 | AT5G56450.1 | 25.000 | 192 | 130 | 5 | 14 | 203 | 144 | 323 | 3.19e-11 | 63.5 |
| Msa0669070 | AT3G55640.1 | 24.606 | 317 | 216 | 8 | 1 | 303 | 24 | 331 | 4.59e-19 | 86.3 |
| Msa0669070 | AT3G55640.4 | 24.606 | 317 | 216 | 8 | 1 | 303 | 24 | 331 | 4.59e-19 | 86.3 |
| Msa0669070 | AT5G48970.2 | 25.000 | 272 | 168 | 7 | 59 | 300 | 1 | 266 | 2.32e-18 | 83.6 |
| Msa0669070 | AT4G01100.3 | 28.620 | 297 | 166 | 11 | 31 | 294 | 8 | 291 | 2.69e-18 | 84.0 |
| Msa0669070 | AT4G01100.3 | 27.670 | 206 | 128 | 5 | 15 | 205 | 95 | 294 | 1.28e-13 | 70.5 |
| Msa0669070 | AT4G01100.1 | 28.620 | 297 | 166 | 11 | 31 | 294 | 58 | 341 | 2.80e-18 | 84.3 |
| Msa0669070 | AT4G01100.1 | 27.670 | 206 | 128 | 5 | 15 | 205 | 145 | 344 | 1.89e-13 | 70.5 |
| Msa0669070 | AT4G01100.1 | 28.902 | 173 | 107 | 5 | 115 | 275 | 38 | 206 | 2.13e-12 | 67.4 |
| Msa0669070 | AT1G25380.1 | 26.370 | 292 | 180 | 11 | 27 | 300 | 35 | 309 | 3.45e-18 | 84.3 |
| Msa0669070 | AT1G25380.2 | 26.370 | 292 | 180 | 11 | 27 | 300 | 35 | 309 | 3.45e-18 | 84.3 |
| Msa0669070 | AT2G37890.1 | 27.273 | 297 | 187 | 11 | 21 | 300 | 51 | 335 | 4.04e-17 | 80.9 |
| Msa0669070 | AT4G01100.2 | 27.653 | 311 | 165 | 11 | 31 | 294 | 58 | 355 | 4.81e-17 | 80.9 |
| Msa0669070 | AT4G01100.2 | 28.218 | 202 | 124 | 5 | 19 | 205 | 163 | 358 | 1.27e-13 | 70.9 |
| Msa0669070 | AT4G27940.1 | 24.405 | 336 | 194 | 7 | 5 | 280 | 55 | 390 | 4.82e-17 | 81.3 |
| Msa0669070 | AT1G79900.1 | 25.461 | 271 | 175 | 7 | 31 | 295 | 32 | 281 | 2.70e-16 | 78.2 |
| Msa0669070 | AT5G15640.1 | 26.190 | 294 | 178 | 9 | 27 | 296 | 40 | 318 | 3.39e-15 | 75.1 |
| Msa0669070 | AT5G15640.2 | 26.190 | 294 | 178 | 9 | 27 | 296 | 33 | 311 | 3.41e-15 | 75.1 |
| Msa0669070 | AT2G26360.1 | 26.429 | 280 | 174 | 7 | 21 | 293 | 121 | 375 | 3.43e-15 | 75.9 |
| Msa0669070 | AT4G39460.2 | 25.170 | 294 | 165 | 10 | 15 | 295 | 58 | 309 | 1.22e-14 | 73.6 |
| Msa0669070 | AT4G39460.1 | 25.170 | 294 | 165 | 10 | 15 | 295 | 58 | 309 | 1.22e-14 | 73.6 |
| Msa0669070 | AT4G39460.3 | 25.170 | 294 | 165 | 10 | 15 | 295 | 58 | 309 | 1.22e-14 | 73.6 |
| Msa0669070 | AT1G07030.1 | 29.775 | 178 | 118 | 4 | 119 | 295 | 40 | 211 | 1.43e-14 | 73.6 |
| Msa0669070 | AT4G28390.1 | 24.382 | 283 | 201 | 7 | 5 | 278 | 73 | 351 | 2.95e-14 | 72.8 |
| Msa0669070 | AT4G28390.2 | 24.382 | 283 | 201 | 7 | 5 | 278 | 73 | 351 | 2.95e-14 | 72.8 |
| Msa0669070 | AT5G51050.1 | 27.148 | 291 | 182 | 10 | 15 | 295 | 223 | 493 | 8.43e-14 | 72.0 |
| Msa0669070 | AT5G13490.1 | 25.000 | 276 | 185 | 9 | 10 | 271 | 83 | 350 | 1.27e-13 | 71.2 |
| Msa0669070 | AT5G13490.2 | 25.000 | 276 | 185 | 9 | 10 | 271 | 83 | 350 | 1.27e-13 | 71.2 |
| Msa0669070 | AT1G34065.2 | 24.415 | 299 | 165 | 10 | 14 | 296 | 74 | 327 | 1.41e-13 | 70.5 |
| Msa0669070 | AT1G74240.1 | 25.606 | 289 | 177 | 9 | 15 | 275 | 36 | 314 | 1.52e-13 | 70.9 |
| Msa0669070 | AT1G34065.1 | 24.415 | 299 | 165 | 10 | 14 | 296 | 81 | 334 | 1.89e-13 | 70.5 |
| Msa0669070 | AT3G08580.2 | 25.725 | 276 | 183 | 9 | 10 | 271 | 79 | 346 | 5.33e-13 | 69.3 |
| Msa0669070 | AT3G08580.1 | 25.725 | 276 | 183 | 9 | 10 | 271 | 79 | 346 | 5.33e-13 | 69.3 |
| Msa0669070 | AT3G55640.2 | 26.316 | 209 | 138 | 6 | 1 | 202 | 24 | 223 | 6.23e-13 | 67.8 |
| Msa0669070 | AT3G55640.3 | 26.316 | 209 | 138 | 6 | 1 | 202 | 24 | 223 | 6.23e-13 | 67.8 |
| Msa0669070 | AT2G33820.4 | 27.419 | 248 | 155 | 8 | 2 | 231 | 1 | 241 | 6.80e-13 | 68.2 |
| Msa0669070 | AT3G53940.2 | 27.404 | 208 | 137 | 4 | 21 | 222 | 79 | 278 | 9.23e-13 | 67.8 |
| Msa0669070 | AT2G17270.1 | 26.966 | 267 | 154 | 8 | 21 | 274 | 28 | 266 | 9.32e-13 | 68.2 |
| Msa0669070 | AT2G33820.1 | 27.937 | 315 | 195 | 11 | 2 | 295 | 1 | 304 | 1.68e-12 | 67.4 |
| Msa0669070 | AT1G74240.2 | 26.007 | 273 | 164 | 9 | 31 | 275 | 4 | 266 | 1.79e-12 | 67.4 |
| Msa0669070 | AT4G32400.1 | 24.739 | 287 | 189 | 8 | 17 | 295 | 116 | 383 | 4.70e-12 | 66.6 |
| Msa0669070 | AT4G26180.2 | 22.105 | 285 | 190 | 8 | 11 | 276 | 17 | 288 | 9.41e-12 | 64.7 |
| Msa0669070 | AT4G26180.1 | 22.105 | 285 | 190 | 8 | 11 | 276 | 17 | 288 | 1.60e-11 | 64.7 |
| Msa0669070 | AT1G14560.3 | 27.230 | 213 | 139 | 7 | 9 | 209 | 17 | 225 | 2.45e-11 | 62.8 |
| Msa0669070 | AT1G14560.2 | 28.342 | 187 | 119 | 6 | 9 | 183 | 115 | 298 | 3.12e-11 | 63.5 |
| Msa0669070 | AT1G14560.1 | 27.230 | 213 | 139 | 7 | 9 | 209 | 115 | 323 | 4.56e-11 | 63.2 |
| Msa0669070 | AT5G17400.1 | 26.866 | 201 | 130 | 6 | 11 | 207 | 115 | 302 | 7.02e-11 | 62.4 |
Find 112 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAACATACATCATTCTTTA+AGG | 0.113360 | 4_4:+10641074 | None:intergenic |
| AAAGGATTCCTCCCAAATTT+TGG | 0.150450 | 4_4:-10640519 | Msa0669070:CDS |
| GATCCTAGCCGTCCAAAATT+TGG | 0.180743 | 4_4:+10640507 | None:intergenic |
| ACTCATCTCTTTGCTGGCCT+TGG | 0.214926 | 4_4:-10641571 | Msa0669070:CDS |
| CTCTTTGCTGGCCTTGGGGC+AGG | 0.217922 | 4_4:-10641565 | Msa0669070:CDS |
| GCGTTTGAGAAATGAGAATT+TGG | 0.226877 | 4_4:+10644313 | None:intergenic |
| CCCAACATACCCTTGTATTT+AGG | 0.228978 | 4_4:+10642524 | None:intergenic |
| CTCATCTCTTTGCTGGCCTT+GGG | 0.285161 | 4_4:-10641570 | Msa0669070:CDS |
| ATGATTAAATGTATTTATAA+TGG | 0.285266 | 4_4:+10639921 | None:intergenic |
| ATTCGTATTGTACCTGTTCT+AGG | 0.285927 | 4_4:+10640460 | None:intergenic |
| ACCAAAGGAGAGGTTGGATT+TGG | 0.317483 | 4_4:+10644231 | None:intergenic |
| AACAGGTGCTGTGGCAATTA+TGG | 0.322321 | 4_4:-10642045 | Msa0669070:intron |
| CATGAGCTCAATCAATTTCA+TGG | 0.323792 | 4_4:-10640247 | Msa0669070:exon |
| CTCTGGAAGGGCATTGTGCC+AGG | 0.340136 | 4_4:-10642461 | Msa0669070:CDS |
| GTTGTAACTCATCTCTTTGC+TGG | 0.342438 | 4_4:-10641577 | Msa0669070:CDS |
| TCATGACGACTGTAAACTTT+TGG | 0.356748 | 4_4:+10640265 | None:intergenic |
| AGGAAGGAGTTCGAGCTCTA+TGG | 0.375783 | 4_4:-10641819 | Msa0669070:CDS |
| GAACGGTTGGAACGATTGCC+AGG | 0.382895 | 4_4:-10642502 | Msa0669070:CDS |
| ATCCTAGCCGTCCAAAATTT+GGG | 0.385337 | 4_4:+10640508 | None:intergenic |
| ACAAAGAAGTTGGTTGCATT+AGG | 0.386164 | 4_4:-10644425 | None:intergenic |
| ATAGGTTTGTACCATACCTT+TGG | 0.387579 | 4_4:-10642609 | Msa0669070:intron |
| TCCAAATCCAACCTCTCCTT+TGG | 0.400574 | 4_4:-10644232 | Msa0669070:CDS |
| CCTAAATACAAGGGTATGTT+GGG | 0.402453 | 4_4:-10642524 | Msa0669070:CDS |
| CTTCTGCATCATTGTTGCCA+TGG | 0.407471 | 4_4:-10644263 | Msa0669070:exon |
| CTTTGATCACGATGTATAGT+TGG | 0.411037 | 4_4:+10644353 | None:intergenic |
| TAGCTATGATCAAGTGAAAC+AGG | 0.413324 | 4_4:-10641740 | Msa0669070:intron |
| AATGTTTGTATGGAGGATTA+AGG | 0.415177 | 4_4:-10642427 | Msa0669070:CDS |
| TGTATGGAGGATTAAGGATT+GGG | 0.415795 | 4_4:-10642421 | Msa0669070:CDS |
| TCTTTGCTGGCCTTGGGGCA+GGG | 0.418333 | 4_4:-10641564 | Msa0669070:CDS |
| TGTATTTATAATGGATGCAT+TGG | 0.423755 | 4_4:+10639930 | None:intergenic |
| TGGTGTTTCTCAGGGACCTT+TGG | 0.427434 | 4_4:-10640550 | Msa0669070:intron |
| ACCTAAATACAAGGGTATGT+TGG | 0.436713 | 4_4:-10642525 | Msa0669070:CDS |
| ATTCTAGCTGCATTTACAAC+AGG | 0.436797 | 4_4:-10642233 | Msa0669070:intron |
| AATTTAACTACGAACGGTCT+TGG | 0.440107 | 4_4:-10640003 | Msa0669070:three_prime_UTR |
| CGTTTGAGAAATGAGAATTT+GGG | 0.442411 | 4_4:+10644314 | None:intergenic |
| ATACCATTTCTCGCTATGTT+GGG | 0.443289 | 4_4:+10641784 | None:intergenic |
| GGAGTTCGAGCTCTATGGAC+AGG | 0.453750 | 4_4:-10641814 | Msa0669070:CDS |
| CTTCAAAAGCAAGCTGTAGC+TGG | 0.458080 | 4_4:-10642563 | Msa0669070:CDS |
| TTGAAGCTGAAGCCTGACTT+TGG | 0.458651 | 4_4:+10642580 | None:intergenic |
| GGTGTTCCCAGGCGCTACTC+TGG | 0.458697 | 4_4:-10641963 | Msa0669070:CDS |
| TATGTTTCTAACCCTAGAAC+AGG | 0.463935 | 4_4:-10640472 | Msa0669070:intron |
| ACCCTTGTATTTAGGTAAAG+AGG | 0.466223 | 4_4:+10642532 | None:intergenic |
| CGAGCTCTATGGACAGGGCT+TGG | 0.466721 | 4_4:-10641808 | Msa0669070:CDS |
| CTTTGGACACCGCCAAAGTC+AGG | 0.467903 | 4_4:-10642592 | Msa0669070:CDS |
| AATACCATTTCTCGCTATGT+TGG | 0.472885 | 4_4:+10641783 | None:intergenic |
| CTGCATCGTCAATGTTTGTA+TGG | 0.475127 | 4_4:-10642437 | Msa0669070:CDS |
| CCTAGTTGGTAAAATGAAGA+AGG | 0.475185 | 4_4:+10640162 | None:intergenic |
| AACAAAATTGAACCTGATCA+AGG | 0.475691 | 4_4:+10639894 | None:intergenic |
| TTATTCGTCAATTGTGAGAC+AGG | 0.478730 | 4_4:-10641928 | Msa0669070:intron |
| GGATTTGGAATCTGCAACCA+TGG | 0.482153 | 4_4:+10644246 | None:intergenic |
| TTCGTATTGTACCTGTTCTA+GGG | 0.485604 | 4_4:+10640461 | None:intergenic |
| TTGTATGGAGGATTAAGGAT+TGG | 0.485749 | 4_4:-10642422 | Msa0669070:CDS |
| GGAACGATTGCCAGGGAAGA+AGG | 0.491235 | 4_4:-10642494 | Msa0669070:CDS |
| AAAGCACTGCTGGCGAAAGT+TGG | 0.499367 | 4_4:+10644208 | None:intergenic |
| GGTCCCAACATAGCGAGAAA+TGG | 0.500921 | 4_4:-10641787 | Msa0669070:CDS |
| GCAGGTCAAGTCGAGAATGA+TGG | 0.502235 | 4_4:-10641139 | Msa0669070:intron |
| ATTTGAAGAGAATTATTACA+TGG | 0.505186 | 4_4:+10640023 | None:intergenic |
| TCTTCAAATTTAACTACGAA+CGG | 0.505414 | 4_4:-10640009 | Msa0669070:three_prime_UTR |
| CTTACTTTGACAAGATCAGT+TGG | 0.507478 | 4_4:+10642014 | None:intergenic |
| AAGAAGGTCTTTCAGCACTC+TGG | 0.510738 | 4_4:-10642478 | Msa0669070:CDS |
| AGTTGGACCAAAGGAGAGGT+TGG | 0.513532 | 4_4:+10644225 | None:intergenic |
| TCTGGAAGGGCATTGTGCCA+GGG | 0.519541 | 4_4:-10642460 | Msa0669070:CDS |
| AATTACCTCCTGGTGTTCCC+AGG | 0.520062 | 4_4:-10641974 | Msa0669070:CDS |
| AAACATTGACGATGCAGCCC+TGG | 0.522655 | 4_4:+10642443 | None:intergenic |
| GAGTAGCGCCTGGGAACACC+AGG | 0.525220 | 4_4:+10641966 | None:intergenic |
| TGCTGAAAGACCTTCTTCCC+TGG | 0.527885 | 4_4:+10642484 | None:intergenic |
| ATGTTTGACTACATCCTAGT+TGG | 0.529100 | 4_4:+10640148 | None:intergenic |
| TTAATCATGAGACCTTGATC+AGG | 0.531178 | 4_4:-10639906 | Msa0669070:three_prime_UTR |
| CAGGTCAAGTCGAGAATGAT+GGG | 0.539474 | 4_4:-10641138 | Msa0669070:CDS |
| AAGGGTATGTTGGGAACGGT+TGG | 0.543641 | 4_4:-10642515 | Msa0669070:CDS |
| ACATGCGGAGAAAGCACTGC+TGG | 0.548559 | 4_4:+10644198 | None:intergenic |
| TCATCTCTTTGCTGGCCTTG+GGG | 0.549269 | 4_4:-10641569 | Msa0669070:CDS |
| GCTCAATCAATTTCATGGAG+TGG | 0.550017 | 4_4:-10640242 | Msa0669070:three_prime_UTR |
| AAGCTGAAGCCTGACTTTGG+CGG | 0.551365 | 4_4:+10642583 | None:intergenic |
| TTCATGGAGTGGTTTCTATG+TGG | 0.552704 | 4_4:-10640231 | Msa0669070:three_prime_UTR |
| AGGTCTTTCAGCACTCTGGA+AGG | 0.552750 | 4_4:-10642474 | Msa0669070:CDS |
| GGTCTTTCAGCACTCTGGAA+GGG | 0.557130 | 4_4:-10642473 | Msa0669070:CDS |
| CAAAGATCCAGAGTAGCGCC+TGG | 0.558547 | 4_4:+10641956 | None:intergenic |
| TTTGGCGGTGTCCAAAGGTA+TGG | 0.563038 | 4_4:+10642598 | None:intergenic |
| CAACAATGATGCAGAAGAAG+AGG | 0.568198 | 4_4:+10644269 | None:intergenic |
| ATCCTCTTTACCTAAATACA+AGG | 0.571318 | 4_4:-10642534 | Msa0669070:CDS |
| GCAGAAGGAAAATTACCTCC+TGG | 0.576611 | 4_4:-10641984 | Msa0669070:CDS |
| CTAGTTGGTAAAATGAAGAA+GGG | 0.576985 | 4_4:+10640163 | None:intergenic |
| AAAGTAAGACTTCAAGCAGA+AGG | 0.578224 | 4_4:-10641999 | Msa0669070:CDS |
| CTGACTTTGGCGGTGTCCAA+AGG | 0.581658 | 4_4:+10642593 | None:intergenic |
| TGTTACATCAACAGGTGCTG+TGG | 0.584258 | 4_4:-10642054 | Msa0669070:intron |
| TAAGACTTTCTACACGGGGA+AGG | 0.585668 | 4_4:-10642288 | Msa0669070:CDS |
| AGAAGTTGGTTGCATTAGGA+CGG | 0.587266 | 4_4:-10644421 | None:intergenic |
| TATTGGCTCCCCAGTTGATG+TGG | 0.597518 | 4_4:-10641527 | Msa0669070:intron |
| CATCGTCAATGTTTGTATGG+AGG | 0.599547 | 4_4:-10642434 | Msa0669070:CDS |
| CAGGTTAAGACTTTCTACAC+GGG | 0.605066 | 4_4:-10642293 | Msa0669070:CDS |
| AATGATGCAGAAGAAGAGGA+AGG | 0.622071 | 4_4:+10644273 | None:intergenic |
| ATACAAGGGTATGTTGGGAA+CGG | 0.626891 | 4_4:-10642519 | Msa0669070:CDS |
| AAAGATCCAGAGTAGCGCCT+GGG | 0.631215 | 4_4:+10641957 | None:intergenic |
| GCTGGCGAAAGTTGGACCAA+AGG | 0.635657 | 4_4:+10644216 | None:intergenic |
| GAGTTCGAGCTCTATGGACA+GGG | 0.636887 | 4_4:-10641813 | Msa0669070:CDS |
| ACAGTGGAACATCGCCCACA+TGG | 0.638880 | 4_4:+10642264 | None:intergenic |
| AATCCTTTATAAAACGCCAA+AGG | 0.640143 | 4_4:+10640534 | None:intergenic |
| AACGGTTGGAACGATTGCCA+GGG | 0.640772 | 4_4:-10642501 | Msa0669070:CDS |
| AAGAAGAGGAAGGAATCGAA+AGG | 0.645871 | 4_4:+10644283 | None:intergenic |
| CGAAAGTTGGACCAAAGGAG+AGG | 0.649225 | 4_4:+10644221 | None:intergenic |
| TTTCTCCGCATGTTTCGCTG+AGG | 0.650743 | 4_4:-10644188 | Msa0669070:intron |
| ACAGGTTAAGACTTTCTACA+CGG | 0.651442 | 4_4:-10642294 | Msa0669070:intron |
| TCCTCTTTACCTAAATACAA+GGG | 0.668803 | 4_4:-10642533 | Msa0669070:CDS |
| ACAACATTGTCAGTGAACCC+CGG | 0.669074 | 4_4:+10641595 | None:intergenic |
| TAGCGCCTGGGAACACCAGG+AGG | 0.682089 | 4_4:+10641969 | None:intergenic |
| CTACACGGGGAAGGACCATG+TGG | 0.686360 | 4_4:-10642279 | Msa0669070:CDS |
| GATTACCTCAGCGAAACATG+CGG | 0.692366 | 4_4:+10644183 | None:intergenic |
| AGGTGCTGTGGCAATTATGG+TGG | 0.697754 | 4_4:-10642042 | Msa0669070:CDS |
| CTAGCCGTCCAAAATTTGGG+AGG | 0.698037 | 4_4:+10640511 | None:intergenic |
| TACACGGGGAAGGACCATGT+GGG | 0.703680 | 4_4:-10642278 | Msa0669070:CDS |
| AGGTTAAGACTTTCTACACG+GGG | 0.711418 | 4_4:-10642292 | Msa0669070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAAATAAAATAAA+AGG | + | chr4_4:10643662-10643681 | None:intergenic | 0.0% |
| !!! | TTATTTTATTTTATTTTTTT+CGG | - | chr4_4:10643663-10643682 | Msa0669070:intron | 0.0% |
| !!! | TAAAAAAGTTCAAATTTTAT+AGG | - | chr4_4:10640730-10640749 | Msa0669070:intron | 10.0% |
| !!! | AAAAAAGTTCAAATTTTATA+GGG | - | chr4_4:10640731-10640750 | Msa0669070:intron | 10.0% |
| !! | ATGATTAAATGTATTTATAA+TGG | + | chr4_4:10644371-10644390 | None:intergenic | 10.0% |
| !! | TAAAGCAATGTAAATAATAA+TGG | + | chr4_4:10640177-10640196 | None:intergenic | 15.0% |
| !! | ATAATGTTTGTTTATTCAAA+AGG | - | chr4_4:10640326-10640345 | Msa0669070:intron | 15.0% |
| !! | TAATGTTTGTTTATTCAAAA+GGG | - | chr4_4:10640327-10640346 | Msa0669070:intron | 15.0% |
| !!! | GTTATTTTTTAACCAAAAAT+TGG | + | chr4_4:10640529-10640548 | None:intergenic | 15.0% |
| !!! | TTTTGTAGTTTTTTTTCTTA+GGG | - | chr4_4:10640645-10640664 | Msa0669070:intron | 15.0% |
| !!! | GAACTTTTTTATTTTGTTTT+TGG | + | chr4_4:10640721-10640740 | None:intergenic | 15.0% |
| !!! | ATTTATTACTGATTACTTTT+TGG | - | chr4_4:10641555-10641574 | Msa0669070:CDS | 15.0% |
| !!! | TTTATTACTGATTACTTTTT+GGG | - | chr4_4:10641556-10641575 | Msa0669070:CDS | 15.0% |
| !!! | TTGAATCTATTTTAATATGT+TGG | - | chr4_4:10642140-10642159 | Msa0669070:intron | 15.0% |
| !!! | TGAATCTATTTTAATATGTT+GGG | - | chr4_4:10642141-10642160 | Msa0669070:intron | 15.0% |
| !! | TACAATTAGATATGTTAAAA+CGG | + | chr4_4:10643398-10643417 | None:intergenic | 15.0% |
| !! | TTAACATATCTAATTGTATT+TGG | - | chr4_4:10643400-10643419 | Msa0669070:intron | 15.0% |
| !!! | CAAGATACAATTTTTTTTAA+AGG | + | chr4_4:10643597-10643616 | None:intergenic | 15.0% |
| !! | TAAAAAAAATTGTATCTTGT+TGG | - | chr4_4:10643598-10643617 | Msa0669070:intron | 15.0% |
| !!! | TTTATTTTATTTTTTTCGGT+TGG | - | chr4_4:10643667-10643686 | Msa0669070:intron | 15.0% |
| !!! | TTATTTACATTGCTTTATTG+TGG | - | chr4_4:10640180-10640199 | Msa0669070:three_prime_UTR | 20.0% |
| !!! | GTTTTGTAGTTTTTTTTCTT+AGG | - | chr4_4:10640644-10640663 | Msa0669070:intron | 20.0% |
| !!! | TTTGTAGTTTTTTTTCTTAG+GGG | - | chr4_4:10640646-10640665 | Msa0669070:intron | 20.0% |
| !! | TAATTACAACTATAAACCAA+AGG | + | chr4_4:10640877-10640896 | None:intergenic | 20.0% |
| !! | TTATAGTTGTAATTAGTCAA+TGG | - | chr4_4:10640882-10640901 | Msa0669070:intron | 20.0% |
| !!! | GTTTGTTGTTTCAAATATTT+AGG | - | chr4_4:10640981-10641000 | Msa0669070:intron | 20.0% |
| !! | AGTTTAAAAATAGATTGGAA+AGG | + | chr4_4:10641252-10641271 | None:intergenic | 20.0% |
| !! | AACAAAATTCGACATATTTA+AGG | + | chr4_4:10641494-10641513 | None:intergenic | 20.0% |
| !!! | TTACTGTTTCATTTTCATAT+TGG | - | chr4_4:10643043-10643062 | Msa0669070:intron | 20.0% |
| !!! | TACTGTTTCATTTTCATATT+GGG | - | chr4_4:10643044-10643063 | Msa0669070:intron | 20.0% |
| !! | AAAACATACATCATTCTTTA+AGG | + | chr4_4:10643218-10643237 | None:intergenic | 20.0% |
| !! | TTAACCTTAATCATCATATT+TGG | - | chr4_4:10643309-10643328 | Msa0669070:intron | 20.0% |
| !! | AAAACCAAATATGATGATTA+AGG | + | chr4_4:10643316-10643335 | None:intergenic | 20.0% |
| !!! | TTAATCATCATATTTGGTTT+TGG | - | chr4_4:10643315-10643334 | Msa0669070:intron | 20.0% |
| !!! | TTTTTAAAGGCAAATATTAG+TGG | + | chr4_4:10643541-10643560 | None:intergenic | 20.0% |
| !!! | GTTAAAGGAAAGTTTTTTAA+AGG | + | chr4_4:10643554-10643573 | None:intergenic | 20.0% |
| !!! | TTTTTAAAGGCAAATATTAG+TGG | + | chr4_4:10643541-10643560 | None:intergenic | 20.0% |
| !! | ATTTGAAGAGAATTATTACA+TGG | + | chr4_4:10644269-10644288 | None:intergenic | 20.0% |
| ! | CTTATATCTAACAAACACTA+GGG | + | chr4_4:10640381-10640400 | None:intergenic | 25.0% |
| !! | CTAGTGTTTGTTAGATATAA+GGG | - | chr4_4:10640380-10640399 | Msa0669070:intron | 25.0% |
| ! | TTTGGTTAAAAAATAACACG+TGG | - | chr4_4:10640532-10640551 | Msa0669070:CDS | 25.0% |
| !!! | TTGTAGTTTTTTTTCTTAGG+GGG | - | chr4_4:10640647-10640666 | Msa0669070:intron | 25.0% |
| !!! | CTTGTGAATTAAGCTTTATT+TGG | - | chr4_4:10640803-10640822 | Msa0669070:intron | 25.0% |
| ! | TAAACCAAAGGTAAAAATAG+TGG | + | chr4_4:10640865-10640884 | None:intergenic | 25.0% |
| !!! | TGTTGTTTCAAATATTTAGG+TGG | - | chr4_4:10640984-10641003 | Msa0669070:intron | 25.0% |
| !! | TTCAAATATTTAGGTGGATT+AGG | - | chr4_4:10640990-10641009 | Msa0669070:intron | 25.0% |
| ! | TCAGGAGTTTAAAAATAGAT+TGG | + | chr4_4:10641257-10641276 | None:intergenic | 25.0% |
| !!! | TATTTTTAAACTCCTGAAGA+AGG | - | chr4_4:10641260-10641279 | Msa0669070:intron | 25.0% |
| !!! | ACATGCAGATATAGTTTTAT+TGG | - | chr4_4:10641358-10641377 | Msa0669070:intron | 25.0% |
| !!! | TTTTATTGGTTGAACTTTGT+TGG | - | chr4_4:10641372-10641391 | Msa0669070:intron | 25.0% |
| ! | TTATTTATCTGTGAATAGCA+TGG | - | chr4_4:10641966-10641985 | Msa0669070:CDS | 25.0% |
| ! | AGAAAACACAAATACATGTT+AGG | + | chr4_4:10642181-10642200 | None:intergenic | 25.0% |
| ! | TCTCTTTCATAAATCATGTT+AGG | + | chr4_4:10642400-10642419 | None:intergenic | 25.0% |
| ! | CAGGTAATTTATAGTATTAC+TGG | - | chr4_4:10642568-10642587 | Msa0669070:CDS | 25.0% |
| ! | TAAAAATTACCACATCAACT+GGG | + | chr4_4:10642774-10642793 | None:intergenic | 25.0% |
| ! | TTAAAAATTACCACATCAAC+TGG | + | chr4_4:10642775-10642794 | None:intergenic | 25.0% |
| ! | CTACATAGACATTATTAACT+TGG | - | chr4_4:10642802-10642821 | Msa0669070:intron | 25.0% |
| ! | ATCTAATCATGGTTTGATTA+GGG | + | chr4_4:10642887-10642906 | None:intergenic | 25.0% |
| ! | TATCTAATCATGGTTTGATT+AGG | + | chr4_4:10642888-10642907 | None:intergenic | 25.0% |
| ! | GAACAGAATTATTAGTAGAA+AGG | + | chr4_4:10643109-10643128 | None:intergenic | 25.0% |
| ! | AGAACATCAATCATCATATT+TGG | - | chr4_4:10643266-10643285 | Msa0669070:intron | 25.0% |
| !!! | TCAATCATCATATTTGGTTT+TGG | - | chr4_4:10643272-10643291 | Msa0669070:intron | 25.0% |
| ! | TTTATGCATCTTAACAGAAA+AGG | + | chr4_4:10643365-10643384 | None:intergenic | 25.0% |
| !!! | TGAAAGATGTTTTAAGAATG+AGG | - | chr4_4:10643461-10643480 | Msa0669070:intron | 25.0% |
| !!! | GTTTCTCTTCTTTGTTATTT+CGG | - | chr4_4:10643862-10643881 | Msa0669070:intron | 25.0% |
| !!! | AATGCATTTTTTGGAGTATA+TGG | + | chr4_4:10643906-10643925 | None:intergenic | 25.0% |
| !! | ATACTCCAAAAAATGCATTT+TGG | - | chr4_4:10643907-10643926 | Msa0669070:intron | 25.0% |
| !! | TACTCCAAAAAATGCATTTT+GGG | - | chr4_4:10643908-10643927 | Msa0669070:intron | 25.0% |
| !!! | TAGTCAAACATTTTTTACAG+AGG | - | chr4_4:10644153-10644172 | Msa0669070:intron | 25.0% |
| ! | TCTTCAAATTTAACTACGAA+CGG | - | chr4_4:10644280-10644299 | Msa0669070:five_prime_UTR | 25.0% |
| !!! | GATTCTTTTCAAATTTGTTG+TGG | - | chr4_4:10644323-10644342 | Msa0669070:five_prime_UTR | 25.0% |
| !!! | TGTATTTATAATGGATGCAT+TGG | + | chr4_4:10644362-10644381 | None:intergenic | 25.0% |
| ! | AATTTTCTTATGCAGCGATT+AGG | + | chr4_4:10639896-10639915 | None:intergenic | 30.0% |
| CGTTTGAGAAATGAGAATTT+GGG | + | chr4_4:10639978-10639997 | None:intergenic | 30.0% | |
| !! | TTGCTTTATTGTGGTTTTCA+TGG | - | chr4_4:10640189-10640208 | Msa0669070:three_prime_UTR | 30.0% |
| ! | TGATCAAGTGAACAATTTTG+TGG | - | chr4_4:10640292-10640311 | Msa0669070:intron | 30.0% |
| ! | AAAAGGGTTAACCTCAATTT+TGG | - | chr4_4:10640343-10640362 | Msa0669070:intron | 30.0% |
| ! | AAAGGGTTAACCTCAATTTT+GGG | - | chr4_4:10640344-10640363 | Msa0669070:intron | 30.0% |
| CCTTATATCTAACAAACACT+AGG | + | chr4_4:10640382-10640401 | None:intergenic | 30.0% | |
| ! | CCTAGTGTTTGTTAGATATA+AGG | - | chr4_4:10640379-10640398 | Msa0669070:intron | 30.0% |
| ! | TGTGATTTGTAGTGACTTAA+AGG | - | chr4_4:10640430-10640449 | Msa0669070:intron | 30.0% |
| !! | TTTTAACCAAAAATTGGCCT+TGG | + | chr4_4:10640523-10640542 | None:intergenic | 30.0% |
| ACCAAGTTAAAATTGGCATT+GGG | - | chr4_4:10640585-10640604 | Msa0669070:intron | 30.0% | |
| !!! | TACTCCACTATTTTTACCTT+TGG | - | chr4_4:10640858-10640877 | Msa0669070:intron | 30.0% |
| TAGTTGTAATTAGTCAATGG+TGG | - | chr4_4:10640885-10640904 | Msa0669070:intron | 30.0% | |
| ! | AGGATTGTACTTTTCAATTC+AGG | - | chr4_4:10640956-10640975 | Msa0669070:intron | 30.0% |
| ! | GTTTTCTTTTCCATCATTGT+TGG | - | chr4_4:10641014-10641033 | Msa0669070:intron | 30.0% |
| ACATGTTGGAGTTAAATTGT+GGG | - | chr4_4:10641047-10641066 | Msa0669070:intron | 30.0% | |
| ! | ATGGATTGTAATGATCTGTA+TGG | - | chr4_4:10641084-10641103 | Msa0669070:CDS | 30.0% |
| ATTGTAATGATCTGTATGGA+TGG | - | chr4_4:10641088-10641107 | Msa0669070:CDS | 30.0% | |
| !!! | GATGGTATAGGATGTTTTTT+TGG | - | chr4_4:10641106-10641125 | Msa0669070:CDS | 30.0% |
| !!! | TAGGATGTTTTTTTGGTGAA+TGG | - | chr4_4:10641113-10641132 | Msa0669070:CDS | 30.0% |
| ! | CTTTGATAATCTTCCGAATA+GGG | + | chr4_4:10641170-10641189 | None:intergenic | 30.0% |
| CTATTCGGAAGATTATCAAA+GGG | - | chr4_4:10641169-10641188 | Msa0669070:intron | 30.0% | |
| AGATTATCAAAGGGACAAAA+TGG | - | chr4_4:10641178-10641197 | Msa0669070:intron | 30.0% | |
| TTTGGATGATAGGAAATGAA+GGG | + | chr4_4:10641321-10641340 | None:intergenic | 30.0% | |
| ATTTGGATGATAGGAAATGA+AGG | + | chr4_4:10641322-10641341 | None:intergenic | 30.0% | |
| TGCATAATTGCATACGTATT+TGG | + | chr4_4:10641339-10641358 | None:intergenic | 30.0% | |
| ATCCTCTTTACCTAAATACA+AGG | - | chr4_4:10641755-10641774 | Msa0669070:CDS | 30.0% | |
| TCCTCTTTACCTAAATACAA+GGG | - | chr4_4:10641756-10641775 | Msa0669070:CDS | 30.0% | |
| AATGTTTGTATGGAGGATTA+AGG | - | chr4_4:10641862-10641881 | Msa0669070:intron | 30.0% | |
| GTAACAAATTGAAGAGTTGT+AGG | + | chr4_4:10642221-10642240 | None:intergenic | 30.0% | |
| !! | CTTCAATTTGTTACATCAAC+AGG | - | chr4_4:10642227-10642246 | Msa0669070:intron | 30.0% |
| AAAATCTGCATTTACAACTC+AGG | - | chr4_4:10642450-10642469 | Msa0669070:CDS | 30.0% | |
| ! | AGTATTCGTTTTGTAGACAA+TGG | - | chr4_4:10642618-10642637 | Msa0669070:intron | 30.0% |
| !! | GCAGACTATTTTGAAAATTC+CGG | - | chr4_4:10642675-10642694 | Msa0669070:intron | 30.0% |
| !! | CAGACTATTTTGAAAATTCC+GGG | - | chr4_4:10642676-10642695 | Msa0669070:intron | 30.0% |
| !! | AGACTATTTTGAAAATTCCG+GGG | - | chr4_4:10642677-10642696 | Msa0669070:intron | 30.0% |
| AAAAATTACCACATCAACTG+GGG | + | chr4_4:10642773-10642792 | None:intergenic | 30.0% | |
| TCTAATCATGGTTTGATTAG+GGG | + | chr4_4:10642886-10642905 | None:intergenic | 30.0% | |
| TACCATTGTGTAATCATTCT+GGG | + | chr4_4:10642916-10642935 | None:intergenic | 30.0% | |
| ! | ATTCTGTTCTATCTTCCTTT+TGG | - | chr4_4:10643120-10643139 | Msa0669070:intron | 30.0% |
| !! | GGTTTTAACAAAGCAATCAA+GGG | + | chr4_4:10643197-10643216 | None:intergenic | 30.0% |
| !! | AGGTTTTAACAAAGCAATCA+AGG | + | chr4_4:10643198-10643217 | None:intergenic | 30.0% |
| ATGATTGATGTTCTTAACAG+AGG | + | chr4_4:10643260-10643279 | None:intergenic | 30.0% | |
| ATTAGTGGTAAGTCTGTTAA+AGG | + | chr4_4:10643526-10643545 | None:intergenic | 30.0% | |
| !! | ATTAGTGGTTAGTCTGTTAA+AGG | + | chr4_4:10643569-10643588 | None:intergenic | 30.0% |
| TGTCCTTTATCATTACTGAT+TGG | - | chr4_4:10643706-10643725 | Msa0669070:intron | 30.0% | |
| AATCCTTTATAAAACGCCAA+AGG | + | chr4_4:10643758-10643777 | None:intergenic | 30.0% | |
| !! | CTAGTTGGTAAAATGAAGAA+GGG | + | chr4_4:10644129-10644148 | None:intergenic | 30.0% |
| ! | ACAATTGCAATCTCTTTTGT+AGG | - | chr4_4:10644229-10644248 | Msa0669070:CDS | 30.0% |
| AACAAAATTGAACCTGATCA+AGG | + | chr4_4:10644398-10644417 | None:intergenic | 30.0% | |
| CTTTGATCACGATGTATAGT+TGG | + | chr4_4:10639939-10639958 | None:intergenic | 35.0% | |
| GCGTTTGAGAAATGAGAATT+TGG | + | chr4_4:10639979-10639998 | None:intergenic | 35.0% | |
| GTGTTTGATTCCCAAAATTG+AGG | + | chr4_4:10640357-10640376 | None:intergenic | 35.0% | |
| TGTTAGATATAAGGGATGTG+AGG | - | chr4_4:10640388-10640407 | Msa0669070:intron | 35.0% | |
| GTTAGATATAAGGGATGTGA+GGG | - | chr4_4:10640389-10640408 | Msa0669070:intron | 35.0% | |
| TGCTACAGTTGCAAAACTTA+GGG | + | chr4_4:10640489-10640508 | None:intergenic | 35.0% | |
| ! | TTTTGCAACTGTAGCAGTTT+TGG | - | chr4_4:10640493-10640512 | Msa0669070:CDS | 35.0% |
| AGCGTAGACCAAGTTAAAAT+TGG | - | chr4_4:10640578-10640597 | Msa0669070:intron | 35.0% | |
| GACCAAGTTAAAATTGGCAT+TGG | - | chr4_4:10640584-10640603 | Msa0669070:intron | 35.0% | |
| CCAAGTTAAAATTGGCATTG+GGG | - | chr4_4:10640586-10640605 | Msa0669070:intron | 35.0% | |
| ! | CAAGTTAAAATTGGCATTGG+GGG | - | chr4_4:10640587-10640606 | Msa0669070:intron | 35.0% |
| ! | AAATAGTGGAGTAATGTGTC+TGG | + | chr4_4:10640851-10640870 | None:intergenic | 35.0% |
| ! | GTCTGGTTTGATGAAATGAA+AGG | - | chr4_4:10640936-10640955 | Msa0669070:intron | 35.0% |
| GCAATACAAACCAACAATGA+TGG | + | chr4_4:10641027-10641046 | None:intergenic | 35.0% | |
| !! | TTGGTTTGTATTGCACATGT+TGG | - | chr4_4:10641033-10641052 | Msa0669070:intron | 35.0% |
| CACATGTTGGAGTTAAATTG+TGG | - | chr4_4:10641046-10641065 | Msa0669070:intron | 35.0% | |
| ATGATCTGTATGGATGGTAT+AGG | - | chr4_4:10641094-10641113 | Msa0669070:CDS | 35.0% | |
| !!! | GATGTTTTTTTGGTGAATGG+AGG | - | chr4_4:10641116-10641135 | Msa0669070:CDS | 35.0% |
| TAGTTATCGTTCACCCTATT+CGG | - | chr4_4:10641154-10641173 | Msa0669070:intron | 35.0% | |
| ! | CCTTTGATAATCTTCCGAAT+AGG | + | chr4_4:10641171-10641190 | None:intergenic | 35.0% |
| CCTATTCGGAAGATTATCAA+AGG | - | chr4_4:10641168-10641187 | Msa0669070:intron | 35.0% | |
| TAAAGGGAATGAATGGAAAC+GGG | + | chr4_4:10641293-10641312 | None:intergenic | 35.0% | |
| GTAAAGGGAATGAATGGAAA+CGG | + | chr4_4:10641294-10641313 | None:intergenic | 35.0% | |
| GAAATGAAGGGGAATGTAAA+GGG | + | chr4_4:10641309-10641328 | None:intergenic | 35.0% | |
| TTGGATGATAGGAAATGAAG+GGG | + | chr4_4:10641320-10641339 | None:intergenic | 35.0% | |
| TGCATACGTATTTGGATGAT+AGG | + | chr4_4:10641331-10641350 | None:intergenic | 35.0% | |
| ! | TGAAAACAGCTTTTGCATTG+TGG | - | chr4_4:10641445-10641464 | Msa0669070:intron | 35.0% |
| GACGTTCTTGTGATTGATAT+AGG | - | chr4_4:10641662-10641681 | Msa0669070:intron | 35.0% | |
| ATAGGTTTGTACCATACCTT+TGG | - | chr4_4:10641680-10641699 | Msa0669070:intron | 35.0% | |
| ACCCTTGTATTTAGGTAAAG+AGG | + | chr4_4:10641760-10641779 | None:intergenic | 35.0% | |
| ! | ACCTAAATACAAGGGTATGT+TGG | - | chr4_4:10641764-10641783 | Msa0669070:CDS | 35.0% |
| ! | CCTAAATACAAGGGTATGTT+GGG | - | chr4_4:10641765-10641784 | Msa0669070:CDS | 35.0% |
| TTGTATGGAGGATTAAGGAT+TGG | - | chr4_4:10641867-10641886 | Msa0669070:intron | 35.0% | |
| TGTATGGAGGATTAAGGATT+GGG | - | chr4_4:10641868-10641887 | Msa0669070:intron | 35.0% | |
| AACAAAGATTCGAATCTCAC+AGG | + | chr4_4:10641903-10641922 | None:intergenic | 35.0% | |
| TGAATAGCATGGTGATTAAC+AGG | - | chr4_4:10641977-10641996 | Msa0669070:CDS | 35.0% | |
| ACAGGTTAAGACTTTCTACA+CGG | - | chr4_4:10641995-10642014 | Msa0669070:CDS | 35.0% | |
| ! | GCTAGAATTTTCTTTGACAG+TGG | + | chr4_4:10642044-10642063 | None:intergenic | 35.0% |
| ! | ATTCTAGCTGCATTTACAAC+AGG | - | chr4_4:10642056-10642075 | Msa0669070:intron | 35.0% |
| ! | TCAATTCTGGAAGTTGTTGT+GGG | - | chr4_4:10642085-10642104 | Msa0669070:intron | 35.0% |
| TAGATTCAAATCAGAGCACA+CGG | + | chr4_4:10642129-10642148 | None:intergenic | 35.0% | |
| CTTACTTTGACAAGATCAGT+TGG | + | chr4_4:10642278-10642297 | None:intergenic | 35.0% | |
| AAAGTAAGACTTCAAGCAGA+AGG | - | chr4_4:10642290-10642309 | Msa0669070:CDS | 35.0% | |
| TTATTCGTCAATTGTGAGAC+AGG | - | chr4_4:10642361-10642380 | Msa0669070:intron | 35.0% | |
| ATACCATTTCTCGCTATGTT+GGG | + | chr4_4:10642508-10642527 | None:intergenic | 35.0% | |
| AATACCATTTCTCGCTATGT+TGG | + | chr4_4:10642509-10642528 | None:intergenic | 35.0% | |
| TAGCTATGATCAAGTGAAAC+AGG | - | chr4_4:10642549-10642568 | Msa0669070:CDS | 35.0% | |
| CTAATCATGGTTTGATTAGG+GGG | + | chr4_4:10642885-10642904 | None:intergenic | 35.0% | |
| CTGGGATTCTTATCTAATCA+TGG | + | chr4_4:10642898-10642917 | None:intergenic | 35.0% | |
| ATCCCAGAATGATTACACAA+TGG | - | chr4_4:10642911-10642930 | Msa0669070:intron | 35.0% | |
| CTACCATTGTGTAATCATTC+TGG | + | chr4_4:10642917-10642936 | None:intergenic | 35.0% | |
| GATCTCTTTATGGTCCATTA+AGG | - | chr4_4:10642997-10643016 | Msa0669070:intron | 35.0% | |
| ACAGAGGAAAATAGTAACAG+TGG | + | chr4_4:10643244-10643263 | None:intergenic | 35.0% | |
| !!! | ATGTTTTAAGAATGAGGTCC+AGG | - | chr4_4:10643467-10643486 | Msa0669070:intron | 35.0% |
| !!! | TGTTTTAAGAATGAGGTCCA+GGG | - | chr4_4:10643468-10643487 | Msa0669070:intron | 35.0% |
| GGTAAGTCTGTTAAAGGAAA+GGG | + | chr4_4:10643520-10643539 | None:intergenic | 35.0% | |
| TGGTAAGTCTGTTAAAGGAA+AGG | + | chr4_4:10643521-10643540 | None:intergenic | 35.0% | |
| GTATAATACACAAGCTTAGC+AGG | - | chr4_4:10643620-10643639 | Msa0669070:intron | 35.0% | |
| !! | TTCGGTTGGTTTACATTCAA+AGG | - | chr4_4:10643681-10643700 | Msa0669070:intron | 35.0% |
| !! | TCGGTTGGTTTACATTCAAA+GGG | - | chr4_4:10643682-10643701 | Msa0669070:intron | 35.0% |
| CAGCCAATCAGTAATGATAA+AGG | + | chr4_4:10643712-10643731 | None:intergenic | 35.0% | |
| ! | TACTGATTGGCTGTGTAATT+TGG | - | chr4_4:10643719-10643738 | Msa0669070:intron | 35.0% |
| !! | TGTGTAATTTGGTGTTTCTC+AGG | - | chr4_4:10643730-10643749 | Msa0669070:intron | 35.0% |
| !! | GTGTAATTTGGTGTTTCTCA+GGG | - | chr4_4:10643731-10643750 | Msa0669070:intron | 35.0% |
| ! | AAAGGATTCCTCCCAAATTT+TGG | - | chr4_4:10643770-10643789 | Msa0669070:intron | 35.0% |
| ! | TATGTTTCTAACCCTAGAAC+AGG | - | chr4_4:10643817-10643836 | Msa0669070:intron | 35.0% |
| TTCGTATTGTACCTGTTCTA+GGG | + | chr4_4:10643831-10643850 | None:intergenic | 35.0% | |
| ATTCGTATTGTACCTGTTCT+AGG | + | chr4_4:10643832-10643851 | None:intergenic | 35.0% | |
| !!! | CAGACCCAAAATGCATTTTT+TGG | + | chr4_4:10643915-10643934 | None:intergenic | 35.0% |
| !! | AAATGCATTTTGGGTCTGTT+TGG | - | chr4_4:10643917-10643936 | Msa0669070:intron | 35.0% |
| !! | AATGCATTTTGGGTCTGTTT+GGG | - | chr4_4:10643918-10643937 | Msa0669070:intron | 35.0% |
| ! | TCATGACGACTGTAAACTTT+TGG | + | chr4_4:10644027-10644046 | None:intergenic | 35.0% |
| CATGAGCTCAATCAATTTCA+TGG | - | chr4_4:10644042-10644061 | Msa0669070:intron | 35.0% | |
| !! | CCTAGTTGGTAAAATGAAGA+AGG | + | chr4_4:10644130-10644149 | None:intergenic | 35.0% |
| ! | CCTTCTTCATTTTACCAACT+AGG | - | chr4_4:10644127-10644146 | Msa0669070:intron | 35.0% |
| ATGTTTGACTACATCCTAGT+TGG | + | chr4_4:10644144-10644163 | None:intergenic | 35.0% | |
| AATTTAACTACGAACGGTCT+TGG | - | chr4_4:10644286-10644305 | Msa0669070:five_prime_UTR | 35.0% | |
| TTAATCATGAGACCTTGATC+AGG | - | chr4_4:10644383-10644402 | Msa0669070:five_prime_UTR | 35.0% | |
| AAGAAGAGGAAGGAATCGAA+AGG | + | chr4_4:10640009-10640028 | None:intergenic | 40.0% | |
| AATGATGCAGAAGAAGAGGA+AGG | + | chr4_4:10640019-10640038 | None:intergenic | 40.0% | |
| CAACAATGATGCAGAAGAAG+AGG | + | chr4_4:10640023-10640042 | None:intergenic | 40.0% | |
| CTACAGTTGCAAAACTTAGG+GGG | + | chr4_4:10640487-10640506 | None:intergenic | 40.0% | |
| GCTACAGTTGCAAAACTTAG+GGG | + | chr4_4:10640488-10640507 | None:intergenic | 40.0% | |
| CTGCTACAGTTGCAAAACTT+AGG | + | chr4_4:10640490-10640509 | None:intergenic | 40.0% | |
| !! | AACCAAAAATTGGCCTTGGT+GGG | + | chr4_4:10640519-10640538 | None:intergenic | 40.0% |
| !! | TAACCAAAAATTGGCCTTGG+TGG | + | chr4_4:10640520-10640539 | None:intergenic | 40.0% |
| !!! | CCCCAATGCCAATTTTAACT+TGG | + | chr4_4:10640589-10640608 | None:intergenic | 40.0% |
| ! | CTTTCCCAAAGTTGCGATTT+TGG | + | chr4_4:10640673-10640692 | None:intergenic | 40.0% |
| ! | TCGCAACTTTGGGAAAGTTA+AGG | - | chr4_4:10640676-10640695 | Msa0669070:intron | 40.0% |
| ! | CGCAACTTTGGGAAAGTTAA+GGG | - | chr4_4:10640677-10640696 | Msa0669070:intron | 40.0% |
| ! | GCAACTTTGGGAAAGTTAAG+GGG | - | chr4_4:10640678-10640697 | Msa0669070:intron | 40.0% |
| GTGGGACAAAATGTTTGACA+TGG | - | chr4_4:10641065-10641084 | Msa0669070:intron | 40.0% | |
| !! | TTTTTGGTGAATGGAGGAGA+AGG | - | chr4_4:10641122-10641141 | Msa0669070:CDS | 40.0% |
| AAAGGGAATGAATGGAAACG+GGG | + | chr4_4:10641292-10641311 | None:intergenic | 40.0% | |
| GGGAATGTAAAGGGAATGAA+TGG | + | chr4_4:10641300-10641319 | None:intergenic | 40.0% | |
| GGAAATGAAGGGGAATGTAA+AGG | + | chr4_4:10641310-10641329 | None:intergenic | 40.0% | |
| ! | AACAGCTTTTGCATTGTGGT+TGG | - | chr4_4:10641449-10641468 | Msa0669070:intron | 40.0% |
| TGTTCCTGAGTTGCTATCAA+TGG | - | chr4_4:10641510-10641529 | Msa0669070:intron | 40.0% | |
| ! | ATCTCCATTGATAGCAACTC+AGG | + | chr4_4:10641517-10641536 | None:intergenic | 40.0% |
| CCCAACATACCCTTGTATTT+AGG | + | chr4_4:10641768-10641787 | None:intergenic | 40.0% | |
| ! | ATACAAGGGTATGTTGGGAA+CGG | - | chr4_4:10641770-10641789 | Msa0669070:CDS | 40.0% |
| CTGCATCGTCAATGTTTGTA+TGG | - | chr4_4:10641852-10641871 | Msa0669070:intron | 40.0% | |
| CATCGTCAATGTTTGTATGG+AGG | - | chr4_4:10641855-10641874 | Msa0669070:intron | 40.0% | |
| CAGGTTAAGACTTTCTACAC+GGG | - | chr4_4:10641996-10642015 | Msa0669070:CDS | 40.0% | |
| AGGTTAAGACTTTCTACACG+GGG | - | chr4_4:10641997-10642016 | Msa0669070:CDS | 40.0% | |
| CAACAGGTATAGCTCAATTC+TGG | - | chr4_4:10642072-10642091 | Msa0669070:intron | 40.0% | |
| ! | CTCAATTCTGGAAGTTGTTG+TGG | - | chr4_4:10642084-10642103 | Msa0669070:intron | 40.0% |
| AGTTGTAGGCAGTAGTATCA+AGG | + | chr4_4:10642207-10642226 | None:intergenic | 40.0% | |
| TCTGCATTTACAACTCAGGA+AGG | - | chr4_4:10642454-10642473 | Msa0669070:CDS | 40.0% | |
| GTTGTAACTCATCTCTTTGC+TGG | - | chr4_4:10642712-10642731 | Msa0669070:intron | 40.0% | |
| GACAACAGCTGATCTCTTTA+TGG | - | chr4_4:10642987-10643006 | Msa0669070:intron | 40.0% | |
| CTCTTTATGGTCCATTAAGG+CGG | - | chr4_4:10643000-10643019 | Msa0669070:intron | 40.0% | |
| TCTTTATGGTCCATTAAGGC+GGG | - | chr4_4:10643001-10643020 | Msa0669070:intron | 40.0% | |
| TATATACATCCCCGCCTTAA+TGG | + | chr4_4:10643014-10643033 | None:intergenic | 40.0% | |
| ! | CTTCCTTTTGGTGAATATGC+AGG | - | chr4_4:10643132-10643151 | Msa0669070:intron | 40.0% |
| TGACCTGCATATTCACCAAA+AGG | + | chr4_4:10643138-10643157 | None:intergenic | 40.0% | |
| !!! | GTTTTAAGAATGAGGTCCAG+GGG | - | chr4_4:10643469-10643488 | Msa0669070:intron | 40.0% |
| ! | GGACCTTTGGCGTTTTATAA+AGG | - | chr4_4:10643752-10643771 | Msa0669070:intron | 40.0% |
| ! | GATTCCTCCCAAATTTTGGA+CGG | - | chr4_4:10643774-10643793 | Msa0669070:intron | 40.0% |
| ATCCTAGCCGTCCAAAATTT+GGG | + | chr4_4:10643784-10643803 | None:intergenic | 40.0% | |
| GCTCAATCAATTTCATGGAG+TGG | - | chr4_4:10644047-10644066 | Msa0669070:intron | 40.0% | |
| TTCATGGAGTGGTTTCTATG+TGG | - | chr4_4:10644058-10644077 | Msa0669070:intron | 40.0% | |
| CTTCTGCATCATTGTTGCCA+TGG | - | chr4_4:10640026-10640045 | Msa0669070:three_prime_UTR | 45.0% | |
| ! | GGATTTGGAATCTGCAACCA+TGG | + | chr4_4:10640046-10640065 | None:intergenic | 45.0% |
| TCCAAATCCAACCTCTCCTT+TGG | - | chr4_4:10640057-10640076 | Msa0669070:three_prime_UTR | 45.0% | |
| ACCAAAGGAGAGGTTGGATT+TGG | + | chr4_4:10640061-10640080 | None:intergenic | 45.0% | |
| GATTACCTCAGCGAAACATG+CGG | + | chr4_4:10640109-10640128 | None:intergenic | 45.0% | |
| TACACTACGCTACACTACAC+AGG | + | chr4_4:10640139-10640158 | None:intergenic | 45.0% | |
| TGTGTAGTGTAGCGTAGTGT+AGG | - | chr4_4:10640138-10640157 | Msa0669070:three_prime_UTR | 45.0% | |
| ! | CTTTGCACTTGTGGCAGTTT+TGG | + | chr4_4:10640613-10640632 | None:intergenic | 45.0% |
| TGCCACAAGTGCAAAGCTTA+GGG | - | chr4_4:10640617-10640636 | Msa0669070:intron | 45.0% | |
| ! | TGGAGTAATGTGTCTGGTTC+GGG | + | chr4_4:10640845-10640864 | None:intergenic | 45.0% |
| GTGGAGTAATGTGTCTGGTT+CGG | + | chr4_4:10640846-10640865 | None:intergenic | 45.0% | |
| TCAATGGTGGTCAGTCACAA+TGG | - | chr4_4:10640898-10640917 | Msa0669070:intron | 45.0% | |
| CAATGGTGGTCAGTCACAAT+GGG | - | chr4_4:10640899-10640918 | Msa0669070:intron | 45.0% | |
| GGAAAGGATCAGAATCGACT+GGG | + | chr4_4:10641236-10641255 | None:intergenic | 45.0% | |
| TGGAAAGGATCAGAATCGAC+TGG | + | chr4_4:10641237-10641256 | None:intergenic | 45.0% | |
| AAGGGAATGAATGGAAACGG+GGG | + | chr4_4:10641291-10641310 | None:intergenic | 45.0% | |
| TTGAAGCTGAAGCCTGACTT+TGG | + | chr4_4:10641712-10641731 | None:intergenic | 45.0% | |
| CTTCAAAAGCAAGCTGTAGC+TGG | - | chr4_4:10641726-10641745 | Msa0669070:intron | 45.0% | |
| AAGAAGGTCTTTCAGCACTC+TGG | - | chr4_4:10641811-10641830 | Msa0669070:CDS | 45.0% | |
| TAAGACTTTCTACACGGGGA+AGG | - | chr4_4:10642001-10642020 | Msa0669070:CDS | 45.0% | |
| ATTCAAATCAGAGCACACGG+TGG | + | chr4_4:10642126-10642145 | None:intergenic | 45.0% | |
| ! | TGTTACATCAACAGGTGCTG+TGG | - | chr4_4:10642235-10642254 | Msa0669070:CDS | 45.0% |
| ! | AACAGGTGCTGTGGCAATTA+TGG | - | chr4_4:10642244-10642263 | Msa0669070:CDS | 45.0% |
| GCAGAAGGAAAATTACCTCC+TGG | - | chr4_4:10642305-10642324 | Msa0669070:intron | 45.0% | |
| ACAACATTGTCAGTGAACCC+CGG | + | chr4_4:10642697-10642716 | None:intergenic | 45.0% | |
| ! | GGGTTTTTCGCTGTCTGTAT+TGG | - | chr4_4:10642745-10642764 | Msa0669070:intron | 45.0% |
| CTTTATGGTCCATTAAGGCG+GGG | - | chr4_4:10643002-10643021 | Msa0669070:intron | 45.0% | |
| CAGGTCAAGTCGAGAATGAT+GGG | - | chr4_4:10643151-10643170 | Msa0669070:intron | 45.0% | |
| GATCCTAGCCGTCCAAAATT+TGG | + | chr4_4:10643785-10643804 | None:intergenic | 45.0% | |
| ! | ATTTTGGACGGCTAGGATCT+TGG | - | chr4_4:10643786-10643805 | Msa0669070:intron | 45.0% |
| ! | CTCACAATTTTCTCTCACGC+AGG | - | chr4_4:10643989-10644008 | Msa0669070:intron | 45.0% |
| AGTTGGACCAAAGGAGAGGT+TGG | + | chr4_4:10640067-10640086 | None:intergenic | 50.0% | |
| CGAAAGTTGGACCAAAGGAG+AGG | + | chr4_4:10640071-10640090 | None:intergenic | 50.0% | |
| !! | AAAGCACTGCTGGCGAAAGT+TGG | + | chr4_4:10640084-10640103 | None:intergenic | 50.0% |
| TTTCTCCGCATGTTTCGCTG+AGG | - | chr4_4:10640101-10640120 | Msa0669070:three_prime_UTR | 50.0% | |
| CAGTTGCAAAACTTAGGGGG+CGG | + | chr4_4:10640484-10640503 | None:intergenic | 50.0% | |
| TAACACGTGGCACCTCACTT+AGG | - | chr4_4:10640545-10640564 | Msa0669070:intron | 50.0% | |
| AACACGTGGCACCTCACTTA+GGG | - | chr4_4:10640546-10640565 | Msa0669070:intron | 50.0% | |
| TAACTTGGTCTACGCTGACG+TGG | + | chr4_4:10640574-10640593 | None:intergenic | 50.0% | |
| CTGCCACAAGTGCAAAGCTT+AGG | - | chr4_4:10640616-10640635 | Msa0669070:intron | 50.0% | |
| GCCACAAGTGCAAAGCTTAG+GGG | - | chr4_4:10640618-10640637 | Msa0669070:intron | 50.0% | |
| CCACAAGTGCAAAGCTTAGG+GGG | - | chr4_4:10640619-10640638 | Msa0669070:intron | 50.0% | |
| GGGGCCAAAATCGCAACTTT+GGG | - | chr4_4:10640666-10640685 | Msa0669070:intron | 50.0% | |
| ACAATGGGTGATGACTGCTC+TGG | - | chr4_4:10640914-10640933 | Msa0669070:intron | 50.0% | |
| GTGGAACGGAGGAAACTCAA+GGG | + | chr4_4:10641214-10641233 | None:intergenic | 50.0% | |
| TCAGAATCGACTGGGTGGAA+CGG | + | chr4_4:10641228-10641247 | None:intergenic | 50.0% | |
| AAGGATCAGAATCGACTGGG+TGG | + | chr4_4:10641233-10641252 | None:intergenic | 50.0% | |
| TTTGGCGGTGTCCAAAGGTA+TGG | + | chr4_4:10641694-10641713 | None:intergenic | 50.0% | |
| AAGCTGAAGCCTGACTTTGG+CGG | + | chr4_4:10641709-10641728 | None:intergenic | 50.0% | |
| ! | AAGGGTATGTTGGGAACGGT+TGG | - | chr4_4:10641774-10641793 | Msa0669070:CDS | 50.0% |
| AACGGTTGGAACGATTGCCA+GGG | - | chr4_4:10641788-10641807 | Msa0669070:CDS | 50.0% | |
| TGCTGAAAGACCTTCTTCCC+TGG | + | chr4_4:10641808-10641827 | None:intergenic | 50.0% | |
| AGGTCTTTCAGCACTCTGGA+AGG | - | chr4_4:10641815-10641834 | Msa0669070:CDS | 50.0% | |
| ! | GGTCTTTCAGCACTCTGGAA+GGG | - | chr4_4:10641816-10641835 | Msa0669070:CDS | 50.0% |
| AAACATTGACGATGCAGCCC+TGG | + | chr4_4:10641849-10641868 | None:intergenic | 50.0% | |
| ! | AGGTGCTGTGGCAATTATGG+TGG | - | chr4_4:10642247-10642266 | Msa0669070:CDS | 50.0% |
| AATTACCTCCTGGTGTTCCC+AGG | - | chr4_4:10642315-10642334 | Msa0669070:intron | 50.0% | |
| AAAGATCCAGAGTAGCGCCT+GGG | + | chr4_4:10642335-10642354 | None:intergenic | 50.0% | |
| AGGAAGGAGTTCGAGCTCTA+TGG | - | chr4_4:10642470-10642489 | Msa0669070:CDS | 50.0% | |
| GAGTTCGAGCTCTATGGACA+GGG | - | chr4_4:10642476-10642495 | Msa0669070:CDS | 50.0% | |
| GGTCCCAACATAGCGAGAAA+TGG | - | chr4_4:10642502-10642521 | Msa0669070:CDS | 50.0% | |
| ! | ACTCATCTCTTTGCTGGCCT+TGG | - | chr4_4:10642718-10642737 | Msa0669070:intron | 50.0% |
| !! | CTCATCTCTTTGCTGGCCTT+GGG | - | chr4_4:10642719-10642738 | Msa0669070:intron | 50.0% |
| !! | TCATCTCTTTGCTGGCCTTG+GGG | - | chr4_4:10642720-10642739 | Msa0669070:intron | 50.0% |
| !! | TATTGGCTCCCCAGTTGATG+TGG | - | chr4_4:10642762-10642781 | Msa0669070:intron | 50.0% |
| GCAGGTCAAGTCGAGAATGA+TGG | - | chr4_4:10643150-10643169 | Msa0669070:intron | 50.0% | |
| ! | GTTTTTCCCCGAATGCCCTA+TGG | - | chr4_4:10643424-10643443 | Msa0669070:intron | 50.0% |
| ! | AACCCACACCATAGGGCATT+CGG | + | chr4_4:10643435-10643454 | None:intergenic | 50.0% |
| AATGCCCTATGGTGTGGGTT+GGG | - | chr4_4:10643435-10643454 | Msa0669070:intron | 50.0% | |
| ATGTCCCAACCCACACCATA+GGG | + | chr4_4:10643442-10643461 | None:intergenic | 50.0% | |
| AGCATCAGAAATCGAACCCC+TGG | + | chr4_4:10643488-10643507 | None:intergenic | 50.0% | |
| TGGTGTTTCTCAGGGACCTT+TGG | - | chr4_4:10643739-10643758 | Msa0669070:intron | 50.0% | |
| CTAGCCGTCCAAAATTTGGG+AGG | + | chr4_4:10643781-10643800 | None:intergenic | 50.0% | |
| ! | CTCCCAAATTTTGGACGGCT+AGG | - | chr4_4:10643779-10643798 | Msa0669070:intron | 50.0% |
| GCTGGCGAAAGTTGGACCAA+AGG | + | chr4_4:10640076-10640095 | None:intergenic | 55.0% | |
| !! | ACATGCGGAGAAAGCACTGC+TGG | + | chr4_4:10640094-10640113 | None:intergenic | 55.0% |
| !! | GTAGCAGTTTTGGCCCACCA+AGG | - | chr4_4:10640503-10640522 | Msa0669070:CDS | 55.0% |
| ! | GGCCCACCAAGGCCAATTTT+TGG | - | chr4_4:10640514-10640533 | Msa0669070:CDS | 55.0% |
| CCCCCTAAGCTTTGCACTTG+TGG | + | chr4_4:10640622-10640641 | None:intergenic | 55.0% | |
| GGGGGCCAAAATCGCAACTT+TGG | - | chr4_4:10640665-10640684 | Msa0669070:intron | 55.0% | |
| GGTGGAACGGAGGAAACTCA+AGG | + | chr4_4:10641215-10641234 | None:intergenic | 55.0% | |
| ACGGGGGAAGTTCCTTCTTC+AGG | + | chr4_4:10641275-10641294 | None:intergenic | 55.0% | |
| CTGACTTTGGCGGTGTCCAA+AGG | + | chr4_4:10641699-10641718 | None:intergenic | 55.0% | |
| CTTTGGACACCGCCAAAGTC+AGG | - | chr4_4:10641697-10641716 | Msa0669070:intron | 55.0% | |
| GAACGGTTGGAACGATTGCC+AGG | - | chr4_4:10641787-10641806 | Msa0669070:CDS | 55.0% | |
| GGAACGATTGCCAGGGAAGA+AGG | - | chr4_4:10641795-10641814 | Msa0669070:CDS | 55.0% | |
| !! | TCTGGAAGGGCATTGTGCCA+GGG | - | chr4_4:10641829-10641848 | Msa0669070:intron | 55.0% |
| TACACGGGGAAGGACCATGT+GGG | - | chr4_4:10642011-10642030 | Msa0669070:CDS | 55.0% | |
| ACAGTGGAACATCGCCCACA+TGG | + | chr4_4:10642028-10642047 | None:intergenic | 55.0% | |
| CAAAGATCCAGAGTAGCGCC+TGG | + | chr4_4:10642336-10642355 | None:intergenic | 55.0% | |
| GGAGTTCGAGCTCTATGGAC+AGG | - | chr4_4:10642475-10642494 | Msa0669070:CDS | 55.0% | |
| ! | ACCCACACCATAGGGCATTC+GGG | + | chr4_4:10643434-10643453 | None:intergenic | 55.0% |
| GAATGCCCTATGGTGTGGGT+TGG | - | chr4_4:10643434-10643453 | Msa0669070:intron | 55.0% | |
| CATGTCCCAACCCACACCAT+AGG | + | chr4_4:10643443-10643462 | None:intergenic | 55.0% | |
| CTGACGTGGCACCCTAAGTG+AGG | + | chr4_4:10640560-10640579 | None:intergenic | 60.0% | |
| GGGTGATGACTGCTCTGGTC+TGG | - | chr4_4:10640919-10640938 | Msa0669070:intron | 60.0% | |
| GAATCGACTGGGTGGAACGG+AGG | + | chr4_4:10641225-10641244 | None:intergenic | 60.0% | |
| !! | CTCTGGAAGGGCATTGTGCC+AGG | - | chr4_4:10641828-10641847 | Msa0669070:intron | 60.0% |
| CTACACGGGGAAGGACCATG+TGG | - | chr4_4:10642010-10642029 | Msa0669070:CDS | 60.0% | |
| CGAGCTCTATGGACAGGGCT+TGG | - | chr4_4:10642481-10642500 | Msa0669070:CDS | 60.0% | |
| !! | TCTTTGCTGGCCTTGGGGCA+GGG | - | chr4_4:10642725-10642744 | Msa0669070:intron | 60.0% |
| CAGCGAAAAACCCTGCCCCA+AGG | + | chr4_4:10642738-10642757 | None:intergenic | 60.0% | |
| TCCCCGAATGCCCTATGGTG+TGG | - | chr4_4:10643429-10643448 | Msa0669070:intron | 60.0% | |
| ! | CCCACACCATAGGGCATTCG+GGG | + | chr4_4:10643433-10643452 | None:intergenic | 60.0% |
| CCCCGAATGCCCTATGGTGT+GGG | - | chr4_4:10643430-10643449 | Msa0669070:intron | 60.0% | |
| TAGCGCCTGGGAACACCAGG+AGG | + | chr4_4:10642323-10642342 | None:intergenic | 65.0% | |
| GAGTAGCGCCTGGGAACACC+AGG | + | chr4_4:10642326-10642345 | None:intergenic | 65.0% | |
| GGTGTTCCCAGGCGCTACTC+TGG | - | chr4_4:10642326-10642345 | Msa0669070:intron | 65.0% | |
| !! | CTCTTTGCTGGCCTTGGGGC+AGG | - | chr4_4:10642724-10642743 | Msa0669070:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 10639875 | 10644436 | 10639875 | ID=Msa0669070;Name=Msa0669070 |
| chr4_4 | mRNA | 10639875 | 10644436 | 10639875 | ID=Msa0669070-mRNA-1;Parent=Msa0669070;Name=Msa0669070-mRNA-1;_AED=0.13;_eAED=0.13;_QI=170|1|1|1|1|1|9|390|303 |
| chr4_4 | exon | 10639875 | 10640300 | 10639875 | ID=Msa0669070-mRNA-1:exon:3193;Parent=Msa0669070-mRNA-1 |
| chr4_4 | exon | 10640473 | 10640559 | 10640473 | ID=Msa0669070-mRNA-1:exon:3192;Parent=Msa0669070-mRNA-1 |
| chr4_4 | exon | 10641083 | 10641157 | 10641083 | ID=Msa0669070-mRNA-1:exon:3191;Parent=Msa0669070-mRNA-1 |
| chr4_4 | exon | 10641528 | 10641632 | 10641528 | ID=Msa0669070-mRNA-1:exon:3190;Parent=Msa0669070-mRNA-1 |
| chr4_4 | exon | 10641741 | 10641839 | 10641741 | ID=Msa0669070-mRNA-1:exon:3189;Parent=Msa0669070-mRNA-1 |
| chr4_4 | exon | 10641929 | 10642062 | 10641929 | ID=Msa0669070-mRNA-1:exon:3188;Parent=Msa0669070-mRNA-1 |
| chr4_4 | exon | 10642234 | 10642312 | 10642234 | ID=Msa0669070-mRNA-1:exon:3187;Parent=Msa0669070-mRNA-1 |
| chr4_4 | exon | 10642409 | 10642627 | 10642409 | ID=Msa0669070-mRNA-1:exon:3186;Parent=Msa0669070-mRNA-1 |
| chr4_4 | exon | 10644189 | 10644436 | 10644189 | ID=Msa0669070-mRNA-1:exon:3185;Parent=Msa0669070-mRNA-1 |
| chr4_4 | five_prime_UTR | 10644267 | 10644436 | 10644267 | ID=Msa0669070-mRNA-1:five_prime_utr;Parent=Msa0669070-mRNA-1 |
| chr4_4 | CDS | 10644189 | 10644266 | 10644189 | ID=Msa0669070-mRNA-1:cds;Parent=Msa0669070-mRNA-1 |
| chr4_4 | CDS | 10642409 | 10642627 | 10642409 | ID=Msa0669070-mRNA-1:cds;Parent=Msa0669070-mRNA-1 |
| chr4_4 | CDS | 10642234 | 10642312 | 10642234 | ID=Msa0669070-mRNA-1:cds;Parent=Msa0669070-mRNA-1 |
| chr4_4 | CDS | 10641929 | 10642062 | 10641929 | ID=Msa0669070-mRNA-1:cds;Parent=Msa0669070-mRNA-1 |
| chr4_4 | CDS | 10641741 | 10641839 | 10641741 | ID=Msa0669070-mRNA-1:cds;Parent=Msa0669070-mRNA-1 |
| chr4_4 | CDS | 10641528 | 10641632 | 10641528 | ID=Msa0669070-mRNA-1:cds;Parent=Msa0669070-mRNA-1 |
| chr4_4 | CDS | 10641083 | 10641157 | 10641083 | ID=Msa0669070-mRNA-1:cds;Parent=Msa0669070-mRNA-1 |
| chr4_4 | CDS | 10640473 | 10640559 | 10640473 | ID=Msa0669070-mRNA-1:cds;Parent=Msa0669070-mRNA-1 |
| chr4_4 | CDS | 10640265 | 10640300 | 10640265 | ID=Msa0669070-mRNA-1:cds;Parent=Msa0669070-mRNA-1 |
| chr4_4 | three_prime_UTR | 10639875 | 10640264 | 10639875 | ID=Msa0669070-mRNA-1:three_prime_utr;Parent=Msa0669070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
