Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0630500 | XP_003604785.1 | 99.670 | 303 | 1 | 0 | 1 | 303 | 1 | 303 | 0.0 | 618 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0630500 | sp|O81845|PUMP1_ARATH | 82.566 | 304 | 51 | 2 | 1 | 303 | 1 | 303 | 0.0 | 523 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0630500 | Msa0656320 | 0.814546 | 1.457801e-51 | -8.615850e-47 |
Msa0630500 | Msa0669070 | 0.838773 | 2.356095e-57 | -8.615850e-47 |
Msa0630500 | Msa1325470 | 0.814282 | 1.668148e-51 | -8.615850e-47 |
Msa0630500 | Msa1334040 | 0.800682 | 1.285172e-48 | -8.615850e-47 |
Msa0169070 | Msa0630500 | 0.801784 | 7.646200e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0630500 | MtrunA17_Chr4g0008061 | 99.670 | 303 | 1 | 0 | 1 | 303 | 1 | 303 | 0.0 | 618 |
Msa0630500 | MtrunA17_Chr7g0241521 | 88.667 | 300 | 34 | 0 | 4 | 303 | 6 | 305 | 0.0 | 560 |
Msa0630500 | MtrunA17_Chr3g0103681 | 75.676 | 296 | 71 | 1 | 1 | 295 | 1 | 296 | 2.19e-159 | 446 |
Msa0630500 | MtrunA17_Chr3g0133111 | 36.246 | 309 | 173 | 4 | 15 | 300 | 6 | 313 | 2.65e-60 | 194 |
Msa0630500 | MtrunA17_Chr3g0133111 | 27.222 | 180 | 101 | 4 | 122 | 271 | 5 | 184 | 7.28e-11 | 62.0 |
Msa0630500 | MtrunA17_Chr5g0412401 | 35.873 | 315 | 171 | 3 | 15 | 298 | 6 | 320 | 2.66e-60 | 195 |
Msa0630500 | MtrunA17_Chr8g0367641 | 36.538 | 312 | 170 | 6 | 15 | 300 | 6 | 315 | 8.59e-59 | 191 |
Msa0630500 | MtrunA17_Chr1g0196921 | 36.111 | 288 | 169 | 5 | 18 | 297 | 17 | 297 | 3.23e-58 | 189 |
Msa0630500 | MtrunA17_Chr1g0196921 | 29.787 | 188 | 120 | 3 | 118 | 296 | 13 | 197 | 1.52e-15 | 75.5 |
Msa0630500 | MtrunA17_Chr8g0378951 | 32.192 | 292 | 177 | 4 | 15 | 299 | 21 | 298 | 5.24e-39 | 139 |
Msa0630500 | MtrunA17_Chr4g0028531 | 28.852 | 305 | 185 | 10 | 17 | 303 | 24 | 314 | 1.99e-31 | 119 |
Msa0630500 | MtrunA17_Chr4g0028531 | 28.495 | 186 | 115 | 6 | 112 | 287 | 15 | 192 | 3.81e-11 | 62.8 |
Msa0630500 | MtrunA17_Chr1g0196161 | 34.270 | 178 | 105 | 2 | 126 | 297 | 4 | 175 | 1.91e-28 | 107 |
Msa0630500 | MtrunA17_Chr8g0372531 | 28.920 | 287 | 175 | 7 | 31 | 298 | 30 | 306 | 1.74e-25 | 103 |
Msa0630500 | MtrunA17_Chr7g0252401 | 32.624 | 282 | 158 | 8 | 25 | 295 | 217 | 477 | 3.98e-24 | 101 |
Msa0630500 | MtrunA17_Chr2g0296061 | 23.899 | 318 | 203 | 7 | 16 | 300 | 16 | 327 | 2.17e-23 | 97.8 |
Msa0630500 | MtrunA17_Chr4g0067231 | 25.857 | 321 | 197 | 10 | 16 | 301 | 15 | 329 | 2.40e-23 | 97.8 |
Msa0630500 | MtrunA17_Chr4g0067231 | 26.267 | 217 | 130 | 6 | 3 | 201 | 117 | 321 | 7.38e-12 | 65.1 |
Msa0630500 | MtrunA17_Chr1g0195101 | 28.767 | 292 | 178 | 10 | 27 | 303 | 33 | 309 | 1.42e-22 | 95.5 |
Msa0630500 | MtrunA17_Chr4g0006851 | 25.357 | 280 | 186 | 7 | 26 | 296 | 100 | 365 | 2.99e-22 | 95.5 |
Msa0630500 | MtrunA17_Chr7g0269701 | 27.551 | 294 | 189 | 8 | 16 | 296 | 23 | 305 | 1.27e-20 | 90.1 |
Msa0630500 | MtrunA17_Chr5g0411411 | 29.643 | 280 | 171 | 10 | 31 | 294 | 25 | 294 | 2.80e-20 | 89.0 |
Msa0630500 | MtrunA17_Chr5g0411411 | 26.500 | 200 | 132 | 3 | 110 | 296 | 2 | 199 | 2.02e-15 | 75.1 |
Msa0630500 | MtrunA17_Chr5g0411411 | 27.225 | 191 | 126 | 4 | 17 | 205 | 118 | 297 | 1.91e-14 | 72.4 |
Msa0630500 | MtrunA17_Chr7g0242311 | 24.597 | 248 | 172 | 6 | 29 | 275 | 101 | 334 | 3.37e-20 | 89.7 |
Msa0630500 | MtrunA17_Chr7g0242311 | 25.758 | 198 | 126 | 3 | 8 | 205 | 180 | 356 | 2.08e-11 | 63.9 |
Msa0630500 | MtrunA17_Chr7g0275411 | 27.164 | 335 | 199 | 11 | 3 | 297 | 5 | 334 | 4.84e-20 | 89.0 |
Msa0630500 | MtrunA17_Chr7g0240341 | 25.503 | 298 | 199 | 8 | 20 | 302 | 30 | 319 | 9.99e-20 | 87.8 |
Msa0630500 | MtrunA17_Chr8g0366791 | 28.772 | 285 | 167 | 10 | 31 | 294 | 25 | 294 | 1.44e-19 | 87.0 |
Msa0630500 | MtrunA17_Chr8g0366791 | 29.327 | 208 | 131 | 4 | 110 | 303 | 2 | 207 | 2.71e-19 | 86.3 |
Msa0630500 | MtrunA17_Chr8g0366791 | 27.638 | 199 | 138 | 3 | 9 | 205 | 103 | 297 | 4.18e-15 | 74.3 |
Msa0630500 | MtrunA17_Chr3g0135801 | 25.547 | 274 | 193 | 4 | 31 | 296 | 50 | 320 | 2.04e-19 | 87.0 |
Msa0630500 | MtrunA17_Chr5g0396801 | 25.552 | 317 | 192 | 9 | 9 | 294 | 32 | 335 | 2.65e-19 | 86.7 |
Msa0630500 | MtrunA17_Chr5g0396801 | 26.471 | 204 | 131 | 4 | 15 | 205 | 141 | 338 | 6.18e-14 | 71.2 |
Msa0630500 | MtrunA17_Chr8g0347451 | 25.305 | 328 | 198 | 10 | 2 | 294 | 35 | 350 | 2.32e-18 | 84.3 |
Msa0630500 | MtrunA17_Chr8g0347451 | 27.184 | 206 | 129 | 3 | 15 | 205 | 154 | 353 | 5.24e-16 | 77.4 |
Msa0630500 | MtrunA17_Chr8g0383321 | 27.143 | 280 | 157 | 8 | 26 | 296 | 63 | 304 | 4.10e-18 | 83.2 |
Msa0630500 | MtrunA17_Chr8g0385571 | 27.891 | 294 | 179 | 10 | 15 | 295 | 227 | 500 | 6.75e-18 | 84.0 |
Msa0630500 | MtrunA17_Chr5g0423111 | 25.887 | 282 | 185 | 7 | 27 | 296 | 35 | 304 | 1.60e-16 | 79.0 |
Msa0630500 | MtrunA17_Chr3g0135861 | 24.503 | 302 | 196 | 6 | 17 | 296 | 37 | 328 | 4.93e-16 | 77.4 |
Msa0630500 | MtrunA17_Chr1g0201361 | 27.737 | 274 | 161 | 9 | 26 | 295 | 62 | 302 | 7.28e-16 | 76.6 |
Msa0630500 | MtrunA17_Chr3g0126331 | 25.153 | 326 | 181 | 10 | 17 | 280 | 46 | 370 | 8.27e-16 | 77.0 |
Msa0630500 | MtrunA17_Chr7g0219891 | 25.175 | 286 | 189 | 8 | 27 | 296 | 33 | 309 | 9.09e-16 | 76.3 |
Msa0630500 | MtrunA17_Chr2g0328891 | 25.325 | 308 | 208 | 9 | 5 | 296 | 56 | 357 | 2.01e-15 | 75.9 |
Msa0630500 | MtrunA17_Chr3g0131501 | 25.510 | 294 | 186 | 9 | 15 | 295 | 205 | 478 | 2.32e-15 | 76.3 |
Msa0630500 | MtrunA17_Chr4g0051841 | 25.180 | 278 | 171 | 8 | 11 | 274 | 25 | 279 | 2.94e-15 | 75.1 |
Msa0630500 | MtrunA17_Chr2g0293621 | 27.622 | 286 | 173 | 8 | 34 | 297 | 46 | 319 | 3.16e-15 | 75.1 |
Msa0630500 | MtrunA17_Chr2g0331771 | 23.704 | 270 | 183 | 7 | 12 | 272 | 153 | 408 | 3.54e-15 | 75.5 |
Msa0630500 | MtrunA17_Chr2g0331771 | 28.824 | 170 | 113 | 4 | 31 | 199 | 265 | 427 | 7.21e-12 | 65.5 |
Msa0630500 | MtrunA17_Chr4g0046981 | 30.682 | 176 | 110 | 6 | 31 | 202 | 28 | 195 | 1.38e-14 | 72.8 |
Msa0630500 | MtrunA17_Chr4g0004571 | 28.235 | 170 | 112 | 4 | 31 | 199 | 126 | 286 | 1.87e-14 | 72.4 |
Msa0630500 | MtrunA17_Chr4g0004571 | 23.826 | 298 | 199 | 8 | 10 | 296 | 11 | 291 | 9.08e-14 | 70.5 |
Msa0630500 | MtrunA17_Chr6g0455381 | 23.875 | 289 | 189 | 7 | 27 | 296 | 29 | 305 | 3.81e-14 | 71.6 |
Msa0630500 | MtrunA17_Chr1g0200171 | 24.345 | 267 | 175 | 7 | 31 | 295 | 541 | 782 | 6.33e-14 | 72.4 |
Msa0630500 | MtrunA17_Chr3g0086811 | 23.585 | 318 | 202 | 9 | 5 | 291 | 18 | 325 | 3.92e-13 | 68.9 |
Msa0630500 | MtrunA17_Chr8g0352031 | 25.725 | 276 | 183 | 9 | 10 | 271 | 63 | 330 | 1.18e-12 | 67.8 |
Msa0630500 | MtrunA17_Chr6g0461981 | 27.313 | 227 | 133 | 8 | 24 | 237 | 72 | 279 | 4.05e-12 | 65.9 |
Msa0630500 | MtrunA17_Chr8g0385891 | 26.531 | 245 | 143 | 9 | 11 | 237 | 64 | 289 | 6.76e-12 | 65.5 |
Msa0630500 | MtrunA17_Chr3g0088301 | 25.993 | 277 | 184 | 9 | 15 | 278 | 93 | 361 | 8.41e-12 | 65.1 |
Msa0630500 | MtrunA17_Chr4g0040341 | 24.812 | 266 | 187 | 9 | 15 | 271 | 75 | 336 | 1.02e-11 | 65.1 |
Msa0630500 | MtrunA17_Chr5g0407451 | 28.804 | 184 | 105 | 5 | 21 | 200 | 27 | 188 | 1.96e-11 | 63.5 |
Msa0630500 | MtrunA17_Chr6g0488081 | 22.118 | 321 | 213 | 10 | 1 | 298 | 1 | 307 | 3.53e-11 | 63.2 |
Msa0630500 | MtrunA17_Chr8g0393031 | 21.269 | 268 | 202 | 6 | 15 | 275 | 18 | 283 | 8.16e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0630500 | AT3G54110.1 | 82.566 | 304 | 51 | 2 | 1 | 303 | 1 | 303 | 0.0 | 523 |
Msa0630500 | AT5G58970.1 | 72.759 | 290 | 79 | 0 | 6 | 295 | 7 | 296 | 9.98e-166 | 462 |
Msa0630500 | AT5G58970.1 | 27.083 | 192 | 126 | 4 | 17 | 207 | 122 | 300 | 9.36e-17 | 79.3 |
Msa0630500 | AT5G58970.2 | 66.171 | 269 | 85 | 2 | 6 | 272 | 7 | 271 | 7.92e-128 | 365 |
Msa0630500 | AT1G14140.1 | 37.063 | 286 | 170 | 4 | 18 | 297 | 19 | 300 | 9.70e-62 | 198 |
Msa0630500 | AT1G14140.1 | 30.151 | 199 | 122 | 4 | 112 | 296 | 9 | 204 | 6.33e-17 | 80.1 |
Msa0630500 | AT4G24570.1 | 38.188 | 309 | 165 | 4 | 14 | 298 | 5 | 311 | 1.06e-60 | 196 |
Msa0630500 | AT2G22500.1 | 37.377 | 305 | 169 | 3 | 15 | 298 | 6 | 309 | 3.12e-59 | 192 |
Msa0630500 | AT5G09470.1 | 39.331 | 239 | 141 | 3 | 66 | 301 | 99 | 336 | 1.89e-50 | 170 |
Msa0630500 | AT5G09470.1 | 28.814 | 177 | 107 | 3 | 31 | 202 | 167 | 329 | 7.45e-15 | 74.3 |
Msa0630500 | AT4G03115.1 | 34.256 | 289 | 167 | 5 | 15 | 297 | 38 | 309 | 1.16e-48 | 165 |
Msa0630500 | AT4G03115.3 | 34.256 | 289 | 167 | 5 | 15 | 297 | 70 | 341 | 3.01e-48 | 164 |
Msa0630500 | AT4G03115.6 | 34.146 | 246 | 145 | 4 | 58 | 297 | 12 | 246 | 5.11e-43 | 148 |
Msa0630500 | AT4G03115.6 | 25.714 | 175 | 110 | 4 | 10 | 179 | 61 | 220 | 9.25e-11 | 61.6 |
Msa0630500 | AT4G03115.5 | 34.034 | 238 | 140 | 4 | 66 | 297 | 12 | 238 | 4.13e-42 | 145 |
Msa0630500 | AT4G03115.5 | 26.087 | 184 | 116 | 4 | 10 | 188 | 53 | 221 | 7.03e-11 | 61.6 |
Msa0630500 | AT5G19760.1 | 31.613 | 310 | 188 | 4 | 1 | 300 | 1 | 296 | 1.36e-40 | 143 |
Msa0630500 | AT4G03115.2 | 35.437 | 206 | 116 | 4 | 15 | 220 | 38 | 226 | 1.22e-30 | 115 |
Msa0630500 | AT4G03115.4 | 35.610 | 205 | 115 | 4 | 15 | 219 | 38 | 225 | 2.28e-30 | 114 |
Msa0630500 | AT5G01340.1 | 28.028 | 289 | 182 | 8 | 17 | 292 | 19 | 294 | 2.33e-27 | 108 |
Msa0630500 | AT5G01340.1 | 32.275 | 189 | 117 | 5 | 18 | 201 | 113 | 295 | 2.19e-14 | 72.8 |
Msa0630500 | AT5G48970.1 | 26.168 | 321 | 195 | 8 | 16 | 300 | 23 | 337 | 2.90e-26 | 106 |
Msa0630500 | AT5G66380.1 | 30.132 | 302 | 182 | 11 | 16 | 298 | 10 | 301 | 1.99e-24 | 100 |
Msa0630500 | AT5G66380.1 | 28.986 | 207 | 131 | 6 | 15 | 213 | 110 | 308 | 4.53e-15 | 74.7 |
Msa0630500 | AT5G61810.2 | 30.070 | 286 | 171 | 8 | 17 | 295 | 67 | 330 | 4.68e-23 | 97.4 |
Msa0630500 | AT3G21390.1 | 25.402 | 311 | 191 | 6 | 21 | 296 | 25 | 329 | 4.92e-23 | 97.4 |
Msa0630500 | AT3G51870.1 | 25.735 | 272 | 187 | 6 | 26 | 296 | 102 | 359 | 5.34e-23 | 98.2 |
Msa0630500 | AT3G21390.2 | 25.402 | 311 | 191 | 6 | 21 | 296 | 47 | 351 | 8.10e-23 | 97.1 |
Msa0630500 | AT5G61810.1 | 30.935 | 278 | 163 | 8 | 25 | 295 | 218 | 473 | 2.39e-22 | 97.1 |
Msa0630500 | AT5G01500.1 | 26.667 | 270 | 183 | 6 | 28 | 296 | 132 | 387 | 2.64e-22 | 96.7 |
Msa0630500 | AT2G47490.1 | 29.577 | 284 | 171 | 10 | 27 | 296 | 31 | 299 | 3.63e-22 | 94.7 |
Msa0630500 | AT5G46800.2 | 29.433 | 282 | 172 | 9 | 31 | 294 | 24 | 296 | 4.67e-22 | 94.4 |
Msa0630500 | AT5G46800.2 | 27.041 | 196 | 127 | 2 | 117 | 296 | 6 | 201 | 1.36e-17 | 81.6 |
Msa0630500 | AT5G46800.2 | 32.000 | 200 | 117 | 6 | 12 | 205 | 113 | 299 | 1.51e-16 | 79.0 |
Msa0630500 | AT5G46800.3 | 29.433 | 282 | 172 | 9 | 31 | 294 | 24 | 296 | 4.67e-22 | 94.4 |
Msa0630500 | AT5G46800.3 | 27.041 | 196 | 127 | 2 | 117 | 296 | 6 | 201 | 1.36e-17 | 81.6 |
Msa0630500 | AT5G46800.3 | 32.000 | 200 | 117 | 6 | 12 | 205 | 113 | 299 | 1.51e-16 | 79.0 |
Msa0630500 | AT5G46800.1 | 29.433 | 282 | 172 | 9 | 31 | 294 | 24 | 296 | 4.67e-22 | 94.4 |
Msa0630500 | AT5G46800.1 | 27.041 | 196 | 127 | 2 | 117 | 296 | 6 | 201 | 1.36e-17 | 81.6 |
Msa0630500 | AT5G46800.1 | 32.000 | 200 | 117 | 6 | 12 | 205 | 113 | 299 | 1.51e-16 | 79.0 |
Msa0630500 | AT3G53940.1 | 26.280 | 293 | 195 | 6 | 21 | 300 | 79 | 363 | 8.89e-21 | 91.7 |
Msa0630500 | AT5G07320.1 | 29.787 | 282 | 161 | 9 | 25 | 295 | 219 | 474 | 1.09e-20 | 92.4 |
Msa0630500 | AT5G56450.1 | 27.586 | 290 | 171 | 11 | 31 | 296 | 50 | 324 | 3.12e-19 | 86.7 |
Msa0630500 | AT5G56450.1 | 25.000 | 192 | 130 | 5 | 14 | 203 | 144 | 323 | 3.19e-11 | 63.5 |
Msa0630500 | AT3G55640.1 | 24.606 | 317 | 216 | 8 | 1 | 303 | 24 | 331 | 4.59e-19 | 86.3 |
Msa0630500 | AT3G55640.4 | 24.606 | 317 | 216 | 8 | 1 | 303 | 24 | 331 | 4.59e-19 | 86.3 |
Msa0630500 | AT5G48970.2 | 25.000 | 272 | 168 | 7 | 59 | 300 | 1 | 266 | 2.32e-18 | 83.6 |
Msa0630500 | AT4G01100.3 | 28.620 | 297 | 166 | 11 | 31 | 294 | 8 | 291 | 2.69e-18 | 84.0 |
Msa0630500 | AT4G01100.3 | 27.670 | 206 | 128 | 5 | 15 | 205 | 95 | 294 | 1.28e-13 | 70.5 |
Msa0630500 | AT4G01100.1 | 28.620 | 297 | 166 | 11 | 31 | 294 | 58 | 341 | 2.80e-18 | 84.3 |
Msa0630500 | AT4G01100.1 | 27.670 | 206 | 128 | 5 | 15 | 205 | 145 | 344 | 1.89e-13 | 70.5 |
Msa0630500 | AT4G01100.1 | 28.902 | 173 | 107 | 5 | 115 | 275 | 38 | 206 | 2.13e-12 | 67.4 |
Msa0630500 | AT1G25380.1 | 26.370 | 292 | 180 | 11 | 27 | 300 | 35 | 309 | 3.45e-18 | 84.3 |
Msa0630500 | AT1G25380.2 | 26.370 | 292 | 180 | 11 | 27 | 300 | 35 | 309 | 3.45e-18 | 84.3 |
Msa0630500 | AT2G37890.1 | 27.273 | 297 | 187 | 11 | 21 | 300 | 51 | 335 | 4.04e-17 | 80.9 |
Msa0630500 | AT4G01100.2 | 27.653 | 311 | 165 | 11 | 31 | 294 | 58 | 355 | 4.81e-17 | 80.9 |
Msa0630500 | AT4G01100.2 | 28.218 | 202 | 124 | 5 | 19 | 205 | 163 | 358 | 1.27e-13 | 70.9 |
Msa0630500 | AT4G27940.1 | 24.405 | 336 | 194 | 7 | 5 | 280 | 55 | 390 | 4.82e-17 | 81.3 |
Msa0630500 | AT1G79900.1 | 25.461 | 271 | 175 | 7 | 31 | 295 | 32 | 281 | 2.70e-16 | 78.2 |
Msa0630500 | AT5G15640.1 | 26.190 | 294 | 178 | 9 | 27 | 296 | 40 | 318 | 3.39e-15 | 75.1 |
Msa0630500 | AT5G15640.2 | 26.190 | 294 | 178 | 9 | 27 | 296 | 33 | 311 | 3.41e-15 | 75.1 |
Msa0630500 | AT2G26360.1 | 26.429 | 280 | 174 | 7 | 21 | 293 | 121 | 375 | 3.43e-15 | 75.9 |
Msa0630500 | AT4G39460.2 | 25.170 | 294 | 165 | 10 | 15 | 295 | 58 | 309 | 1.22e-14 | 73.6 |
Msa0630500 | AT4G39460.1 | 25.170 | 294 | 165 | 10 | 15 | 295 | 58 | 309 | 1.22e-14 | 73.6 |
Msa0630500 | AT4G39460.3 | 25.170 | 294 | 165 | 10 | 15 | 295 | 58 | 309 | 1.22e-14 | 73.6 |
Msa0630500 | AT1G07030.1 | 29.775 | 178 | 118 | 4 | 119 | 295 | 40 | 211 | 1.43e-14 | 73.6 |
Msa0630500 | AT4G28390.1 | 24.382 | 283 | 201 | 7 | 5 | 278 | 73 | 351 | 2.95e-14 | 72.8 |
Msa0630500 | AT4G28390.2 | 24.382 | 283 | 201 | 7 | 5 | 278 | 73 | 351 | 2.95e-14 | 72.8 |
Msa0630500 | AT5G51050.1 | 27.148 | 291 | 182 | 10 | 15 | 295 | 223 | 493 | 8.43e-14 | 72.0 |
Msa0630500 | AT5G13490.1 | 25.000 | 276 | 185 | 9 | 10 | 271 | 83 | 350 | 1.27e-13 | 71.2 |
Msa0630500 | AT5G13490.2 | 25.000 | 276 | 185 | 9 | 10 | 271 | 83 | 350 | 1.27e-13 | 71.2 |
Msa0630500 | AT1G34065.2 | 24.415 | 299 | 165 | 10 | 14 | 296 | 74 | 327 | 1.41e-13 | 70.5 |
Msa0630500 | AT1G74240.1 | 25.606 | 289 | 177 | 9 | 15 | 275 | 36 | 314 | 1.52e-13 | 70.9 |
Msa0630500 | AT1G34065.1 | 24.415 | 299 | 165 | 10 | 14 | 296 | 81 | 334 | 1.89e-13 | 70.5 |
Msa0630500 | AT3G08580.2 | 25.725 | 276 | 183 | 9 | 10 | 271 | 79 | 346 | 5.33e-13 | 69.3 |
Msa0630500 | AT3G08580.1 | 25.725 | 276 | 183 | 9 | 10 | 271 | 79 | 346 | 5.33e-13 | 69.3 |
Msa0630500 | AT3G55640.2 | 26.316 | 209 | 138 | 6 | 1 | 202 | 24 | 223 | 6.23e-13 | 67.8 |
Msa0630500 | AT3G55640.3 | 26.316 | 209 | 138 | 6 | 1 | 202 | 24 | 223 | 6.23e-13 | 67.8 |
Msa0630500 | AT2G33820.4 | 27.419 | 248 | 155 | 8 | 2 | 231 | 1 | 241 | 6.80e-13 | 68.2 |
Msa0630500 | AT3G53940.2 | 27.404 | 208 | 137 | 4 | 21 | 222 | 79 | 278 | 9.23e-13 | 67.8 |
Msa0630500 | AT2G17270.1 | 26.966 | 267 | 154 | 8 | 21 | 274 | 28 | 266 | 9.32e-13 | 68.2 |
Msa0630500 | AT2G33820.1 | 27.937 | 315 | 195 | 11 | 2 | 295 | 1 | 304 | 1.68e-12 | 67.4 |
Msa0630500 | AT1G74240.2 | 26.007 | 273 | 164 | 9 | 31 | 275 | 4 | 266 | 1.79e-12 | 67.4 |
Msa0630500 | AT4G32400.1 | 24.739 | 287 | 189 | 8 | 17 | 295 | 116 | 383 | 4.70e-12 | 66.6 |
Msa0630500 | AT4G26180.2 | 22.105 | 285 | 190 | 8 | 11 | 276 | 17 | 288 | 9.41e-12 | 64.7 |
Msa0630500 | AT4G26180.1 | 22.105 | 285 | 190 | 8 | 11 | 276 | 17 | 288 | 1.60e-11 | 64.7 |
Msa0630500 | AT1G14560.3 | 27.230 | 213 | 139 | 7 | 9 | 209 | 17 | 225 | 2.45e-11 | 62.8 |
Msa0630500 | AT1G14560.2 | 28.342 | 187 | 119 | 6 | 9 | 183 | 115 | 298 | 3.12e-11 | 63.5 |
Msa0630500 | AT1G14560.1 | 27.230 | 213 | 139 | 7 | 9 | 209 | 115 | 323 | 4.56e-11 | 63.2 |
Msa0630500 | AT5G17400.1 | 26.866 | 201 | 130 | 6 | 11 | 207 | 115 | 302 | 7.02e-11 | 62.4 |
Find 115 sgRNAs with CRISPR-Local
Find 369 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAAACATACATCATTCTTTA+AGG | 0.120180 | 4_3:+12448935 | None:intergenic |
AAAGGATTCCTCCCAAATTT+TGG | 0.150450 | 4_3:-12448390 | Msa0630500:CDS |
TGTATAATGTATTTCGAAAT+TGG | 0.164416 | 4_3:+12452289 | None:intergenic |
GATCCTAGCCGTCCAAAATT+TGG | 0.180743 | 4_3:+12448378 | None:intergenic |
AGAACGTTCGTAGTTAAATT+TGG | 0.183661 | 4_3:+12447892 | None:intergenic |
ACTCATCTCTTTGCTGGCCT+TGG | 0.214926 | 4_3:-12449428 | Msa0630500:CDS |
CTCTTTGCTGGCCTTGGGGC+AGG | 0.217922 | 4_3:-12449422 | Msa0630500:CDS |
GCGTTTGAGAAATGAGAATT+TGG | 0.226877 | 4_3:+12452235 | None:intergenic |
CCCAACATACCCTTGTATTT+AGG | 0.228978 | 4_3:+12450382 | None:intergenic |
AATTTAACTACGAACGTTCT+TGG | 0.238865 | 4_3:-12447889 | Msa0630500:three_prime_UTR |
ATGGTCAACTATTATTGTTT+TGG | 0.279172 | 4_3:+12452313 | None:intergenic |
CTCATCTCTTTGCTGGCCTT+GGG | 0.285161 | 4_3:-12449427 | Msa0630500:CDS |
ATGATTAAATGTATTTATAA+TGG | 0.285266 | 4_3:+12447807 | None:intergenic |
ATTCGTATTGTACCTGTTCT+AGG | 0.285927 | 4_3:+12448331 | None:intergenic |
ACCAAAGGAGAGGTTGGATT+TGG | 0.317483 | 4_3:+12452153 | None:intergenic |
AACAGGTGCTGTGGCAATTA+TGG | 0.322321 | 4_3:-12449903 | Msa0630500:intron |
CATGAGCTCAATCAATTTCA+TGG | 0.323792 | 4_3:-12448118 | Msa0630500:exon |
CTCTGGAAGGGCATTGTGCC+AGG | 0.340136 | 4_3:-12450319 | Msa0630500:CDS |
GTTGTAACTCATCTCTTTGC+TGG | 0.342438 | 4_3:-12449434 | Msa0630500:CDS |
TCATGACGACTGTAAACTTT+TGG | 0.356748 | 4_3:+12448136 | None:intergenic |
AGGAAGGAGTTCGAGCTCTA+TGG | 0.375783 | 4_3:-12449675 | Msa0630500:CDS |
GAACGGTTGGAACGATTGCC+AGG | 0.382895 | 4_3:-12450360 | Msa0630500:CDS |
ATCCTAGCCGTCCAAAATTT+GGG | 0.385337 | 4_3:+12448379 | None:intergenic |
ATAGGTTTGTACCATACCTT+TGG | 0.387579 | 4_3:-12450467 | Msa0630500:intron |
TCCAAATCCAACCTCTCCTT+TGG | 0.400574 | 4_3:-12452154 | Msa0630500:CDS |
CCTAAATACAAGGGTATGTT+GGG | 0.402453 | 4_3:-12450382 | Msa0630500:CDS |
CTTCTGCATCATTGTTGCCA+TGG | 0.407471 | 4_3:-12452185 | Msa0630500:exon |
TAGCTATGATCAAGTGAAAC+AGG | 0.413324 | 4_3:-12449596 | Msa0630500:intron |
AATGTTTGTATGGAGGATTA+AGG | 0.415177 | 4_3:-12450285 | Msa0630500:CDS |
TGTATGGAGGATTAAGGATT+GGG | 0.415795 | 4_3:-12450279 | Msa0630500:CDS |
TCTTTGCTGGCCTTGGGGCA+GGG | 0.418333 | 4_3:-12449421 | Msa0630500:CDS |
TGTATTTATAATGGATGCAT+TGG | 0.423755 | 4_3:+12447816 | None:intergenic |
TGGTGTTTCTCAGGGACCTT+TGG | 0.427434 | 4_3:-12448421 | Msa0630500:intron |
ACCTAAATACAAGGGTATGT+TGG | 0.436713 | 4_3:-12450383 | Msa0630500:CDS |
ATTCTAGCTGCATTTACAAC+AGG | 0.436797 | 4_3:-12450091 | Msa0630500:intron |
CGTTTGAGAAATGAGAATTT+GGG | 0.442411 | 4_3:+12452236 | None:intergenic |
ATACCATTTCTCGCTATGTT+GGG | 0.443289 | 4_3:+12449640 | None:intergenic |
TTTAATCATGAGACCTTGAT+CGG | 0.451823 | 4_3:-12447793 | Msa0630500:three_prime_UTR |
GGAGTTCGAGCTCTATGGAC+AGG | 0.453750 | 4_3:-12449670 | Msa0630500:CDS |
CTTCAAAAGCAAGCTGTAGC+TGG | 0.458080 | 4_3:-12450421 | Msa0630500:CDS |
TTGAAGCTGAAGCCTGACTT+TGG | 0.458651 | 4_3:+12450438 | None:intergenic |
GGTGTTCCCAGGCGCTACTC+TGG | 0.458697 | 4_3:-12449821 | Msa0630500:CDS |
TATGTTTCTAACCCTAGAAC+AGG | 0.463935 | 4_3:-12448343 | Msa0630500:intron |
ACCCTTGTATTTAGGTAAAG+AGG | 0.466223 | 4_3:+12450390 | None:intergenic |
CGAGCTCTATGGACAGGGCT+TGG | 0.466721 | 4_3:-12449664 | Msa0630500:CDS |
CTTTGGACACCGCCAAAGTC+AGG | 0.467903 | 4_3:-12450450 | Msa0630500:CDS |
AATACCATTTCTCGCTATGT+TGG | 0.472885 | 4_3:+12449639 | None:intergenic |
CTGCATCGTCAATGTTTGTA+TGG | 0.475127 | 4_3:-12450295 | Msa0630500:CDS |
CCTAGTTGGTAAAATGAAGA+AGG | 0.475185 | 4_3:+12448048 | None:intergenic |
TTATTCGTCAATTGTGAGAC+AGG | 0.478730 | 4_3:-12449786 | Msa0630500:intron |
GGATTTGGAATCTGCAACCA+TGG | 0.482153 | 4_3:+12452168 | None:intergenic |
AACAAAATTGAACCCGATCA+AGG | 0.484003 | 4_3:+12447780 | None:intergenic |
TTCGTATTGTACCTGTTCTA+GGG | 0.485604 | 4_3:+12448332 | None:intergenic |
TTGTATGGAGGATTAAGGAT+TGG | 0.485749 | 4_3:-12450280 | Msa0630500:CDS |
GGAACGATTGCCAGGGAAGA+AGG | 0.491235 | 4_3:-12450352 | Msa0630500:CDS |
GGTCCCAACATAGCGAGAAA+TGG | 0.500921 | 4_3:-12449643 | Msa0630500:CDS |
GCAGGTCAAGTCGAGAATGA+TGG | 0.502235 | 4_3:-12449000 | Msa0630500:intron |
ATTTGGAGAGAATTATTACA+TGG | 0.505186 | 4_3:+12447909 | None:intergenic |
CTTACTTTGACAAGATCAGT+TGG | 0.507478 | 4_3:+12449872 | None:intergenic |
AAGAAGGTCTTTCAGCACTC+TGG | 0.510738 | 4_3:-12450336 | Msa0630500:CDS |
TGTAAGTTGGTTGCATTAGA+CGG | 0.511340 | 4_3:-12452362 | None:intergenic |
GGTTGGACCAAAGGAGAGGT+TGG | 0.513532 | 4_3:+12452147 | None:intergenic |
TCTGGAAGGGCATTGTGCCA+GGG | 0.519541 | 4_3:-12450318 | Msa0630500:CDS |
AATTACCTCCTGGTGTTCCC+AGG | 0.520062 | 4_3:-12449832 | Msa0630500:CDS |
AAACATTGACGATGCAGCCC+TGG | 0.522655 | 4_3:+12450301 | None:intergenic |
GAGTAGCGCCTGGGAACACC+AGG | 0.525220 | 4_3:+12449824 | None:intergenic |
TGCTGAAAGACCTTCTTCCC+TGG | 0.527885 | 4_3:+12450342 | None:intergenic |
ATGTTTGACTACATCCTAGT+TGG | 0.529100 | 4_3:+12448034 | None:intergenic |
AAAGCACTGCTGGCGAAGGT+TGG | 0.533572 | 4_3:+12452130 | None:intergenic |
CAGGTCAAGTCGAGAATGAT+GGG | 0.539474 | 4_3:-12448999 | Msa0630500:CDS |
AAGGGTATGTTGGGAACGGT+TGG | 0.543641 | 4_3:-12450373 | Msa0630500:CDS |
ACATGCGGAGAAAGCACTGC+TGG | 0.548559 | 4_3:+12452120 | None:intergenic |
TCATCTCTTTGCTGGCCTTG+GGG | 0.549269 | 4_3:-12449426 | Msa0630500:CDS |
GCTCAATCAATTTCATGGAG+TGG | 0.550017 | 4_3:-12448113 | Msa0630500:three_prime_UTR |
AAGCTGAAGCCTGACTTTGG+CGG | 0.551365 | 4_3:+12450441 | None:intergenic |
TTCATGGAGTGGTTTCTATG+TGG | 0.552704 | 4_3:-12448102 | Msa0630500:three_prime_UTR |
AGGTCTTTCAGCACTCTGGA+AGG | 0.552750 | 4_3:-12450332 | Msa0630500:CDS |
AATGTATTTCGAAATTGGAA+TGG | 0.553059 | 4_3:+12452294 | None:intergenic |
GGTCTTTCAGCACTCTGGAA+GGG | 0.557130 | 4_3:-12450331 | Msa0630500:CDS |
CAAAGATCCAGAGTAGCGCC+TGG | 0.558547 | 4_3:+12449814 | None:intergenic |
TTAATCATGAGACCTTGATC+GGG | 0.559270 | 4_3:-12447792 | Msa0630500:three_prime_UTR |
TTTGGCGGTGTCCAAAGGTA+TGG | 0.563038 | 4_3:+12450456 | None:intergenic |
CAACAATGATGCAGAAGAAG+AGG | 0.568198 | 4_3:+12452191 | None:intergenic |
GCTGGCGAAGGTTGGACCAA+AGG | 0.569166 | 4_3:+12452138 | None:intergenic |
ATCCTCTTTACCTAAATACA+AGG | 0.571318 | 4_3:-12450392 | Msa0630500:CDS |
GCAGAAGGAAAATTACCTCC+TGG | 0.576611 | 4_3:-12449842 | Msa0630500:CDS |
CTAGTTGGTAAAATGAAGAA+GGG | 0.576985 | 4_3:+12448049 | None:intergenic |
AAAGTAAGACTTCAAGCAGA+AGG | 0.578224 | 4_3:-12449857 | Msa0630500:CDS |
CTGACTTTGGCGGTGTCCAA+AGG | 0.581658 | 4_3:+12450451 | None:intergenic |
TGTTACATCAACAGGTGCTG+TGG | 0.584258 | 4_3:-12449912 | Msa0630500:intron |
TAAGACTTTCTACACGGGGA+AGG | 0.585668 | 4_3:-12450146 | Msa0630500:CDS |
TATCGGCTCCCCAGTTGATG+TGG | 0.593443 | 4_3:-12449384 | Msa0630500:intron |
GGAGAAAGCACTGCTGGCGA+AGG | 0.597374 | 4_3:+12452126 | None:intergenic |
CATCGTCAATGTTTGTATGG+AGG | 0.599547 | 4_3:-12450292 | Msa0630500:CDS |
CAGGTTAAGACTTTCTACAC+GGG | 0.605066 | 4_3:-12450151 | Msa0630500:CDS |
AATGATGCAGAAGAAGAGGA+AGG | 0.622071 | 4_3:+12452195 | None:intergenic |
ATACAAGGGTATGTTGGGAA+CGG | 0.626891 | 4_3:-12450377 | Msa0630500:CDS |
AAAGATCCAGAGTAGCGCCT+GGG | 0.631215 | 4_3:+12449815 | None:intergenic |
GAGTTCGAGCTCTATGGACA+GGG | 0.636887 | 4_3:-12449669 | Msa0630500:CDS |
ACAGTGGAACATCGCCCACA+TGG | 0.638880 | 4_3:+12450122 | None:intergenic |
AATCCTTTATAAAACGCCAA+AGG | 0.640143 | 4_3:+12448405 | None:intergenic |
AACGGTTGGAACGATTGCCA+GGG | 0.640772 | 4_3:-12450359 | Msa0630500:CDS |
AAGAAGAGGAAGGAATCGAA+AGG | 0.645871 | 4_3:+12452205 | None:intergenic |
CGAAGGTTGGACCAAAGGAG+AGG | 0.649225 | 4_3:+12452143 | None:intergenic |
TTTCTCCGCATGTTTCGCTG+AGG | 0.650743 | 4_3:-12452110 | Msa0630500:intron |
ACAGGTTAAGACTTTCTACA+CGG | 0.651442 | 4_3:-12450152 | Msa0630500:intron |
TCCTCTTTACCTAAATACAA+GGG | 0.668803 | 4_3:-12450391 | Msa0630500:CDS |
ACAACATTGTCAGTGAACCC+CGG | 0.669074 | 4_3:+12449452 | None:intergenic |
TAGCGCCTGGGAACACCAGG+AGG | 0.682089 | 4_3:+12449827 | None:intergenic |
CTACACGGGGAAGGACCATG+TGG | 0.686360 | 4_3:-12450137 | Msa0630500:CDS |
AGGTGCTGTGGCAATTATGG+TGG | 0.697754 | 4_3:-12449900 | Msa0630500:CDS |
CATTACCTCAGCGAAACATG+CGG | 0.697882 | 4_3:+12452105 | None:intergenic |
CTAGCCGTCCAAAATTTGGG+AGG | 0.698037 | 4_3:+12448382 | None:intergenic |
TACACGGGGAAGGACCATGT+GGG | 0.703680 | 4_3:-12450136 | Msa0630500:CDS |
AGGTTAAGACTTTCTACACG+GGG | 0.711418 | 4_3:-12450150 | Msa0630500:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATAAAATAAAATAAA+AGG | + | chr4_3:12451617-12451636 | None:intergenic | 0.0% |
!!! | TTATTTTATTTTATTTTTTT+CGG | - | chr4_3:12451618-12451637 | Msa0630500:intron | 0.0% |
!!! | TATTTTTTTTTACCAAAAAT+TGG | + | chr4_3:12448494-12448513 | None:intergenic | 10.0% |
!!! | TAAAAAAGTTCAAATTTTAT+AGG | - | chr4_3:12448698-12448717 | Msa0630500:intron | 10.0% |
!!! | AAAAAAGTTCAAATTTTATA+GGG | - | chr4_3:12448699-12448718 | Msa0630500:intron | 10.0% |
!! | ATGATTAAATGTATTTATAA+TGG | + | chr4_3:12452311-12452330 | None:intergenic | 10.0% |
!! | TAAAGCAATGTAAATAATAA+TGG | + | chr4_3:12448071-12448090 | None:intergenic | 15.0% |
!!! | TTTGTAGTTTTTTTTCTTAT+GGG | + | chr4_3:12448425-12448444 | None:intergenic | 15.0% |
!!! | TTTTGTAGTTTTTTTTCTTA+TGG | + | chr4_3:12448426-12448445 | None:intergenic | 15.0% |
!!! | GAACTTTTTTATTTTGTTTT+TGG | + | chr4_3:12448689-12448708 | None:intergenic | 15.0% |
!! | AAAAAACACTAAAAACAAAA+GGG | + | chr4_3:12448740-12448759 | None:intergenic | 15.0% |
!!! | ATTTATTACTGATTACTTTT+TGG | - | chr4_3:12449523-12449542 | Msa0630500:intron | 15.0% |
!!! | TTTATTACTGATTACTTTTT+GGG | - | chr4_3:12449524-12449543 | Msa0630500:intron | 15.0% |
!!! | TTGAATCTATTTTAATATGT+TGG | - | chr4_3:12450108-12450127 | Msa0630500:CDS | 15.0% |
!!! | TGAATCTATTTTAATATGTT+GGG | - | chr4_3:12450109-12450128 | Msa0630500:CDS | 15.0% |
!!! | ACAAGATACAATTTTTTTTA+AGG | + | chr4_3:12451553-12451572 | None:intergenic | 15.0% |
!! | TAAAAAAAATTGTATCTTGT+TGG | - | chr4_3:12451553-12451572 | Msa0630500:intron | 15.0% |
!!! | TTTATTTTATTTTTTTCGGT+TGG | - | chr4_3:12451622-12451641 | Msa0630500:intron | 15.0% |
!! | TGTATAATGTATTTCGAAAT+TGG | + | chr4_3:12447829-12447848 | None:intergenic | 20.0% |
!!! | TTATTTACATTGCTTTATTG+TGG | - | chr4_3:12448074-12448093 | Msa0630500:three_prime_UTR | 20.0% |
!! | ATCATGTTTGTTTATTCAAA+AGG | - | chr4_3:12448220-12448239 | Msa0630500:intron | 20.0% |
!! | TCATGTTTGTTTATTCAAAA+GGG | - | chr4_3:12448221-12448240 | Msa0630500:intron | 20.0% |
!!! | TTGTAGTTTTTTTTTCTTAG+AGG | - | chr4_3:12448614-12448633 | Msa0630500:intron | 20.0% |
!!! | TGTAGTTTTTTTTTCTTAGA+GGG | - | chr4_3:12448615-12448634 | Msa0630500:intron | 20.0% |
!! | GAAAAAACACTAAAAACAAA+AGG | + | chr4_3:12448741-12448760 | None:intergenic | 20.0% |
!! | TAATTACAACTATAAACCAA+AGG | + | chr4_3:12448844-12448863 | None:intergenic | 20.0% |
!! | TTATAGTTGTAATTAGTCAA+TGG | - | chr4_3:12448849-12448868 | Msa0630500:intron | 20.0% |
!!! | GTTTGTTGTTTCAAATATTT+AGG | - | chr4_3:12448948-12448967 | Msa0630500:CDS | 20.0% |
!! | AGTTTAAAAATAGATTGGAA+AGG | + | chr4_3:12449219-12449238 | None:intergenic | 20.0% |
!!! | AAAGAGTATTCAATTTTATC+AGG | + | chr4_3:12449379-12449398 | None:intergenic | 20.0% |
!! | AACAAAATTCGACATATTTA+AGG | + | chr4_3:12449462-12449481 | None:intergenic | 20.0% |
!!! | TTACTGTTTCATTTTCATAT+TGG | - | chr4_3:12451008-12451027 | Msa0630500:intron | 20.0% |
!!! | TACTGTTTCATTTTCATATT+GGG | - | chr4_3:12451009-12451028 | Msa0630500:intron | 20.0% |
!! | TAAACATACATCATTCTTTA+AGG | + | chr4_3:12451183-12451202 | None:intergenic | 20.0% |
!! | TTAACCTTAATCATCATATT+TGG | - | chr4_3:12451274-12451293 | Msa0630500:intron | 20.0% |
!! | AAAACCAAATATGATGATTA+AGG | + | chr4_3:12451281-12451300 | None:intergenic | 20.0% |
!! | TTGACATATCTAATTGTATT+TGG | - | chr4_3:12451356-12451375 | Msa0630500:intron | 20.0% |
!!! | TTTTTAAAGGCAAATATTAG+TGG | + | chr4_3:12451497-12451516 | None:intergenic | 20.0% |
!!! | GTTAAAGGAAAGTTTTTTAA+AGG | + | chr4_3:12451510-12451529 | None:intergenic | 20.0% |
!!! | TTTTTTAAGGCAAATATTAG+TGG | + | chr4_3:12451540-12451559 | None:intergenic | 20.0% |
!!! | ATTTTGTTTTTCAAAAGCAA+TGG | - | chr4_3:12452350-12452369 | Msa0630500:five_prime_UTR | 20.0% |
!! | ATGGTCAACTATTATTGTTT+TGG | + | chr4_3:12447805-12447824 | None:intergenic | 25.0% |
! | AATGTATTTCGAAATTGGAA+TGG | + | chr4_3:12447824-12447843 | None:intergenic | 25.0% |
! | CTTATATCTAACAAACACTA+GGG | + | chr4_3:12448275-12448294 | None:intergenic | 25.0% |
!! | CTAGTGTTTGTTAGATATAA+GGG | - | chr4_3:12448274-12448293 | Msa0630500:intron | 25.0% |
!!! | CTTGTGAATTAAGCTTTATT+TGG | - | chr4_3:12448770-12448789 | Msa0630500:intron | 25.0% |
! | TAAACCAAAGGTAAAAATAG+TGG | + | chr4_3:12448832-12448851 | None:intergenic | 25.0% |
!! | AAGGATTGTACTTTTCAATT+CGG | - | chr4_3:12448922-12448941 | Msa0630500:intron | 25.0% |
!!! | TGTTGTTTCAAATATTTAGG+TGG | - | chr4_3:12448951-12448970 | Msa0630500:CDS | 25.0% |
!! | TTCAAATATTTAGGTGGATT+AGG | - | chr4_3:12448957-12448976 | Msa0630500:CDS | 25.0% |
! | ACATGTTGGAATTAAATTGT+TGG | - | chr4_3:12449014-12449033 | Msa0630500:intron | 25.0% |
! | TCAGGAGTTTAAAAATAGAT+TGG | + | chr4_3:12449224-12449243 | None:intergenic | 25.0% |
!!! | TATTTTTAAACTCCTGAAGA+AGG | - | chr4_3:12449227-12449246 | Msa0630500:intron | 25.0% |
! | TTTAGATGATAGGAAATGAA+GGG | + | chr4_3:12449288-12449307 | None:intergenic | 25.0% |
! | ATTTAGATGATAGGAAATGA+AGG | + | chr4_3:12449289-12449308 | None:intergenic | 25.0% |
!!! | ACATGCAGATATAGTTTTAT+TGG | - | chr4_3:12449326-12449345 | Msa0630500:intron | 25.0% |
!!! | TTTTATTGGTTGAACTTTGT+TGG | - | chr4_3:12449340-12449359 | Msa0630500:intron | 25.0% |
! | TTATTTATCTGTGAATAGCA+TGG | - | chr4_3:12449934-12449953 | Msa0630500:intron | 25.0% |
! | AGAAAACACAAATACATGTT+AGG | + | chr4_3:12450149-12450168 | None:intergenic | 25.0% |
! | TCTCTTTCATAAATCATGTT+AGG | + | chr4_3:12450368-12450387 | None:intergenic | 25.0% |
! | CAGGTAATTTATAGTATTAC+TGG | - | chr4_3:12450538-12450557 | Msa0630500:intron | 25.0% |
! | TAAAAATTACCACATCAACT+GGG | + | chr4_3:12450743-12450762 | None:intergenic | 25.0% |
! | TTAAAAATTACCACATCAAC+TGG | + | chr4_3:12450744-12450763 | None:intergenic | 25.0% |
! | GAACAGAATTATTAGTAGAA+AGG | + | chr4_3:12451074-12451093 | None:intergenic | 25.0% |
! | AGAACATCAATCATCATATT+TGG | - | chr4_3:12451231-12451250 | Msa0630500:intron | 25.0% |
!!! | TCAATCATCATATTTGGTTT+TGG | - | chr4_3:12451237-12451256 | Msa0630500:intron | 25.0% |
! | TTTATGCATCTTAACAGAAA+AGG | + | chr4_3:12451330-12451349 | None:intergenic | 25.0% |
!!! | TGAAAGATGTTTTAAGAATG+AGG | - | chr4_3:12451417-12451436 | Msa0630500:intron | 25.0% |
!!! | GTTTCTCTTCTTTGTTATTT+CGG | - | chr4_3:12451817-12451836 | Msa0630500:intron | 25.0% |
!!! | AATGCATTTTTTGGAGTATA+TGG | + | chr4_3:12451861-12451880 | None:intergenic | 25.0% |
!! | ATACTCCAAAAAATGCATTT+TGG | - | chr4_3:12451862-12451881 | Msa0630500:intron | 25.0% |
!! | TACTCCAAAAAATGCATTTT+GGG | - | chr4_3:12451863-12451882 | Msa0630500:intron | 25.0% |
!!! | TAGTCAAACATTTTTTTCAG+AGG | - | chr4_3:12452093-12452112 | Msa0630500:intron | 25.0% |
! | ATTTGGAGAGAATTATTACA+TGG | + | chr4_3:12452209-12452228 | None:intergenic | 25.0% |
!!! | GATTCTTTTCAAATTTGTTG+TGG | - | chr4_3:12452263-12452282 | Msa0630500:five_prime_UTR | 25.0% |
!!! | TGTATTTATAATGGATGCAT+TGG | + | chr4_3:12452302-12452321 | None:intergenic | 25.0% |
! | AATTTTCTTATGCAGCGATT+AGG | + | chr4_3:12447781-12447800 | None:intergenic | 30.0% |
CGTTTGAGAAATGAGAATTT+GGG | + | chr4_3:12447882-12447901 | None:intergenic | 30.0% | |
!! | TTGCTTTATTGTGGTTTTCA+TGG | - | chr4_3:12448083-12448102 | Msa0630500:three_prime_UTR | 30.0% |
! | TGATCAAGTGAACAATTTTG+TGG | - | chr4_3:12448186-12448205 | Msa0630500:intron | 30.0% |
! | AAAAGGGTTAACCTCAATTT+TGG | - | chr4_3:12448237-12448256 | Msa0630500:intron | 30.0% |
! | AAAGGGTTAACCTCAATTTT+GGG | - | chr4_3:12448238-12448257 | Msa0630500:intron | 30.0% |
GTGTTAAATTCCCAAAATTG+AGG | + | chr4_3:12448251-12448270 | None:intergenic | 30.0% | |
CCTTATATCTAACAAACACT+AGG | + | chr4_3:12448276-12448295 | None:intergenic | 30.0% | |
! | CCTAGTGTTTGTTAGATATA+AGG | - | chr4_3:12448273-12448292 | Msa0630500:intron | 30.0% |
GATTTGTAGTAGTGACTAAA+AGG | - | chr4_3:12448327-12448346 | Msa0630500:intron | 30.0% | |
!!! | TTTTACCAAAAATTGGCCTT+GGG | + | chr4_3:12448487-12448506 | None:intergenic | 30.0% |
!! | TTTTTACCAAAAATTGGCCT+TGG | + | chr4_3:12448488-12448507 | None:intergenic | 30.0% |
!!! | TACTCCACTATTTTTACCTT+TGG | - | chr4_3:12448825-12448844 | Msa0630500:intron | 30.0% |
TAGTTGTAATTAGTCAATGG+TGG | - | chr4_3:12448852-12448871 | Msa0630500:intron | 30.0% | |
! | AGGATTGTACTTTTCAATTC+GGG | - | chr4_3:12448923-12448942 | Msa0630500:intron | 30.0% |
! | ATGGATTGTAATGATCTGTA+TGG | - | chr4_3:12449051-12449070 | Msa0630500:intron | 30.0% |
ATTGTAATGATCTGTATGGA+TGG | - | chr4_3:12449055-12449074 | Msa0630500:intron | 30.0% | |
!!! | GATGGTATAGGATGTTTTTT+TGG | - | chr4_3:12449073-12449092 | Msa0630500:intron | 30.0% |
!!! | TAGGATGTTTTTTTGGTGAA+TGG | - | chr4_3:12449080-12449099 | Msa0630500:intron | 30.0% |
! | CTTTGATAATCTTCCGAATA+GGG | + | chr4_3:12449137-12449156 | None:intergenic | 30.0% |
CTATTCGGAAGATTATCAAA+GGG | - | chr4_3:12449136-12449155 | Msa0630500:intron | 30.0% | |
AGATTATCAAAGGGACAAAA+TGG | - | chr4_3:12449145-12449164 | Msa0630500:intron | 30.0% | |
TTAGATGATAGGAAATGAAG+GGG | + | chr4_3:12449287-12449306 | None:intergenic | 30.0% | |
ATCCTCTTTACCTAAATACA+AGG | - | chr4_3:12449723-12449742 | Msa0630500:intron | 30.0% | |
TCCTCTTTACCTAAATACAA+GGG | - | chr4_3:12449724-12449743 | Msa0630500:intron | 30.0% | |
AATGTTTGTATGGAGGATTA+AGG | - | chr4_3:12449830-12449849 | Msa0630500:CDS | 30.0% | |
GTAACAAATTGAAGAGTTGT+AGG | + | chr4_3:12450189-12450208 | None:intergenic | 30.0% | |
!! | CTTCAATTTGTTACATCAAC+AGG | - | chr4_3:12450195-12450214 | Msa0630500:intron | 30.0% |
AAAATCTGCATTTAACACTC+AGG | - | chr4_3:12450420-12450439 | Msa0630500:CDS | 30.0% | |
! | AGTATTCGTTTTGTAGACAA+TGG | - | chr4_3:12450588-12450607 | Msa0630500:intron | 30.0% |
!! | GCAGACTATTTTGAAAATTC+CGG | - | chr4_3:12450644-12450663 | Msa0630500:intron | 30.0% |
!! | CAGACTATTTTGAAAATTCC+GGG | - | chr4_3:12450645-12450664 | Msa0630500:intron | 30.0% |
!! | AGACTATTTTGAAAATTCCG+GGG | - | chr4_3:12450646-12450665 | Msa0630500:intron | 30.0% |
AAAAATTACCACATCAACTG+GGG | + | chr4_3:12450742-12450761 | None:intergenic | 30.0% | |
! | CTACATAGACATTATTGACT+TGG | - | chr4_3:12450771-12450790 | Msa0630500:intron | 30.0% |
ATCTAATCATGGTTCGATTA+GGG | + | chr4_3:12450856-12450875 | None:intergenic | 30.0% | |
TATCTAATCATGGTTCGATT+AGG | + | chr4_3:12450857-12450876 | None:intergenic | 30.0% | |
TACCATTGTGTAATCATTCT+GGG | + | chr4_3:12450885-12450904 | None:intergenic | 30.0% | |
! | ATTCTGTTCTATCTTCCTTT+TGG | - | chr4_3:12451085-12451104 | Msa0630500:intron | 30.0% |
ATGATTGATGTTCTTAACAG+AGG | + | chr4_3:12451225-12451244 | None:intergenic | 30.0% | |
ATTAGTGGTAAGTCTGTTAA+AGG | + | chr4_3:12451482-12451501 | None:intergenic | 30.0% | |
!! | ATTAGTGGTTAGTCTGTTAA+AGG | + | chr4_3:12451525-12451544 | None:intergenic | 30.0% |
GTATAATACACAATCTTAGC+AGG | - | chr4_3:12451575-12451594 | Msa0630500:intron | 30.0% | |
TGTCCTTTATCATTACTGAT+TGG | - | chr4_3:12451661-12451680 | Msa0630500:intron | 30.0% | |
AATCCTTTATAAAACGCCAA+AGG | + | chr4_3:12451713-12451732 | None:intergenic | 30.0% | |
!! | CTAGTTGGTAAAATGAAGAA+GGG | + | chr4_3:12452069-12452088 | None:intergenic | 30.0% |
AGAACGTTCGTAGTTAAATT+TGG | + | chr4_3:12452226-12452245 | None:intergenic | 30.0% | |
AATTTAACTACGAACGTTCT+TGG | - | chr4_3:12452226-12452245 | Msa0630500:five_prime_UTR | 30.0% | |
TTTAATCATGAGACCTTGAT+CGG | - | chr4_3:12452322-12452341 | Msa0630500:five_prime_UTR | 30.0% | |
GCGTTTGAGAAATGAGAATT+TGG | + | chr4_3:12447883-12447902 | None:intergenic | 35.0% | |
GTTATTATCCTGTGTAGTGT+AGG | - | chr4_3:12448032-12448051 | Msa0630500:three_prime_UTR | 35.0% | |
GCTTGTTCTAATTTCTTCTG+TGG | - | chr4_3:12448140-12448159 | Msa0630500:CDS | 35.0% | |
TGTTAGATATAAGGGATGTG+AGG | - | chr4_3:12448282-12448301 | Msa0630500:intron | 35.0% | |
GTTAGATATAAGGGATGTGA+GGG | - | chr4_3:12448283-12448302 | Msa0630500:intron | 35.0% | |
TGCTACAGTTGCAAAACTTA+GGG | + | chr4_3:12448454-12448473 | None:intergenic | 35.0% | |
!! | TTTACCAAAAATTGGCCTTG+GGG | + | chr4_3:12448486-12448505 | None:intergenic | 35.0% |
! | AAATAGTGGAGTAATGTGTC+TGG | + | chr4_3:12448818-12448837 | None:intergenic | 35.0% |
! | GTCTGGTTTGATGAAATGAA+AGG | - | chr4_3:12448903-12448922 | Msa0630500:intron | 35.0% |
! | GTTTTCTTTTCCATCCTTGT+TGG | - | chr4_3:12448981-12449000 | Msa0630500:CDS | 35.0% |
ATGTGCAATACAAACCAACA+AGG | + | chr4_3:12448998-12449017 | None:intergenic | 35.0% | |
!! | TTGGTTTGTATTGCACATGT+TGG | - | chr4_3:12449000-12449019 | Msa0630500:intron | 35.0% |
GTTGGACAAAATGTTTGACA+TGG | - | chr4_3:12449032-12449051 | Msa0630500:intron | 35.0% | |
ATGATCTGTATGGATGGTAT+AGG | - | chr4_3:12449061-12449080 | Msa0630500:intron | 35.0% | |
!!! | GATGTTTTTTTGGTGAATGG+AGG | - | chr4_3:12449083-12449102 | Msa0630500:intron | 35.0% |
TAGTTATCGTTCACCCTATT+CGG | - | chr4_3:12449121-12449140 | Msa0630500:intron | 35.0% | |
! | CCTTTGATAATCTTCCGAAT+AGG | + | chr4_3:12449138-12449157 | None:intergenic | 35.0% |
CCTATTCGGAAGATTATCAA+AGG | - | chr4_3:12449135-12449154 | Msa0630500:intron | 35.0% | |
TAAAGGGAATGAATGGAAAG+GGG | + | chr4_3:12449260-12449279 | None:intergenic | 35.0% | |
GTAAAGGGAATGAATGGAAA+GGG | + | chr4_3:12449261-12449280 | None:intergenic | 35.0% | |
TGTAAAGGGAATGAATGGAA+AGG | + | chr4_3:12449262-12449281 | None:intergenic | 35.0% | |
GAAATGAAGGGGAATGTAAA+GGG | + | chr4_3:12449276-12449295 | None:intergenic | 35.0% | |
GCATGCTGTATTTAGATGAT+AGG | + | chr4_3:12449298-12449317 | None:intergenic | 35.0% | |
! | TGAAAACAGCTTTTGCATTG+TGG | - | chr4_3:12449413-12449432 | Msa0630500:CDS | 35.0% |
GACGTTCTTGTGATTGATAT+AGG | - | chr4_3:12449630-12449649 | Msa0630500:CDS | 35.0% | |
ATAGGTTTGTACCATACCTT+TGG | - | chr4_3:12449648-12449667 | Msa0630500:CDS | 35.0% | |
ACCCTTGTATTTAGGTAAAG+AGG | + | chr4_3:12449728-12449747 | None:intergenic | 35.0% | |
! | ACCTAAATACAAGGGTATGT+TGG | - | chr4_3:12449732-12449751 | Msa0630500:intron | 35.0% |
! | CCTAAATACAAGGGTATGTT+GGG | - | chr4_3:12449733-12449752 | Msa0630500:intron | 35.0% |
TTGTATGGAGGATTAAGGAT+TGG | - | chr4_3:12449835-12449854 | Msa0630500:CDS | 35.0% | |
TGTATGGAGGATTAAGGATT+GGG | - | chr4_3:12449836-12449855 | Msa0630500:CDS | 35.0% | |
AACAAAGATTCGAATCTCAC+AGG | + | chr4_3:12449871-12449890 | None:intergenic | 35.0% | |
TGAATAGCATGGTGATTAAC+AGG | - | chr4_3:12449945-12449964 | Msa0630500:intron | 35.0% | |
ACAGGTTAAGACTTTCTACA+CGG | - | chr4_3:12449963-12449982 | Msa0630500:intron | 35.0% | |
! | GCTAGAATTTTCTTTGACAG+TGG | + | chr4_3:12450012-12450031 | None:intergenic | 35.0% |
! | ATTCTAGCTGCATTTACAAC+AGG | - | chr4_3:12450024-12450043 | Msa0630500:intron | 35.0% |
! | TCAATTCTGGAAGTTGTTGT+GGG | - | chr4_3:12450053-12450072 | Msa0630500:intron | 35.0% |
TAGATTCAAATCAGAGCACA+CGG | + | chr4_3:12450097-12450116 | None:intergenic | 35.0% | |
CTTACTTTGACAAGATCAGT+TGG | + | chr4_3:12450246-12450265 | None:intergenic | 35.0% | |
AAAGTAAGACTTCAAGCAGA+AGG | - | chr4_3:12450258-12450277 | Msa0630500:intron | 35.0% | |
TTATTCGTCAATTGTGAGAC+AGG | - | chr4_3:12450329-12450348 | Msa0630500:CDS | 35.0% | |
ATACCATTTCTCGCTATGTT+GGG | + | chr4_3:12450478-12450497 | None:intergenic | 35.0% | |
AATACCATTTCTCGCTATGT+TGG | + | chr4_3:12450479-12450498 | None:intergenic | 35.0% | |
TAGCTATGATCAAGTGAAAC+AGG | - | chr4_3:12450519-12450538 | Msa0630500:intron | 35.0% | |
TCTAATCATGGTTCGATTAG+GGG | + | chr4_3:12450855-12450874 | None:intergenic | 35.0% | |
CTGGGATTCTTATCTAATCA+TGG | + | chr4_3:12450867-12450886 | None:intergenic | 35.0% | |
ATCCCAGAATGATTACACAA+TGG | - | chr4_3:12450880-12450899 | Msa0630500:intron | 35.0% | |
CTACCATTGTGTAATCATTC+TGG | + | chr4_3:12450886-12450905 | None:intergenic | 35.0% | |
GATCTCTTTATGGTCCATTA+AGG | - | chr4_3:12450962-12450981 | Msa0630500:intron | 35.0% | |
TCTTTATGGTCCATTAAGGT+GGG | - | chr4_3:12450966-12450985 | Msa0630500:intron | 35.0% | |
TATATACATCCCCACCTTAA+TGG | + | chr4_3:12450979-12450998 | None:intergenic | 35.0% | |
!! | GGTTTTGACAAAGCAATCAA+GGG | + | chr4_3:12451162-12451181 | None:intergenic | 35.0% |
!! | AGGTTTTGACAAAGCAATCA+AGG | + | chr4_3:12451163-12451182 | None:intergenic | 35.0% |
ACAGAGGAAAATAGTAACAG+AGG | + | chr4_3:12451209-12451228 | None:intergenic | 35.0% | |
!!! | ATGTTTTAAGAATGAGGTCC+AGG | - | chr4_3:12451423-12451442 | Msa0630500:intron | 35.0% |
!!! | TGTTTTAAGAATGAGGTCCA+GGG | - | chr4_3:12451424-12451443 | Msa0630500:intron | 35.0% |
GGTAAGTCTGTTAAAGGAAA+GGG | + | chr4_3:12451476-12451495 | None:intergenic | 35.0% | |
TGGTAAGTCTGTTAAAGGAA+AGG | + | chr4_3:12451477-12451496 | None:intergenic | 35.0% | |
CAGCCAATCAGTAATGATAA+AGG | + | chr4_3:12451667-12451686 | None:intergenic | 35.0% | |
! | TACTGATTGGCTGTGTAATT+TGG | - | chr4_3:12451674-12451693 | Msa0630500:intron | 35.0% |
!! | TGTGTAATTTGGTGTTTCTC+AGG | - | chr4_3:12451685-12451704 | Msa0630500:intron | 35.0% |
!! | GTGTAATTTGGTGTTTCTCA+GGG | - | chr4_3:12451686-12451705 | Msa0630500:intron | 35.0% |
! | AAAGGATTCCTCCCAAATTT+TGG | - | chr4_3:12451725-12451744 | Msa0630500:intron | 35.0% |
! | TATGTTTCTAACCCTAGAAC+AGG | - | chr4_3:12451772-12451791 | Msa0630500:intron | 35.0% |
TTCGTATTGTACCTGTTCTA+GGG | + | chr4_3:12451786-12451805 | None:intergenic | 35.0% | |
ATTCGTATTGTACCTGTTCT+AGG | + | chr4_3:12451787-12451806 | None:intergenic | 35.0% | |
!!! | CAGACCCAAAATGCATTTTT+TGG | + | chr4_3:12451870-12451889 | None:intergenic | 35.0% |
!! | AAATGCATTTTGGGTCTGTT+TGG | - | chr4_3:12451872-12451891 | Msa0630500:intron | 35.0% |
!! | AATGCATTTTGGGTCTGTTT+GGG | - | chr4_3:12451873-12451892 | Msa0630500:intron | 35.0% |
! | TCATGACGACTGTAAACTTT+TGG | + | chr4_3:12451982-12452001 | None:intergenic | 35.0% |
CATGAGCTCAATCAATTTCA+TGG | - | chr4_3:12451997-12452016 | Msa0630500:intron | 35.0% | |
!!! | GGACATTTTTAGTACGAACT+AGG | - | chr4_3:12452034-12452053 | Msa0630500:intron | 35.0% |
!! | CCTAGTTGGTAAAATGAAGA+AGG | + | chr4_3:12452070-12452089 | None:intergenic | 35.0% |
! | CCTTCTTCATTTTACCAACT+AGG | - | chr4_3:12452067-12452086 | Msa0630500:intron | 35.0% |
ATGTTTGACTACATCCTAGT+TGG | + | chr4_3:12452084-12452103 | None:intergenic | 35.0% | |
TTAATCATGAGACCTTGATC+GGG | - | chr4_3:12452323-12452342 | Msa0630500:five_prime_UTR | 35.0% | |
AACAAAATTGAACCCGATCA+AGG | + | chr4_3:12452338-12452357 | None:intergenic | 35.0% | |
AAGAAGAGGAAGGAATCGAA+AGG | + | chr4_3:12447913-12447932 | None:intergenic | 40.0% | |
AATGATGCAGAAGAAGAGGA+AGG | + | chr4_3:12447923-12447942 | None:intergenic | 40.0% | |
CAACAATGATGCAGAAGAAG+AGG | + | chr4_3:12447927-12447946 | None:intergenic | 40.0% | |
ACTATACTCCTACACTACAC+AGG | + | chr4_3:12448043-12448062 | None:intergenic | 40.0% | |
TCGCAACTTCGTGAAAGTTA+GGG | + | chr4_3:12448396-12448415 | None:intergenic | 40.0% | |
ATCGCAACTTCGTGAAAGTT+AGG | + | chr4_3:12448397-12448416 | None:intergenic | 40.0% | |
! | CTTTCACGAAGTTGCGATTT+TGG | - | chr4_3:12448399-12448418 | Msa0630500:CDS | 40.0% |
CTACAGTTGCAAAACTTAGG+GGG | + | chr4_3:12448452-12448471 | None:intergenic | 40.0% | |
GCTACAGTTGCAAAACTTAG+GGG | + | chr4_3:12448453-12448472 | None:intergenic | 40.0% | |
CTGCTACAGTTGCAAAACTT+AGG | + | chr4_3:12448455-12448474 | None:intergenic | 40.0% | |
!! | TTACCAAAAATTGGCCTTGG+GGG | + | chr4_3:12448485-12448504 | None:intergenic | 40.0% |
ACCGAGTCAAAATTGGCATT+GGG | - | chr4_3:12448552-12448571 | Msa0630500:intron | 40.0% | |
! | CTTTCCCAAAGTTGCGATTT+TGG | + | chr4_3:12448641-12448660 | None:intergenic | 40.0% |
! | TCGCAACTTTGGGAAAGTTA+AGG | - | chr4_3:12448644-12448663 | Msa0630500:intron | 40.0% |
! | CGCAACTTTGGGAAAGTTAA+GGG | - | chr4_3:12448645-12448664 | Msa0630500:intron | 40.0% |
! | GCAACTTTGGGAAAGTTAAG+GGG | - | chr4_3:12448646-12448665 | Msa0630500:intron | 40.0% |
GCAATACAAACCAACAAGGA+TGG | + | chr4_3:12448994-12449013 | None:intergenic | 40.0% | |
!! | TTTTTGGTGAATGGAGGAGA+AGG | - | chr4_3:12449089-12449108 | Msa0630500:intron | 40.0% |
GAATAGGGTGAACGATAACT+AGG | + | chr4_3:12449122-12449141 | None:intergenic | 40.0% | |
AAAGGGAATGAATGGAAAGG+GGG | + | chr4_3:12449259-12449278 | None:intergenic | 40.0% | |
GGGAATGTAAAGGGAATGAA+TGG | + | chr4_3:12449267-12449286 | None:intergenic | 40.0% | |
GGAAATGAAGGGGAATGTAA+AGG | + | chr4_3:12449277-12449296 | None:intergenic | 40.0% | |
! | AACAGCTTTTGCATTGTGGT+TGG | - | chr4_3:12449417-12449436 | Msa0630500:CDS | 40.0% |
TGTTCCTGAGTTGCTATCAA+TGG | - | chr4_3:12449478-12449497 | Msa0630500:intron | 40.0% | |
! | ATCTCCATTGATAGCAACTC+AGG | + | chr4_3:12449485-12449504 | None:intergenic | 40.0% |
CCCAACATACCCTTGTATTT+AGG | + | chr4_3:12449736-12449755 | None:intergenic | 40.0% | |
! | ATACAAGGGTATGTTGGGAA+CGG | - | chr4_3:12449738-12449757 | Msa0630500:intron | 40.0% |
CTGCATCGTCAATGTTTGTA+TGG | - | chr4_3:12449820-12449839 | Msa0630500:CDS | 40.0% | |
CATCGTCAATGTTTGTATGG+AGG | - | chr4_3:12449823-12449842 | Msa0630500:CDS | 40.0% | |
CAGGTTAAGACTTTCTACAC+GGG | - | chr4_3:12449964-12449983 | Msa0630500:intron | 40.0% | |
AGGTTAAGACTTTCTACACG+GGG | - | chr4_3:12449965-12449984 | Msa0630500:intron | 40.0% | |
CAACAGGTATAGCTCAATTC+TGG | - | chr4_3:12450040-12450059 | Msa0630500:intron | 40.0% | |
! | CTCAATTCTGGAAGTTGTTG+TGG | - | chr4_3:12450052-12450071 | Msa0630500:intron | 40.0% |
AGTTGTAGGCAGTAGTATCA+AGG | + | chr4_3:12450175-12450194 | None:intergenic | 40.0% | |
TCTGCATTTAACACTCAGGA+AGG | - | chr4_3:12450424-12450443 | Msa0630500:CDS | 40.0% | |
GTTGTAACTCATCTCTTTGC+TGG | - | chr4_3:12450681-12450700 | Msa0630500:intron | 40.0% | |
CTAATCATGGTTCGATTAGG+GGG | + | chr4_3:12450854-12450873 | None:intergenic | 40.0% | |
GACAACAGCTGATCTCTTTA+TGG | - | chr4_3:12450952-12450971 | Msa0630500:intron | 40.0% | |
CTCTTTATGGTCCATTAAGG+TGG | - | chr4_3:12450965-12450984 | Msa0630500:intron | 40.0% | |
CTTTATGGTCCATTAAGGTG+GGG | - | chr4_3:12450967-12450986 | Msa0630500:intron | 40.0% | |
! | CTTCCTTTTGGTGAATATGC+AGG | - | chr4_3:12451097-12451116 | Msa0630500:intron | 40.0% |
TGACCTGCATATTCACCAAA+AGG | + | chr4_3:12451103-12451122 | None:intergenic | 40.0% | |
!!! | GTTTTAAGAATGAGGTCCAG+GGG | - | chr4_3:12451425-12451444 | Msa0630500:intron | 40.0% |
!! | TTCGGTTGGTTTACCTTCAA+AGG | - | chr4_3:12451636-12451655 | Msa0630500:intron | 40.0% |
!! | TCGGTTGGTTTACCTTCAAA+GGG | - | chr4_3:12451637-12451656 | Msa0630500:intron | 40.0% |
! | GGACCTTTGGCGTTTTATAA+AGG | - | chr4_3:12451707-12451726 | Msa0630500:intron | 40.0% |
! | GATTCCTCCCAAATTTTGGA+CGG | - | chr4_3:12451729-12451748 | Msa0630500:intron | 40.0% |
ATCCTAGCCGTCCAAAATTT+GGG | + | chr4_3:12451739-12451758 | None:intergenic | 40.0% | |
GCTCAATCAATTTCATGGAG+TGG | - | chr4_3:12452002-12452021 | Msa0630500:intron | 40.0% | |
TTCATGGAGTGGTTTCTATG+TGG | - | chr4_3:12452013-12452032 | Msa0630500:intron | 40.0% | |
CTTCTGCATCATTGTTGCCA+TGG | - | chr4_3:12447930-12447949 | Msa0630500:three_prime_UTR | 45.0% | |
! | GGATTTGGAATCTGCAACCA+TGG | + | chr4_3:12447950-12447969 | None:intergenic | 45.0% |
TCCAAATCCAACCTCTCCTT+TGG | - | chr4_3:12447961-12447980 | Msa0630500:three_prime_UTR | 45.0% | |
ACCAAAGGAGAGGTTGGATT+TGG | + | chr4_3:12447965-12447984 | None:intergenic | 45.0% | |
CATTACCTCAGCGAAACATG+CGG | + | chr4_3:12448013-12448032 | None:intergenic | 45.0% | |
GCAACTTCGTGAAAGTTAGG+GGG | + | chr4_3:12448394-12448413 | None:intergenic | 45.0% | |
CGCAACTTCGTGAAAGTTAG+GGG | + | chr4_3:12448395-12448414 | None:intergenic | 45.0% | |
!! | TACCAAAAATTGGCCTTGGG+GGG | + | chr4_3:12448484-12448503 | None:intergenic | 45.0% |
TAACACGTGTCACCTCACTT+AGG | - | chr4_3:12448512-12448531 | Msa0630500:intron | 45.0% | |
AACACGTGTCACCTCACTTA+GGG | - | chr4_3:12448513-12448532 | Msa0630500:intron | 45.0% | |
AGCGTAGACCGAGTCAAAAT+TGG | - | chr4_3:12448545-12448564 | Msa0630500:intron | 45.0% | |
GACCGAGTCAAAATTGGCAT+TGG | - | chr4_3:12448551-12448570 | Msa0630500:intron | 45.0% | |
!!! | CCCCAATGCCAATTTTGACT+CGG | + | chr4_3:12448556-12448575 | None:intergenic | 45.0% |
CCGAGTCAAAATTGGCATTG+GGG | - | chr4_3:12448553-12448572 | Msa0630500:intron | 45.0% | |
! | CGAGTCAAAATTGGCATTGG+GGG | - | chr4_3:12448554-12448573 | Msa0630500:intron | 45.0% |
! | TTTTGCACCTGTGGCAGTTT+TGG | + | chr4_3:12448580-12448599 | None:intergenic | 45.0% |
TGCCACAGGTGCAAAACTTA+GGG | - | chr4_3:12448584-12448603 | Msa0630500:intron | 45.0% | |
AGGGCCAAAATCGCAACTTT+GGG | - | chr4_3:12448634-12448653 | Msa0630500:intron | 45.0% | |
GTGGAGTAATGTGTCTGGTT+CGG | + | chr4_3:12448813-12448832 | None:intergenic | 45.0% | |
TCAATGGTGGTCAGTCACAA+TGG | - | chr4_3:12448865-12448884 | Msa0630500:intron | 45.0% | |
CAATGGTGGTCAGTCACAAT+GGG | - | chr4_3:12448866-12448885 | Msa0630500:intron | 45.0% | |
GGAAAGGATCAGAATCGACT+GGG | + | chr4_3:12449203-12449222 | None:intergenic | 45.0% | |
TGGAAAGGATCAGAATCGAC+TGG | + | chr4_3:12449204-12449223 | None:intergenic | 45.0% | |
TTGAAGCTGAAGCCTGACTT+TGG | + | chr4_3:12449680-12449699 | None:intergenic | 45.0% | |
CTTCAAAAGCAAGCTGTAGC+TGG | - | chr4_3:12449694-12449713 | Msa0630500:intron | 45.0% | |
AAGAAGGTCTTTCAGCACTC+TGG | - | chr4_3:12449779-12449798 | Msa0630500:intron | 45.0% | |
TAAGACTTTCTACACGGGGA+AGG | - | chr4_3:12449969-12449988 | Msa0630500:intron | 45.0% | |
ATTCAAATCAGAGCACACGG+TGG | + | chr4_3:12450094-12450113 | None:intergenic | 45.0% | |
! | TGTTACATCAACAGGTGCTG+TGG | - | chr4_3:12450203-12450222 | Msa0630500:intron | 45.0% |
! | AACAGGTGCTGTGGCAATTA+TGG | - | chr4_3:12450212-12450231 | Msa0630500:intron | 45.0% |
GCAGAAGGAAAATTACCTCC+TGG | - | chr4_3:12450273-12450292 | Msa0630500:CDS | 45.0% | |
ACAACATTGTCAGTGAACCC+CGG | + | chr4_3:12450666-12450685 | None:intergenic | 45.0% | |
! | GGGTTTTTCGCTGTCTGTAT+CGG | - | chr4_3:12450714-12450733 | Msa0630500:intron | 45.0% |
CAGGTCAAGTCGAGAATGAT+GGG | - | chr4_3:12451116-12451135 | Msa0630500:intron | 45.0% | |
GATAAAGGACAGCCCTTTGA+AGG | + | chr4_3:12451652-12451671 | None:intergenic | 45.0% | |
GATCCTAGCCGTCCAAAATT+TGG | + | chr4_3:12451740-12451759 | None:intergenic | 45.0% | |
! | ATTTTGGACGGCTAGGATCT+TGG | - | chr4_3:12451741-12451760 | Msa0630500:intron | 45.0% |
CTCACATGTTTCTCTCATGC+AGG | - | chr4_3:12451944-12451963 | Msa0630500:intron | 45.0% | |
TTTCTCCGCATGTTTCGCTG+AGG | - | chr4_3:12448005-12448024 | Msa0630500:three_prime_UTR | 50.0% | |
CAGTTGCAAAACTTAGGGGG+CGG | + | chr4_3:12448449-12448468 | None:intergenic | 50.0% | |
CTGCCACAGGTGCAAAACTT+AGG | - | chr4_3:12448583-12448602 | Msa0630500:intron | 50.0% | |
GCCACAGGTGCAAAACTTAG+GGG | - | chr4_3:12448585-12448604 | Msa0630500:intron | 50.0% | |
CCACAGGTGCAAAACTTAGG+GGG | - | chr4_3:12448586-12448605 | Msa0630500:intron | 50.0% | |
GAGGGCCAAAATCGCAACTT+TGG | - | chr4_3:12448633-12448652 | Msa0630500:intron | 50.0% | |
!! | ACAATGGGTGTTGACTGCTC+TGG | - | chr4_3:12448881-12448900 | Msa0630500:intron | 50.0% |
CGGAGGAAACTCAAGGGTAA+TGG | + | chr4_3:12449175-12449194 | None:intergenic | 50.0% | |
GTGGAACGGAGGAAACTCAA+GGG | + | chr4_3:12449181-12449200 | None:intergenic | 50.0% | |
TCAGAATCGACTGGGTGGAA+CGG | + | chr4_3:12449195-12449214 | None:intergenic | 50.0% | |
AAGGATCAGAATCGACTGGG+TGG | + | chr4_3:12449200-12449219 | None:intergenic | 50.0% | |
AGGGGGAAAGTTCCTTCTTC+AGG | + | chr4_3:12449242-12449261 | None:intergenic | 50.0% | |
TTTGGCGGTGTCCAAAGGTA+TGG | + | chr4_3:12449662-12449681 | None:intergenic | 50.0% | |
AAGCTGAAGCCTGACTTTGG+CGG | + | chr4_3:12449677-12449696 | None:intergenic | 50.0% | |
! | AAGGGTATGTTGGGAACGGT+TGG | - | chr4_3:12449742-12449761 | Msa0630500:intron | 50.0% |
AACGGTTGGAACGATTGCCA+GGG | - | chr4_3:12449756-12449775 | Msa0630500:intron | 50.0% | |
TGCTGAAAGACCTTCTTCCC+TGG | + | chr4_3:12449776-12449795 | None:intergenic | 50.0% | |
AGGTCTTTCAGCACTCTGGA+AGG | - | chr4_3:12449783-12449802 | Msa0630500:intron | 50.0% | |
! | GGTCTTTCAGCACTCTGGAA+GGG | - | chr4_3:12449784-12449803 | Msa0630500:intron | 50.0% |
AAACATTGACGATGCAGCCC+TGG | + | chr4_3:12449817-12449836 | None:intergenic | 50.0% | |
! | AGGTGCTGTGGCAATTATGG+TGG | - | chr4_3:12450215-12450234 | Msa0630500:intron | 50.0% |
AATTACCTCCTGGTGTTCCC+AGG | - | chr4_3:12450283-12450302 | Msa0630500:CDS | 50.0% | |
AAAGATCCAGAGTAGCGCCT+GGG | + | chr4_3:12450303-12450322 | None:intergenic | 50.0% | |
AGGAAGGAGTTCGAGCTCTA+TGG | - | chr4_3:12450440-12450459 | Msa0630500:CDS | 50.0% | |
GAGTTCGAGCTCTATGGACA+GGG | - | chr4_3:12450446-12450465 | Msa0630500:CDS | 50.0% | |
GGTCCCAACATAGCGAGAAA+TGG | - | chr4_3:12450472-12450491 | Msa0630500:intron | 50.0% | |
! | ACTCATCTCTTTGCTGGCCT+TGG | - | chr4_3:12450687-12450706 | Msa0630500:intron | 50.0% |
!! | CTCATCTCTTTGCTGGCCTT+GGG | - | chr4_3:12450688-12450707 | Msa0630500:intron | 50.0% |
!! | TCATCTCTTTGCTGGCCTTG+GGG | - | chr4_3:12450689-12450708 | Msa0630500:intron | 50.0% |
GCAGGTCAAGTCGAGAATGA+TGG | - | chr4_3:12451115-12451134 | Msa0630500:intron | 50.0% | |
! | GTTTTTCCCCGAATGCCCTA+TGG | - | chr4_3:12451380-12451399 | Msa0630500:intron | 50.0% |
! | AACCCACACCATAGGGCATT+CGG | + | chr4_3:12451391-12451410 | None:intergenic | 50.0% |
AATGCCCTATGGTGTGGGTT+GGG | - | chr4_3:12451391-12451410 | Msa0630500:intron | 50.0% | |
ATGTCCCAACCCACACCATA+GGG | + | chr4_3:12451398-12451417 | None:intergenic | 50.0% | |
AGCATCAGAAATCGAACCCC+TGG | + | chr4_3:12451444-12451463 | None:intergenic | 50.0% | |
TGGTGTTTCTCAGGGACCTT+TGG | - | chr4_3:12451694-12451713 | Msa0630500:intron | 50.0% | |
CTAGCCGTCCAAAATTTGGG+AGG | + | chr4_3:12451736-12451755 | None:intergenic | 50.0% | |
! | CTCCCAAATTTTGGACGGCT+AGG | - | chr4_3:12451734-12451753 | Msa0630500:intron | 50.0% |
GGTTGGACCAAAGGAGAGGT+TGG | + | chr4_3:12447971-12447990 | None:intergenic | 55.0% | |
CGAAGGTTGGACCAAAGGAG+AGG | + | chr4_3:12447975-12447994 | None:intergenic | 55.0% | |
!! | AAAGCACTGCTGGCGAAGGT+TGG | + | chr4_3:12447988-12448007 | None:intergenic | 55.0% |
!! | ACATGCGGAGAAAGCACTGC+TGG | + | chr4_3:12447998-12448017 | None:intergenic | 55.0% |
!! | GTAGCAGTTTTGACCCCCCA+AGG | - | chr4_3:12448468-12448487 | Msa0630500:intron | 55.0% |
! | GACCCCCCAAGGCCAATTTT+TGG | - | chr4_3:12448479-12448498 | Msa0630500:intron | 55.0% |
! | CCCCCTAAGTTTTGCACCTG+TGG | + | chr4_3:12448589-12448608 | None:intergenic | 55.0% |
CAGGTGCAAAACTTAGGGGG+CGG | - | chr4_3:12448589-12448608 | Msa0630500:intron | 55.0% | |
GGTGGAACGGAGGAAACTCA+AGG | + | chr4_3:12449182-12449201 | None:intergenic | 55.0% | |
CTGACTTTGGCGGTGTCCAA+AGG | + | chr4_3:12449667-12449686 | None:intergenic | 55.0% | |
CTTTGGACACCGCCAAAGTC+AGG | - | chr4_3:12449665-12449684 | Msa0630500:CDS | 55.0% | |
GAACGGTTGGAACGATTGCC+AGG | - | chr4_3:12449755-12449774 | Msa0630500:intron | 55.0% | |
GGAACGATTGCCAGGGAAGA+AGG | - | chr4_3:12449763-12449782 | Msa0630500:intron | 55.0% | |
!! | TCTGGAAGGGCATTGTGCCA+GGG | - | chr4_3:12449797-12449816 | Msa0630500:CDS | 55.0% |
TACACGGGGAAGGACCATGT+GGG | - | chr4_3:12449979-12449998 | Msa0630500:intron | 55.0% | |
ACAGTGGAACATCGCCCACA+TGG | + | chr4_3:12449996-12450015 | None:intergenic | 55.0% | |
CAAAGATCCAGAGTAGCGCC+TGG | + | chr4_3:12450304-12450323 | None:intergenic | 55.0% | |
GGAGTTCGAGCTCTATGGAC+AGG | - | chr4_3:12450445-12450464 | Msa0630500:CDS | 55.0% | |
!! | TATCGGCTCCCCAGTTGATG+TGG | - | chr4_3:12450731-12450750 | Msa0630500:intron | 55.0% |
! | ACCCACACCATAGGGCATTC+GGG | + | chr4_3:12451390-12451409 | None:intergenic | 55.0% |
GAATGCCCTATGGTGTGGGT+TGG | - | chr4_3:12451390-12451409 | Msa0630500:intron | 55.0% | |
CATGTCCCAACCCACACCAT+AGG | + | chr4_3:12451399-12451418 | None:intergenic | 55.0% | |
GCTGGCGAAGGTTGGACCAA+AGG | + | chr4_3:12447980-12447999 | None:intergenic | 60.0% | |
!! | GGAGAAAGCACTGCTGGCGA+AGG | + | chr4_3:12447992-12448011 | None:intergenic | 60.0% |
CTGACGTGGCACCCTAAGTG+AGG | + | chr4_3:12448527-12448546 | None:intergenic | 60.0% | |
!! | TGACTCGGTCTACGCTGACG+TGG | + | chr4_3:12448541-12448560 | None:intergenic | 60.0% |
TTGGGGGCCAAAACTGCCAC+AGG | - | chr4_3:12448570-12448589 | Msa0630500:intron | 60.0% | |
!! | GGGTGTTGACTGCTCTGGTC+TGG | - | chr4_3:12448886-12448905 | Msa0630500:intron | 60.0% |
GAATCGACTGGGTGGAACGG+AGG | + | chr4_3:12449192-12449211 | None:intergenic | 60.0% | |
!! | CTCTGGAAGGGCATTGTGCC+AGG | - | chr4_3:12449796-12449815 | Msa0630500:CDS | 60.0% |
CTACACGGGGAAGGACCATG+TGG | - | chr4_3:12449978-12449997 | Msa0630500:intron | 60.0% | |
CGAGCTCTATGGACAGGGCT+TGG | - | chr4_3:12450451-12450470 | Msa0630500:CDS | 60.0% | |
!! | TCTTTGCTGGCCTTGGGGCA+GGG | - | chr4_3:12450694-12450713 | Msa0630500:intron | 60.0% |
CAGCGAAAAACCCTGCCCCA+AGG | + | chr4_3:12450707-12450726 | None:intergenic | 60.0% | |
TCCCCGAATGCCCTATGGTG+TGG | - | chr4_3:12451385-12451404 | Msa0630500:intron | 60.0% | |
! | CCCACACCATAGGGCATTCG+GGG | + | chr4_3:12451389-12451408 | None:intergenic | 60.0% |
CCCCGAATGCCCTATGGTGT+GGG | - | chr4_3:12451386-12451405 | Msa0630500:intron | 60.0% | |
TAGCGCCTGGGAACACCAGG+AGG | + | chr4_3:12450291-12450310 | None:intergenic | 65.0% | |
GAGTAGCGCCTGGGAACACC+AGG | + | chr4_3:12450294-12450313 | None:intergenic | 65.0% | |
GGTGTTCCCAGGCGCTACTC+TGG | - | chr4_3:12450294-12450313 | Msa0630500:CDS | 65.0% | |
!! | CTCTTTGCTGGCCTTGGGGC+AGG | - | chr4_3:12450693-12450712 | Msa0630500:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_3 | gene | 12447761 | 12452376 | 12447761 | ID=Msa0630500;Name=Msa0630500 |
chr4_3 | mRNA | 12447761 | 12452376 | 12447761 | ID=Msa0630500-mRNA-1;Parent=Msa0630500;Name=Msa0630500-mRNA-1;_AED=0.12;_eAED=0.12;_QI=188|1|1|1|1|1|9|375|303 |
chr4_3 | exon | 12447761 | 12448171 | 12447761 | ID=Msa0630500-mRNA-1:exon:3656;Parent=Msa0630500-mRNA-1 |
chr4_3 | exon | 12448344 | 12448430 | 12448344 | ID=Msa0630500-mRNA-1:exon:3655;Parent=Msa0630500-mRNA-1 |
chr4_3 | exon | 12448944 | 12449018 | 12448944 | ID=Msa0630500-mRNA-1:exon:3654;Parent=Msa0630500-mRNA-1 |
chr4_3 | exon | 12449385 | 12449489 | 12449385 | ID=Msa0630500-mRNA-1:exon:3653;Parent=Msa0630500-mRNA-1 |
chr4_3 | exon | 12449597 | 12449695 | 12449597 | ID=Msa0630500-mRNA-1:exon:3652;Parent=Msa0630500-mRNA-1 |
chr4_3 | exon | 12449787 | 12449920 | 12449787 | ID=Msa0630500-mRNA-1:exon:3651;Parent=Msa0630500-mRNA-1 |
chr4_3 | exon | 12450092 | 12450170 | 12450092 | ID=Msa0630500-mRNA-1:exon:3650;Parent=Msa0630500-mRNA-1 |
chr4_3 | exon | 12450267 | 12450485 | 12450267 | ID=Msa0630500-mRNA-1:exon:3649;Parent=Msa0630500-mRNA-1 |
chr4_3 | exon | 12452111 | 12452376 | 12452111 | ID=Msa0630500-mRNA-1:exon:3648;Parent=Msa0630500-mRNA-1 |
chr4_3 | five_prime_UTR | 12452189 | 12452376 | 12452189 | ID=Msa0630500-mRNA-1:five_prime_utr;Parent=Msa0630500-mRNA-1 |
chr4_3 | CDS | 12452111 | 12452188 | 12452111 | ID=Msa0630500-mRNA-1:cds;Parent=Msa0630500-mRNA-1 |
chr4_3 | CDS | 12450267 | 12450485 | 12450267 | ID=Msa0630500-mRNA-1:cds;Parent=Msa0630500-mRNA-1 |
chr4_3 | CDS | 12450092 | 12450170 | 12450092 | ID=Msa0630500-mRNA-1:cds;Parent=Msa0630500-mRNA-1 |
chr4_3 | CDS | 12449787 | 12449920 | 12449787 | ID=Msa0630500-mRNA-1:cds;Parent=Msa0630500-mRNA-1 |
chr4_3 | CDS | 12449597 | 12449695 | 12449597 | ID=Msa0630500-mRNA-1:cds;Parent=Msa0630500-mRNA-1 |
chr4_3 | CDS | 12449385 | 12449489 | 12449385 | ID=Msa0630500-mRNA-1:cds;Parent=Msa0630500-mRNA-1 |
chr4_3 | CDS | 12448944 | 12449018 | 12448944 | ID=Msa0630500-mRNA-1:cds;Parent=Msa0630500-mRNA-1 |
chr4_3 | CDS | 12448344 | 12448430 | 12448344 | ID=Msa0630500-mRNA-1:cds;Parent=Msa0630500-mRNA-1 |
chr4_3 | CDS | 12448136 | 12448171 | 12448136 | ID=Msa0630500-mRNA-1:cds;Parent=Msa0630500-mRNA-1 |
chr4_3 | three_prime_UTR | 12447761 | 12448135 | 12447761 | ID=Msa0630500-mRNA-1:three_prime_utr;Parent=Msa0630500-mRNA-1 |
Gene Sequence |
Protein sequence |