Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0670250 | XP_013456385.1 | 87.854 | 247 | 18 | 1 | 1 | 247 | 1 | 235 | 1.58e-147 | 429 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0670250 | sp|Q9LN62|RRA3_ARATH | 55.128 | 234 | 82 | 5 | 22 | 247 | 14 | 232 | 9.95e-75 | 236 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0670250 | A0A072UM19 | 87.854 | 247 | 18 | 1 | 1 | 247 | 1 | 235 | 7.53e-148 | 429 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0670250 | Msa0883640 | 0.807425 | 5.087042e-50 | -8.615850e-47 |
| Msa0670250 | Msa0910830 | 0.803195 | 3.914348e-49 | -8.615850e-47 |
| Msa0670250 | Msa0960090 | 0.806847 | 6.742629e-50 | -8.615850e-47 |
| Msa0670250 | Msa0985700 | 0.809221 | 2.106122e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0670250 | MtrunA17_Chr4g0034631 | 87.854 | 247 | 18 | 1 | 1 | 247 | 1 | 235 | 1.45e-151 | 429 |
| Msa0670250 | MtrunA17_Chr4g0034641 | 79.116 | 249 | 38 | 2 | 1 | 247 | 1 | 237 | 1.51e-132 | 380 |
| Msa0670250 | MtrunA17_Chr4g0034621 | 78.346 | 254 | 36 | 2 | 1 | 247 | 1 | 242 | 2.73e-127 | 367 |
| Msa0670250 | MtrunA17_Chr4g0034611 | 73.228 | 254 | 48 | 3 | 1 | 247 | 1 | 241 | 4.49e-125 | 362 |
| Msa0670250 | MtrunA17_Chr4g0034651 | 75.197 | 254 | 35 | 3 | 1 | 247 | 34 | 266 | 1.46e-118 | 346 |
| Msa0670250 | MtrunA17_Chr4g0034661 | 70.281 | 249 | 49 | 3 | 1 | 247 | 1 | 226 | 1.07e-103 | 307 |
| Msa0670250 | MtrunA17_Chr1g0154701 | 49.213 | 254 | 101 | 5 | 1 | 247 | 1 | 233 | 1.10e-71 | 225 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0670250 | AT1G19360.1 | 55.128 | 234 | 82 | 5 | 22 | 247 | 14 | 232 | 1.01e-75 | 236 |
| Msa0670250 | AT1G19360.2 | 55.128 | 234 | 82 | 5 | 22 | 247 | 14 | 232 | 1.01e-75 | 236 |
| Msa0670250 | AT1G75110.1 | 52.361 | 233 | 91 | 4 | 22 | 247 | 14 | 233 | 2.92e-70 | 222 |
| Msa0670250 | AT1G75120.1 | 51.111 | 225 | 77 | 5 | 24 | 247 | 16 | 208 | 2.86e-62 | 201 |
Find 48 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCGGGTCTCTTTGGTAAAA+TGG | 0.121490 | 4_4:-12614619 | None:intergenic |
| CTTGATATGAGTAGAAAATT+AGG | 0.240715 | 4_4:-12608616 | None:intergenic |
| GTAATCATTGGAGTTCTTAC+TGG | 0.296418 | 4_4:+12608652 | Msa0670250:CDS |
| AAGGCAACAACTAGATAATT+AGG | 0.315603 | 4_4:-12614556 | None:intergenic |
| TATCATTATCCGGGTCTCTT+TGG | 0.318671 | 4_4:-12614627 | None:intergenic |
| TAAGAATCCTGTACAATGAT+TGG | 0.344740 | 4_4:+12608556 | None:intergenic |
| TCTAATAAATTTGCCAATCT+CGG | 0.356388 | 4_4:-12614433 | None:intergenic |
| CATGTTAAAATCAGAATTAG+TGG | 0.362941 | 4_4:+12614234 | Msa0670250:CDS |
| TATACCAACTCTCTTGATAT+TGG | 0.365508 | 4_4:-12614533 | None:intergenic |
| TCCGAGACAGCCGCCCCGTT+TGG | 0.371510 | 4_4:-12614670 | None:intergenic |
| TGAAAATGAAACCTGGGTCT+TGG | 0.373380 | 4_4:-12608758 | None:intergenic |
| GTTGCTTGCATTAAGTAAAC+AGG | 0.375504 | 4_4:+12614336 | Msa0670250:CDS |
| TTGATATGAGTAGAAAATTA+GGG | 0.387021 | 4_4:-12608615 | None:intergenic |
| CCGGGTCTCTTTGGTAAAAT+GGG | 0.403345 | 4_4:-12614618 | None:intergenic |
| ACAGTATCAATATCATTATC+CGG | 0.404384 | 4_4:-12614637 | None:intergenic |
| AGAATTAGTGGCACTCTTAT+CGG | 0.411192 | 4_4:+12614246 | Msa0670250:CDS |
| CTAATAAATTTGCCAATCTC+GGG | 0.411225 | 4_4:-12614432 | None:intergenic |
| TCCAAACGGGGCGGCTGTCT+CGG | 0.414345 | 4_4:+12614669 | Msa0670250:CDS |
| TGAATTCTTGAACCCGAGAT+TGG | 0.422149 | 4_4:+12614420 | Msa0670250:CDS |
| GAAAATGAAACCTGGGTCTT+GGG | 0.428634 | 4_4:-12608757 | None:intergenic |
| ATCGTTACGGCTGTAATCAT+TGG | 0.431477 | 4_4:+12608640 | Msa0670250:CDS |
| TGGGTCTTGGGTACAGCAAC+CGG | 0.444887 | 4_4:-12608745 | None:intergenic |
| ATTAGGGTTGTTCTTCATCA+AGG | 0.448286 | 4_4:-12608599 | None:intergenic |
| CTCGGGTTCAAGAATTCATC+AGG | 0.455431 | 4_4:-12614415 | None:intergenic |
| AACCGGTAGGTGACGATTTG+AGG | 0.456398 | 4_4:-12608728 | None:intergenic |
| AAGAATCCTGTACAATGATT+GGG | 0.460232 | 4_4:+12608557 | None:intergenic |
| TGAGAAACAAAGAAGTCGTT+AGG | 0.478440 | 4_4:-12608697 | None:intergenic |
| ATCAGGAGCAACAGTAGGAT+TGG | 0.486219 | 4_4:-12614398 | None:intergenic |
| CCTTCACATTTGAGTTTGCA+AGG | 0.492258 | 4_4:-12614489 | None:intergenic |
| TGAAGGAAATGCTCGAGGTC+TGG | 0.494327 | 4_4:+12614506 | Msa0670250:CDS |
| TTAGGGTTGTTCTTCATCAA+GGG | 0.533582 | 4_4:-12608598 | None:intergenic |
| GATAATGATATTGATACTGT+TGG | 0.535960 | 4_4:+12614640 | Msa0670250:CDS |
| CACCTCAAATCGTCACCTAC+CGG | 0.537155 | 4_4:+12608726 | Msa0670250:CDS |
| ACTCATATCAAGGATCGTTA+CGG | 0.540834 | 4_4:+12608627 | Msa0670250:CDS |
| AAAACAGGTGAGGGAGTTGA+CGG | 0.545877 | 4_4:+12614288 | Msa0670250:CDS |
| TCTTCGATGAAAATGAAACC+TGG | 0.546558 | 4_4:-12608765 | None:intergenic |
| CAGTATCAATATCATTATCC+GGG | 0.561690 | 4_4:-12614636 | None:intergenic |
| CTTCACATTTGAGTTTGCAA+GGG | 0.571821 | 4_4:-12614488 | None:intergenic |
| CTTCGATGAAAATGAAACCT+GGG | 0.572533 | 4_4:-12608764 | None:intergenic |
| CCTTGCAAACTCAAATGTGA+AGG | 0.591600 | 4_4:+12614489 | Msa0670250:CDS |
| TTCACCAATATCAAGAGAGT+TGG | 0.596908 | 4_4:+12614529 | Msa0670250:CDS |
| AATGCCTTGACAGTACCAAA+AGG | 0.604979 | 4_4:-12614370 | None:intergenic |
| AATTCATCAGGAGCAACAGT+AGG | 0.620675 | 4_4:-12614403 | None:intergenic |
| AAATGTGAAGGAAATGCTCG+AGG | 0.650279 | 4_4:+12614501 | Msa0670250:CDS |
| CAGGTGAGGGAGTTGACGGA+AGG | 0.652925 | 4_4:+12614292 | Msa0670250:CDS |
| GGTTGCTGTACCCAAGACCC+AGG | 0.665733 | 4_4:+12608747 | Msa0670250:CDS |
| GTTGACGGAAGGAAAAGACC+AGG | 0.673638 | 4_4:+12614303 | Msa0670250:CDS |
| TCTTGGGTACAGCAACCGGT+AGG | 0.695714 | 4_4:-12608741 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAATTAATATTATAAAAA+TGG | - | chr4_4:12611095-12611114 | None:intergenic | 0.0% |
| !! | AAAAAAAAAAAAACTATTGT+TGG | - | chr4_4:12609173-12609192 | None:intergenic | 10.0% |
| !!! | TAAATATAGTTTTTTTTTTG+TGG | - | chr4_4:12609372-12609391 | None:intergenic | 10.0% |
| !! | TAGTTTAAATTCATTAAAAT+AGG | + | chr4_4:12609804-12609823 | Msa0670250:intron | 10.0% |
| !! | AATATATGATCATATTTAAA+AGG | + | chr4_4:12609850-12609869 | Msa0670250:intron | 10.0% |
| !! | ATATATGATCATATTTAAAA+GGG | + | chr4_4:12609851-12609870 | Msa0670250:intron | 10.0% |
| !! | TTAATTACTTGTAAAAAAAA+GGG | + | chr4_4:12609874-12609893 | Msa0670250:intron | 10.0% |
| !!! | AAACATTTTAATATTATGTT+TGG | - | chr4_4:12610925-12610944 | None:intergenic | 10.0% |
| !!! | ACAAAATATAATTTTATACA+AGG | - | chr4_4:12611210-12611229 | None:intergenic | 10.0% |
| !! | ATTTAAATCTTTATTGAAAT+AGG | + | chr4_4:12611372-12611391 | Msa0670250:intron | 10.0% |
| !!! | TGATTTTATATTTTTGAAAT+AGG | + | chr4_4:12611465-12611484 | Msa0670250:intron | 10.0% |
| !!! | TTTATTTTATTATTTATAGC+CGG | - | chr4_4:12611659-12611678 | None:intergenic | 10.0% |
| !! | TTATATATTAGTTAAAACAA+AGG | + | chr4_4:12611789-12611808 | Msa0670250:intron | 10.0% |
| !! | TATATATTAGTTAAAACAAA+GGG | + | chr4_4:12611790-12611809 | Msa0670250:intron | 10.0% |
| !!! | TTTTTTTTTGCTTATATTAT+CGG | - | chr4_4:12612595-12612614 | None:intergenic | 10.0% |
| !! | TAAATAAAACAAGATTAAAT+TGG | - | chr4_4:12612665-12612684 | None:intergenic | 10.0% |
| !! | TATTATAGTTACTATATTGT+TGG | - | chr4_4:12609410-12609429 | None:intergenic | 15.0% |
| !!! | ACTTTAGTTTAGTATAAAAT+AGG | + | chr4_4:12609737-12609756 | Msa0670250:intron | 15.0% |
| !!! | ATATATTATTTCTATTGTAG+CGG | - | chr4_4:12609837-12609856 | None:intergenic | 15.0% |
| !! | GTTAATTACTTGTAAAAAAA+AGG | + | chr4_4:12609873-12609892 | Msa0670250:intron | 15.0% |
| !! | TCTAAGAAATTCATAATTAT+GGG | + | chr4_4:12610410-12610429 | Msa0670250:intron | 15.0% |
| !!! | ATTATTTCATGATTTTTTTC+AGG | - | chr4_4:12610729-12610748 | None:intergenic | 15.0% |
| !!! | ATAAAAAGATATATCAGTTT+TGG | - | chr4_4:12610990-12611009 | None:intergenic | 15.0% |
| !! | GTTTAAATAAATGGTATAAA+TGG | - | chr4_4:12611747-12611766 | None:intergenic | 15.0% |
| !! | TTGGAAAATAAATTCTAATA+AGG | + | chr4_4:12611826-12611845 | Msa0670250:intron | 15.0% |
| !! | ATATTAATATACACCTAAAT+TGG | + | chr4_4:12612305-12612324 | Msa0670250:intron | 15.0% |
| !! | ATAGATTGGAAATAAAATTA+AGG | + | chr4_4:12612752-12612771 | Msa0670250:intron | 15.0% |
| !!! | GATTTTTTATTTTATTCTCT+TGG | + | chr4_4:12614170-12614189 | Msa0670250:intron | 15.0% |
| !! | TTGATATGAGTAGAAAATTA+GGG | - | chr4_4:12608618-12608637 | None:intergenic | 20.0% |
| !! | TTCAAGCACATTTAATTAAT+TGG | + | chr4_4:12609007-12609026 | Msa0670250:intron | 20.0% |
| !!! | AAAACTATTGTTGGTAATTT+AGG | - | chr4_4:12609164-12609183 | None:intergenic | 20.0% |
| !! | AATGCATAATAATATATGCA+AGG | + | chr4_4:12609324-12609343 | Msa0670250:intron | 20.0% |
| !!! | ATATAGTTTTTTTTTTGTGG+TGG | - | chr4_4:12609369-12609388 | None:intergenic | 20.0% |
| !! | AGTTTAAATTTCCATTATAG+TGG | - | chr4_4:12609770-12609789 | None:intergenic | 20.0% |
| !! | AAACTCAAAAAACAAAACAA+CGG | + | chr4_4:12610107-12610126 | Msa0670250:intron | 20.0% |
| !! | ACTAAAAAACTTCATTATGA+TGG | - | chr4_4:12610358-12610377 | None:intergenic | 20.0% |
| !! | GTCTAAGAAATTCATAATTA+TGG | + | chr4_4:12610409-12610428 | Msa0670250:intron | 20.0% |
| !!! | AAATTAGATTTTTTTCGACT+GGG | - | chr4_4:12610673-12610692 | None:intergenic | 20.0% |
| !!! | AAAATTAGATTTTTTTCGAC+TGG | - | chr4_4:12610674-12610693 | None:intergenic | 20.0% |
| !! | AAGAAGAATATCAAATTACA+AGG | + | chr4_4:12610801-12610820 | Msa0670250:intron | 20.0% |
| !!! | CAAACATAGTATATTTTACA+GGG | + | chr4_4:12610861-12610880 | Msa0670250:intron | 20.0% |
| !! | GGAAAATTGATATATCAATT+GGG | - | chr4_4:12610904-12610923 | None:intergenic | 20.0% |
| !! | TGGAAAATTGATATATCAAT+TGG | - | chr4_4:12610905-12610924 | None:intergenic | 20.0% |
| !!! | TTAGTATGATTAGATCTTTT+CGG | - | chr4_4:12610964-12610983 | None:intergenic | 20.0% |
| !! | GTAAAAAGTAATTAAGTCTA+GGG | - | chr4_4:12611263-12611282 | None:intergenic | 20.0% |
| !! | ATACTAGTAGTATATAGTAA+AGG | + | chr4_4:12611304-12611323 | Msa0670250:intron | 20.0% |
| !! | TACTAGTAGTATATAGTAAA+GGG | + | chr4_4:12611305-12611324 | Msa0670250:intron | 20.0% |
| !! | ACAATAAAAAAGCAGATAAA+TGG | + | chr4_4:12611606-12611625 | Msa0670250:intron | 20.0% |
| !!! | AAAGGGAATGATATTTTAAT+TGG | + | chr4_4:12611807-12611826 | Msa0670250:intron | 20.0% |
| !! | AAAACTGACATAAAGATAAA+CGG | + | chr4_4:12612526-12612545 | Msa0670250:intron | 20.0% |
| !!! | GTCTTTTTTGCTTATATTTT+GGG | - | chr4_4:12612632-12612651 | None:intergenic | 20.0% |
| !!! | TGTCTTTTTTGCTTATATTT+TGG | - | chr4_4:12612633-12612652 | None:intergenic | 20.0% |
| !! | ACAAAATACAAAACATAGAT+TGG | + | chr4_4:12612738-12612757 | Msa0670250:intron | 20.0% |
| !!! | ACTTATTTTCATAAGTAAAC+TGG | + | chr4_4:12613355-12613374 | Msa0670250:intron | 20.0% |
| !! | AATAGATTGAAAACTTAAGA+AGG | + | chr4_4:12613682-12613701 | Msa0670250:intron | 20.0% |
| !!! | TATTTTATAGGCAGAATTTA+GGG | + | chr4_4:12613872-12613891 | Msa0670250:intron | 20.0% |
| !!! | ATTACCTTAACCTAATTTTT+TGG | - | chr4_4:12614049-12614068 | None:intergenic | 20.0% |
| !! | AAAATTAGGTTAAGGTAATT+TGG | + | chr4_4:12614050-12614069 | Msa0670250:intron | 20.0% |
| ! | CTTGATATGAGTAGAAAATT+AGG | - | chr4_4:12608619-12608638 | None:intergenic | 25.0% |
| !! | CTAATTTTCTACTCATATCA+AGG | + | chr4_4:12608617-12608636 | Msa0670250:CDS | 25.0% |
| ! | ATAATAATATATGCAAGGTC+TGG | + | chr4_4:12609329-12609348 | Msa0670250:intron | 25.0% |
| ! | TAATAATATATGCAAGGTCT+GGG | + | chr4_4:12609330-12609349 | Msa0670250:intron | 25.0% |
| ! | CTAACAAATAGCATTCTTAT+AGG | + | chr4_4:12609455-12609474 | Msa0670250:intron | 25.0% |
| !! | TATAGGCAAAAACTTGTTTA+AGG | + | chr4_4:12609472-12609491 | Msa0670250:intron | 25.0% |
| !! | AACTTGTTTAAGGATATAAC+TGG | + | chr4_4:12609482-12609501 | Msa0670250:intron | 25.0% |
| ! | TAATAAGAATCTCGAATTAC+AGG | - | chr4_4:12609978-12609997 | None:intergenic | 25.0% |
| ! | CATAAAAAAATTCAGTCTCT+AGG | - | chr4_4:12610040-12610059 | None:intergenic | 25.0% |
| ! | GAACTCAAAATTGGATTTAT+AGG | - | chr4_4:12610142-12610161 | None:intergenic | 25.0% |
| !! | AAATGATTTGCAAAGTAACA+TGG | + | chr4_4:12610195-12610214 | Msa0670250:intron | 25.0% |
| !! | AATTTCAATTTTGCACGTTT+TGG | - | chr4_4:12610258-12610277 | None:intergenic | 25.0% |
| !! | ATTTCATTCCCTAATTTTGT+AGG | + | chr4_4:12610310-12610329 | Msa0670250:intron | 25.0% |
| !!! | TTTTTTAGTTTTGAAACGAG+AGG | + | chr4_4:12610369-12610388 | Msa0670250:intron | 25.0% |
| ! | CTTTATTCTTGAAGAATTCT+TGG | + | chr4_4:12610606-12610625 | Msa0670250:intron | 25.0% |
| !!! | AATTAGATTTTTTTCGACTG+GGG | - | chr4_4:12610672-12610691 | None:intergenic | 25.0% |
| ! | CCTGTAAAATATACTATGTT+TGG | - | chr4_4:12610863-12610882 | None:intergenic | 25.0% |
| !! | CCAAACATAGTATATTTTAC+AGG | + | chr4_4:12610860-12610879 | Msa0670250:intron | 25.0% |
| ! | ATACAGTTAAATGCAGTTAA+AGG | + | chr4_4:12611010-12611029 | Msa0670250:intron | 25.0% |
| !! | CAATTTTGTTACTATTGTTG+TGG | - | chr4_4:12611163-12611182 | None:intergenic | 25.0% |
| ! | CACAACAATAGTAACAAAAT+TGG | + | chr4_4:12611161-12611180 | Msa0670250:intron | 25.0% |
| ! | GGTAAAAAGTAATTAAGTCT+AGG | - | chr4_4:12611264-12611283 | None:intergenic | 25.0% |
| ! | ACTAGTAGTATATAGTAAAG+GGG | + | chr4_4:12611306-12611325 | Msa0670250:intron | 25.0% |
| !!! | TTTTAGAGTGCAACATATAA+AGG | + | chr4_4:12611691-12611710 | Msa0670250:intron | 25.0% |
| !! | TTTAGAGTGCAACATATAAA+GGG | + | chr4_4:12611692-12611711 | Msa0670250:intron | 25.0% |
| !! | AATTTGAAGTTAGAGAACTT+TGG | - | chr4_4:12611875-12611894 | None:intergenic | 25.0% |
| !! | CATTTTGTAATAAAATGTGC+AGG | - | chr4_4:12612000-12612019 | None:intergenic | 25.0% |
| ! | ATTATACGTAACAAACCTTA+TGG | - | chr4_4:12612036-12612055 | None:intergenic | 25.0% |
| ! | TCAATTTGCAATCTAACTTT+CGG | - | chr4_4:12612149-12612168 | None:intergenic | 25.0% |
| ! | AAACACTTTATCTGTCAATA+TGG | + | chr4_4:12612174-12612193 | Msa0670250:intron | 25.0% |
| ! | CCAAGTATGTATGTATTAAT+TGG | - | chr4_4:12612218-12612237 | None:intergenic | 25.0% |
| ! | CCAATTAATACATACATACT+TGG | + | chr4_4:12612215-12612234 | Msa0670250:intron | 25.0% |
| ! | AATCTCAAATTGAAGTTTCA+AGG | + | chr4_4:12612469-12612488 | Msa0670250:intron | 25.0% |
| ! | TTCAAGGTTTAATAGAACTA+AGG | + | chr4_4:12612485-12612504 | Msa0670250:intron | 25.0% |
| !! | TTTTTGCTTATATTATCGGA+CGG | - | chr4_4:12612591-12612610 | None:intergenic | 25.0% |
| ! | TTGCACTAAGATTAAATTCT+TGG | - | chr4_4:12612701-12612720 | None:intergenic | 25.0% |
| ! | AATTTAATCTTAGTGCAATG+AGG | + | chr4_4:12612703-12612722 | Msa0670250:intron | 25.0% |
| !!! | GGGTAATATTAATTGACTTT+TGG | - | chr4_4:12612904-12612923 | None:intergenic | 25.0% |
| ! | ACTCCTAATACTTAATGATT+CGG | + | chr4_4:12612979-12612998 | Msa0670250:intron | 25.0% |
| ! | TTTCCGAATCATTAAGTATT+AGG | - | chr4_4:12612985-12613004 | None:intergenic | 25.0% |
| ! | ATCTATGACAATTTGATTCA+TGG | - | chr4_4:12613417-12613436 | None:intergenic | 25.0% |
| ! | TTAAGATAAGAATCAAGGAT+AGG | - | chr4_4:12613506-12613525 | None:intergenic | 25.0% |
| !! | GAAGTTTAAGATAAGAATCA+AGG | - | chr4_4:12613511-12613530 | None:intergenic | 25.0% |
| !! | TAGCATAGTCACTATTTTAT+AGG | + | chr4_4:12613860-12613879 | Msa0670250:intron | 25.0% |
| !! | CTATTTTATAGGCAGAATTT+AGG | + | chr4_4:12613871-12613890 | Msa0670250:intron | 25.0% |
| ! | AAATGCAACAGCATTTATTA+GGG | + | chr4_4:12613921-12613940 | Msa0670250:intron | 25.0% |
| ! | AAATTAGAGCTGAAATTAGA+GGG | + | chr4_4:12614021-12614040 | Msa0670250:intron | 25.0% |
| !!! | TTTTATTTTATTCTCTTGGC+AGG | + | chr4_4:12614174-12614193 | Msa0670250:intron | 25.0% |
| ! | CATGTTAAAATCAGAATTAG+TGG | + | chr4_4:12614234-12614253 | Msa0670250:CDS | 25.0% |
| ! | TCTAATAAATTTGCCAATCT+CGG | - | chr4_4:12614436-12614455 | None:intergenic | 25.0% |
| ! | ACAGTATCAATATCATTATC+CGG | - | chr4_4:12614640-12614659 | None:intergenic | 25.0% |
| ! | GATAATGATATTGATACTGT+TGG | + | chr4_4:12614640-12614659 | Msa0670250:CDS | 25.0% |
| ! | ACTGTGATAGTGTTTGATTA+TGG | + | chr4_4:12608919-12608938 | Msa0670250:intron | 30.0% |
| ! | ATTATGGCTTTTACTACATG+TGG | + | chr4_4:12608935-12608954 | Msa0670250:intron | 30.0% |
| ! | TTATGGCTTTTACTACATGT+GGG | + | chr4_4:12608936-12608955 | Msa0670250:intron | 30.0% |
| AATAATATATGCAAGGTCTG+GGG | + | chr4_4:12609331-12609350 | Msa0670250:intron | 30.0% | |
| !!! | AGTTTTTTTTTTGTGGTGGT+CGG | - | chr4_4:12609365-12609384 | None:intergenic | 30.0% |
| ! | CCAAAGGATTTTTCATTTGA+TGG | - | chr4_4:12609613-12609632 | None:intergenic | 30.0% |
| CCATCAAATGAAAAATCCTT+TGG | + | chr4_4:12609610-12609629 | Msa0670250:intron | 30.0% | |
| CTAATTCAAAGTTTGTCCAA+AGG | - | chr4_4:12609629-12609648 | None:intergenic | 30.0% | |
| ! | CCATGACTTCATGATATTTT+TGG | - | chr4_4:12609688-12609707 | None:intergenic | 30.0% |
| CCAAAAATATCATGAAGTCA+TGG | + | chr4_4:12609685-12609704 | Msa0670250:intron | 30.0% | |
| GCATACAATGAACTCAAAAT+TGG | - | chr4_4:12610151-12610170 | None:intergenic | 30.0% | |
| TAACCATGCCTACAAAATTA+GGG | - | chr4_4:12610321-12610340 | None:intergenic | 30.0% | |
| !!! | AGAATTTTTCAAGACACAGT+TGG | + | chr4_4:12610491-12610510 | Msa0670250:intron | 30.0% |
| !!! | GATTTTTTTCAGGCATGTTT+AGG | - | chr4_4:12610719-12610738 | None:intergenic | 30.0% |
| CATGAAATAATTCAACCTCT+AGG | + | chr4_4:12610738-12610757 | Msa0670250:intron | 30.0% | |
| ! | TTGGACTACGTCTATATTTT+AGG | + | chr4_4:12610769-12610788 | Msa0670250:intron | 30.0% |
| ! | TGGACTACGTCTATATTTTA+GGG | + | chr4_4:12610770-12610789 | Msa0670250:intron | 30.0% |
| ! | AGTTAAAGGAGACACAATTT+TGG | + | chr4_4:12611024-12611043 | Msa0670250:intron | 30.0% |
| ! | GTTAAAGGAGACACAATTTT+GGG | + | chr4_4:12611025-12611044 | Msa0670250:intron | 30.0% |
| ! | TTTTAGACGAAGGTTAAAAC+CGG | - | chr4_4:12611065-12611084 | None:intergenic | 30.0% |
| GGGTAAAATTGACAGAAAAA+TGG | - | chr4_4:12611243-12611262 | None:intergenic | 30.0% | |
| TCAAGACATGCACAATAAAA+TGG | - | chr4_4:12611285-12611304 | None:intergenic | 30.0% | |
| CGCAACAATAAAAACAACAT+TGG | + | chr4_4:12611402-12611421 | Msa0670250:intron | 30.0% | |
| !! | GTTGCACTCTAAAATTTGAT+AGG | - | chr4_4:12611685-12611704 | None:intergenic | 30.0% |
| AAGAAGTCATTGAGAAACAA+AGG | - | chr4_4:12611912-12611931 | None:intergenic | 30.0% | |
| TCAAACAAAACATACTGACA+GGG | - | chr4_4:12612107-12612126 | None:intergenic | 30.0% | |
| TTCAAACAAAACATACTGAC+AGG | - | chr4_4:12612108-12612127 | None:intergenic | 30.0% | |
| CATACATACTTGGAACATAA+AGG | + | chr4_4:12612225-12612244 | Msa0670250:intron | 30.0% | |
| ! | TATACACCTAAATTGGTCTA+AGG | + | chr4_4:12612312-12612331 | Msa0670250:intron | 30.0% |
| GCATATAAAAAGACATGTCA+TGG | + | chr4_4:12612352-12612371 | Msa0670250:intron | 30.0% | |
| TAAAAAGACATGTCATGGAA+TGG | + | chr4_4:12612357-12612376 | Msa0670250:intron | 30.0% | |
| TGCGTAATACAAAAATGAGA+AGG | + | chr4_4:12612775-12612794 | Msa0670250:intron | 30.0% | |
| !!! | TGACTTTTGGTGTTTTCATT+AGG | - | chr4_4:12612891-12612910 | None:intergenic | 30.0% |
| TAAGTATTAGGAGTTGTTTG+TGG | - | chr4_4:12612973-12612992 | None:intergenic | 30.0% | |
| ATTCATTATATCATGTGCGA+AGG | + | chr4_4:12613380-12613399 | Msa0670250:intron | 30.0% | |
| TTCATTATATCATGTGCGAA+GGG | + | chr4_4:12613381-12613400 | Msa0670250:intron | 30.0% | |
| TAAGAATCAAGGATAGGTTT+GGG | - | chr4_4:12613500-12613519 | None:intergenic | 30.0% | |
| ATAAGAATCAAGGATAGGTT+TGG | - | chr4_4:12613501-12613520 | None:intergenic | 30.0% | |
| TTCACAGGGTTTGTATTAAT+GGG | + | chr4_4:12613620-12613639 | Msa0670250:intron | 30.0% | |
| GAAAACTTAAGAAGGATGTA+AGG | + | chr4_4:12613690-12613709 | Msa0670250:intron | 30.0% | |
| GAGGTTTCTAATATCATTGT+TGG | + | chr4_4:12613769-12613788 | Msa0670250:intron | 30.0% | |
| GAAATGCAACAGCATTTATT+AGG | + | chr4_4:12613920-12613939 | Msa0670250:intron | 30.0% | |
| ! | CTCTAATTTCAGCTCTAATT+TGG | - | chr4_4:12614022-12614041 | None:intergenic | 30.0% |
| CAAATTAGAGCTGAAATTAG+AGG | + | chr4_4:12614020-12614039 | Msa0670250:intron | 30.0% | |
| AGGTTAAGGTAATTTGGATT+AGG | + | chr4_4:12614056-12614075 | Msa0670250:intron | 30.0% | |
| GGTTAAGGTAATTTGGATTA+GGG | + | chr4_4:12614057-12614076 | Msa0670250:intron | 30.0% | |
| GAAACAAAGAAGTCATTGTT+GGG | - | chr4_4:12614145-12614164 | None:intergenic | 30.0% | |
| AGAAACAAAGAAGTCATTGT+TGG | - | chr4_4:12614146-12614165 | None:intergenic | 30.0% | |
| TTAAGTAAACAGGAAAAAGC+TGG | + | chr4_4:12614346-12614365 | Msa0670250:CDS | 30.0% | |
| CTAATAAATTTGCCAATCTC+GGG | - | chr4_4:12614435-12614454 | None:intergenic | 30.0% | |
| TATACCAACTCTCTTGATAT+TGG | - | chr4_4:12614536-12614555 | None:intergenic | 30.0% | |
| AAGGCAACAACTAGATAATT+AGG | - | chr4_4:12614559-12614578 | None:intergenic | 30.0% | |
| CAGTATCAATATCATTATCC+GGG | - | chr4_4:12614639-12614658 | None:intergenic | 30.0% | |
| ACTGTTGGAAAAATTCCAAA+CGG | + | chr4_4:12614655-12614674 | Msa0670250:CDS | 30.0% | |
| TTAGGGTTGTTCTTCATCAA+GGG | - | chr4_4:12608601-12608620 | None:intergenic | 35.0% | |
| ATTAGGGTTGTTCTTCATCA+AGG | - | chr4_4:12608602-12608621 | None:intergenic | 35.0% | |
| ACTCATATCAAGGATCGTTA+CGG | + | chr4_4:12608627-12608646 | Msa0670250:CDS | 35.0% | |
| GTAATCATTGGAGTTCTTAC+TGG | + | chr4_4:12608652-12608671 | Msa0670250:CDS | 35.0% | |
| TGAGAAACAAAGAAGTCGTT+AGG | - | chr4_4:12608700-12608719 | None:intergenic | 35.0% | |
| CTTCGATGAAAATGAAACCT+GGG | - | chr4_4:12608767-12608786 | None:intergenic | 35.0% | |
| TCTTCGATGAAAATGAAACC+TGG | - | chr4_4:12608768-12608787 | None:intergenic | 35.0% | |
| TGATAATATTACCAGCGTTC+AGG | + | chr4_4:12609098-12609117 | Msa0670250:intron | 35.0% | |
| TGAGCTTAACTCAGTTGTTA+AGG | + | chr4_4:12609299-12609318 | Msa0670250:intron | 35.0% | |
| !!! | TTTTTTTTTTGTGGTGGTCG+GGG | - | chr4_4:12609363-12609382 | None:intergenic | 35.0% |
| !!! | GTTTTTTTTTTGTGGTGGTC+GGG | - | chr4_4:12609364-12609383 | None:intergenic | 35.0% |
| ACGAATCAAGCAATTGAGTT+AGG | + | chr4_4:12609571-12609590 | Msa0670250:intron | 35.0% | |
| TGAATTAGCAGAGTCTCATT+CGG | + | chr4_4:12609641-12609660 | Msa0670250:intron | 35.0% | |
| TAGGAACAACACCACTATAA+TGG | + | chr4_4:12609756-12609775 | Msa0670250:intron | 35.0% | |
| !!! | CAGTCTCTAGGATGATTTTT+TGG | - | chr4_4:12610028-12610047 | None:intergenic | 35.0% |
| ! | ATTCCCTAATTTTGTAGGCA+TGG | + | chr4_4:12610315-12610334 | Msa0670250:intron | 35.0% |
| CTAACCATGCCTACAAAATT+AGG | - | chr4_4:12610322-12610341 | None:intergenic | 35.0% | |
| GGCAAATAGTGCATTGTAAT+TGG | + | chr4_4:12610578-12610597 | Msa0670250:intron | 35.0% | |
| TTCGACTGGGGATAAATTAA+TGG | - | chr4_4:12610660-12610679 | None:intergenic | 35.0% | |
| TTTAGACGAAGGTTAAAACC+GGG | - | chr4_4:12611064-12611083 | None:intergenic | 35.0% | |
| !!! | TGGTCAAAAGTTTTAGACGA+AGG | - | chr4_4:12611075-12611094 | None:intergenic | 35.0% |
| ATCAGTTTCCATCTTTCAAC+CGG | + | chr4_4:12611637-12611656 | Msa0670250:intron | 35.0% | |
| ATTTATAGCCGGTTGAAAGA+TGG | - | chr4_4:12611648-12611667 | None:intergenic | 35.0% | |
| TGTAGATGCGATATACCATA+AGG | + | chr4_4:12612018-12612037 | Msa0670250:intron | 35.0% | |
| CATACACCTTAGACCAATTT+AGG | - | chr4_4:12612321-12612340 | None:intergenic | 35.0% | |
| ! | ACGGAGGGAGTATAATTTAA+CGG | - | chr4_4:12612572-12612591 | None:intergenic | 35.0% |
| AATGTTCACAGAAGGATTGT+TGG | - | chr4_4:12612941-12612960 | None:intergenic | 35.0% | |
| AATGAATGGTTCTTGCAAGA+AGG | - | chr4_4:12613070-12613089 | None:intergenic | 35.0% | |
| ! | TGGTGGTTGTTTGAAATGAA+TGG | - | chr4_4:12613084-12613103 | None:intergenic | 35.0% |
| TAAGAATGGTGTGATGGTAT+GGG | - | chr4_4:12613319-12613338 | None:intergenic | 35.0% | |
| TTAAGAATGGTGTGATGGTA+TGG | - | chr4_4:12613320-12613339 | None:intergenic | 35.0% | |
| TGAGATTAAGAATGGTGTGA+TGG | - | chr4_4:12613325-12613344 | None:intergenic | 35.0% | |
| GATTGCGATGAGATTAAGAA+TGG | - | chr4_4:12613333-12613352 | None:intergenic | 35.0% | |
| TCATTATATCATGTGCGAAG+GGG | + | chr4_4:12613382-12613401 | Msa0670250:intron | 35.0% | |
| TTGTCAATGACAAACTTCAC+AGG | + | chr4_4:12613444-12613463 | Msa0670250:intron | 35.0% | |
| ATAGTCTGATCTCACGTTAA+GGG | + | chr4_4:12613574-12613593 | Msa0670250:intron | 35.0% | |
| GTTCACAGGGTTTGTATTAA+TGG | + | chr4_4:12613619-12613638 | Msa0670250:intron | 35.0% | |
| CCATATAAAAGAGAGAATCG+TGG | - | chr4_4:12613795-12613814 | None:intergenic | 35.0% | |
| ! | CCACGATTCTCTCTTTTATA+TGG | + | chr4_4:12613792-12613811 | Msa0670250:intron | 35.0% |
| ATGCACGTAATGGTTTGATT+AGG | - | chr4_4:12613829-12613848 | None:intergenic | 35.0% | |
| ATAGGCAGAATTTAGGGAAA+AGG | + | chr4_4:12613878-12613897 | Msa0670250:intron | 35.0% | |
| AGGTAGGTTGTAAATAGCAT+AGG | + | chr4_4:12613898-12613917 | Msa0670250:intron | 35.0% | |
| TCACATAGGAAACTGCAATA+CGG | - | chr4_4:12613974-12613993 | None:intergenic | 35.0% | |
| ! | AGGTAATTTGGATTAGGGTT+TGG | + | chr4_4:12614062-12614081 | Msa0670250:intron | 35.0% |
| AGAATTAGTGGCACTCTTAT+CGG | + | chr4_4:12614246-12614265 | Msa0670250:CDS | 35.0% | |
| AAATGCAGAGCTGAAAAAAC+AGG | + | chr4_4:12614273-12614292 | Msa0670250:CDS | 35.0% | |
| GTTGCTTGCATTAAGTAAAC+AGG | + | chr4_4:12614336-12614355 | Msa0670250:CDS | 35.0% | |
| ! | CTTCACATTTGAGTTTGCAA+GGG | - | chr4_4:12614491-12614510 | None:intergenic | 35.0% |
| TTCACCAATATCAAGAGAGT+TGG | + | chr4_4:12614529-12614548 | Msa0670250:CDS | 35.0% | |
| ! | TTTTGCAATCTCATCGTCTA+AGG | - | chr4_4:12614578-12614597 | None:intergenic | 35.0% |
| CTGTTGGAAAAATTCCAAAC+GGG | + | chr4_4:12614656-12614675 | Msa0670250:CDS | 35.0% | |
| TGTTGGAAAAATTCCAAACG+GGG | + | chr4_4:12614657-12614676 | Msa0670250:CDS | 35.0% | |
| ATTGGGCTCAGAGAAAAAGA+AGG | + | chr4_4:12608574-12608593 | Msa0670250:CDS | 40.0% | |
| ATCGTTACGGCTGTAATCAT+TGG | + | chr4_4:12608640-12608659 | Msa0670250:CDS | 40.0% | |
| GAAAATGAAACCTGGGTCTT+GGG | - | chr4_4:12608760-12608779 | None:intergenic | 40.0% | |
| TGAAAATGAAACCTGGGTCT+TGG | - | chr4_4:12608761-12608780 | None:intergenic | 40.0% | |
| AACAAAAACAGCGAAGTCAG+AGG | - | chr4_4:12608892-12608911 | None:intergenic | 40.0% | |
| TTACTACATGTGGGTCATTG+TGG | + | chr4_4:12608945-12608964 | Msa0670250:intron | 40.0% | |
| CTATTTGCCACAATTCAAGG+AGG | - | chr4_4:12610567-12610586 | None:intergenic | 40.0% | |
| GCACTATTTGCCACAATTCA+AGG | - | chr4_4:12610570-12610589 | None:intergenic | 40.0% | |
| ! | GCATGTTTAGGACGTCAAAA+TGG | - | chr4_4:12610707-12610726 | None:intergenic | 40.0% |
| !!! | CAACCTCTAGGTCACTTTTT+TGG | + | chr4_4:12610750-12610769 | Msa0670250:intron | 40.0% |
| AGTCCAAAAAAGTGACCTAG+AGG | - | chr4_4:12610756-12610775 | None:intergenic | 40.0% | |
| !!! | TTGGGCTGAATTTTTTGTCC+CGG | + | chr4_4:12611043-12611062 | Msa0670250:intron | 40.0% |
| TGAACTATATATGACCCGTG+CGG | - | chr4_4:12611969-12611988 | None:intergenic | 40.0% | |
| ACCACCATATCTGTCAAACT+GGG | + | chr4_4:12612253-12612272 | Msa0670250:intron | 40.0% | |
| TCTACCCAGTTTGACAGATA+TGG | - | chr4_4:12612260-12612279 | None:intergenic | 40.0% | |
| TGCTTATATTATCGGACGGA+GGG | - | chr4_4:12612587-12612606 | None:intergenic | 40.0% | |
| TTGCTTATATTATCGGACGG+AGG | - | chr4_4:12612588-12612607 | None:intergenic | 40.0% | |
| GAGAAGGACACTCAATTGTT+TGG | + | chr4_4:12612791-12612810 | Msa0670250:intron | 40.0% | |
| ATCTCGTTTCTGCCTAAAAC+AGG | + | chr4_4:12613011-12613030 | Msa0670250:intron | 40.0% | |
| !! | ATGGTTGGTACACCTGTTTT+AGG | - | chr4_4:12613026-12613045 | None:intergenic | 40.0% |
| AACAACCACCAACCTGAAAA+TGG | + | chr4_4:12613093-12613112 | Msa0670250:intron | 40.0% | |
| !!! | TATGTCCATTTTCAGGTTGG+TGG | - | chr4_4:12613101-12613120 | None:intergenic | 40.0% |
| !!! | CTGTATGTCCATTTTCAGGT+TGG | - | chr4_4:12613104-12613123 | None:intergenic | 40.0% |
| ACTTTGTAGCTCTTGATAGG+AGG | - | chr4_4:12613196-12613215 | None:intergenic | 40.0% | |
| CTGACTTTGTAGCTCTTGAT+AGG | - | chr4_4:12613199-12613218 | None:intergenic | 40.0% | |
| AAGAATGGTGTGATGGTATG+GGG | - | chr4_4:12613318-12613337 | None:intergenic | 40.0% | |
| CATTATATCATGTGCGAAGG+GGG | + | chr4_4:12613383-12613402 | Msa0670250:intron | 40.0% | |
| TTCACAGGAAAGCTGAAAGT+TGG | + | chr4_4:12613459-12613478 | Msa0670250:intron | 40.0% | |
| GGAAAGCTGAAAGTTGGATA+TGG | + | chr4_4:12613465-12613484 | Msa0670250:intron | 40.0% | |
| CATAGTCTGATCTCACGTTA+AGG | + | chr4_4:12613573-12613592 | Msa0670250:intron | 40.0% | |
| TGATCTCACGTTAAGGGTTT+AGG | + | chr4_4:12613580-12613599 | Msa0670250:intron | 40.0% | |
| GATCTCACGTTAAGGGTTTA+GGG | + | chr4_4:12613581-12613600 | Msa0670250:intron | 40.0% | |
| CTTTCATACGCATGTTTGAC+TGG | - | chr4_4:12613749-12613768 | None:intergenic | 40.0% | |
| CAGTCAAACATGCGTATGAA+AGG | + | chr4_4:12613747-12613766 | Msa0670250:intron | 40.0% | |
| TCAAACATGCGTATGAAAGG+AGG | + | chr4_4:12613750-12613769 | Msa0670250:intron | 40.0% | |
| ACAAGACTAGATGCACGTAA+TGG | - | chr4_4:12613839-12613858 | None:intergenic | 40.0% | |
| GCAGAATTTAGGGAAAAGGT+AGG | + | chr4_4:12613882-12613901 | Msa0670250:intron | 40.0% | |
| CAGCATTTATTAGGGCAAGA+AGG | + | chr4_4:12613929-12613948 | Msa0670250:intron | 40.0% | |
| ATTTATTAGGGCAAGAAGGC+AGG | + | chr4_4:12613933-12613952 | Msa0670250:intron | 40.0% | |
| ATTGCAGTTTCCTATGTGAG+TGG | + | chr4_4:12613975-12613994 | Msa0670250:intron | 40.0% | |
| !! | TTAGAGGGCGCCAAAAAATT+AGG | + | chr4_4:12614036-12614055 | Msa0670250:intron | 40.0% |
| GGCGCCAAAAAATTAGGTTA+AGG | + | chr4_4:12614042-12614061 | Msa0670250:intron | 40.0% | |
| AGAGCTGAAAAAACAGGTGA+GGG | + | chr4_4:12614279-12614298 | Msa0670250:CDS | 40.0% | |
| !!! | CAAGCAACTTTTTTTCAGCC+TGG | - | chr4_4:12614324-12614343 | None:intergenic | 40.0% |
| AATGCCTTGACAGTACCAAA+AGG | - | chr4_4:12614373-12614392 | None:intergenic | 40.0% | |
| AATTCATCAGGAGCAACAGT+AGG | - | chr4_4:12614406-12614425 | None:intergenic | 40.0% | |
| TGAATTCTTGAACCCGAGAT+TGG | + | chr4_4:12614420-12614439 | Msa0670250:CDS | 40.0% | |
| ! | CCTTCACATTTGAGTTTGCA+AGG | - | chr4_4:12614492-12614511 | None:intergenic | 40.0% |
| CCTTGCAAACTCAAATGTGA+AGG | + | chr4_4:12614489-12614508 | Msa0670250:CDS | 40.0% | |
| AAATGTGAAGGAAATGCTCG+AGG | + | chr4_4:12614501-12614520 | Msa0670250:CDS | 40.0% | |
| TATCATTATCCGGGTCTCTT+TGG | - | chr4_4:12614630-12614649 | None:intergenic | 40.0% | |
| ATAAGAGAGTCGTCCAAACG+TGG | + | chr4_4:12609061-12609080 | Msa0670250:intron | 45.0% | |
| AGTCGTCCAAACGTGGAATT+GGG | + | chr4_4:12609068-12609087 | Msa0670250:intron | 45.0% | |
| GATTCACCCAATTCCACGTT+TGG | - | chr4_4:12609077-12609096 | None:intergenic | 45.0% | |
| ACAACTGAGTTAAGCTCACG+AGG | - | chr4_4:12609297-12609316 | None:intergenic | 45.0% | |
| CCTGTGAGTATACGCTTAGT+AGG | - | chr4_4:12610286-12610305 | None:intergenic | 45.0% | |
| CCTACTAAGCGTATACTCAC+AGG | + | chr4_4:12610283-12610302 | Msa0670250:intron | 45.0% | |
| AGCTACACCTCCTTGAATTG+TGG | + | chr4_4:12610557-12610576 | Msa0670250:intron | 45.0% | |
| CACCACCATATCTGTCAAAC+TGG | + | chr4_4:12612252-12612271 | Msa0670250:intron | 45.0% | |
| ACCCAGTTTGACAGATATGG+TGG | - | chr4_4:12612257-12612276 | None:intergenic | 45.0% | |
| TCACAGAAGGATTGTTGGTG+TGG | - | chr4_4:12612936-12612955 | None:intergenic | 45.0% | |
| GCTTGCAGAATGTTCACAGA+AGG | - | chr4_4:12612949-12612968 | None:intergenic | 45.0% | |
| CAGGTGTACCAACCATAACA+TGG | + | chr4_4:12613030-12613049 | Msa0670250:intron | 45.0% | |
| !! | GAAGGTGTCCATGTTATGGT+TGG | - | chr4_4:12613041-12613060 | None:intergenic | 45.0% |
| !! | CAGTGAAGGTGTCCATGTTA+TGG | - | chr4_4:12613045-12613064 | None:intergenic | 45.0% |
| ! | GCGTCTGTATGTCCATTTTC+AGG | - | chr4_4:12613108-12613127 | None:intergenic | 45.0% |
| ATAGGAGGACTACTGTGTTG+AGG | - | chr4_4:12613181-12613200 | None:intergenic | 45.0% | |
| ! | CTGATTTTCCAGAACCTTGC+TGG | - | chr4_4:12613231-12613250 | None:intergenic | 45.0% |
| !! | CAGCAAGGTTCTGGAAAATC+AGG | + | chr4_4:12613229-12613248 | Msa0670250:intron | 45.0% |
| ! | ACGGTGGTTTTTGTTGGTCA+TGG | - | chr4_4:12613533-12613552 | None:intergenic | 45.0% |
| ! | TGGGTTACGGTGGTTTTTGT+TGG | - | chr4_4:12613539-12613558 | None:intergenic | 45.0% |
| CAGTTTCCTATGTGAGTGGA+GGG | + | chr4_4:12613979-12613998 | Msa0670250:intron | 45.0% | |
| CAATTACCCTCCACTCACAT+AGG | - | chr4_4:12613988-12614007 | None:intergenic | 45.0% | |
| TTAGGGTTTGGATGTCAGCT+AGG | + | chr4_4:12614074-12614093 | Msa0670250:intron | 45.0% | |
| CAGAGCTGAAAAAACAGGTG+AGG | + | chr4_4:12614278-12614297 | Msa0670250:CDS | 45.0% | |
| AAAACAGGTGAGGGAGTTGA+CGG | + | chr4_4:12614288-12614307 | Msa0670250:CDS | 45.0% | |
| ! | CAGGAAAAAGCTGGACCTTT+TGG | + | chr4_4:12614355-12614374 | Msa0670250:CDS | 45.0% |
| ! | TGGACCTTTTGGTACTGTCA+AGG | + | chr4_4:12614366-12614385 | Msa0670250:CDS | 45.0% |
| ATCAGGAGCAACAGTAGGAT+TGG | - | chr4_4:12614401-12614420 | None:intergenic | 45.0% | |
| CTCGGGTTCAAGAATTCATC+AGG | - | chr4_4:12614418-12614437 | None:intergenic | 45.0% | |
| CCGGGTCTCTTTGGTAAAAT+GGG | - | chr4_4:12614621-12614640 | None:intergenic | 45.0% | |
| ! | CCCATTTTACCAAAGAGACC+CGG | + | chr4_4:12614618-12614637 | Msa0670250:CDS | 45.0% |
| TCCGGGTCTCTTTGGTAAAA+TGG | - | chr4_4:12614622-12614641 | None:intergenic | 45.0% | |
| TGGAAAAATTCCAAACGGGG+CGG | + | chr4_4:12614660-12614679 | Msa0670250:CDS | 45.0% | |
| !!! | ATATATGTTTTTTATTTTAT+AGG | + | chr4_4:12610829-12610848 | Msa0670250:intron | 5.0% |
| !! | ATTATAATTGTTTAAATAAA+TGG | - | chr4_4:12611756-12611775 | None:intergenic | 5.0% |
| CACCTCAAATCGTCACCTAC+CGG | + | chr4_4:12608726-12608745 | Msa0670250:CDS | 50.0% | |
| AACCGGTAGGTGACGATTTG+AGG | - | chr4_4:12608731-12608750 | None:intergenic | 50.0% | |
| GAGTCGTCCAAACGTGGAAT+TGG | + | chr4_4:12609067-12609086 | Msa0670250:intron | 50.0% | |
| TTAGCAGAGTCTCATTCGGC+TGG | + | chr4_4:12609645-12609664 | Msa0670250:intron | 50.0% | |
| ! | TGTTGGTGTGGAGCTGCTTT+GGG | - | chr4_4:12612924-12612943 | None:intergenic | 50.0% |
| TTGTTGGTGTGGAGCTGCTT+TGG | - | chr4_4:12612925-12612944 | None:intergenic | 50.0% | |
| CTTGCAAGAAGGCTCAGTGA+AGG | - | chr4_4:12613059-12613078 | None:intergenic | 50.0% | |
| GGACGACTGTGGGAATTTGT+GGG | - | chr4_4:12613153-12613172 | None:intergenic | 50.0% | |
| TGGACGACTGTGGGAATTTG+TGG | - | chr4_4:12613154-12613173 | None:intergenic | 50.0% | |
| GACTACTGTGTTGAGGATGG+TGG | - | chr4_4:12613174-12613193 | None:intergenic | 50.0% | |
| GAGGACTACTGTGTTGAGGA+TGG | - | chr4_4:12613177-12613196 | None:intergenic | 50.0% | |
| GTCAGAATCCACTACCAGCA+AGG | + | chr4_4:12613214-12613233 | Msa0670250:intron | 50.0% | |
| ATCCACTACCAGCAAGGTTC+TGG | + | chr4_4:12613220-12613239 | Msa0670250:intron | 50.0% | |
| TTCCAGAACCTTGCTGGTAG+TGG | - | chr4_4:12613225-12613244 | None:intergenic | 50.0% | |
| TACAAACCCTGTGAACCAGC+TGG | - | chr4_4:12613615-12613634 | None:intergenic | 50.0% | |
| TATTAGGGCAAGAAGGCAGG+CGG | + | chr4_4:12613936-12613955 | Msa0670250:intron | 50.0% | |
| GCAGTTTCCTATGTGAGTGG+AGG | + | chr4_4:12613978-12613997 | Msa0670250:intron | 50.0% | |
| GTTGACGGAAGGAAAAGACC+AGG | + | chr4_4:12614303-12614322 | Msa0670250:CDS | 50.0% | |
| TGAAGGAAATGCTCGAGGTC+TGG | + | chr4_4:12614506-12614525 | Msa0670250:CDS | 50.0% | |
| TCTTGGGTACAGCAACCGGT+AGG | - | chr4_4:12608744-12608763 | None:intergenic | 55.0% | |
| TGGGTCTTGGGTACAGCAAC+CGG | - | chr4_4:12608748-12608767 | None:intergenic | 55.0% | |
| !! | TGAGGATGGTGGACGACTGT+GGG | - | chr4_4:12613163-12613182 | None:intergenic | 55.0% |
| !! | TTGAGGATGGTGGACGACTG+TGG | - | chr4_4:12613164-12613183 | None:intergenic | 55.0% |
| CACCGTAACCCAAGCACCAA+GGG | + | chr4_4:12613547-12613566 | Msa0670250:intron | 55.0% | |
| ! | TTTAGGGTTGCCTGTCCAGC+TGG | + | chr4_4:12613597-12613616 | Msa0670250:intron | 55.0% |
| GGTTGCTGTACCCAAGACCC+AGG | + | chr4_4:12608747-12608766 | Msa0670250:CDS | 60.0% | |
| CCAGCGTTCAGGCTTCGTGT+CGG | + | chr4_4:12609109-12609128 | Msa0670250:intron | 60.0% | |
| ! | TTTTCACCCGTGCTGCCGCA+CGG | + | chr4_4:12611951-12611970 | Msa0670250:intron | 60.0% |
| ATATGACCCGTGCGGCAGCA+CGG | - | chr4_4:12611961-12611980 | None:intergenic | 60.0% | |
| !! | CCTTGGTGCTTGGGTTACGG+TGG | - | chr4_4:12613549-12613568 | None:intergenic | 60.0% |
| CCACCGTAACCCAAGCACCA+AGG | + | chr4_4:12613546-12613565 | Msa0670250:intron | 60.0% | |
| ! | TGCCTGTCCAGCTGGTTCAC+AGG | + | chr4_4:12613605-12613624 | Msa0670250:intron | 60.0% |
| ! | GCCTGTCCAGCTGGTTCACA+GGG | + | chr4_4:12613606-12613625 | Msa0670250:intron | 60.0% |
| ACCCTGTGAACCAGCTGGAC+AGG | - | chr4_4:12613610-12613629 | None:intergenic | 60.0% | |
| CAGGTGAGGGAGTTGACGGA+AGG | + | chr4_4:12614292-12614311 | Msa0670250:CDS | 60.0% | |
| CCGACACGAAGCCTGAACGC+TGG | - | chr4_4:12609112-12609131 | None:intergenic | 65.0% | |
| TTTCACCCGTGCTGCCGCAC+GGG | + | chr4_4:12611952-12611971 | Msa0670250:intron | 65.0% | |
| TATGACCCGTGCGGCAGCAC+GGG | - | chr4_4:12611960-12611979 | None:intergenic | 65.0% | |
| TCCAAACGGGGCGGCTGTCT+CGG | + | chr4_4:12614669-12614688 | Msa0670250:CDS | 65.0% | |
| TCCGAGACAGCCGCCCCGTT+TGG | - | chr4_4:12614673-12614692 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 12608571 | 12614711 | 12608571 | ID=Msa0670250;Name=Msa0670250 |
| chr4_4 | mRNA | 12608571 | 12614711 | 12608571 | ID=Msa0670250-mRNA-1;Parent=Msa0670250;Name=Msa0670250-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|0|0|1|0|0.5|2|0|249 |
| chr4_4 | exon | 12608571 | 12608804 | 12608571 | ID=Msa0670250-mRNA-1:exon:3800;Parent=Msa0670250-mRNA-1 |
| chr4_4 | exon | 12614196 | 12614711 | 12614196 | ID=Msa0670250-mRNA-1:exon:3801;Parent=Msa0670250-mRNA-1 |
| chr4_4 | CDS | 12608571 | 12608804 | 12608571 | ID=Msa0670250-mRNA-1:cds;Parent=Msa0670250-mRNA-1 |
| chr4_4 | CDS | 12614196 | 12614711 | 12614196 | ID=Msa0670250-mRNA-1:cds;Parent=Msa0670250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
