Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0677780 | KEH29598.1 | 97.521 | 484 | 12 | 0 | 1 | 484 | 183 | 666 | 0.0 | 992 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0677780 | sp|Q9C5E5|DGK5_ARATH | 75.783 | 479 | 108 | 5 | 4 | 477 | 9 | 484 | 0.0 | 745 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0677780 | A0A072UKH9 | 97.521 | 484 | 12 | 0 | 1 | 484 | 183 | 666 | 0.0 | 992 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0598990 | Msa0677780 | 0.860963 | 1.431095e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0677780 | MtrunA17_Chr4g0022651 | 97.521 | 484 | 12 | 0 | 1 | 484 | 1 | 484 | 0.0 | 987 |
| Msa0677780 | MtrunA17_Chr2g0323521 | 80.083 | 482 | 91 | 3 | 4 | 484 | 7 | 484 | 0.0 | 811 |
| Msa0677780 | MtrunA17_Chr8g0360931 | 69.565 | 483 | 139 | 3 | 6 | 484 | 10 | 488 | 0.0 | 682 |
| Msa0677780 | MtrunA17_Chr4g0072941 | 34.684 | 395 | 240 | 7 | 32 | 416 | 81 | 467 | 8.91e-76 | 246 |
| Msa0677780 | MtrunA17_Chr2g0305591 | 34.739 | 403 | 245 | 7 | 24 | 416 | 81 | 475 | 2.02e-75 | 245 |
| Msa0677780 | MtrunA17_Chr8g0384961 | 28.404 | 426 | 232 | 13 | 7 | 428 | 303 | 659 | 1.09e-36 | 143 |
| Msa0677780 | MtrunA17_Chr4g0061331 | 26.884 | 398 | 212 | 11 | 36 | 428 | 359 | 682 | 7.00e-33 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0677780 | AT2G20900.3 | 76.132 | 486 | 108 | 5 | 4 | 484 | 9 | 491 | 0.0 | 757 |
| Msa0677780 | AT2G20900.2 | 76.132 | 486 | 108 | 5 | 4 | 484 | 9 | 491 | 0.0 | 757 |
| Msa0677780 | AT2G20900.4 | 75.783 | 479 | 108 | 5 | 4 | 477 | 9 | 484 | 0.0 | 745 |
| Msa0677780 | AT2G20900.1 | 75.783 | 479 | 108 | 5 | 4 | 477 | 9 | 484 | 0.0 | 745 |
| Msa0677780 | AT4G28130.1 | 69.401 | 451 | 129 | 5 | 4 | 453 | 16 | 458 | 0.0 | 645 |
| Msa0677780 | AT5G57690.1 | 36.750 | 400 | 235 | 6 | 27 | 416 | 81 | 472 | 2.62e-84 | 268 |
| Msa0677780 | AT4G30340.1 | 34.940 | 415 | 257 | 5 | 7 | 416 | 71 | 477 | 1.55e-83 | 266 |
| Msa0677780 | AT2G18730.1 | 35.476 | 420 | 239 | 8 | 11 | 416 | 72 | 473 | 1.67e-81 | 261 |
| Msa0677780 | AT4G30340.2 | 32.792 | 308 | 194 | 5 | 7 | 309 | 71 | 370 | 5.34e-52 | 181 |
| Msa0677780 | AT5G63770.1 | 31.990 | 397 | 195 | 14 | 36 | 428 | 342 | 667 | 1.39e-39 | 152 |
| Msa0677780 | AT5G63770.2 | 31.990 | 397 | 195 | 14 | 36 | 428 | 342 | 667 | 1.39e-39 | 152 |
| Msa0677780 | AT5G07920.3 | 26.076 | 395 | 218 | 10 | 36 | 428 | 361 | 683 | 7.82e-33 | 132 |
| Msa0677780 | AT5G07920.1 | 26.076 | 395 | 218 | 10 | 36 | 428 | 361 | 683 | 7.82e-33 | 132 |
| Msa0677780 | AT5G07920.2 | 26.020 | 392 | 216 | 10 | 36 | 425 | 361 | 680 | 1.40e-32 | 132 |
Find 150 sgRNAs with CRISPR-Local
Find 430 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGAAAGTTGACTTTAATT+TGG | 0.177903 | 4_4:-32382985 | None:intergenic |
| ACACCTTTCGTGGTGGATTT+TGG | 0.187411 | 4_4:+32385639 | Msa0677780:CDS |
| TCAAAGCAACTACAAATATT+AGG | 0.188908 | 4_4:-32389251 | None:intergenic |
| TGGATCACAGGAACCTTCTT+TGG | 0.239676 | 4_4:-32385237 | None:intergenic |
| TAAATTTCAGGTCTTTGATT+TGG | 0.250686 | 4_4:+32384194 | Msa0677780:intron |
| AAATTTCAGGTCTTTGATTT+GGG | 0.258634 | 4_4:+32384195 | Msa0677780:intron |
| CTTCTCTTAGCATTGGGATT+CGG | 0.267738 | 4_4:-32382884 | None:intergenic |
| CTGAAGCGGATGAACTTAAT+AGG | 0.269631 | 4_4:+32385309 | Msa0677780:CDS |
| ATCACGTTGCTTCTTCCTGC+TGG | 0.273418 | 4_4:-32388077 | None:intergenic |
| AGACGAGTTCCATGTCCTTT+TGG | 0.283514 | 4_4:-32388483 | None:intergenic |
| TTCTCTTAGCATTGGGATTC+GGG | 0.287076 | 4_4:-32382883 | None:intergenic |
| CTTGAACAACTTTAAGATTC+CGG | 0.292268 | 4_4:+32383349 | Msa0677780:CDS |
| CGACCCTGGTACTATGATTC+AGG | 0.300357 | 4_4:+32389393 | Msa0677780:three_prime_UTR |
| GAGAACAGTCTATGCAAATT+TGG | 0.301154 | 4_4:+32384242 | Msa0677780:CDS |
| AAATAAATGCTTTAGGTTGC+AGG | 0.328868 | 4_4:+32384434 | Msa0677780:intron |
| TGAGAAATATCAACATCATC+TGG | 0.334091 | 4_4:-32389183 | None:intergenic |
| ACTGCAAGAATTGAGCAAAT+TGG | 0.340464 | 4_4:-32389291 | None:intergenic |
| GTTTAAAGCATCCTTCTTCC+AGG | 0.351643 | 4_4:+32386454 | Msa0677780:CDS |
| TTTACCTGGGAGGTATGTTT+AGG | 0.362062 | 4_4:-32387179 | None:intergenic |
| TGCATACCTGATTCACCAAT+TGG | 0.371690 | 4_4:-32386226 | None:intergenic |
| CAAAGCAACTACAAATATTA+GGG | 0.378865 | 4_4:-32389250 | None:intergenic |
| GGCAGCTCAAGTGGCGCAAT+TGG | 0.387986 | 4_4:-32385257 | None:intergenic |
| GCAGAGGAATATCGGAAGTT+TGG | 0.394586 | 4_4:+32389138 | Msa0677780:CDS |
| CACCTTTGCAAAACTCAAAC+CGG | 0.396365 | 4_4:-32388909 | None:intergenic |
| GGATCACAGGAACCTTCTTT+GGG | 0.398638 | 4_4:-32385236 | None:intergenic |
| TTTGGAAAGCCTCAAGAAAC+GGG | 0.401027 | 4_4:+32384260 | Msa0677780:CDS |
| TTCTGGTGGATTTAATCCAT+GGG | 0.401527 | 4_4:+32388048 | Msa0677780:CDS |
| TATGACTGTAAAATTTGTAT+AGG | 0.406471 | 4_4:+32389316 | Msa0677780:three_prime_UTR |
| ACTGTTCTCAGCGCCTTATC+AGG | 0.409764 | 4_4:-32384228 | None:intergenic |
| GTGTACGATATGTTTGTAAC+AGG | 0.410350 | 4_4:-32383490 | None:intergenic |
| CATACATTCATGAGGATTGA+TGG | 0.410823 | 4_4:+32388940 | Msa0677780:CDS |
| GGCAATAGCTACTGTTCCCT+TGG | 0.414366 | 4_4:+32384520 | Msa0677780:CDS |
| TCCAAGCTGACCACCACTCT+TGG | 0.414812 | 4_4:-32383462 | None:intergenic |
| TTTGTTGATTAATTAATCAA+TGG | 0.415605 | 4_4:-32382944 | None:intergenic |
| ACACTGGAGCAGAGGAATAT+CGG | 0.423929 | 4_4:+32389130 | Msa0677780:CDS |
| TTTCTGGTGGATTTAATCCA+TGG | 0.429448 | 4_4:+32388047 | Msa0677780:CDS |
| AGGGATCTTCTCTTAGCATT+GGG | 0.429714 | 4_4:-32382890 | None:intergenic |
| TGTGCCTAAGTGTCCTGTCT+TGG | 0.434925 | 4_4:+32383427 | Msa0677780:CDS |
| TTCCTGCTGGGTGTACCCCA+TGG | 0.441224 | 4_4:-32388064 | None:intergenic |
| GGAACAGCAGGCTGGCTACT+TGG | 0.446845 | 4_4:+32384464 | Msa0677780:CDS |
| TCCAAGAGTGGTGGTCAGCT+TGG | 0.448311 | 4_4:+32383461 | Msa0677780:CDS |
| AGAGATTTCTCACCTTGGTC+AGG | 0.449064 | 4_4:+32389011 | Msa0677780:CDS |
| TGTCATCTTCTTCATTGTCA+TGG | 0.455405 | 4_4:-32389095 | None:intergenic |
| TTCATTAGGCACATAGAATC+CGG | 0.458068 | 4_4:+32388890 | Msa0677780:intron |
| GAAGGTTGCCACACCTTTCG+TGG | 0.458589 | 4_4:+32385629 | Msa0677780:CDS |
| TCAGCTGGCATATTCTTATG+AGG | 0.460496 | 4_4:+32385204 | Msa0677780:intron |
| TGAAGCGGATGAACTTAATA+GGG | 0.466957 | 4_4:+32385310 | Msa0677780:CDS |
| TAGAGTACGTATGCTAAGCT+TGG | 0.469811 | 4_4:+32386405 | Msa0677780:intron |
| CTGGTACTATGATTCAGGTT+TGG | 0.471016 | 4_4:+32389398 | Msa0677780:three_prime_UTR |
| GATTAATTAATCAATGGAAA+GGG | 0.478713 | 4_4:-32382938 | None:intergenic |
| AAGGGAACAGTAGCTATTGC+CGG | 0.478944 | 4_4:-32384518 | None:intergenic |
| ATTTGGAAAGCCTCAAGAAA+CGG | 0.479865 | 4_4:+32384259 | Msa0677780:CDS |
| GCTACTGTTCCCTTGGGCAC+AGG | 0.480107 | 4_4:+32384527 | Msa0677780:CDS |
| GAGGGATCTTCTCTTAGCAT+TGG | 0.481898 | 4_4:-32382891 | None:intergenic |
| GGGGCGATGGAACAGCAGGC+TGG | 0.482996 | 4_4:+32384456 | Msa0677780:CDS |
| TCACGTTGCTTCTTCCTGCT+GGG | 0.483020 | 4_4:-32388076 | None:intergenic |
| TCCGGATTACATTCTTGTAC+CGG | 0.485125 | 4_4:+32383367 | Msa0677780:CDS |
| AGAGTGGTGGTCAGCTTGGA+GGG | 0.494247 | 4_4:+32383465 | Msa0677780:CDS |
| ATCCATGGGGTACACCCAGC+AGG | 0.494352 | 4_4:+32388062 | Msa0677780:CDS |
| CAAACCTGAATCATAGTACC+AGG | 0.501436 | 4_4:-32389397 | None:intergenic |
| TTCAATCTCATTCCATCTCC+AGG | 0.504499 | 4_4:+32383010 | Msa0677780:five_prime_UTR |
| AAGAGTGGTGGTCAGCTTGG+AGG | 0.505171 | 4_4:+32383464 | Msa0677780:CDS |
| TGATTAATTAATCAATGGAA+AGG | 0.505444 | 4_4:-32382939 | None:intergenic |
| AGAAGGCCATCATCCACATA+TGG | 0.505822 | 4_4:-32388411 | None:intergenic |
| ACATGGAACTCGTCTTGCTC+AGG | 0.506463 | 4_4:+32388491 | Msa0677780:CDS |
| AGCTTGGATGCACGCAAGGT+TGG | 0.508967 | 4_4:+32386421 | Msa0677780:CDS |
| TTTAGGTCTTGCCATTGACC+AGG | 0.510091 | 4_4:-32387162 | None:intergenic |
| TTACAGGGGAAGAAGAATCC+AGG | 0.517078 | 4_4:+32384915 | Msa0677780:intron |
| GCTGGAAGAGGTTGTTTCCA+AGG | 0.517328 | 4_4:-32388967 | None:intergenic |
| GGAAGAAGGATGCTTTAAAC+CGG | 0.518327 | 4_4:-32386451 | None:intergenic |
| AATAAATGCTTTAGGTTGCA+GGG | 0.519840 | 4_4:+32384435 | Msa0677780:intron |
| CGCTTCAGATACACGATGAA+AGG | 0.520320 | 4_4:-32385294 | None:intergenic |
| TAAAACCAACGATTTCAAGA+AGG | 0.521347 | 4_4:-32388428 | None:intergenic |
| CATTCTTGTACCGGAATCCA+AGG | 0.521654 | 4_4:+32383376 | Msa0677780:CDS |
| TCCGGTACAAGAATGTAATC+CGG | 0.527063 | 4_4:-32383368 | None:intergenic |
| AGATTTGACACCGCCATATG+TGG | 0.527724 | 4_4:+32388398 | Msa0677780:CDS |
| ATCTAAGCAAGGATAGTTGA+GGG | 0.534455 | 4_4:-32389355 | None:intergenic |
| GCAATAGCTACTGTTCCCTT+GGG | 0.539575 | 4_4:+32384521 | Msa0677780:CDS |
| CCTACCCAACCAAATGCAAA+AGG | 0.541227 | 4_4:-32384560 | None:intergenic |
| CTACTGTTCCCTTGGGCACA+GGG | 0.542272 | 4_4:+32384528 | Msa0677780:CDS |
| TAGTGAACTGACCTGGAAGA+AGG | 0.542887 | 4_4:-32386465 | None:intergenic |
| TAGATTGTTCCCTGTGCCCA+AGG | 0.543554 | 4_4:-32384537 | None:intergenic |
| GATGGCCTTCTTGAAATCGT+TGG | 0.545056 | 4_4:+32388423 | Msa0677780:CDS |
| TTGTCATGGTGTGGTGATGA+AGG | 0.545123 | 4_4:-32389081 | None:intergenic |
| AGAGAATGTGGCAGCTCAAG+TGG | 0.545699 | 4_4:-32385266 | None:intergenic |
| ATAAATGCTTTAGGTTGCAG+GGG | 0.546761 | 4_4:+32384436 | Msa0677780:intron |
| AAGTGGCGCAATTGGATCAC+AGG | 0.546833 | 4_4:-32385249 | None:intergenic |
| TTGCTTGCTCCAAAAGGACA+TGG | 0.547794 | 4_4:+32388474 | Msa0677780:CDS |
| ACTGAGCGTTGATCTGTCCC+TGG | 0.552577 | 4_4:-32384933 | None:intergenic |
| TCTGAAATTATCTCATCCTC+CGG | 0.554396 | 4_4:+32384499 | Msa0677780:CDS |
| TGAGGATTGATGGAGAACCT+TGG | 0.555058 | 4_4:+32388950 | Msa0677780:CDS |
| TTTAGACTTGCATATATGAG+TGG | 0.564148 | 4_4:-32389046 | None:intergenic |
| GCTAAGCTTGGATGCACGCA+AGG | 0.566400 | 4_4:+32386417 | Msa0677780:CDS |
| GAGAAATATCAACATCATCT+GGG | 0.569057 | 4_4:-32389182 | None:intergenic |
| ATTCATCACCCCGTTTCTTG+AGG | 0.570503 | 4_4:-32384269 | None:intergenic |
| AAAACCAAGACAGGACACTT+AGG | 0.571730 | 4_4:-32383431 | None:intergenic |
| AGGATGAGAGCTCCCAAAGA+AGG | 0.573796 | 4_4:+32385224 | Msa0677780:CDS |
| GATTCTTTAATGCAGGAACA+TGG | 0.574303 | 4_4:+32387107 | Msa0677780:intron |
| GTATCATCATCAGCTGGAAG+AGG | 0.577742 | 4_4:-32388979 | None:intergenic |
| AGATCAAGTCATGAAGGCAA+AGG | 0.578487 | 4_4:+32384968 | Msa0677780:CDS |
| ATTCCAAAATCCACCACGAA+AGG | 0.579755 | 4_4:-32385642 | None:intergenic |
| TTAAATCCACCAGAAAAGCT+TGG | 0.585369 | 4_4:-32388040 | None:intergenic |
| ATTTCAGGTCTTTGATTTGG+GGG | 0.588129 | 4_4:+32384197 | Msa0677780:intron |
| TCTTCTTCATTGTCATGGTG+TGG | 0.591432 | 4_4:-32389090 | None:intergenic |
| CTTTCATCGTGTATCTGAAG+CGG | 0.592400 | 4_4:+32385295 | Msa0677780:CDS |
| GTTGAGAAAATTGAGGAATG+TGG | 0.593629 | 4_4:+32383398 | Msa0677780:CDS |
| AAGGGAAAAGTTCATGTGGA+AGG | 0.596812 | 4_4:-32382920 | None:intergenic |
| TGAAAGGCATGCAGAGAATG+TGG | 0.598076 | 4_4:-32385278 | None:intergenic |
| TCTAAGCAAGGATAGTTGAG+GGG | 0.599437 | 4_4:-32389354 | None:intergenic |
| TTTGTTAACTCCAAGAGTGG+TGG | 0.600344 | 4_4:+32383452 | Msa0677780:CDS |
| AATCTAAGCAAGGATAGTTG+AGG | 0.601025 | 4_4:-32389356 | None:intergenic |
| ATCCAAGGTTGAGAAAATTG+AGG | 0.601073 | 4_4:+32383391 | Msa0677780:CDS |
| ACACCGCCATATGTGGATGA+TGG | 0.602505 | 4_4:+32388405 | Msa0677780:CDS |
| TATGTGTGTGTACCTGGAGA+TGG | 0.604563 | 4_4:-32383022 | None:intergenic |
| TGGAAAGGGAAAAGTTCATG+TGG | 0.609299 | 4_4:-32382924 | None:intergenic |
| ACGACGGTATCATCATCAGC+TGG | 0.609606 | 4_4:-32388985 | None:intergenic |
| GGTTGCCACACCTTTCGTGG+TGG | 0.609697 | 4_4:+32385632 | Msa0677780:CDS |
| TGAATTTGCTATGACGATCA+TGG | 0.611905 | 4_4:+32384287 | Msa0677780:CDS |
| AATGGACACACAAGCTCGAG+AGG | 0.616092 | 4_4:-32389424 | None:intergenic |
| TCTGGTGGATTTAATCCATG+GGG | 0.616150 | 4_4:+32388049 | Msa0677780:CDS |
| CTAAGCAAGGATAGTTGAGG+GGG | 0.617195 | 4_4:-32389353 | None:intergenic |
| GACAGATCAACGCTCAGTGG+TGG | 0.620743 | 4_4:+32384938 | Msa0677780:CDS |
| TGTGCAGCTGCATGCAACAA+TGG | 0.622262 | 4_4:+32383316 | Msa0677780:intron |
| TGAAGAAGACACTGGAGCAG+AGG | 0.623546 | 4_4:+32389122 | Msa0677780:CDS |
| ATATCGGAAGTTTGGTGCAG+CGG | 0.623694 | 4_4:+32389146 | Msa0677780:CDS |
| AATTTCAGGTCTTTGATTTG+GGG | 0.631109 | 4_4:+32384196 | Msa0677780:intron |
| AAAATCCACCACGAAAGGTG+TGG | 0.634456 | 4_4:-32385637 | None:intergenic |
| AGATTGTTCCCTGTGCCCAA+GGG | 0.634642 | 4_4:-32384536 | None:intergenic |
| AGTTACTTGAAATCTAAGCA+AGG | 0.636240 | 4_4:-32389366 | None:intergenic |
| TACAGGGGAAGAAGAATCCA+GGG | 0.639384 | 4_4:+32384916 | Msa0677780:intron |
| AAGACCTAAACATACCTCCC+AGG | 0.644748 | 4_4:+32387175 | Msa0677780:CDS |
| GTGGTAGAGATTTCTCACCT+TGG | 0.647555 | 4_4:+32389006 | Msa0677780:CDS |
| TTGCTATGACGATCATGGAG+AGG | 0.647599 | 4_4:+32384292 | Msa0677780:CDS |
| TCAAGTAACTCTAACGACCC+TGG | 0.650935 | 4_4:+32389379 | Msa0677780:three_prime_UTR |
| GACAGTGATGAAGAAGACAC+TGG | 0.653949 | 4_4:+32389114 | Msa0677780:CDS |
| TATGAAATGGTTTACCTGGG+AGG | 0.657910 | 4_4:-32387189 | None:intergenic |
| GAGTGGTGGTCAGCTTGGAG+GGG | 0.660306 | 4_4:+32383466 | Msa0677780:CDS |
| GAGCAGATCATACATTCATG+AGG | 0.663497 | 4_4:+32388932 | Msa0677780:CDS |
| TAAATGCTTTAGGTTGCAGG+GGG | 0.665293 | 4_4:+32384437 | Msa0677780:intron |
| AGGCCATCATCCACATATGG+CGG | 0.671790 | 4_4:-32388408 | None:intergenic |
| ATTGGGATTCGGGATCTGAG+TGG | 0.682656 | 4_4:-32382873 | None:intergenic |
| AGCTGATGATGATACCGTCG+TGG | 0.687523 | 4_4:+32388987 | Msa0677780:CDS |
| AGGGACAGATCAACGCTCAG+TGG | 0.707774 | 4_4:+32384935 | Msa0677780:CDS |
| CAAGCATGTTAACCTGACCA+AGG | 0.711731 | 4_4:-32389023 | None:intergenic |
| TTGGAAAGCCTCAAGAAACG+GGG | 0.715280 | 4_4:+32384261 | Msa0677780:CDS |
| AAACCTGAATCATAGTACCA+GGG | 0.720172 | 4_4:-32389396 | None:intergenic |
| GGAACAGTAGCTATTGCCGG+AGG | 0.720337 | 4_4:-32384515 | None:intergenic |
| TCATGTGGAAGGAATTACGA+GGG | 0.720874 | 4_4:-32382909 | None:intergenic |
| GTGAGAAATCTCTACCACGA+CGG | 0.731993 | 4_4:-32389001 | None:intergenic |
| TTCATGTGGAAGGAATTACG+AGG | 0.759379 | 4_4:-32382910 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTTAAAATTATTAT+CGG | - | chr4_4:32383157-32383176 | None:intergenic | 0.0% |
| !!! | ATATTTTATTTTTAAAAATT+AGG | - | chr4_4:32386120-32386139 | None:intergenic | 0.0% |
| !! | TCAAGTATAAAAAATAAAAA+AGG | - | chr4_4:32385477-32385496 | None:intergenic | 10.0% |
| !!! | TTTTATTTTTAAAAATTAGG+TGG | - | chr4_4:32386117-32386136 | None:intergenic | 10.0% |
| !! | TAAAACATTAAAAAATATAC+AGG | + | chr4_4:32387230-32387249 | Msa0677780:intron | 10.0% |
| !! | AAAGAAAAAAACAATTATTT+AGG | - | chr4_4:32387414-32387433 | None:intergenic | 10.0% |
| !! | TATGTTAATTTATTTAAAGA+CGG | - | chr4_4:32387752-32387771 | None:intergenic | 10.0% |
| !!! | TTTGTTGATTAATTAATCAA+TGG | - | chr4_4:32382947-32382966 | None:intergenic | 15.0% |
| !! | ATATGTTATGAAATTAAACA+TGG | - | chr4_4:32383073-32383092 | None:intergenic | 15.0% |
| !!! | ATTTGTTGAAGAATTAAAAT+TGG | + | chr4_4:32383274-32383293 | Msa0677780:intron | 15.0% |
| !! | TACAATTTCAAAGATTAAAA+TGG | + | chr4_4:32384126-32384145 | Msa0677780:intron | 15.0% |
| !!! | AAACTAGATTTAAGATATTA+AGG | + | chr4_4:32384602-32384621 | Msa0677780:intron | 15.0% |
| !! | AATTTAAATAAAACAAACCA+TGG | - | chr4_4:32385541-32385560 | None:intergenic | 15.0% |
| !! | TAATGAAAAACACATTTATA+TGG | - | chr4_4:32385744-32385763 | None:intergenic | 15.0% |
| !!! | TATAAATGTGTTTTTCATTA+TGG | + | chr4_4:32385744-32385763 | Msa0677780:intron | 15.0% |
| !!! | TTTAAAAGAGAAAGTTTTAA+TGG | - | chr4_4:32385899-32385918 | None:intergenic | 15.0% |
| !! | AAAAATAATCAAGCAAAATA+AGG | - | chr4_4:32386036-32386055 | None:intergenic | 15.0% |
| !! | CATTTACATCATAAAATTTA+AGG | - | chr4_4:32386557-32386576 | None:intergenic | 15.0% |
| !!! | TTATTTTTCAATTTGATACT+TGG | + | chr4_4:32386850-32386869 | Msa0677780:intron | 15.0% |
| !!! | TAATGATTTTCTTGTATATT+TGG | + | chr4_4:32387047-32387066 | Msa0677780:intron | 15.0% |
| !! | AAAAAGTTATATTACAAGAT+AGG | - | chr4_4:32387673-32387692 | None:intergenic | 15.0% |
| !! | ATAAATTAACATATATGTAG+CGG | + | chr4_4:32387759-32387778 | Msa0677780:intron | 15.0% |
| !! | GATTAATTAATCAATGGAAA+GGG | - | chr4_4:32382941-32382960 | None:intergenic | 20.0% |
| !! | TGATTAATTAATCAATGGAA+AGG | - | chr4_4:32382942-32382961 | None:intergenic | 20.0% |
| !! | ATATAAGAGAATTTGCAAAA+TGG | - | chr4_4:32383106-32383125 | None:intergenic | 20.0% |
| !!! | TTTTTATATGTATATAGTCC+CGG | + | chr4_4:32383534-32383553 | Msa0677780:intron | 20.0% |
| !!! | TGTTTTAATATAAGTTGTCA+TGG | + | chr4_4:32383749-32383768 | Msa0677780:intron | 20.0% |
| !!! | TAGTTTGAAATAAATGCTTT+AGG | + | chr4_4:32384427-32384446 | Msa0677780:intron | 20.0% |
| !! | TAGTTATACGATTAAAGAAT+AGG | - | chr4_4:32385025-32385044 | None:intergenic | 20.0% |
| !! | TATTCTTTAATCGTATAACT+AGG | + | chr4_4:32385024-32385043 | Msa0677780:intron | 20.0% |
| !! | TTATCAAAATTAAGACATAC+AGG | - | chr4_4:32385070-32385089 | None:intergenic | 20.0% |
| !!! | TGTTGTTTGATATTTGTTTT+TGG | + | chr4_4:32385168-32385187 | Msa0677780:intron | 20.0% |
| !!! | ATTTTTTATACTTGAGTTTG+TGG | + | chr4_4:32385482-32385501 | Msa0677780:intron | 20.0% |
| !!! | TATGTCATTTAAATTTGATC+TGG | + | chr4_4:32385797-32385816 | Msa0677780:intron | 20.0% |
| !! | AAATTTAGATGTAAGTAATG+AGG | + | chr4_4:32385929-32385948 | Msa0677780:intron | 20.0% |
| !! | TTTAGACCTTAGATTATATT+GGG | + | chr4_4:32386073-32386092 | Msa0677780:intron | 20.0% |
| !!! | AATTGGTTTTTGAATTTTTC+AGG | - | chr4_4:32386212-32386231 | None:intergenic | 20.0% |
| !! | TGAAAAATTCAAAAACCAAT+TGG | + | chr4_4:32386211-32386230 | Msa0677780:CDS | 20.0% |
| !! | CTAAAATGTCAATTGAAATT+AGG | - | chr4_4:32386388-32386407 | None:intergenic | 20.0% |
| !! | TTACATCATAAAATTTAAGG+CGG | - | chr4_4:32386554-32386573 | None:intergenic | 20.0% |
| !! | TAAAATTGCTTGCATTATTA+TGG | + | chr4_4:32386710-32386729 | Msa0677780:intron | 20.0% |
| !! | AAAATTGCTTGCATTATTAT+GGG | + | chr4_4:32386711-32386730 | Msa0677780:intron | 20.0% |
| !!! | ATTTAAGAACATGAAACTTT+TGG | - | chr4_4:32386825-32386844 | None:intergenic | 20.0% |
| !! | AAAGTTTCATGTTCTTAAAT+TGG | + | chr4_4:32386825-32386844 | Msa0677780:intron | 20.0% |
| !! | AAGTTTCATGTTCTTAAATT+GGG | + | chr4_4:32386826-32386845 | Msa0677780:intron | 20.0% |
| !! | ACTGTATTACCAAATAAATT+TGG | - | chr4_4:32386990-32387009 | None:intergenic | 20.0% |
| !! | ATAATTTGATTCTTTAATGC+AGG | + | chr4_4:32387100-32387119 | Msa0677780:intron | 20.0% |
| !! | GATATAGATAGTATATGAAA+TGG | - | chr4_4:32387205-32387224 | None:intergenic | 20.0% |
| !! | TTAAAAAATATACAGGTTAG+TGG | + | chr4_4:32387237-32387256 | Msa0677780:intron | 20.0% |
| !! | ATATGTAACTCTTGTATTTA+TGG | - | chr4_4:32387551-32387570 | None:intergenic | 20.0% |
| !! | GATGGTATATGAATAAATAA+AGG | + | chr4_4:32387640-32387659 | Msa0677780:intron | 20.0% |
| !!! | TTTGACTTTGTCTTTTAAAA+GGG | - | chr4_4:32388594-32388613 | None:intergenic | 20.0% |
| !!! | TTTTGACTTTGTCTTTTAAA+AGG | - | chr4_4:32388595-32388614 | None:intergenic | 20.0% |
| !! | ATGACATGAAAATAAAACTA+TGG | + | chr4_4:32388842-32388861 | Msa0677780:intron | 20.0% |
| !! | TATGACTGTAAAATTTGTAT+AGG | + | chr4_4:32389316-32389335 | Msa0677780:three_prime_UTR | 20.0% |
| !! | AGAGAAAGTTGACTTTAATT+TGG | - | chr4_4:32382988-32383007 | None:intergenic | 25.0% |
| ! | TAAACATGGTTGATTAATGA+TGG | - | chr4_4:32383059-32383078 | None:intergenic | 25.0% |
| ! | TACACTTCTTAATGAAAAAC+AGG | + | chr4_4:32383508-32383527 | Msa0677780:CDS | 25.0% |
| ! | TAAATTTGTCATATCGAAAC+CGG | - | chr4_4:32383556-32383575 | None:intergenic | 25.0% |
| ! | CTTATTTGCATAAGTTCATT+AGG | - | chr4_4:32383690-32383709 | None:intergenic | 25.0% |
| ! | TTGTATGAGTTTGGTAAATT+TGG | + | chr4_4:32383953-32383972 | Msa0677780:intron | 25.0% |
| ! | AGTGATGAAATGTAAATTTC+AGG | + | chr4_4:32384182-32384201 | Msa0677780:intron | 25.0% |
| !! | TAAATTTCAGGTCTTTGATT+TGG | + | chr4_4:32384194-32384213 | Msa0677780:intron | 25.0% |
| !! | AAATTTCAGGTCTTTGATTT+GGG | + | chr4_4:32384195-32384214 | Msa0677780:intron | 25.0% |
| !!! | TTCTGATGCAAAATTTTGAT+GGG | + | chr4_4:32384332-32384351 | Msa0677780:intron | 25.0% |
| !! | CAAACAAAGCAAATTTTTGT+TGG | + | chr4_4:32384375-32384394 | Msa0677780:intron | 25.0% |
| !! | AAAGCAAATTTTTGTTGGTA+AGG | + | chr4_4:32384380-32384399 | Msa0677780:intron | 25.0% |
| ! | CTTTATATATACAGAGAAAG+TGG | - | chr4_4:32384802-32384821 | None:intergenic | 25.0% |
| !!! | ATTTTTAGATCAAGTCATGA+AGG | + | chr4_4:32384962-32384981 | Msa0677780:CDS | 25.0% |
| ! | AAAACAGATATTGACAAATC+TGG | - | chr4_4:32385371-32385390 | None:intergenic | 25.0% |
| ! | TTTGTGGATATTAAAACTGA+GGG | + | chr4_4:32385498-32385517 | Msa0677780:intron | 25.0% |
| !! | AAAGAGAAAGTAAGTTGAAT+AGG | - | chr4_4:32385590-32385609 | None:intergenic | 25.0% |
| ! | ATTTAAATGACATACCAAAG+CGG | - | chr4_4:32385791-32385810 | None:intergenic | 25.0% |
| ! | TATTTATACTGGATCATACA+TGG | - | chr4_4:32385869-32385888 | None:intergenic | 25.0% |
| ! | ATGGTAAGAGTTATTTATAC+TGG | - | chr4_4:32385880-32385899 | None:intergenic | 25.0% |
| ! | GTTTAGACCTTAGATTATAT+TGG | + | chr4_4:32386072-32386091 | Msa0677780:intron | 25.0% |
| ! | TTAGACCTTAGATTATATTG+GGG | + | chr4_4:32386074-32386093 | Msa0677780:intron | 25.0% |
| ! | TATCAGTTATTGCTTATGAT+AGG | + | chr4_4:32386137-32386156 | Msa0677780:intron | 25.0% |
| ! | AAATTAACAACGTGTCTATA+CGG | - | chr4_4:32386630-32386649 | None:intergenic | 25.0% |
| !! | AATAATGCAAGCAATTTTAG+AGG | - | chr4_4:32386709-32386728 | None:intergenic | 25.0% |
| ! | TGCCATAAAAAATCTATAGT+TGG | + | chr4_4:32386752-32386771 | Msa0677780:intron | 25.0% |
| !!! | CACCAACTATAGATTTTTTA+TGG | - | chr4_4:32386757-32386776 | None:intergenic | 25.0% |
| !!! | CCAAATAAATTTGGTCTTTT+AGG | - | chr4_4:32386981-32387000 | None:intergenic | 25.0% |
| ! | CCTAAAAGACCAAATTTATT+TGG | + | chr4_4:32386978-32386997 | Msa0677780:intron | 25.0% |
| !! | AAAACAATTATTTAGGACAC+CGG | - | chr4_4:32387407-32387426 | None:intergenic | 25.0% |
| ! | TTGAGAAATGTTGATCAATT+AGG | + | chr4_4:32387574-32387593 | Msa0677780:intron | 25.0% |
| ! | TGAGAAATGTTGATCAATTA+GGG | + | chr4_4:32387575-32387594 | Msa0677780:intron | 25.0% |
| !!! | TCCTATATTTTTTACACTTG+CGG | + | chr4_4:32387790-32387809 | Msa0677780:intron | 25.0% |
| ! | ATGCTGTACATAAAATACAA+TGG | - | chr4_4:32387995-32388014 | None:intergenic | 25.0% |
| ! | AGTAAATGTCTAATACTGTT+AGG | + | chr4_4:32388309-32388328 | Msa0677780:intron | 25.0% |
| !!! | TCCTGTTATTATTAGTTTTG+AGG | + | chr4_4:32388349-32388368 | Msa0677780:intron | 25.0% |
| ! | ACCTCAAAACTAATAATAAC+AGG | - | chr4_4:32388353-32388372 | None:intergenic | 25.0% |
| ! | ATATGATGCAATGAAACATA+GGG | + | chr4_4:32388522-32388541 | Msa0677780:intron | 25.0% |
| !!! | TTGTCTTTTAAAAGGGAAAT+AGG | - | chr4_4:32388587-32388606 | None:intergenic | 25.0% |
| ! | TATCTCGATTCAAACAAAAT+TGG | + | chr4_4:32388660-32388679 | Msa0677780:intron | 25.0% |
| !! | ATGCAAATCACTATCTATTT+TGG | + | chr4_4:32388691-32388710 | Msa0677780:intron | 25.0% |
| ! | TCATGTCATAAATCAAAAGA+AGG | - | chr4_4:32388831-32388850 | None:intergenic | 25.0% |
| ! | CAAAGCAACTACAAATATTA+GGG | - | chr4_4:32389253-32389272 | None:intergenic | 25.0% |
| ! | TCAAAGCAACTACAAATATT+AGG | - | chr4_4:32389254-32389273 | None:intergenic | 25.0% |
| TATCTTTATGAGCATGTACT+CGG | + | chr4_4:32383123-32383142 | Msa0677780:intron | 30.0% | |
| !! | CTTGAACAACTTTAAGATTC+CGG | + | chr4_4:32383349-32383368 | Msa0677780:CDS | 30.0% |
| AAATTTGTCATATCGAAACC+GGG | - | chr4_4:32383555-32383574 | None:intergenic | 30.0% | |
| ATAAGTAAGTCAATCTAGAC+AGG | + | chr4_4:32383851-32383870 | Msa0677780:intron | 30.0% | |
| TGAAAACACTCAGTACATTA+CGG | - | chr4_4:32383878-32383897 | None:intergenic | 30.0% | |
| TCCATGAAATTGTATGAGTT+TGG | + | chr4_4:32383944-32383963 | Msa0677780:intron | 30.0% | |
| ACCAAACTCATACAATTTCA+TGG | - | chr4_4:32383948-32383967 | None:intergenic | 30.0% | |
| !! | TCGATCATTGACTTCTTTAT+GGG | - | chr4_4:32384043-32384062 | None:intergenic | 30.0% |
| !! | ATCGATCATTGACTTCTTTA+TGG | - | chr4_4:32384044-32384063 | None:intergenic | 30.0% |
| !! | AATTTCAGGTCTTTGATTTG+GGG | + | chr4_4:32384196-32384215 | Msa0677780:intron | 30.0% |
| ! | GTTCTGATGCAAAATTTTGA+TGG | + | chr4_4:32384331-32384350 | Msa0677780:intron | 30.0% |
| !! | GCTTTGTTTGCTTACAAAAA+TGG | - | chr4_4:32384365-32384384 | None:intergenic | 30.0% |
| !! | AAATAAATGCTTTAGGTTGC+AGG | + | chr4_4:32384434-32384453 | Msa0677780:intron | 30.0% |
| !! | AATAAATGCTTTAGGTTGCA+GGG | + | chr4_4:32384435-32384454 | Msa0677780:intron | 30.0% |
| ! | AACAATCTACCTTTTGCATT+TGG | + | chr4_4:32384551-32384570 | Msa0677780:CDS | 30.0% |
| !!! | TAGGAAACTGCAGTTTTATT+TGG | + | chr4_4:32384579-32384598 | Msa0677780:intron | 30.0% |
| ! | TTCACATGAAGAGCTTTTAT+TGG | + | chr4_4:32384671-32384690 | Msa0677780:intron | 30.0% |
| ! | TCACATGAAGAGCTTTTATT+GGG | + | chr4_4:32384672-32384691 | Msa0677780:intron | 30.0% |
| TTGCATGTTTACCATTTACT+AGG | + | chr4_4:32384762-32384781 | Msa0677780:intron | 30.0% | |
| GAAATTGGAAACCTAGTAAA+TGG | - | chr4_4:32384776-32384795 | None:intergenic | 30.0% | |
| ATATATACAGAGAAAGTGGT+TGG | - | chr4_4:32384798-32384817 | None:intergenic | 30.0% | |
| AGAATAGAAGCTTAATTGCT+AGG | + | chr4_4:32385400-32385419 | Msa0677780:intron | 30.0% | |
| GAATAGAAGCTTAATTGCTA+GGG | + | chr4_4:32385401-32385420 | Msa0677780:intron | 30.0% | |
| AATAGAAGCTTAATTGCTAG+GGG | + | chr4_4:32385402-32385421 | Msa0677780:intron | 30.0% | |
| GTTTGTGGATATTAAAACTG+AGG | + | chr4_4:32385497-32385516 | Msa0677780:intron | 30.0% | |
| TTGTGGATATTAAAACTGAG+GGG | + | chr4_4:32385499-32385518 | Msa0677780:intron | 30.0% | |
| !! | TTTGTTTCTAACTGTTTCTC+AGG | + | chr4_4:32385607-32385626 | Msa0677780:intron | 30.0% |
| !!! | ATTTTGGAATTACTTCAGCA+TGG | + | chr4_4:32385655-32385674 | Msa0677780:CDS | 30.0% |
| !!! | TTTTGGAATTACTTCAGCAT+GGG | + | chr4_4:32385656-32385675 | Msa0677780:CDS | 30.0% |
| AACTTTATGCTGTGAATTGT+GGG | + | chr4_4:32385717-32385736 | Msa0677780:intron | 30.0% | |
| CATGTAAGAGATCAAAAGAT+TGG | - | chr4_4:32385825-32385844 | None:intergenic | 30.0% | |
| ! | CTTTTGATCTCTTACATGTT+AGG | + | chr4_4:32385827-32385846 | Msa0677780:intron | 30.0% |
| TAGACCTTAGATTATATTGG+GGG | + | chr4_4:32386075-32386094 | Msa0677780:intron | 30.0% | |
| AATTCCCCCAATATAATCTA+AGG | - | chr4_4:32386082-32386101 | None:intergenic | 30.0% | |
| GTTATTGCTTATGATAGGAA+TGG | + | chr4_4:32386142-32386161 | Msa0677780:intron | 30.0% | |
| TCAGTAATTATGTGTGCATA+TGG | + | chr4_4:32386258-32386277 | Msa0677780:intron | 30.0% | |
| GAAATTAGGAACACAATATC+AGG | - | chr4_4:32386374-32386393 | None:intergenic | 30.0% | |
| AATTAACAACGTGTCTATAC+GGG | - | chr4_4:32386629-32386648 | None:intergenic | 30.0% | |
| TGTTGATATTCTATTCCCTA+AGG | - | chr4_4:32386786-32386805 | None:intergenic | 30.0% | |
| AGGGAATAGAATATCAACAT+TGG | + | chr4_4:32386787-32386806 | Msa0677780:intron | 30.0% | |
| GTATATGAAATGGTTTACCT+GGG | - | chr4_4:32387195-32387214 | None:intergenic | 30.0% | |
| AGTATATGAAATGGTTTACC+TGG | - | chr4_4:32387196-32387215 | None:intergenic | 30.0% | |
| TATGAGTGTTATATAGGTGT+CGG | - | chr4_4:32387462-32387481 | None:intergenic | 30.0% | |
| AACTCTTGTATTTATGGTGT+GGG | - | chr4_4:32387545-32387564 | None:intergenic | 30.0% | |
| TAACTCTTGTATTTATGGTG+TGG | - | chr4_4:32387546-32387565 | None:intergenic | 30.0% | |
| GAGAAATGTTGATCAATTAG+GGG | + | chr4_4:32387576-32387595 | Msa0677780:intron | 30.0% | |
| !!! | GTCGTTTTTAACGTTTTTGA+TGG | + | chr4_4:32387622-32387641 | Msa0677780:intron | 30.0% |
| ACCGCAAGTGTAAAAAATAT+AGG | - | chr4_4:32387794-32387813 | None:intergenic | 30.0% | |
| ! | TAACAACGTAAGTTGAGTTT+CGG | - | chr4_4:32387898-32387917 | None:intergenic | 30.0% |
| ! | TGTATTTTATGTACAGCATC+AGG | + | chr4_4:32387996-32388015 | Msa0677780:intron | 30.0% |
| ATACATTTCCATTACAGATC+AGG | - | chr4_4:32388160-32388179 | None:intergenic | 30.0% | |
| ! | TATGAATTTTCTGACAATCC+TGG | - | chr4_4:32388207-32388226 | None:intergenic | 30.0% |
| AATCTCATTCTCAAACTAAC+AGG | - | chr4_4:32388270-32388289 | None:intergenic | 30.0% | |
| TAAAACCAACGATTTCAAGA+AGG | - | chr4_4:32388431-32388450 | None:intergenic | 30.0% | |
| GATATGATGCAATGAAACAT+AGG | + | chr4_4:32388521-32388540 | Msa0677780:intron | 30.0% | |
| ! | AGATAGTGATTTGCATAGAT+TGG | - | chr4_4:32388687-32388706 | None:intergenic | 30.0% |
| CATATAAATCGAGATTCATG+CGG | - | chr4_4:32388727-32388746 | None:intergenic | 30.0% | |
| CAGAGTTGACAAAAAAACAA+GGG | - | chr4_4:32388784-32388803 | None:intergenic | 30.0% | |
| ACAGAGTTGACAAAAAAACA+AGG | - | chr4_4:32388785-32388804 | None:intergenic | 30.0% | |
| AGGAAAAGACAAAAGAGTAA+CGG | - | chr4_4:32388811-32388830 | None:intergenic | 30.0% | |
| TTTAGACTTGCATATATGAG+TGG | - | chr4_4:32389049-32389068 | None:intergenic | 30.0% | |
| GAGAAATATCAACATCATCT+GGG | - | chr4_4:32389185-32389204 | None:intergenic | 30.0% | |
| TGAGAAATATCAACATCATC+TGG | - | chr4_4:32389186-32389205 | None:intergenic | 30.0% | |
| AGTTACTTGAAATCTAAGCA+AGG | - | chr4_4:32389369-32389388 | None:intergenic | 30.0% | |
| ATGTGTATTTGTGTCTGACA+CGG | - | chr4_4:32383205-32383224 | None:intergenic | 35.0% | |
| ! | ATTTTCTCAACCTTGGATTC+CGG | - | chr4_4:32383389-32383408 | None:intergenic | 35.0% |
| ATCCAAGGTTGAGAAAATTG+AGG | + | chr4_4:32383391-32383410 | Msa0677780:CDS | 35.0% | |
| ! | TTCCTCAATTTTCTCAACCT+TGG | - | chr4_4:32383396-32383415 | None:intergenic | 35.0% |
| GTTGAGAAAATTGAGGAATG+TGG | + | chr4_4:32383398-32383417 | Msa0677780:CDS | 35.0% | |
| GAGTTAACAAAAACCAAGAC+AGG | - | chr4_4:32383443-32383462 | None:intergenic | 35.0% | |
| ! | GTTTTTGTTAACTCCAAGAG+TGG | + | chr4_4:32383449-32383468 | Msa0677780:CDS | 35.0% |
| GTGTACGATATGTTTGTAAC+AGG | - | chr4_4:32383493-32383512 | None:intergenic | 35.0% | |
| CAAGTTTGACTATTTGCAAG+AGG | - | chr4_4:32383731-32383750 | None:intergenic | 35.0% | |
| TTGAGTAGTCTAATGATTGC+TGG | + | chr4_4:32383813-32383832 | Msa0677780:intron | 35.0% | |
| GAAAACACTCAGTACATTAC+GGG | - | chr4_4:32383877-32383896 | None:intergenic | 35.0% | |
| AAACTCAGACATGAAGATTG+CGG | - | chr4_4:32383904-32383923 | None:intergenic | 35.0% | |
| TAGTACTTCAAGACAATTGC+AGG | + | chr4_4:32384005-32384024 | Msa0677780:intron | 35.0% | |
| AGTACTTCAAGACAATTGCA+GGG | + | chr4_4:32384006-32384025 | Msa0677780:intron | 35.0% | |
| !! | ATTTCAGGTCTTTGATTTGG+GGG | + | chr4_4:32384197-32384216 | Msa0677780:intron | 35.0% |
| GAGAACAGTCTATGCAAATT+TGG | + | chr4_4:32384242-32384261 | Msa0677780:CDS | 35.0% | |
| ATTTGGAAAGCCTCAAGAAA+CGG | + | chr4_4:32384259-32384278 | Msa0677780:CDS | 35.0% | |
| !! | TGAATTTGCTATGACGATCA+TGG | + | chr4_4:32384287-32384306 | Msa0677780:CDS | 35.0% |
| !! | ATAAATGCTTTAGGTTGCAG+GGG | + | chr4_4:32384436-32384455 | Msa0677780:intron | 35.0% |
| ! | TCTGAAATTATCTCATCCTC+CGG | + | chr4_4:32384499-32384518 | Msa0677780:CDS | 35.0% |
| ! | ATCTACCTTTTGCATTTGGT+TGG | + | chr4_4:32384555-32384574 | Msa0677780:CDS | 35.0% |
| ! | TCTACCTTTTGCATTTGGTT+GGG | + | chr4_4:32384556-32384575 | Msa0677780:CDS | 35.0% |
| CTCTCTCTTAAAACAAGAAG+CGG | - | chr4_4:32384705-32384724 | None:intergenic | 35.0% | |
| !!! | GCTTCTTGTTTTAAGAGAGA+GGG | + | chr4_4:32384704-32384723 | Msa0677780:intron | 35.0% |
| ! | AGAGAGGGAGCATATTATTA+TGG | + | chr4_4:32384719-32384738 | Msa0677780:intron | 35.0% |
| CATCAAAATCAGAGTTACAG+CGG | - | chr4_4:32384868-32384887 | None:intergenic | 35.0% | |
| ! | AACACGTTTTGCTTCTTTAC+AGG | + | chr4_4:32384899-32384918 | Msa0677780:intron | 35.0% |
| ! | ACACGTTTTGCTTCTTTACA+GGG | + | chr4_4:32384900-32384919 | Msa0677780:intron | 35.0% |
| TTAAGTAGCCCAATAACCAT+AGG | - | chr4_4:32385131-32385150 | None:intergenic | 35.0% | |
| TGAAGCGGATGAACTTAATA+GGG | + | chr4_4:32385310-32385329 | Msa0677780:CDS | 35.0% | |
| ATAGAAGCTTAATTGCTAGG+GGG | + | chr4_4:32385403-32385422 | Msa0677780:intron | 35.0% | |
| TGTGGATATTAAAACTGAGG+GGG | + | chr4_4:32385500-32385519 | Msa0677780:intron | 35.0% | |
| ! | TTTCTAACTGTTTCTCAGGA+AGG | + | chr4_4:32385611-32385630 | Msa0677780:intron | 35.0% |
| CAATTCACAGCATAAAGTTC+AGG | - | chr4_4:32385716-32385735 | None:intergenic | 35.0% | |
| GAACTTTATGCTGTGAATTG+TGG | + | chr4_4:32385716-32385735 | Msa0677780:intron | 35.0% | |
| !! | AATTCATTTTGTTGCCGCTT+TGG | + | chr4_4:32385774-32385793 | Msa0677780:intron | 35.0% |
| CAAAAACCAATTGGTGAATC+AGG | + | chr4_4:32386220-32386239 | Msa0677780:CDS | 35.0% | |
| TTAAGAGTCAGAGTCAAACA+AGG | - | chr4_4:32386291-32386310 | None:intergenic | 35.0% | |
| TAGGAAAGGAAACAGTTACA+GGG | - | chr4_4:32386593-32386612 | None:intergenic | 35.0% | |
| ATTAACAACGTGTCTATACG+GGG | - | chr4_4:32386628-32386647 | None:intergenic | 35.0% | |
| !! | ATAGTTGGTGATGAATCCTT+AGG | + | chr4_4:32386767-32386786 | Msa0677780:intron | 35.0% |
| !! | TAGTTGGTGATGAATCCTTA+GGG | + | chr4_4:32386768-32386787 | Msa0677780:intron | 35.0% |
| ! | GCATTGTCATTTGCATACAT+AGG | + | chr4_4:32387072-32387091 | Msa0677780:intron | 35.0% |
| GATTCTTTAATGCAGGAACA+TGG | + | chr4_4:32387107-32387126 | Msa0677780:intron | 35.0% | |
| GTAAAGATCATGCAAAAACC+TGG | + | chr4_4:32387144-32387163 | Msa0677780:CDS | 35.0% | |
| TTTGTCAAGTTAGCAATGCT+GGG | - | chr4_4:32387278-32387297 | None:intergenic | 35.0% | |
| TGACAAAGATCTATGAAGCA+CGG | + | chr4_4:32387291-32387310 | Msa0677780:intron | 35.0% | |
| TAACATATATGTAGCGGTGT+AGG | + | chr4_4:32387765-32387784 | Msa0677780:intron | 35.0% | |
| TGATCTTTGTCTATGAAGCA+TGG | - | chr4_4:32387863-32387882 | None:intergenic | 35.0% | |
| TGTTATCAACAAGTAAACCG+AGG | - | chr4_4:32387958-32387977 | None:intergenic | 35.0% | |
| TTAAATCCACCAGAAAAGCT+TGG | - | chr4_4:32388043-32388062 | None:intergenic | 35.0% | |
| !! | TTTCTGGTGGATTTAATCCA+TGG | + | chr4_4:32388047-32388066 | Msa0677780:CDS | 35.0% |
| !! | TTCTGGTGGATTTAATCCAT+GGG | + | chr4_4:32388048-32388067 | Msa0677780:CDS | 35.0% |
| GGAGAGGAAACAAAAGAATT+AGG | - | chr4_4:32388116-32388135 | None:intergenic | 35.0% | |
| CATTTGAACCTGATCTGTAA+TGG | + | chr4_4:32388149-32388168 | Msa0677780:intron | 35.0% | |
| TGGTCTGTATGGTAATTGTT+GGG | - | chr4_4:32388187-32388206 | None:intergenic | 35.0% | |
| !!! | TCGTTGGTTTTAGAAATGCA+TGG | + | chr4_4:32388439-32388458 | Msa0677780:CDS | 35.0% |
| TCGCATAACAACGATAACTA+TGG | - | chr4_4:32388627-32388646 | None:intergenic | 35.0% | |
| TCTATGTGCCTAATGAAACA+GGG | - | chr4_4:32388887-32388906 | None:intergenic | 35.0% | |
| TTCTATGTGCCTAATGAAAC+AGG | - | chr4_4:32388888-32388907 | None:intergenic | 35.0% | |
| TTCATTAGGCACATAGAATC+CGG | + | chr4_4:32388890-32388909 | Msa0677780:intron | 35.0% | |
| CATACATTCATGAGGATTGA+TGG | + | chr4_4:32388940-32388959 | Msa0677780:CDS | 35.0% | |
| TGTCATCTTCTTCATTGTCA+TGG | - | chr4_4:32389098-32389117 | None:intergenic | 35.0% | |
| ACTGCAAGAATTGAGCAAAT+TGG | - | chr4_4:32389294-32389313 | None:intergenic | 35.0% | |
| ATAGTTGAGGGGGAAATATT+GGG | - | chr4_4:32389346-32389365 | None:intergenic | 35.0% | |
| ATCTAAGCAAGGATAGTTGA+GGG | - | chr4_4:32389358-32389377 | None:intergenic | 35.0% | |
| AATCTAAGCAAGGATAGTTG+AGG | - | chr4_4:32389359-32389378 | None:intergenic | 35.0% | |
| AAACCTGAATCATAGTACCA+GGG | - | chr4_4:32389399-32389418 | None:intergenic | 35.0% | |
| ! | TTCTCTTAGCATTGGGATTC+GGG | - | chr4_4:32382886-32382905 | None:intergenic | 40.0% |
| ! | CTTCTCTTAGCATTGGGATT+CGG | - | chr4_4:32382887-32382906 | None:intergenic | 40.0% |
| AGGGATCTTCTCTTAGCATT+GGG | - | chr4_4:32382893-32382912 | None:intergenic | 40.0% | |
| TCATGTGGAAGGAATTACGA+GGG | - | chr4_4:32382912-32382931 | None:intergenic | 40.0% | |
| TTCATGTGGAAGGAATTACG+AGG | - | chr4_4:32382913-32382932 | None:intergenic | 40.0% | |
| AAGGGAAAAGTTCATGTGGA+AGG | - | chr4_4:32382923-32382942 | None:intergenic | 40.0% | |
| TGGAAAGGGAAAAGTTCATG+TGG | - | chr4_4:32382927-32382946 | None:intergenic | 40.0% | |
| TTCAATCTCATTCCATCTCC+AGG | + | chr4_4:32383010-32383029 | Msa0677780:five_prime_UTR | 40.0% | |
| ! | TGGTTGATTAATGATGGCGA+TGG | - | chr4_4:32383053-32383072 | None:intergenic | 40.0% |
| TCCGGATTACATTCTTGTAC+CGG | + | chr4_4:32383367-32383386 | Msa0677780:CDS | 40.0% | |
| TCCGGTACAAGAATGTAATC+CGG | - | chr4_4:32383371-32383390 | None:intergenic | 40.0% | |
| AAAACCAAGACAGGACACTT+AGG | - | chr4_4:32383434-32383453 | None:intergenic | 40.0% | |
| TTTGTTAACTCCAAGAGTGG+TGG | + | chr4_4:32383452-32383471 | Msa0677780:CDS | 40.0% | |
| !! | TCTGAGTTTGCTGATAAACG+CGG | + | chr4_4:32383915-32383934 | Msa0677780:intron | 40.0% |
| TTTGGAAAGCCTCAAGAAAC+GGG | + | chr4_4:32384260-32384279 | Msa0677780:CDS | 40.0% | |
| !! | TAAATGCTTTAGGTTGCAGG+GGG | + | chr4_4:32384437-32384456 | Msa0677780:intron | 40.0% |
| !!! | CGCTTCTTGTTTTAAGAGAG+AGG | + | chr4_4:32384703-32384722 | Msa0677780:intron | 40.0% |
| CAGAGAAAGTGGTTGGAAAT+TGG | - | chr4_4:32384791-32384810 | None:intergenic | 40.0% | |
| ! | CACGTTTTGCTTCTTTACAG+GGG | + | chr4_4:32384901-32384920 | Msa0677780:intron | 40.0% |
| AGATCAAGTCATGAAGGCAA+AGG | + | chr4_4:32384968-32384987 | Msa0677780:CDS | 40.0% | |
| ! | GGTTCTTTTAATGCTTCAGC+TGG | + | chr4_4:32385189-32385208 | Msa0677780:intron | 40.0% |
| TCAGCTGGCATATTCTTATG+AGG | + | chr4_4:32385204-32385223 | Msa0677780:intron | 40.0% | |
| CTTTCATCGTGTATCTGAAG+CGG | + | chr4_4:32385295-32385314 | Msa0677780:CDS | 40.0% | |
| CTGAAGCGGATGAACTTAAT+AGG | + | chr4_4:32385309-32385328 | Msa0677780:CDS | 40.0% | |
| GTGGATATTAAAACTGAGGG+GGG | + | chr4_4:32385501-32385520 | Msa0677780:intron | 40.0% | |
| !! | GGGACAGTACTTATTTTCCA+TGG | + | chr4_4:32385521-32385540 | Msa0677780:intron | 40.0% |
| ATTCCAAAATCCACCACGAA+AGG | - | chr4_4:32385645-32385664 | None:intergenic | 40.0% | |
| ! | GTTCAGGTTCAGAAGAAATG+AGG | - | chr4_4:32385700-32385719 | None:intergenic | 40.0% |
| TGCATACCTGATTCACCAAT+TGG | - | chr4_4:32386229-32386248 | None:intergenic | 40.0% | |
| TAGAGTACGTATGCTAAGCT+TGG | + | chr4_4:32386405-32386424 | Msa0677780:intron | 40.0% | |
| ! | GGAAGAAGGATGCTTTAAAC+CGG | - | chr4_4:32386454-32386473 | None:intergenic | 40.0% |
| ! | GTTTAAAGCATCCTTCTTCC+AGG | + | chr4_4:32386454-32386473 | Msa0677780:CDS | 40.0% |
| AGGAAAGGAAACAGTTACAG+GGG | - | chr4_4:32386592-32386611 | None:intergenic | 40.0% | |
| CTAGGAAAGGAAACAGTTAC+AGG | - | chr4_4:32386594-32386613 | None:intergenic | 40.0% | |
| ! | TTTTTATGGCAAAGCCGCAT+TGG | - | chr4_4:32386743-32386762 | None:intergenic | 40.0% |
| GGTGGTTAATGATTGGAACA+AGG | + | chr4_4:32386905-32386924 | Msa0677780:intron | 40.0% | |
| TCATGCAAAAACCTGGTCAA+TGG | + | chr4_4:32387151-32387170 | Msa0677780:CDS | 40.0% | |
| ! | TTTACCTGGGAGGTATGTTT+AGG | - | chr4_4:32387182-32387201 | None:intergenic | 40.0% |
| TATGAAATGGTTTACCTGGG+AGG | - | chr4_4:32387192-32387211 | None:intergenic | 40.0% | |
| TTGTCAAGTTAGCAATGCTG+GGG | - | chr4_4:32387277-32387296 | None:intergenic | 40.0% | |
| CTTTGTCAAGTTAGCAATGC+TGG | - | chr4_4:32387279-32387298 | None:intergenic | 40.0% | |
| GGCTCGTATGAGTGTTATAT+AGG | - | chr4_4:32387468-32387487 | None:intergenic | 40.0% | |
| TAAACCGAGGAAAAGGCAAT+AGG | - | chr4_4:32387945-32387964 | None:intergenic | 40.0% | |
| CAACAAGTAAACCGAGGAAA+AGG | - | chr4_4:32387952-32387971 | None:intergenic | 40.0% | |
| !!! | CTTAACTTGCCAAGCTTTTC+TGG | + | chr4_4:32388031-32388050 | Msa0677780:CDS | 40.0% |
| !! | TCTGGTGGATTTAATCCATG+GGG | + | chr4_4:32388049-32388068 | Msa0677780:CDS | 40.0% |
| !! | CTTTTGTTTCCTCTCCTTTC+TGG | + | chr4_4:32388120-32388139 | Msa0677780:intron | 40.0% |
| CTGGTCTGTATGGTAATTGT+TGG | - | chr4_4:32388188-32388207 | None:intergenic | 40.0% | |
| CAACAATTACCATACAGACC+AGG | + | chr4_4:32388186-32388205 | Msa0677780:intron | 40.0% | |
| !!! | GGTTTTAGAAATGCATGGCA+TGG | + | chr4_4:32388444-32388463 | Msa0677780:CDS | 40.0% |
| !!! | CTTGTTTTGCTTGCTCCAAA+AGG | + | chr4_4:32388468-32388487 | Msa0677780:CDS | 40.0% |
| CTATGTGCCTAATGAAACAG+GGG | - | chr4_4:32388886-32388905 | None:intergenic | 40.0% | |
| !! | ATCCGGTTTGAGTTTTGCAA+AGG | + | chr4_4:32388907-32388926 | Msa0677780:CDS | 40.0% |
| CACCTTTGCAAAACTCAAAC+CGG | - | chr4_4:32388912-32388931 | None:intergenic | 40.0% | |
| GAGCAGATCATACATTCATG+AGG | + | chr4_4:32388932-32388951 | Msa0677780:CDS | 40.0% | |
| TCTTCTTCATTGTCATGGTG+TGG | - | chr4_4:32389093-32389112 | None:intergenic | 40.0% | |
| TAGTTGAGGGGGAAATATTG+GGG | - | chr4_4:32389345-32389364 | None:intergenic | 40.0% | |
| GATAGTTGAGGGGGAAATAT+TGG | - | chr4_4:32389347-32389366 | None:intergenic | 40.0% | |
| TCTAAGCAAGGATAGTTGAG+GGG | - | chr4_4:32389357-32389376 | None:intergenic | 40.0% | |
| CAAACCTGAATCATAGTACC+AGG | - | chr4_4:32389400-32389419 | None:intergenic | 40.0% | |
| ! | CTGGTACTATGATTCAGGTT+TGG | + | chr4_4:32389398-32389417 | Msa0677780:three_prime_UTR | 40.0% |
| GAGGGATCTTCTCTTAGCAT+TGG | - | chr4_4:32382894-32382913 | None:intergenic | 45.0% | |
| TATGTGTGTGTACCTGGAGA+TGG | - | chr4_4:32383025-32383044 | None:intergenic | 45.0% | |
| GATGAGTATGTGTGTGTACC+TGG | - | chr4_4:32383031-32383050 | None:intergenic | 45.0% | |
| CATTCTTGTACCGGAATCCA+AGG | + | chr4_4:32383376-32383395 | Msa0677780:CDS | 45.0% | |
| TTGGAAAGCCTCAAGAAACG+GGG | + | chr4_4:32384261-32384280 | Msa0677780:CDS | 45.0% | |
| ATTCATCACCCCGTTTCTTG+AGG | - | chr4_4:32384272-32384291 | None:intergenic | 45.0% | |
| TTGCTATGACGATCATGGAG+AGG | + | chr4_4:32384292-32384311 | Msa0677780:CDS | 45.0% | |
| AAGGGAACAGTAGCTATTGC+CGG | - | chr4_4:32384521-32384540 | None:intergenic | 45.0% | |
| GCAATAGCTACTGTTCCCTT+GGG | + | chr4_4:32384521-32384540 | Msa0677780:CDS | 45.0% | |
| CCTACCCAACCAAATGCAAA+AGG | - | chr4_4:32384563-32384582 | None:intergenic | 45.0% | |
| ! | CCTTTTGCATTTGGTTGGGT+AGG | + | chr4_4:32384560-32384579 | Msa0677780:intron | 45.0% |
| ! | TGAAGAGCTTTTATTGGGCC+TGG | + | chr4_4:32384677-32384696 | Msa0677780:intron | 45.0% |
| TTAAAACAAGAAGCGGCACC+AGG | - | chr4_4:32384698-32384717 | None:intergenic | 45.0% | |
| GAGTTACAGCGGAAAACTTC+AGG | - | chr4_4:32384857-32384876 | None:intergenic | 45.0% | |
| TTACAGGGGAAGAAGAATCC+AGG | + | chr4_4:32384915-32384934 | Msa0677780:intron | 45.0% | |
| TACAGGGGAAGAAGAATCCA+GGG | + | chr4_4:32384916-32384935 | Msa0677780:intron | 45.0% | |
| AGCTACGGACCTATGGTTAT+TGG | + | chr4_4:32385119-32385138 | Msa0677780:intron | 45.0% | |
| GCTACGGACCTATGGTTATT+GGG | + | chr4_4:32385120-32385139 | Msa0677780:intron | 45.0% | |
| GGATCACAGGAACCTTCTTT+GGG | - | chr4_4:32385239-32385258 | None:intergenic | 45.0% | |
| TGGATCACAGGAACCTTCTT+TGG | - | chr4_4:32385240-32385259 | None:intergenic | 45.0% | |
| ! | TGAAAGGCATGCAGAGAATG+TGG | - | chr4_4:32385281-32385300 | None:intergenic | 45.0% |
| CGCTTCAGATACACGATGAA+AGG | - | chr4_4:32385297-32385316 | None:intergenic | 45.0% | |
| AAAATCCACCACGAAAGGTG+TGG | - | chr4_4:32385640-32385659 | None:intergenic | 45.0% | |
| !!! | ACACCTTTCGTGGTGGATTT+TGG | + | chr4_4:32385639-32385658 | Msa0677780:CDS | 45.0% |
| !!! | ACGCAAGGTTGGTTTTTTGC+CGG | + | chr4_4:32386432-32386451 | Msa0677780:CDS | 45.0% |
| TAGTGAACTGACCTGGAAGA+AGG | - | chr4_4:32386468-32386487 | None:intergenic | 45.0% | |
| CAGATCTTAGTGAACTGACC+TGG | - | chr4_4:32386475-32386494 | None:intergenic | 45.0% | |
| ! | ATTTTCTGCACATGCCCATC+TGG | + | chr4_4:32386670-32386689 | Msa0677780:intron | 45.0% |
| ! | TTTTCTGCACATGCCCATCT+GGG | + | chr4_4:32386671-32386690 | Msa0677780:intron | 45.0% |
| GAGCTAACAAGTTCCCAGAT+GGG | - | chr4_4:32386687-32386706 | None:intergenic | 45.0% | |
| !! | ATTATGGGCACTGACCAATG+CGG | + | chr4_4:32386726-32386745 | Msa0677780:intron | 45.0% |
| GTAAATGCTGGTCAGAGACT+CGG | + | chr4_4:32386884-32386903 | Msa0677780:intron | 45.0% | |
| !! | GAGACTCGGTGGTTAATGAT+TGG | + | chr4_4:32386898-32386917 | Msa0677780:intron | 45.0% |
| TTTAGGTCTTGCCATTGACC+AGG | - | chr4_4:32387165-32387184 | None:intergenic | 45.0% | |
| AAGACCTAAACATACCTCCC+AGG | + | chr4_4:32387175-32387194 | Msa0677780:CDS | 45.0% | |
| ! | TACGAGTGTCATAGGAGTGT+TGG | - | chr4_4:32387370-32387389 | None:intergenic | 45.0% |
| TTTGTCTGAGTTGTCCGACA+CGG | - | chr4_4:32387489-32387508 | None:intergenic | 45.0% | |
| ! | AACTTGCCAAGCTTTTCTGG+TGG | + | chr4_4:32388034-32388053 | Msa0677780:CDS | 45.0% |
| TTCAAATGCCAGTGCCAGAA+AGG | - | chr4_4:32388137-32388156 | None:intergenic | 45.0% | |
| TCTGACAATCCTGGTCTGTA+TGG | - | chr4_4:32388198-32388217 | None:intergenic | 45.0% | |
| AGATTTGACACCGCCATATG+TGG | + | chr4_4:32388398-32388417 | Msa0677780:CDS | 45.0% | |
| AGAAGGCCATCATCCACATA+TGG | - | chr4_4:32388414-32388433 | None:intergenic | 45.0% | |
| GATGGCCTTCTTGAAATCGT+TGG | + | chr4_4:32388423-32388442 | Msa0677780:CDS | 45.0% | |
| TTGCTTGCTCCAAAAGGACA+TGG | + | chr4_4:32388474-32388493 | Msa0677780:CDS | 45.0% | |
| ! | AGACGAGTTCCATGTCCTTT+TGG | - | chr4_4:32388486-32388505 | None:intergenic | 45.0% |
| TCCTTCTCCCCTGTTTCATT+AGG | + | chr4_4:32388876-32388895 | Msa0677780:intron | 45.0% | |
| !! | CGGTTTGAGTTTTGCAAAGG+TGG | + | chr4_4:32388910-32388929 | Msa0677780:CDS | 45.0% |
| TGAGGATTGATGGAGAACCT+TGG | + | chr4_4:32388950-32388969 | Msa0677780:CDS | 45.0% | |
| GTATCATCATCAGCTGGAAG+AGG | - | chr4_4:32388982-32389001 | None:intergenic | 45.0% | |
| GTGAGAAATCTCTACCACGA+CGG | - | chr4_4:32389004-32389023 | None:intergenic | 45.0% | |
| GTGGTAGAGATTTCTCACCT+TGG | + | chr4_4:32389006-32389025 | Msa0677780:CDS | 45.0% | |
| AGAGATTTCTCACCTTGGTC+AGG | + | chr4_4:32389011-32389030 | Msa0677780:CDS | 45.0% | |
| CAAGCATGTTAACCTGACCA+AGG | - | chr4_4:32389026-32389045 | None:intergenic | 45.0% | |
| ! | TTGTCATGGTGTGGTGATGA+AGG | - | chr4_4:32389084-32389103 | None:intergenic | 45.0% |
| GACAGTGATGAAGAAGACAC+TGG | + | chr4_4:32389114-32389133 | Msa0677780:CDS | 45.0% | |
| ACACTGGAGCAGAGGAATAT+CGG | + | chr4_4:32389130-32389149 | Msa0677780:CDS | 45.0% | |
| GCAGAGGAATATCGGAAGTT+TGG | + | chr4_4:32389138-32389157 | Msa0677780:CDS | 45.0% | |
| !! | ATATCGGAAGTTTGGTGCAG+CGG | + | chr4_4:32389146-32389165 | Msa0677780:CDS | 45.0% |
| CTAAGCAAGGATAGTTGAGG+GGG | - | chr4_4:32389356-32389375 | None:intergenic | 45.0% | |
| TCAAGTAACTCTAACGACCC+TGG | + | chr4_4:32389379-32389398 | Msa0677780:three_prime_UTR | 45.0% | |
| !!! | ATTTCAAAATTTAATTTAAT+AGG | - | chr4_4:32385986-32386005 | None:intergenic | 5.0% |
| !! | AAATTTATCTATTAAAAAAA+TGG | - | chr4_4:32389445-32389464 | None:intergenic | 5.0% |
| !!! | ATTTAAGTATAATAAATTTT+AGG | + | chr4_4:32389461-32389480 | Msa0677780:three_prime_UTR | 5.0% |
| TGTGCAGCTGCATGCAACAA+TGG | + | chr4_4:32383316-32383335 | Msa0677780:intron | 50.0% | |
| TGTGCCTAAGTGTCCTGTCT+TGG | + | chr4_4:32383427-32383446 | Msa0677780:CDS | 50.0% | |
| ACTGTTCTCAGCGCCTTATC+AGG | - | chr4_4:32384231-32384250 | None:intergenic | 50.0% | |
| GGCAATAGCTACTGTTCCCT+TGG | + | chr4_4:32384520-32384539 | Msa0677780:CDS | 50.0% | |
| AGATTGTTCCCTGTGCCCAA+GGG | - | chr4_4:32384539-32384558 | None:intergenic | 50.0% | |
| TAGATTGTTCCCTGTGCCCA+AGG | - | chr4_4:32384540-32384559 | None:intergenic | 50.0% | |
| GTGGCAGTTTGCATCAAGTC+AGG | - | chr4_4:32385096-32385115 | None:intergenic | 50.0% | |
| ! | GCAAACTGCCACTTGAGCTA+CGG | + | chr4_4:32385104-32385123 | Msa0677780:intron | 50.0% |
| AGGATGAGAGCTCCCAAAGA+AGG | + | chr4_4:32385224-32385243 | Msa0677780:CDS | 50.0% | |
| AAGTGGCGCAATTGGATCAC+AGG | - | chr4_4:32385252-32385271 | None:intergenic | 50.0% | |
| AGAGAATGTGGCAGCTCAAG+TGG | - | chr4_4:32385269-32385288 | None:intergenic | 50.0% | |
| GGTGGGGATAAGTCTAGGAA+AGG | - | chr4_4:32386607-32386626 | None:intergenic | 50.0% | |
| ACAACGTGTCTATACGGGGT+GGG | - | chr4_4:32386624-32386643 | None:intergenic | 50.0% | |
| AACAACGTGTCTATACGGGG+TGG | - | chr4_4:32386625-32386644 | None:intergenic | 50.0% | |
| GGAGCTAACAAGTTCCCAGA+TGG | - | chr4_4:32386688-32386707 | None:intergenic | 50.0% | |
| ATCTATGAAGCACGGAGCCA+CGG | + | chr4_4:32387299-32387318 | Msa0677780:intron | 50.0% | |
| ACGTGTCGTACGAGTGTCAT+AGG | - | chr4_4:32387378-32387397 | None:intergenic | 50.0% | |
| AACACTCATACGAGCCGTGT+CGG | + | chr4_4:32387472-32387491 | Msa0677780:intron | 50.0% | |
| ATGAAGCATGGACTCCGACA+CGG | - | chr4_4:32387851-32387870 | None:intergenic | 50.0% | |
| TAGGCAGCAGACAAAAGAGC+AGG | - | chr4_4:32387926-32387945 | None:intergenic | 50.0% | |
| ! | GCTGCCTATTGCCTTTTCCT+CGG | + | chr4_4:32387938-32387957 | Msa0677780:intron | 50.0% |
| TCACGTTGCTTCTTCCTGCT+GGG | - | chr4_4:32388079-32388098 | None:intergenic | 50.0% | |
| ATCACGTTGCTTCTTCCTGC+TGG | - | chr4_4:32388080-32388099 | None:intergenic | 50.0% | |
| ! | TTTCCTCTCCTTTCTGGCAC+TGG | + | chr4_4:32388126-32388145 | Msa0677780:intron | 50.0% |
| ACACCGCCATATGTGGATGA+TGG | + | chr4_4:32388405-32388424 | Msa0677780:CDS | 50.0% | |
| AGGCCATCATCCACATATGG+CGG | - | chr4_4:32388411-32388430 | None:intergenic | 50.0% | |
| ACATGGAACTCGTCTTGCTC+AGG | + | chr4_4:32388491-32388510 | Msa0677780:CDS | 50.0% | |
| GCCTAATGAAACAGGGGAGA+AGG | - | chr4_4:32388880-32388899 | None:intergenic | 50.0% | |
| ! | GCTGGAAGAGGTTGTTTCCA+AGG | - | chr4_4:32388970-32388989 | None:intergenic | 50.0% |
| ACGACGGTATCATCATCAGC+TGG | - | chr4_4:32388988-32389007 | None:intergenic | 50.0% | |
| ! | AGCTGATGATGATACCGTCG+TGG | + | chr4_4:32388987-32389006 | Msa0677780:CDS | 50.0% |
| TGAAGAAGACACTGGAGCAG+AGG | + | chr4_4:32389122-32389141 | Msa0677780:CDS | 50.0% | |
| CGACCCTGGTACTATGATTC+AGG | + | chr4_4:32389393-32389412 | Msa0677780:three_prime_UTR | 50.0% | |
| AATGGACACACAAGCTCGAG+AGG | - | chr4_4:32389427-32389446 | None:intergenic | 50.0% | |
| TCCAAGAGTGGTGGTCAGCT+TGG | + | chr4_4:32383461-32383480 | Msa0677780:CDS | 55.0% | |
| TCCAAGCTGACCACCACTCT+TGG | - | chr4_4:32383465-32383484 | None:intergenic | 55.0% | |
| AAGAGTGGTGGTCAGCTTGG+AGG | + | chr4_4:32383464-32383483 | Msa0677780:CDS | 55.0% | |
| AGAGTGGTGGTCAGCTTGGA+GGG | + | chr4_4:32383465-32383484 | Msa0677780:CDS | 55.0% | |
| GGGGGAAACTGCTCCTGATA+AGG | + | chr4_4:32384215-32384234 | Msa0677780:CDS | 55.0% | |
| GGAACAGTAGCTATTGCCGG+AGG | - | chr4_4:32384518-32384537 | None:intergenic | 55.0% | |
| CTACTGTTCCCTTGGGCACA+GGG | + | chr4_4:32384528-32384547 | Msa0677780:CDS | 55.0% | |
| !! | ACTGAGCGTTGATCTGTCCC+TGG | - | chr4_4:32384936-32384955 | None:intergenic | 55.0% |
| AGGGACAGATCAACGCTCAG+TGG | + | chr4_4:32384935-32384954 | Msa0677780:CDS | 55.0% | |
| GACAGATCAACGCTCAGTGG+TGG | + | chr4_4:32384938-32384957 | Msa0677780:CDS | 55.0% | |
| CCATAGGTCCGTAGCTCAAG+TGG | - | chr4_4:32385115-32385134 | None:intergenic | 55.0% | |
| CCACTTGAGCTACGGACCTA+TGG | + | chr4_4:32385112-32385131 | Msa0677780:intron | 55.0% | |
| GAAGGTTGCCACACCTTTCG+TGG | + | chr4_4:32385629-32385648 | Msa0677780:CDS | 55.0% | |
| GCTAAGCTTGGATGCACGCA+AGG | + | chr4_4:32386417-32386436 | Msa0677780:CDS | 55.0% | |
| AGCTTGGATGCACGCAAGGT+TGG | + | chr4_4:32386421-32386440 | Msa0677780:CDS | 55.0% | |
| TACGGGGTGGGGATAAGTCT+AGG | - | chr4_4:32386612-32386631 | None:intergenic | 55.0% | |
| CAACGTGTCTATACGGGGTG+GGG | - | chr4_4:32386623-32386642 | None:intergenic | 55.0% | |
| AATGCTGGTCAGAGACTCGG+TGG | + | chr4_4:32386887-32386906 | Msa0677780:intron | 55.0% | |
| !! | CTCTAGGACTAGGCATGTCG+CGG | + | chr4_4:32387326-32387345 | Msa0677780:intron | 55.0% |
| TCGTACGACACGTGTCGAAC+CGG | + | chr4_4:32387385-32387404 | Msa0677780:intron | 55.0% | |
| !! | AGGTGTCGGACACTGATCGT+AGG | - | chr4_4:32387448-32387467 | None:intergenic | 55.0% |
| CACCTGACACGACACTGACA+CGG | - | chr4_4:32387827-32387846 | None:intergenic | 55.0% | |
| ATGCCAGTGCCAGAAAGGAG+AGG | - | chr4_4:32388132-32388151 | None:intergenic | 55.0% | |
| GAGTGGTGGTCAGCTTGGAG+GGG | + | chr4_4:32383466-32383485 | Msa0677780:CDS | 60.0% | |
| !! | CTTTAGGTTGCAGGGGGCGA+TGG | + | chr4_4:32384443-32384462 | Msa0677780:intron | 60.0% |
| ! | GGAACAGCAGGCTGGCTACT+TGG | + | chr4_4:32384464-32384483 | Msa0677780:CDS | 60.0% |
| GCTACTGTTCCCTTGGGCAC+AGG | + | chr4_4:32384527-32384546 | Msa0677780:CDS | 60.0% | |
| GGCAGCTCAAGTGGCGCAAT+TGG | - | chr4_4:32385260-32385279 | None:intergenic | 60.0% | |
| GGTTGCCACACCTTTCGTGG+TGG | + | chr4_4:32385632-32385651 | Msa0677780:CDS | 60.0% | |
| !! | CCTAGTCCTAGAGGTGTCCG+TGG | - | chr4_4:32387319-32387338 | None:intergenic | 60.0% |
| !! | CCACGGACACCTCTAGGACT+AGG | + | chr4_4:32387316-32387335 | Msa0677780:intron | 60.0% |
| CGCGACATGCCTAGTCCTAG+AGG | - | chr4_4:32387328-32387347 | None:intergenic | 60.0% | |
| GTCCGTGTCAGTGTCGTGTC+AGG | + | chr4_4:32387822-32387841 | Msa0677780:intron | 60.0% | |
| GTCGTGTCAGGTGTCCGTGT+CGG | + | chr4_4:32387834-32387853 | Msa0677780:intron | 60.0% | |
| ATCCATGGGGTACACCCAGC+AGG | + | chr4_4:32388062-32388081 | Msa0677780:CDS | 60.0% | |
| TTCCTGCTGGGTGTACCCCA+TGG | - | chr4_4:32388067-32388086 | None:intergenic | 60.0% | |
| CAAGGGCTGCTACACAGCTC+AGG | - | chr4_4:32388767-32388786 | None:intergenic | 60.0% | |
| ACGGAGCCACGGACACCTCT+AGG | + | chr4_4:32387310-32387329 | Msa0677780:intron | 65.0% | |
| TCGCGGTGTCTGACACGCGT+CGG | + | chr4_4:32387343-32387362 | Msa0677780:intron | 65.0% | |
| GCAGGGGGCGATGGAACAGC+AGG | + | chr4_4:32384452-32384471 | Msa0677780:CDS | 70.0% | |
| GGGGCGATGGAACAGCAGGC+TGG | + | chr4_4:32384456-32384475 | Msa0677780:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 32382876 | 32389488 | 32382876 | ID=Msa0677780;Name=Msa0677780 |
| chr4_4 | mRNA | 32382876 | 32389488 | 32382876 | ID=Msa0677780-mRNA-1;Parent=Msa0677780;Name=Msa0677780-mRNA-1;_AED=0.38;_eAED=0.38;_QI=168|1|1|1|0.91|0.84|13|273|484 |
| chr4_4 | exon | 32382876 | 32383031 | 32382876 | ID=Msa0677780-mRNA-1:exon:7952;Parent=Msa0677780-mRNA-1 |
| chr4_4 | exon | 32383323 | 32383529 | 32383323 | ID=Msa0677780-mRNA-1:exon:7953;Parent=Msa0677780-mRNA-1 |
| chr4_4 | exon | 32384204 | 32384326 | 32384204 | ID=Msa0677780-mRNA-1:exon:7954;Parent=Msa0677780-mRNA-1 |
| chr4_4 | exon | 32384449 | 32384577 | 32384449 | ID=Msa0677780-mRNA-1:exon:7955;Parent=Msa0677780-mRNA-1 |
| chr4_4 | exon | 32384921 | 32385006 | 32384921 | ID=Msa0677780-mRNA-1:exon:7956;Parent=Msa0677780-mRNA-1 |
| chr4_4 | exon | 32385208 | 32385331 | 32385208 | ID=Msa0677780-mRNA-1:exon:7957;Parent=Msa0677780-mRNA-1 |
| chr4_4 | exon | 32385629 | 32385677 | 32385629 | ID=Msa0677780-mRNA-1:exon:7958;Parent=Msa0677780-mRNA-1 |
| chr4_4 | exon | 32386159 | 32386241 | 32386159 | ID=Msa0677780-mRNA-1:exon:7959;Parent=Msa0677780-mRNA-1 |
| chr4_4 | exon | 32386408 | 32386475 | 32386408 | ID=Msa0677780-mRNA-1:exon:7960;Parent=Msa0677780-mRNA-1 |
| chr4_4 | exon | 32387122 | 32387196 | 32387122 | ID=Msa0677780-mRNA-1:exon:7961;Parent=Msa0677780-mRNA-1 |
| chr4_4 | exon | 32388012 | 32388099 | 32388012 | ID=Msa0677780-mRNA-1:exon:7962;Parent=Msa0677780-mRNA-1 |
| chr4_4 | exon | 32388396 | 32388512 | 32388396 | ID=Msa0677780-mRNA-1:exon:7963;Parent=Msa0677780-mRNA-1 |
| chr4_4 | exon | 32388898 | 32389488 | 32388898 | ID=Msa0677780-mRNA-1:exon:7964;Parent=Msa0677780-mRNA-1 |
| chr4_4 | five_prime_UTR | 32382876 | 32383031 | 32382876 | ID=Msa0677780-mRNA-1:five_prime_utr;Parent=Msa0677780-mRNA-1 |
| chr4_4 | five_prime_UTR | 32383323 | 32383334 | 32383323 | ID=Msa0677780-mRNA-1:five_prime_utr;Parent=Msa0677780-mRNA-1 |
| chr4_4 | CDS | 32383335 | 32383529 | 32383335 | ID=Msa0677780-mRNA-1:cds;Parent=Msa0677780-mRNA-1 |
| chr4_4 | CDS | 32384204 | 32384326 | 32384204 | ID=Msa0677780-mRNA-1:cds;Parent=Msa0677780-mRNA-1 |
| chr4_4 | CDS | 32384449 | 32384577 | 32384449 | ID=Msa0677780-mRNA-1:cds;Parent=Msa0677780-mRNA-1 |
| chr4_4 | CDS | 32384921 | 32385006 | 32384921 | ID=Msa0677780-mRNA-1:cds;Parent=Msa0677780-mRNA-1 |
| chr4_4 | CDS | 32385208 | 32385331 | 32385208 | ID=Msa0677780-mRNA-1:cds;Parent=Msa0677780-mRNA-1 |
| chr4_4 | CDS | 32385629 | 32385677 | 32385629 | ID=Msa0677780-mRNA-1:cds;Parent=Msa0677780-mRNA-1 |
| chr4_4 | CDS | 32386159 | 32386241 | 32386159 | ID=Msa0677780-mRNA-1:cds;Parent=Msa0677780-mRNA-1 |
| chr4_4 | CDS | 32386408 | 32386475 | 32386408 | ID=Msa0677780-mRNA-1:cds;Parent=Msa0677780-mRNA-1 |
| chr4_4 | CDS | 32387122 | 32387196 | 32387122 | ID=Msa0677780-mRNA-1:cds;Parent=Msa0677780-mRNA-1 |
| chr4_4 | CDS | 32388012 | 32388099 | 32388012 | ID=Msa0677780-mRNA-1:cds;Parent=Msa0677780-mRNA-1 |
| chr4_4 | CDS | 32388396 | 32388512 | 32388396 | ID=Msa0677780-mRNA-1:cds;Parent=Msa0677780-mRNA-1 |
| chr4_4 | CDS | 32388898 | 32389215 | 32388898 | ID=Msa0677780-mRNA-1:cds;Parent=Msa0677780-mRNA-1 |
| chr4_4 | three_prime_UTR | 32389216 | 32389488 | 32389216 | ID=Msa0677780-mRNA-1:three_prime_utr;Parent=Msa0677780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
