Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0598990 | KEH29598.1 | 97.314 | 484 | 13 | 0 | 1 | 484 | 183 | 666 | 0.0 | 988 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0598990 | sp|Q9C5E5|DGK5_ARATH | 75.574 | 479 | 109 | 5 | 4 | 477 | 9 | 484 | 0.0 | 742 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0598990 | A0A072UKH9 | 97.314 | 484 | 13 | 0 | 1 | 484 | 183 | 666 | 0.0 | 988 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0079070 | Msa0598990 | 0.817429 | 3.313199e-52 | -8.615850e-47 |
| Msa0090570 | Msa0598990 | 0.804963 | 1.678561e-49 | -8.615850e-47 |
| Msa0115270 | Msa0598990 | 0.807152 | 5.811765e-50 | -8.615850e-47 |
| Msa0127800 | Msa0598990 | 0.805522 | 1.281682e-49 | -8.615850e-47 |
| Msa0411390 | Msa0598990 | 0.816954 | 4.237464e-52 | -8.615850e-47 |
| Msa0417330 | Msa0598990 | 0.800381 | 1.480350e-48 | -8.615850e-47 |
| Msa0433410 | Msa0598990 | -0.808652 | 2.788186e-50 | -8.615850e-47 |
| Msa0444750 | Msa0598990 | -0.819797 | 9.618532e-53 | -8.615850e-47 |
| Msa0296480 | Msa0598990 | 0.831793 | 1.364693e-55 | -8.615850e-47 |
| Msa0512750 | Msa0598990 | 0.802127 | 6.499896e-49 | -8.615850e-47 |
| Msa0516440 | Msa0598990 | 0.800113 | 1.678272e-48 | -8.615850e-47 |
| Msa0585230 | Msa0598990 | 0.809067 | 2.272079e-50 | -8.615850e-47 |
| Msa0598990 | Msa0672690 | 0.816742 | 4.726110e-52 | -8.615850e-47 |
| Msa0598990 | Msa0677780 | 0.860963 | 1.431095e-63 | -8.615850e-47 |
| Msa0598990 | Msa0688390 | 0.801212 | 1.001577e-48 | -8.615850e-47 |
| Msa0598990 | Msa0703780 | 0.808709 | 2.710336e-50 | -8.615850e-47 |
| Msa0598990 | Msa0722910 | 0.800185 | 1.622840e-48 | -8.615850e-47 |
| Msa0598990 | Msa0723120 | 0.803245 | 3.822012e-49 | -8.615850e-47 |
| Msa0598990 | Msa0824590 | 0.819419 | 1.173307e-52 | -8.615850e-47 |
| Msa0598990 | Msa0844490 | 0.808480 | 3.034341e-50 | -8.615850e-47 |
| Msa0598990 | Msa0864070 | 0.806555 | 7.771819e-50 | -8.615850e-47 |
| Msa0598990 | Msa0865510 | -0.804489 | 2.107705e-49 | -8.615850e-47 |
| Msa0598990 | Msa0888260 | 0.829535 | 4.875641e-55 | -8.615850e-47 |
| Msa0598990 | Msa0899430 | 0.809579 | 1.764830e-50 | -8.615850e-47 |
| Msa0598990 | Msa0927380 | 0.813388 | 2.625529e-51 | -8.615850e-47 |
| Msa0598990 | Msa0931520 | 0.811815 | 5.795316e-51 | -8.615850e-47 |
| Msa0598990 | Msa0935770 | 0.804281 | 2.328694e-49 | -8.615850e-47 |
| Msa0598990 | Msa0958550 | 0.801456 | 8.928255e-49 | -8.615850e-47 |
| Msa0598990 | Msa0969810 | 0.809649 | 1.704292e-50 | -8.615850e-47 |
| Msa0598990 | Msa1083840 | 0.800980 | 1.117043e-48 | -8.615850e-47 |
| Msa0598990 | Msa1121490 | 0.810822 | 9.521965e-51 | -8.615850e-47 |
| Msa0598990 | Msa1305810 | 0.813793 | 2.138398e-51 | -8.615850e-47 |
| Msa0598990 | Msa1458750 | 0.802210 | 6.251031e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0598990 | MtrunA17_Chr4g0022651 | 97.314 | 484 | 13 | 0 | 1 | 484 | 1 | 484 | 0.0 | 983 |
| Msa0598990 | MtrunA17_Chr2g0323521 | 79.876 | 482 | 92 | 3 | 4 | 484 | 7 | 484 | 0.0 | 805 |
| Msa0598990 | MtrunA17_Chr8g0360931 | 69.358 | 483 | 140 | 3 | 6 | 484 | 10 | 488 | 0.0 | 678 |
| Msa0598990 | MtrunA17_Chr4g0072941 | 34.430 | 395 | 241 | 7 | 32 | 416 | 81 | 467 | 1.41e-74 | 243 |
| Msa0598990 | MtrunA17_Chr2g0305591 | 34.913 | 401 | 243 | 8 | 26 | 416 | 83 | 475 | 3.73e-74 | 242 |
| Msa0598990 | MtrunA17_Chr8g0384961 | 28.643 | 398 | 208 | 13 | 36 | 428 | 333 | 659 | 2.31e-36 | 142 |
| Msa0598990 | MtrunA17_Chr4g0061331 | 27.020 | 396 | 214 | 11 | 36 | 428 | 359 | 682 | 5.20e-33 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0598990 | AT2G20900.3 | 75.926 | 486 | 109 | 5 | 4 | 484 | 9 | 491 | 0.0 | 754 |
| Msa0598990 | AT2G20900.2 | 75.926 | 486 | 109 | 5 | 4 | 484 | 9 | 491 | 0.0 | 754 |
| Msa0598990 | AT2G20900.4 | 75.574 | 479 | 109 | 5 | 4 | 477 | 9 | 484 | 0.0 | 742 |
| Msa0598990 | AT2G20900.1 | 75.574 | 479 | 109 | 5 | 4 | 477 | 9 | 484 | 0.0 | 742 |
| Msa0598990 | AT4G28130.1 | 69.401 | 451 | 129 | 5 | 4 | 453 | 16 | 458 | 0.0 | 643 |
| Msa0598990 | AT5G57690.1 | 36.500 | 400 | 236 | 6 | 27 | 416 | 81 | 472 | 3.90e-83 | 265 |
| Msa0598990 | AT4G30340.1 | 34.699 | 415 | 258 | 5 | 7 | 416 | 71 | 477 | 5.34e-82 | 263 |
| Msa0598990 | AT2G18730.1 | 35.238 | 420 | 240 | 8 | 11 | 416 | 72 | 473 | 5.38e-80 | 257 |
| Msa0598990 | AT4G30340.2 | 32.792 | 308 | 194 | 5 | 7 | 309 | 71 | 370 | 7.07e-52 | 180 |
| Msa0598990 | AT5G63770.1 | 31.738 | 397 | 196 | 14 | 36 | 428 | 342 | 667 | 8.67e-40 | 153 |
| Msa0598990 | AT5G63770.2 | 31.738 | 397 | 196 | 14 | 36 | 428 | 342 | 667 | 8.67e-40 | 153 |
| Msa0598990 | AT5G07920.3 | 26.076 | 395 | 218 | 10 | 36 | 428 | 361 | 683 | 2.11e-33 | 134 |
| Msa0598990 | AT5G07920.1 | 26.076 | 395 | 218 | 10 | 36 | 428 | 361 | 683 | 2.11e-33 | 134 |
| Msa0598990 | AT5G07920.2 | 26.020 | 392 | 216 | 10 | 36 | 425 | 361 | 680 | 4.00e-33 | 133 |
Find 149 sgRNAs with CRISPR-Local
Find 427 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACCTTTCGTGGCGGATTT+TGG | 0.158709 | 4_2:-36812096 | Msa0598990:CDS |
| TCAAAGCAACTACAAATATT+AGG | 0.188908 | 4_2:+36808484 | None:intergenic |
| TAAATTTCAGGTCTTTGATT+TGG | 0.250686 | 4_2:-36813541 | Msa0598990:intron |
| AAATTTCAGGTCTTTGATTT+GGG | 0.258634 | 4_2:-36813540 | Msa0598990:intron |
| CTGAAGCGGATGAACTTAAT+AGG | 0.269631 | 4_2:-36812425 | Msa0598990:CDS |
| ATCACGTTGCTTCTTCCTGC+TGG | 0.273418 | 4_2:+36809658 | None:intergenic |
| GAGAACGGTCTATGCTAATT+TGG | 0.280198 | 4_2:-36813493 | Msa0598990:CDS |
| GGATCACAGGAACCTTCTTT+TGG | 0.281891 | 4_2:+36812498 | None:intergenic |
| AGACGAGTTCCATGTCCTTT+TGG | 0.283514 | 4_2:+36809252 | None:intergenic |
| CTTGAACAACTTTAAGATTC+CGG | 0.292268 | 4_2:-36814384 | Msa0598990:CDS |
| CGACCCTGGTACTATGATTC+AGG | 0.300357 | 4_2:-36808342 | Msa0598990:three_prime_UTR |
| TCTTCTGTAGCATTGGGATT+CGG | 0.302722 | 4_2:+36814873 | None:intergenic |
| CTTCTGTAGCATTGGGATTC+GGG | 0.326773 | 4_2:+36814874 | None:intergenic |
| AAATAAATGCTTTAGGTTGC+AGG | 0.328868 | 4_2:-36813301 | Msa0598990:intron |
| TTCAATCTCATTCCATCTTC+AGG | 0.331631 | 4_2:-36814743 | Msa0598990:intron |
| TGAGAAATATCAACATCATC+TGG | 0.334091 | 4_2:+36808552 | None:intergenic |
| ACTGCAAGAATTGAGCAAAT+TGG | 0.340464 | 4_2:+36808444 | None:intergenic |
| GTTTAAAGCATCCTTCTTCC+AGG | 0.351643 | 4_2:-36811283 | Msa0598990:intron |
| TTTACCTGGGAGGTATGTTT+AGG | 0.362062 | 4_2:+36810558 | None:intergenic |
| TGCATACCTGATTCACCAAT+TGG | 0.371690 | 4_2:+36811511 | None:intergenic |
| ATTATCTCAACCTTGGATTC+CGG | 0.372530 | 4_2:+36814347 | None:intergenic |
| CAAAGCAACTACAAATATTA+GGG | 0.378865 | 4_2:+36808485 | None:intergenic |
| GGCAACTCAAGTGGCGCAAT+TGG | 0.384335 | 4_2:+36812477 | None:intergenic |
| ACCGTTCTCAGCGCCTTATC+AGG | 0.391827 | 4_2:+36813507 | None:intergenic |
| GCAGAGGAATATCGGAAGTT+TGG | 0.394586 | 4_2:-36808597 | Msa0598990:CDS |
| CACCTTTGCAAAACTCAAAC+CGG | 0.396365 | 4_2:+36808826 | None:intergenic |
| TTCTGGTGGATTTAATCCAT+GGG | 0.401527 | 4_2:-36809687 | Msa0598990:CDS |
| TTTGGAAAGCCTCAAGAAAC+GGG | 0.403282 | 4_2:-36813475 | Msa0598990:CDS |
| TATGACTGTAAAATTTGTAT+AGG | 0.406471 | 4_2:-36808419 | Msa0598990:three_prime_UTR |
| CATACATTCATGAGGATTGA+TGG | 0.410823 | 4_2:-36808795 | Msa0598990:CDS |
| GGCAATAGCTACTGTTCCCT+TGG | 0.414366 | 4_2:-36813215 | Msa0598990:CDS |
| TCCAAGCTGACCACCACTCT+TGG | 0.414812 | 4_2:+36814271 | None:intergenic |
| TTTGTTGATTAATTAATCAA+TGG | 0.415605 | 4_2:+36814809 | None:intergenic |
| ACACTGGAGCAGAGGAATAT+CGG | 0.423929 | 4_2:-36808605 | Msa0598990:CDS |
| TGTACCTAAGTGTCCTGTCT+TGG | 0.428410 | 4_2:-36814306 | Msa0598990:CDS |
| TTTCTGGTGGATTTAATCCA+TGG | 0.429448 | 4_2:-36809688 | Msa0598990:CDS |
| GAGGTATCTTCTGTAGCATT+GGG | 0.430484 | 4_2:+36814867 | None:intergenic |
| CGAGGTATCTTCTGTAGCAT+TGG | 0.438041 | 4_2:+36814866 | None:intergenic |
| GAAGGTTGCCACACCTTTCG+TGG | 0.440633 | 4_2:-36812106 | Msa0598990:CDS |
| TTCCTGCTGGGTGTACCCCA+TGG | 0.441224 | 4_2:+36809671 | None:intergenic |
| TCCAAGAGTGGTGGTCAGCT+TGG | 0.448311 | 4_2:-36814272 | Msa0598990:CDS |
| AGAGATTTCTCACCTTGGTC+AGG | 0.449064 | 4_2:-36808724 | Msa0598990:CDS |
| GGAACAGCAGGCTGGCTACT+TGG | 0.455383 | 4_2:-36813271 | Msa0598990:CDS |
| TGTCATCTTCTTCATTGTCA+TGG | 0.455405 | 4_2:+36808640 | None:intergenic |
| TTCATTAGGCACATAGAATC+CGG | 0.458068 | 4_2:-36808845 | Msa0598990:intron |
| TCAGCTGGCATATTCTTATG+AGG | 0.460496 | 4_2:-36812530 | Msa0598990:intron |
| TGAAGCGGATGAACTTAATA+GGG | 0.466957 | 4_2:-36812424 | Msa0598990:intron |
| TTCCTCAATTATCTCAACCT+TGG | 0.467566 | 4_2:+36814340 | None:intergenic |
| TAGAGTACGTATGCTAAGCT+TGG | 0.469811 | 4_2:-36811332 | Msa0598990:CDS |
| CTGGTACTATGATTCAGGTT+TGG | 0.471016 | 4_2:-36808337 | Msa0598990:three_prime_UTR |
| GATTAATTAATCAATGGAAA+GGG | 0.478713 | 4_2:+36814815 | None:intergenic |
| AAGGGAACAGTAGCTATTGC+CGG | 0.478944 | 4_2:+36813217 | None:intergenic |
| GCTACTGTTCCCTTGGGCAC+AGG | 0.480107 | 4_2:-36813208 | Msa0598990:CDS |
| ATTTGGAAAGCCTCAAGAAA+CGG | 0.482120 | 4_2:-36813476 | Msa0598990:CDS |
| TCACGTTGCTTCTTCCTGCT+GGG | 0.483020 | 4_2:+36809659 | None:intergenic |
| TCCGGATTACATTCTTGTAC+CGG | 0.485125 | 4_2:-36814366 | Msa0598990:CDS |
| TTGCAGGGGAAGAAGAATCC+AGG | 0.486197 | 4_2:-36812816 | Msa0598990:intron |
| GTGTACGGTATGTTTGTAAG+AGG | 0.489172 | 4_2:+36814243 | None:intergenic |
| AGAGTGGTGGTCAGCTTGGA+GGG | 0.494247 | 4_2:-36814268 | Msa0598990:CDS |
| ATCCATGGGGTACACCCAGC+AGG | 0.494352 | 4_2:-36809673 | Msa0598990:CDS |
| GGGGCGACGGAACAGCAGGC+TGG | 0.494717 | 4_2:-36813279 | Msa0598990:CDS |
| CAAACCTGAATCATAGTACC+AGG | 0.501436 | 4_2:+36808338 | None:intergenic |
| AAGAGTGGTGGTCAGCTTGG+AGG | 0.505171 | 4_2:-36814269 | Msa0598990:CDS |
| TGATTAATTAATCAATGGAA+AGG | 0.505444 | 4_2:+36814814 | None:intergenic |
| AGAAGGCCATCATCCACATA+TGG | 0.505822 | 4_2:+36809324 | None:intergenic |
| ACATGGAACTCGTCTTGCTC+AGG | 0.506463 | 4_2:-36809244 | Msa0598990:intron |
| TTTAGGTCTTGCCATTGACC+AGG | 0.510091 | 4_2:+36810575 | None:intergenic |
| GCTGGAAGATGTTGTTTCCA+AGG | 0.512593 | 4_2:+36808768 | None:intergenic |
| GGAAGAAGGATGCTTTAAAC+CGG | 0.518327 | 4_2:+36811286 | None:intergenic |
| AATAAATGCTTTAGGTTGCA+GGG | 0.519840 | 4_2:-36813300 | Msa0598990:intron |
| TAAAACCAACGATTTCAAGA+AGG | 0.521347 | 4_2:+36809307 | None:intergenic |
| CATTCTTGTACCGGAATCCA+AGG | 0.521654 | 4_2:-36814357 | Msa0598990:CDS |
| TCCGGTACAAGAATGTAATC+CGG | 0.527063 | 4_2:+36814365 | None:intergenic |
| AGATTTGACACCGCCATATG+TGG | 0.527724 | 4_2:-36809337 | Msa0598990:CDS |
| ATCTAAGCAAGGATAGTTGA+GGG | 0.534455 | 4_2:+36808380 | None:intergenic |
| AGCTTGGATGCACGCAAGGA+TGG | 0.538505 | 4_2:-36811316 | Msa0598990:CDS |
| GCAATAGCTACTGTTCCCTT+GGG | 0.539575 | 4_2:-36813214 | Msa0598990:CDS |
| CCTACCCAACCAAATGCAAA+AGG | 0.541227 | 4_2:+36813175 | None:intergenic |
| CTACTGTTCCCTTGGGCACA+GGG | 0.542272 | 4_2:-36813207 | Msa0598990:CDS |
| TAGTGAACTGACCTGGAAGA+AGG | 0.542887 | 4_2:+36811272 | None:intergenic |
| TAGATTGTTCCCTGTGCCCA+AGG | 0.543554 | 4_2:+36813198 | None:intergenic |
| GATGGCCTTCTTGAAATCGT+TGG | 0.545056 | 4_2:-36809312 | Msa0598990:CDS |
| TTGTCATGGTGTGGTGATGA+AGG | 0.545123 | 4_2:+36808654 | None:intergenic |
| ATAAATGCTTTAGGTTGCAG+GGG | 0.546761 | 4_2:-36813299 | Msa0598990:intron |
| TTGCTTGCTCCAAAAGGACA+TGG | 0.547794 | 4_2:-36809261 | Msa0598990:CDS |
| AAAACCAAGACAGGACACTT+AGG | 0.552121 | 4_2:+36814302 | None:intergenic |
| ACTGAGCGTTGATCTGTCCC+TGG | 0.553366 | 4_2:+36812798 | None:intergenic |
| TCTCAAATTATCTCATCCTC+CGG | 0.554396 | 4_2:-36813236 | Msa0598990:CDS |
| TGAGGATTGATGGAGAACCT+TGG | 0.555058 | 4_2:-36808785 | Msa0598990:CDS |
| TGAATTTGCTATGAAGATCA+TGG | 0.555936 | 4_2:-36813448 | Msa0598990:CDS |
| GCTAAGCTTGGATGCACGCA+AGG | 0.557931 | 4_2:-36811320 | Msa0598990:CDS |
| CGCTTCAGATACACGATGGA+AGG | 0.559446 | 4_2:+36812440 | None:intergenic |
| TTTAGACTTGCATATATGAG+TGG | 0.564148 | 4_2:+36808689 | None:intergenic |
| AGGATGAGAGCTCCAAAAGA+AGG | 0.565443 | 4_2:-36812510 | Msa0598990:CDS |
| GAGAAATATCAACATCATCT+GGG | 0.569057 | 4_2:+36808553 | None:intergenic |
| AAGTGGCGCAATTGGATCAC+AGG | 0.569089 | 4_2:+36812485 | None:intergenic |
| ATTCATCACCCCGTTTCTTG+AGG | 0.570503 | 4_2:+36813466 | None:intergenic |
| AAAAGTTCAGTTCATGTGGA+AGG | 0.572277 | 4_2:+36814838 | None:intergenic |
| GATTCTTTAATGCAGGAACA+TGG | 0.574303 | 4_2:-36810630 | Msa0598990:intron |
| TCCTGATAAGGCGCTGAGAA+CGG | 0.578458 | 4_2:-36813508 | Msa0598990:CDS |
| AGATCAAGTAATGAAGGCAA+AGG | 0.578487 | 4_2:-36812763 | Msa0598990:CDS |
| TATGTGTGTGTACCTGAAGA+TGG | 0.580873 | 4_2:+36814731 | None:intergenic |
| ATTCCAAAATCCGCCACGAA+AGG | 0.583409 | 4_2:+36812093 | None:intergenic |
| TTAAATCCACCAGAAAAGCT+TGG | 0.585369 | 4_2:+36809695 | None:intergenic |
| ATTTCAGGTCTTTGATTTGG+GGG | 0.588129 | 4_2:-36813538 | Msa0598990:intron |
| AGGGAAAAGTTCAGTTCATG+TGG | 0.590321 | 4_2:+36814834 | None:intergenic |
| TCTTCTTCATTGTCATGGTG+TGG | 0.591432 | 4_2:+36808645 | None:intergenic |
| AAAGAATGTGGCAACTCAAG+TGG | 0.592531 | 4_2:+36812468 | None:intergenic |
| CTTCCATCGTGTATCTGAAG+CGG | 0.594696 | 4_2:-36812439 | Msa0598990:CDS |
| TCTAAGCAAGGATAGTTGAG+GGG | 0.599437 | 4_2:+36808381 | None:intergenic |
| TTTGTTAACTCCAAGAGTGG+TGG | 0.600344 | 4_2:-36814281 | Msa0598990:CDS |
| AATCTAAGCAAGGATAGTTG+AGG | 0.601025 | 4_2:+36808379 | None:intergenic |
| ACACCGCCATATGTGGATGA+TGG | 0.602505 | 4_2:-36809330 | Msa0598990:CDS |
| ACGACGGTATCATCATCAGC+TGG | 0.609606 | 4_2:+36808750 | None:intergenic |
| ATCCAAGGTTGAGATAATTG+AGG | 0.612632 | 4_2:-36814342 | Msa0598990:CDS |
| AATGGACACACAAGCTCGAG+AGG | 0.616092 | 4_2:+36808311 | None:intergenic |
| TCTGGTGGATTTAATCCATG+GGG | 0.616150 | 4_2:-36809686 | Msa0598990:CDS |
| CTAAGCAAGGATAGTTGAGG+GGG | 0.617195 | 4_2:+36808382 | None:intergenic |
| TGTGCAGCTGCATGCAACAA+TGG | 0.622262 | 4_2:-36814417 | Msa0598990:intron |
| TGAAGAAGACACTGGAGCAG+AGG | 0.623546 | 4_2:-36808613 | Msa0598990:CDS |
| ATATCGGAAGTTTGGTGCAG+CGG | 0.623694 | 4_2:-36808589 | Msa0598990:CDS |
| GACAGATCAACGCTCAGTTG+TGG | 0.627231 | 4_2:-36812793 | Msa0598990:CDS |
| TGCAGGGGAAGAAGAATCCA+GGG | 0.627615 | 4_2:-36812815 | Msa0598990:intron |
| AATTTCAGGTCTTTGATTTG+GGG | 0.631109 | 4_2:-36813539 | Msa0598990:intron |
| GTTGAGATAATTGAGGAATG+TGG | 0.631386 | 4_2:-36814335 | Msa0598990:CDS |
| TGGAAGGCATGCAAAGAATG+TGG | 0.632402 | 4_2:+36812456 | None:intergenic |
| AAAATCCGCCACGAAAGGTG+TGG | 0.632993 | 4_2:+36812098 | None:intergenic |
| AGATTGTTCCCTGTGCCCAA+GGG | 0.634642 | 4_2:+36813199 | None:intergenic |
| AGTTACTTGAAATCTAAGCA+AGG | 0.636240 | 4_2:+36808369 | None:intergenic |
| AAGACCTAAACATACCTCCC+AGG | 0.644748 | 4_2:-36810562 | Msa0598990:intron |
| GTGGTAGAGATTTCTCACCT+TGG | 0.647555 | 4_2:-36808729 | Msa0598990:CDS |
| TCAAGTAACTCTAACGACCC+TGG | 0.650935 | 4_2:-36808356 | Msa0598990:three_prime_UTR |
| GACAGTGATGAAGAAGACAC+TGG | 0.653949 | 4_2:-36808621 | Msa0598990:CDS |
| TTGCTATGAAGATCATGGAG+AGG | 0.656396 | 4_2:-36813443 | Msa0598990:CDS |
| TATGAAATGGTTTACCTGGG+AGG | 0.657910 | 4_2:+36810548 | None:intergenic |
| GAGTGGTGGTCAGCTTGGAG+GGG | 0.660306 | 4_2:-36814267 | Msa0598990:CDS |
| GAGCAGATCATACATTCATG+AGG | 0.663497 | 4_2:-36808803 | Msa0598990:CDS |
| TAAATGCTTTAGGTTGCAGG+GGG | 0.665293 | 4_2:-36813298 | Msa0598990:intron |
| GGTTGCCACACCTTTCGTGG+CGG | 0.668255 | 4_2:-36812103 | Msa0598990:CDS |
| AGGCCATCATCCACATATGG+CGG | 0.671790 | 4_2:+36809327 | None:intergenic |
| ATTGGGATTCGGGATCTGAG+TGG | 0.682656 | 4_2:+36814884 | None:intergenic |
| AGCTGATGATGATACCGTCG+TGG | 0.687523 | 4_2:-36808748 | Msa0598990:CDS |
| CATCCGCTTCAGATACACGA+TGG | 0.710096 | 4_2:+36812436 | None:intergenic |
| CAAGCATGTTAACCTGACCA+AGG | 0.711731 | 4_2:+36808712 | None:intergenic |
| TTGGAAAGCCTCAAGAAACG+GGG | 0.720018 | 4_2:-36813474 | Msa0598990:CDS |
| AAACCTGAATCATAGTACCA+GGG | 0.720172 | 4_2:+36808339 | None:intergenic |
| GGAACAGTAGCTATTGCCGG+AGG | 0.720337 | 4_2:+36813220 | None:intergenic |
| GTGAGAAATCTCTACCACGA+CGG | 0.731993 | 4_2:+36808734 | None:intergenic |
| TTCATGTGGAAGGAATTACG+AGG | 0.816796 | 4_2:+36814848 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTCAAATATAAAAATAAATA+AGG | + | chr4_2:36810893-36810912 | None:intergenic | 10.0% |
| !! | ATTTCAAAATTCAATTTAAT+AGG | + | chr4_2:36811397-36811416 | None:intergenic | 10.0% |
| !! | TAAAACATTAAAAAATATAC+AGG | - | chr4_2:36812643-36812662 | Msa0598990:intron | 10.0% |
| !! | AAAGAAAAAAACAATTATTT+AGG | + | chr4_2:36812827-36812846 | None:intergenic | 10.0% |
| !! | TATGTTAATTTATTTAAAGA+CGG | + | chr4_2:36813165-36813184 | None:intergenic | 10.0% |
| !!! | TTTGTTGATTAATTAATCAA+TGG | + | chr4_2:36808344-36808363 | None:intergenic | 15.0% |
| !!! | TTTTTATATGTATATAGTTC+CGG | - | chr4_2:36808950-36808969 | Msa0598990:intron | 15.0% |
| !! | TACAATTTCAAAGATTAAAA+TGG | - | chr4_2:36809540-36809559 | Msa0598990:intron | 15.0% |
| !! | AATAAAATTATCCTAGTTAT+AGG | + | chr4_2:36810457-36810476 | None:intergenic | 15.0% |
| !! | TTATCAAAATTAAGACATAT+AGG | + | chr4_2:36810489-36810508 | None:intergenic | 15.0% |
| !!! | AAATGTTTGATATTTGTTTT+TGG | - | chr4_2:36810584-36810603 | Msa0598990:CDS | 15.0% |
| !!! | TATTTTTATATTTGAGTTTG+TGG | - | chr4_2:36810897-36810916 | Msa0598990:intron | 15.0% |
| !! | AATTAAAATAAAACAAACCT+AGG | + | chr4_2:36810956-36810975 | None:intergenic | 15.0% |
| !! | TAATGAAAAACACATTTATA+TGG | + | chr4_2:36811159-36811178 | None:intergenic | 15.0% |
| !!! | TATAAATGTGTTTTTCATTA+TGG | - | chr4_2:36811159-36811178 | Msa0598990:intron | 15.0% |
| !! | AAAATAATCAAGCAAAATAA+GGG | + | chr4_2:36811448-36811467 | None:intergenic | 15.0% |
| !! | AAAAATAATCAAGCAAAATA+AGG | + | chr4_2:36811449-36811468 | None:intergenic | 15.0% |
| !! | TTTAGATCTTAGATTATATT+AGG | - | chr4_2:36811486-36811505 | Msa0598990:intron | 15.0% |
| !! | TTAGATCTTAGATTATATTA+GGG | - | chr4_2:36811487-36811506 | Msa0598990:intron | 15.0% |
| !!! | TTTTATTTTTAACAATTAGG+TGG | + | chr4_2:36811530-36811549 | None:intergenic | 15.0% |
| !! | CATTTACATCATAAAATTTA+AGG | + | chr4_2:36811970-36811989 | None:intergenic | 15.0% |
| !!! | TAATGATTTTCTTGTATATT+TGG | - | chr4_2:36812460-36812479 | Msa0598990:CDS | 15.0% |
| !! | AAAAAGTTATATTACAAGAT+AGG | + | chr4_2:36813086-36813105 | None:intergenic | 15.0% |
| !! | ATAAATTAACATATATGTAG+CGG | - | chr4_2:36813172-36813191 | Msa0598990:intron | 15.0% |
| !! | GATTAATTAATCAATGGAAA+GGG | + | chr4_2:36808338-36808357 | None:intergenic | 20.0% |
| !! | TGATTAATTAATCAATGGAA+AGG | + | chr4_2:36808339-36808358 | None:intergenic | 20.0% |
| !!! | AGAGAAAGTTGATTTTAATT+TGG | + | chr4_2:36808385-36808404 | None:intergenic | 20.0% |
| !! | AAATGTTATGAAACTAAACA+TGG | + | chr4_2:36808470-36808489 | None:intergenic | 20.0% |
| !! | ATATAAGAGAATTTGCAAAA+TGG | + | chr4_2:36808503-36808522 | None:intergenic | 20.0% |
| !! | AAAATCTAATCTGAACAATT+TGG | - | chr4_2:36808691-36808710 | Msa0598990:CDS | 20.0% |
| !!! | TAAATTTGTTATATCGAAAC+CGG | + | chr4_2:36808972-36808991 | None:intergenic | 20.0% |
| !! | AAAGATAAAGTAAAGTCAAT+CGG | - | chr4_2:36809040-36809059 | Msa0598990:intron | 20.0% |
| !!! | TGTTTTAATATAAGTTGTCA+TGG | - | chr4_2:36809161-36809180 | Msa0598990:intron | 20.0% |
| !!! | TTGTGATACAAAATTTTGAT+GGG | - | chr4_2:36809747-36809766 | Msa0598990:intron | 20.0% |
| !!! | TAGTTTGAAATAAATGCTTT+AGG | - | chr4_2:36809842-36809861 | Msa0598990:intron | 20.0% |
| !! | CTTTATATATACAGAAAAAG+TGG | + | chr4_2:36810217-36810236 | None:intergenic | 20.0% |
| !! | TAGTTATAGGATTAAAGAAT+AGG | + | chr4_2:36810444-36810463 | None:intergenic | 20.0% |
| !! | TATTCTTTAATCCTATAACT+AGG | - | chr4_2:36810443-36810462 | Msa0598990:intron | 20.0% |
| !!! | TATGTCTTAATTTTGATAAC+TGG | - | chr4_2:36810490-36810509 | Msa0598990:intron | 20.0% |
| !! | TAGATCTTAGATTATATTAG+GGG | - | chr4_2:36811488-36811507 | Msa0598990:intron | 20.0% |
| !!! | AATTGGTTTTTGAATTTTTC+AGG | + | chr4_2:36811625-36811644 | None:intergenic | 20.0% |
| !! | TGAAAAATTCAAAAACCAAT+TGG | - | chr4_2:36811624-36811643 | Msa0598990:intron | 20.0% |
| !! | CTAAAATGTCAATTGAAATT+AGG | + | chr4_2:36811801-36811820 | None:intergenic | 20.0% |
| !! | TTACATCATAAAATTTAAGG+CGG | + | chr4_2:36811967-36811986 | None:intergenic | 20.0% |
| !! | TAAAATTGCTTGCATTATTA+TGG | - | chr4_2:36812123-36812142 | Msa0598990:intron | 20.0% |
| !! | AAAATTGCTTGCATTATTAT+GGG | - | chr4_2:36812124-36812143 | Msa0598990:intron | 20.0% |
| !!! | ATTTAAGAACATGAAACTTT+TGG | + | chr4_2:36812238-36812257 | None:intergenic | 20.0% |
| !! | AAAGTTTCATGTTCTTAAAT+TGG | - | chr4_2:36812238-36812257 | Msa0598990:intron | 20.0% |
| !! | AAGTTTCATGTTCTTAAATT+GGG | - | chr4_2:36812239-36812258 | Msa0598990:intron | 20.0% |
| !! | ATAATTTGATTCTTTAATGC+AGG | - | chr4_2:36812513-36812532 | Msa0598990:CDS | 20.0% |
| !! | GATATAGATAGTATATGAAA+TGG | + | chr4_2:36812618-36812637 | None:intergenic | 20.0% |
| !! | TTAAAAAATATACAGGTTAG+TGG | - | chr4_2:36812650-36812669 | Msa0598990:intron | 20.0% |
| !! | ATATGTAACTCTTGTATTTA+TGG | + | chr4_2:36812964-36812983 | None:intergenic | 20.0% |
| !! | GATGGTATATGAATAAATAA+AGG | - | chr4_2:36813053-36813072 | Msa0598990:intron | 20.0% |
| !!! | TTTGACTTTGTCTTTTAAAA+GGG | + | chr4_2:36814009-36814028 | None:intergenic | 20.0% |
| !!! | TTTTGACTTTGTCTTTTAAA+AGG | + | chr4_2:36814010-36814029 | None:intergenic | 20.0% |
| !! | ATGACATGAAAATAAAACTA+TGG | - | chr4_2:36814257-36814276 | Msa0598990:CDS | 20.0% |
| !! | TATGACTGTAAAATTTGTAT+AGG | - | chr4_2:36814731-36814750 | Msa0598990:intron | 20.0% |
| ! | TAAACATGGTTGATTAATGA+TGG | + | chr4_2:36808456-36808475 | None:intergenic | 25.0% |
| !!! | TATTTTTATGAGCATGTACT+CGG | - | chr4_2:36808520-36808539 | Msa0598990:three_prime_UTR | 25.0% |
| !!! | GTTTTTCATTAAGAAGTGTA+CGG | + | chr4_2:36808925-36808944 | None:intergenic | 25.0% |
| ! | TACACTTCTTAATGAAAAAC+AGG | - | chr4_2:36808925-36808944 | Msa0598990:intron | 25.0% |
| ! | ACTCATAAAAATGAAGATTG+CGG | + | chr4_2:36809316-36809335 | None:intergenic | 25.0% |
| ! | TTGTATGAGTTTGGTAAATT+TGG | - | chr4_2:36809367-36809386 | Msa0598990:intron | 25.0% |
| ! | ATCGATCATTAACTTCTTTA+CGG | + | chr4_2:36809458-36809477 | None:intergenic | 25.0% |
| ! | ATTTATGCAAATTTCGTAAG+TGG | - | chr4_2:36809569-36809588 | Msa0598990:intron | 25.0% |
| ! | TTTATGCAAATTTCGTAAGT+GGG | - | chr4_2:36809570-36809589 | Msa0598990:intron | 25.0% |
| !! | TAAATTTCAGGTCTTTGATT+TGG | - | chr4_2:36809609-36809628 | Msa0598990:intron | 25.0% |
| !! | AAATTTCAGGTCTTTGATTT+GGG | - | chr4_2:36809610-36809629 | Msa0598990:intron | 25.0% |
| !! | GTTGTGATACAAAATTTTGA+TGG | - | chr4_2:36809746-36809765 | Msa0598990:intron | 25.0% |
| !! | CAAACAAAGCAAATTTTTGT+TGG | - | chr4_2:36809790-36809809 | Msa0598990:intron | 25.0% |
| !! | AAAGCAAATTTTTGTTGGTA+AGG | - | chr4_2:36809795-36809814 | Msa0598990:intron | 25.0% |
| ! | ATCTCTATTAAAACAAGAAG+GGG | + | chr4_2:36810120-36810139 | None:intergenic | 25.0% |
| ! | CATCTCTATTAAAACAAGAA+GGG | + | chr4_2:36810121-36810140 | None:intergenic | 25.0% |
| ! | ATATATACAGAAAAAGTGGT+TGG | + | chr4_2:36810213-36810232 | None:intergenic | 25.0% |
| ! | TCTGTATATATAAAGATGTG+TGG | - | chr4_2:36810222-36810241 | Msa0598990:intron | 25.0% |
| !!! | AAATTTGTTCCTGAAGTTTT+TGG | - | chr4_2:36810260-36810279 | Msa0598990:intron | 25.0% |
| !!! | GTTTTTAGATCAAGTAATGA+AGG | - | chr4_2:36810381-36810400 | Msa0598990:intron | 25.0% |
| ! | AAAACAGATATTGACAAATC+TGG | + | chr4_2:36810787-36810806 | None:intergenic | 25.0% |
| ! | TTTGTGGATATTAAAACTGA+GGG | - | chr4_2:36810913-36810932 | Msa0598990:intron | 25.0% |
| !! | AAAGAGAAAGTAAGTTGAAT+AGG | + | chr4_2:36811005-36811024 | None:intergenic | 25.0% |
| ! | TATCAGTTATTGCTTATGAT+AGG | - | chr4_2:36811550-36811569 | Msa0598990:CDS | 25.0% |
| ! | AAATTAACAACGTGTCTATA+CGG | + | chr4_2:36812043-36812062 | None:intergenic | 25.0% |
| !! | AATAATGCAAGCAATTTTAG+AGG | + | chr4_2:36812122-36812141 | None:intergenic | 25.0% |
| ! | ACTGTATTACCAAATAAACT+TGG | + | chr4_2:36812403-36812422 | None:intergenic | 25.0% |
| !! | AAAACAATTATTTAGGACAC+CGG | + | chr4_2:36812820-36812839 | None:intergenic | 25.0% |
| ! | TTGAGAAATGTTGATCAATT+AGG | - | chr4_2:36812987-36813006 | Msa0598990:intron | 25.0% |
| ! | TGAGAAATGTTGATCAATTA+GGG | - | chr4_2:36812988-36813007 | Msa0598990:intron | 25.0% |
| !!! | TCCTATATTTTTTACACTAG+CGG | - | chr4_2:36813203-36813222 | Msa0598990:CDS | 25.0% |
| ! | ATGCTGTACATAAAATACAA+TGG | + | chr4_2:36813410-36813429 | None:intergenic | 25.0% |
| ! | AGTAAATGTCTAATACTGTT+AGG | - | chr4_2:36813724-36813743 | Msa0598990:intron | 25.0% |
| !!! | TCCTGTTATTATTAGTTTTG+AGG | - | chr4_2:36813764-36813783 | Msa0598990:intron | 25.0% |
| ! | ACCTCAAAACTAATAATAAC+AGG | + | chr4_2:36813768-36813787 | None:intergenic | 25.0% |
| ! | ATATGATGCAATGAAACATA+GGG | - | chr4_2:36813937-36813956 | Msa0598990:intron | 25.0% |
| !!! | TTGTCTTTTAAAAGGGAAAT+AGG | + | chr4_2:36814002-36814021 | None:intergenic | 25.0% |
| ! | TATCTCGATTCAAACAAAAT+TGG | - | chr4_2:36814075-36814094 | Msa0598990:intron | 25.0% |
| !! | ATGCAAATCACTATCTATTT+TGG | - | chr4_2:36814106-36814125 | Msa0598990:intron | 25.0% |
| ! | TCATGTCATAAATCAAAAGA+AGG | + | chr4_2:36814246-36814265 | None:intergenic | 25.0% |
| ! | CAAAGCAACTACAAATATTA+GGG | + | chr4_2:36814668-36814687 | None:intergenic | 25.0% |
| ! | TCAAAGCAACTACAAATATT+AGG | + | chr4_2:36814669-36814688 | None:intergenic | 25.0% |
| !! | CTTGAACAACTTTAAGATTC+CGG | - | chr4_2:36808766-36808785 | Msa0598990:CDS | 30.0% |
| CTTATTTGCATAAGTTCATC+AGG | + | chr4_2:36809102-36809121 | None:intergenic | 30.0% | |
| TCCATGAAATTGTATGAGTT+TGG | - | chr4_2:36809358-36809377 | Msa0598990:intron | 30.0% | |
| ACCAAACTCATACAATTTCA+TGG | + | chr4_2:36809362-36809381 | None:intergenic | 30.0% | |
| TCGATCATTAACTTCTTTAC+GGG | + | chr4_2:36809457-36809476 | None:intergenic | 30.0% | |
| !! | AATTTCAGGTCTTTGATTTG+GGG | - | chr4_2:36809611-36809630 | Msa0598990:intron | 30.0% |
| !! | TGAATTTGCTATGAAGATCA+TGG | - | chr4_2:36809702-36809721 | Msa0598990:CDS | 30.0% |
| !! | GCTTTGTTTGCTTACAAAAA+TGG | + | chr4_2:36809780-36809799 | None:intergenic | 30.0% |
| !! | AAATAAATGCTTTAGGTTGC+AGG | - | chr4_2:36809849-36809868 | Msa0598990:intron | 30.0% |
| !! | AATAAATGCTTTAGGTTGCA+GGG | - | chr4_2:36809850-36809869 | Msa0598990:intron | 30.0% |
| ! | AACAATCTACCTTTTGCATT+TGG | - | chr4_2:36809966-36809985 | Msa0598990:intron | 30.0% |
| !!! | TAGGAAACTGCAGTTTTATT+TGG | - | chr4_2:36809994-36810013 | Msa0598990:intron | 30.0% |
| ATCTCATATTATCAAGACAG+TGG | + | chr4_2:36810051-36810070 | None:intergenic | 30.0% | |
| ! | TCACATGAAGAGCTTTTATT+AGG | - | chr4_2:36810087-36810106 | Msa0598990:intron | 30.0% |
| CCATCTCTATTAAAACAAGA+AGG | + | chr4_2:36810122-36810141 | None:intergenic | 30.0% | |
| !!! | CCTTCTTGTTTTAATAGAGA+TGG | - | chr4_2:36810119-36810138 | Msa0598990:intron | 30.0% |
| AGAGATGGAGCATATTATTA+TGG | - | chr4_2:36810134-36810153 | Msa0598990:intron | 30.0% | |
| TTGCATGTTTACCATTTACT+AGG | - | chr4_2:36810177-36810196 | Msa0598990:intron | 30.0% | |
| ! | GAAATTTGAGACCTAGTAAA+TGG | + | chr4_2:36810191-36810210 | None:intergenic | 30.0% |
| GTTTGTGGATATTAAAACTG+AGG | - | chr4_2:36810912-36810931 | Msa0598990:intron | 30.0% | |
| TTGTGGATATTAAAACTGAG+GGG | - | chr4_2:36810914-36810933 | Msa0598990:intron | 30.0% | |
| !! | TTTGTTTCTAACTGTTTCTC+AGG | - | chr4_2:36811022-36811041 | Msa0598990:intron | 30.0% |
| !!! | ATTTTGGAATTACTTCAGCA+TGG | - | chr4_2:36811070-36811089 | Msa0598990:intron | 30.0% |
| !!! | TTTTGGAATTACTTCAGCAT+GGG | - | chr4_2:36811071-36811090 | Msa0598990:intron | 30.0% |
| AACTTTATGCTGTGAATTGT+GGG | - | chr4_2:36811132-36811151 | Msa0598990:intron | 30.0% | |
| ACCAAATTTAAATGCCAAAG+CGG | + | chr4_2:36811206-36811225 | None:intergenic | 30.0% | |
| TTTGGCATTTAAATTTGGTC+TGG | - | chr4_2:36811207-36811226 | Msa0598990:intron | 30.0% | |
| CATGTAAGAGATCAAAAGAT+TGG | + | chr4_2:36811235-36811254 | None:intergenic | 30.0% | |
| ! | CTTTTGATCTCTTACATGTT+AGG | - | chr4_2:36811237-36811256 | Msa0598990:intron | 30.0% |
| AAATTTAGACGCAAGTAATG+AGG | - | chr4_2:36811339-36811358 | Msa0598990:intron | 30.0% | |
| GTTATTGCTTATGATAGGAA+TGG | - | chr4_2:36811555-36811574 | Msa0598990:CDS | 30.0% | |
| AATTAACAACGTGTCTATAC+GGG | + | chr4_2:36812042-36812061 | None:intergenic | 30.0% | |
| TGCCATCAAAAATCTATAGT+TGG | - | chr4_2:36812165-36812184 | Msa0598990:intron | 30.0% | |
| ! | CACCAACTATAGATTTTTGA+TGG | + | chr4_2:36812170-36812189 | None:intergenic | 30.0% |
| TGTTGATATTCTATTCCCTA+AGG | + | chr4_2:36812199-36812218 | None:intergenic | 30.0% | |
| AGGGAATAGAATATCAACAT+TGG | - | chr4_2:36812200-36812219 | Msa0598990:intron | 30.0% | |
| TTCAATTTGATACTTGGTAC+GGG | - | chr4_2:36812269-36812288 | Msa0598990:intron | 30.0% | |
| !! | CCAAATAAACTTGGTCTTTT+AGG | + | chr4_2:36812394-36812413 | None:intergenic | 30.0% |
| CCTAAAAGACCAAGTTTATT+TGG | - | chr4_2:36812391-36812410 | Msa0598990:intron | 30.0% | |
| GTATATGAAATGGTTTACCT+GGG | + | chr4_2:36812608-36812627 | None:intergenic | 30.0% | |
| AGTATATGAAATGGTTTACC+TGG | + | chr4_2:36812609-36812628 | None:intergenic | 30.0% | |
| TATGAGTGTTATATAGGTGT+CGG | + | chr4_2:36812875-36812894 | None:intergenic | 30.0% | |
| AACTCTTGTATTTATGGTGT+GGG | + | chr4_2:36812958-36812977 | None:intergenic | 30.0% | |
| TAACTCTTGTATTTATGGTG+TGG | + | chr4_2:36812959-36812978 | None:intergenic | 30.0% | |
| GAGAAATGTTGATCAATTAG+GGG | - | chr4_2:36812989-36813008 | Msa0598990:intron | 30.0% | |
| !!! | GTCGTTTTTAACGTTTTTGA+TGG | - | chr4_2:36813035-36813054 | Msa0598990:intron | 30.0% |
| ACCGCTAGTGTAAAAAATAT+AGG | + | chr4_2:36813207-36813226 | None:intergenic | 30.0% | |
| ! | TAACAACGTAAGTTGAGTTT+CGG | + | chr4_2:36813311-36813330 | None:intergenic | 30.0% |
| TGTTATCAACAAGTAAACTG+AGG | + | chr4_2:36813371-36813390 | None:intergenic | 30.0% | |
| ! | TGTATTTTATGTACAGCATC+AGG | - | chr4_2:36813411-36813430 | Msa0598990:intron | 30.0% |
| ATACATTTCCATTACAGATC+AGG | + | chr4_2:36813575-36813594 | None:intergenic | 30.0% | |
| ! | TATGAATTTTCTGACAATCC+TGG | + | chr4_2:36813622-36813641 | None:intergenic | 30.0% |
| AATCTCATTCTCAAACTAAC+AGG | + | chr4_2:36813685-36813704 | None:intergenic | 30.0% | |
| TAAAACCAACGATTTCAAGA+AGG | + | chr4_2:36813846-36813865 | None:intergenic | 30.0% | |
| GATATGATGCAATGAAACAT+AGG | - | chr4_2:36813936-36813955 | Msa0598990:intron | 30.0% | |
| ! | AGATAGTGATTTGCATAGAT+TGG | + | chr4_2:36814102-36814121 | None:intergenic | 30.0% |
| CATATAAATCGAGATTCATG+CGG | + | chr4_2:36814142-36814161 | None:intergenic | 30.0% | |
| CAGAGTTGACAAAAAAACAA+GGG | + | chr4_2:36814199-36814218 | None:intergenic | 30.0% | |
| ACAGAGTTGACAAAAAAACA+AGG | + | chr4_2:36814200-36814219 | None:intergenic | 30.0% | |
| AGGAAAAGACAAAAGAGTAA+CGG | + | chr4_2:36814226-36814245 | None:intergenic | 30.0% | |
| TTTAGACTTGCATATATGAG+TGG | + | chr4_2:36814464-36814483 | None:intergenic | 30.0% | |
| GAGAAATATCAACATCATCT+GGG | + | chr4_2:36814600-36814619 | None:intergenic | 30.0% | |
| TGAGAAATATCAACATCATC+TGG | + | chr4_2:36814601-36814620 | None:intergenic | 30.0% | |
| AGTTACTTGAAATCTAAGCA+AGG | + | chr4_2:36814784-36814803 | None:intergenic | 30.0% | |
| AAAAGTTCAGTTCATGTGGA+AGG | + | chr4_2:36808315-36808334 | None:intergenic | 35.0% | |
| TTCAATCTCATTCCATCTTC+AGG | - | chr4_2:36808407-36808426 | Msa0598990:three_prime_UTR | 35.0% | |
| ATTATCTCAACCTTGGATTC+CGG | + | chr4_2:36808806-36808825 | None:intergenic | 35.0% | |
| ATCCAAGGTTGAGATAATTG+AGG | - | chr4_2:36808808-36808827 | Msa0598990:CDS | 35.0% | |
| TTCCTCAATTATCTCAACCT+TGG | + | chr4_2:36808813-36808832 | None:intergenic | 35.0% | |
| GTTGAGATAATTGAGGAATG+TGG | - | chr4_2:36808815-36808834 | Msa0598990:CDS | 35.0% | |
| GAGTTAACAAAAACCAAGAC+AGG | + | chr4_2:36808860-36808879 | None:intergenic | 35.0% | |
| ! | GTTTTTGTTAACTCCAAGAG+TGG | - | chr4_2:36808866-36808885 | Msa0598990:intron | 35.0% |
| AATCATTAGACTACTCGAAG+AGG | + | chr4_2:36809223-36809242 | None:intergenic | 35.0% | |
| GAAAACACTGGGTACATTAT+GGG | + | chr4_2:36809289-36809308 | None:intergenic | 35.0% | |
| TGAAAACACTGGGTACATTA+TGG | + | chr4_2:36809290-36809309 | None:intergenic | 35.0% | |
| ATTGCGGAAATGAAAACACT+GGG | + | chr4_2:36809300-36809319 | None:intergenic | 35.0% | |
| !! | TATGAGTTTGCTGATAATCG+CGG | - | chr4_2:36809329-36809348 | Msa0598990:CDS | 35.0% |
| TTGTACTTCAAGACAATTGC+TGG | - | chr4_2:36809419-36809438 | Msa0598990:intron | 35.0% | |
| TGTACTTCAAGACAATTGCT+GGG | - | chr4_2:36809420-36809439 | Msa0598990:intron | 35.0% | |
| ! | GTGGTGGAAATGTAAATTTC+AGG | - | chr4_2:36809597-36809616 | Msa0598990:intron | 35.0% |
| !! | ATTTCAGGTCTTTGATTTGG+GGG | - | chr4_2:36809612-36809631 | Msa0598990:intron | 35.0% |
| ATTTGGAAAGCCTCAAGAAA+CGG | - | chr4_2:36809674-36809693 | Msa0598990:CDS | 35.0% | |
| !! | ATAAATGCTTTAGGTTGCAG+GGG | - | chr4_2:36809851-36809870 | Msa0598990:intron | 35.0% |
| TCTCAAATTATCTCATCCTC+CGG | - | chr4_2:36809914-36809933 | Msa0598990:intron | 35.0% | |
| ! | ATCTACCTTTTGCATTTGGT+TGG | - | chr4_2:36809970-36809989 | Msa0598990:intron | 35.0% |
| ! | TCTACCTTTTGCATTTGGTT+GGG | - | chr4_2:36809971-36809990 | Msa0598990:intron | 35.0% |
| !!! | GTTGTTTTTGCTTCTTTGCA+GGG | - | chr4_2:36810319-36810338 | Msa0598990:intron | 35.0% |
| !!! | TTGTTTTTGCTTCTTTGCAG+GGG | - | chr4_2:36810320-36810339 | Msa0598990:intron | 35.0% |
| AGATCAAGTAATGAAGGCAA+AGG | - | chr4_2:36810387-36810406 | Msa0598990:intron | 35.0% | |
| TGTAGTAGCTCAATAACCAT+AGG | + | chr4_2:36810550-36810569 | None:intergenic | 35.0% | |
| TGAAGCGGATGAACTTAATA+GGG | - | chr4_2:36810726-36810745 | Msa0598990:intron | 35.0% | |
| AGAATAGAAGCCTAATTGCT+AGG | - | chr4_2:36810816-36810835 | Msa0598990:intron | 35.0% | |
| GAATAGAAGCCTAATTGCTA+GGG | - | chr4_2:36810817-36810836 | Msa0598990:intron | 35.0% | |
| AATAGAAGCCTAATTGCTAG+GGG | - | chr4_2:36810818-36810837 | Msa0598990:intron | 35.0% | |
| !! | GAGACAGTACTTATTTTCCT+AGG | - | chr4_2:36810936-36810955 | Msa0598990:intron | 35.0% |
| ! | TTTCTAACTGTTTCTCAGGA+AGG | - | chr4_2:36811026-36811045 | Msa0598990:intron | 35.0% |
| CAATTCACAGCATAAAGTTC+AGG | + | chr4_2:36811131-36811150 | None:intergenic | 35.0% | |
| GAACTTTATGCTGTGAATTG+TGG | - | chr4_2:36811131-36811150 | Msa0598990:intron | 35.0% | |
| !! | AATTCATTTTGTTGCCGCTT+TGG | - | chr4_2:36811189-36811208 | Msa0598990:intron | 35.0% |
| CAAAAACCAATTGGTGAATC+AGG | - | chr4_2:36811633-36811652 | Msa0598990:intron | 35.0% | |
| TCAGTAATTATGTGCGCATA+TGG | - | chr4_2:36811671-36811690 | Msa0598990:intron | 35.0% | |
| TTAAGAGTCAGAGTCAAACA+AGG | + | chr4_2:36811704-36811723 | None:intergenic | 35.0% | |
| GAAATTAGGAACACAGTATC+AGG | + | chr4_2:36811787-36811806 | None:intergenic | 35.0% | |
| TAGGAAAGGAAACAGTTACA+GGG | + | chr4_2:36812006-36812025 | None:intergenic | 35.0% | |
| ATTAACAACGTGTCTATACG+GGG | + | chr4_2:36812041-36812060 | None:intergenic | 35.0% | |
| !! | ATAGTTGGTGATGAATCCTT+AGG | - | chr4_2:36812180-36812199 | Msa0598990:intron | 35.0% |
| !! | TAGTTGGTGATGAATCCTTA+GGG | - | chr4_2:36812181-36812200 | Msa0598990:intron | 35.0% |
| ! | GCATTGTCATTTGCATACAT+AGG | - | chr4_2:36812485-36812504 | Msa0598990:CDS | 35.0% |
| GATTCTTTAATGCAGGAACA+TGG | - | chr4_2:36812520-36812539 | Msa0598990:CDS | 35.0% | |
| GTAAAGATCATGCAAAAACC+TGG | - | chr4_2:36812557-36812576 | Msa0598990:intron | 35.0% | |
| TTTGTCAAGTTAGCAATGCT+GGG | + | chr4_2:36812691-36812710 | None:intergenic | 35.0% | |
| TGACAAAGATCTATGAAGCA+CGG | - | chr4_2:36812704-36812723 | Msa0598990:intron | 35.0% | |
| TAACATATATGTAGCGGTGT+AGG | - | chr4_2:36813178-36813197 | Msa0598990:intron | 35.0% | |
| TGATCTTTGTCTATGAAGCA+TGG | + | chr4_2:36813276-36813295 | None:intergenic | 35.0% | |
| TAAACTGAGGAAAAGGCAAT+AGG | + | chr4_2:36813358-36813377 | None:intergenic | 35.0% | |
| CAACAAGTAAACTGAGGAAA+AGG | + | chr4_2:36813365-36813384 | None:intergenic | 35.0% | |
| TTAAATCCACCAGAAAAGCT+TGG | + | chr4_2:36813458-36813477 | None:intergenic | 35.0% | |
| !! | TTTCTGGTGGATTTAATCCA+TGG | - | chr4_2:36813462-36813481 | Msa0598990:CDS | 35.0% |
| !! | TTCTGGTGGATTTAATCCAT+GGG | - | chr4_2:36813463-36813482 | Msa0598990:CDS | 35.0% |
| GGAGAGGAAACAAAAGAATT+AGG | + | chr4_2:36813531-36813550 | None:intergenic | 35.0% | |
| CATTTGAACCTGATCTGTAA+TGG | - | chr4_2:36813564-36813583 | Msa0598990:intron | 35.0% | |
| TGGTCTGTATGGTAATTGTT+GGG | + | chr4_2:36813602-36813621 | None:intergenic | 35.0% | |
| !!! | TCGTTGGTTTTAGAAATGCA+TGG | - | chr4_2:36813854-36813873 | Msa0598990:intron | 35.0% |
| TCGCATAACAACGATAACTA+TGG | + | chr4_2:36814042-36814061 | None:intergenic | 35.0% | |
| TCTATGTGCCTAATGAAACA+GGG | + | chr4_2:36814302-36814321 | None:intergenic | 35.0% | |
| TTCTATGTGCCTAATGAAAC+AGG | + | chr4_2:36814303-36814322 | None:intergenic | 35.0% | |
| TTCATTAGGCACATAGAATC+CGG | - | chr4_2:36814305-36814324 | Msa0598990:CDS | 35.0% | |
| CATACATTCATGAGGATTGA+TGG | - | chr4_2:36814355-36814374 | Msa0598990:CDS | 35.0% | |
| TGTCATCTTCTTCATTGTCA+TGG | + | chr4_2:36814513-36814532 | None:intergenic | 35.0% | |
| ACTGCAAGAATTGAGCAAAT+TGG | + | chr4_2:36814709-36814728 | None:intergenic | 35.0% | |
| ATAGTTGAGGGGGAAATATT+GGG | + | chr4_2:36814761-36814780 | None:intergenic | 35.0% | |
| ATCTAAGCAAGGATAGTTGA+GGG | + | chr4_2:36814773-36814792 | None:intergenic | 35.0% | |
| AATCTAAGCAAGGATAGTTG+AGG | + | chr4_2:36814774-36814793 | None:intergenic | 35.0% | |
| AAACCTGAATCATAGTACCA+GGG | + | chr4_2:36814814-36814833 | None:intergenic | 35.0% | |
| ! | TCTTCTGTAGCATTGGGATT+CGG | + | chr4_2:36808280-36808299 | None:intergenic | 40.0% |
| ! | GAGGTATCTTCTGTAGCATT+GGG | + | chr4_2:36808286-36808305 | None:intergenic | 40.0% |
| TTCATGTGGAAGGAATTACG+AGG | + | chr4_2:36808305-36808324 | None:intergenic | 40.0% | |
| AGGGAAAAGTTCAGTTCATG+TGG | + | chr4_2:36808319-36808338 | None:intergenic | 40.0% | |
| TATGTGTGTGTACCTGAAGA+TGG | + | chr4_2:36808422-36808441 | None:intergenic | 40.0% | |
| TCCGGATTACATTCTTGTAC+CGG | - | chr4_2:36808784-36808803 | Msa0598990:CDS | 40.0% | |
| TCCGGTACAAGAATGTAATC+CGG | + | chr4_2:36808788-36808807 | None:intergenic | 40.0% | |
| AAAACCAAGACAGGACACTT+AGG | + | chr4_2:36808851-36808870 | None:intergenic | 40.0% | |
| TTTGTTAACTCCAAGAGTGG+TGG | - | chr4_2:36808869-36808888 | Msa0598990:intron | 40.0% | |
| GTGTACGGTATGTTTGTAAG+AGG | + | chr4_2:36808910-36808929 | None:intergenic | 40.0% | |
| CAAGTTTGACTATTTGCGAG+AGG | + | chr4_2:36809143-36809162 | None:intergenic | 40.0% | |
| TCGAGTAGTCTAATGATTGC+TGG | - | chr4_2:36809225-36809244 | Msa0598990:intron | 40.0% | |
| GATTGCGGAAATGAAAACAC+TGG | + | chr4_2:36809301-36809320 | None:intergenic | 40.0% | |
| GAGAACGGTCTATGCTAATT+TGG | - | chr4_2:36809657-36809676 | Msa0598990:intron | 40.0% | |
| TTTGGAAAGCCTCAAGAAAC+GGG | - | chr4_2:36809675-36809694 | Msa0598990:CDS | 40.0% | |
| TTGCTATGAAGATCATGGAG+AGG | - | chr4_2:36809707-36809726 | Msa0598990:CDS | 40.0% | |
| !! | TAAATGCTTTAGGTTGCAGG+GGG | - | chr4_2:36809852-36809871 | Msa0598990:intron | 40.0% |
| ! | TGAAGAGCTTTTATTAGGCC+TGG | - | chr4_2:36810092-36810111 | Msa0598990:intron | 40.0% |
| GAGTTACAGCCAAAAACTTC+AGG | + | chr4_2:36810272-36810291 | None:intergenic | 40.0% | |
| !!! | CGTTGTTTTTGCTTCTTTGC+AGG | - | chr4_2:36810318-36810337 | Msa0598990:intron | 40.0% |
| ! | GGTTCTTTTAATGCTTCAGC+TGG | - | chr4_2:36810605-36810624 | Msa0598990:CDS | 40.0% |
| TCAGCTGGCATATTCTTATG+AGG | - | chr4_2:36810620-36810639 | Msa0598990:intron | 40.0% | |
| AAAGAATGTGGCAACTCAAG+TGG | + | chr4_2:36810685-36810704 | None:intergenic | 40.0% | |
| CTGAAGCGGATGAACTTAAT+AGG | - | chr4_2:36810725-36810744 | Msa0598990:intron | 40.0% | |
| ATAGAAGCCTAATTGCTAGG+GGG | - | chr4_2:36810819-36810838 | Msa0598990:intron | 40.0% | |
| ! | GTTCAGGTTCAGAAGAAATG+AGG | + | chr4_2:36811115-36811134 | None:intergenic | 40.0% |
| ! | GCCGCTTTGGCATTTAAATT+TGG | - | chr4_2:36811202-36811221 | Msa0598990:intron | 40.0% |
| TGCATACCTGATTCACCAAT+TGG | + | chr4_2:36811642-36811661 | None:intergenic | 40.0% | |
| TAGAGTACGTATGCTAAGCT+TGG | - | chr4_2:36811818-36811837 | Msa0598990:intron | 40.0% | |
| ! | GGAAGAAGGATGCTTTAAAC+CGG | + | chr4_2:36811867-36811886 | None:intergenic | 40.0% |
| ! | GTTTAAAGCATCCTTCTTCC+AGG | - | chr4_2:36811867-36811886 | Msa0598990:intron | 40.0% |
| AGGAAAGGAAACAGTTACAG+GGG | + | chr4_2:36812005-36812024 | None:intergenic | 40.0% | |
| CTAGGAAAGGAAACAGTTAC+AGG | + | chr4_2:36812007-36812026 | None:intergenic | 40.0% | |
| GGTGGTTAATGATTGGAACA+AGG | - | chr4_2:36812318-36812337 | Msa0598990:intron | 40.0% | |
| TCATGCAAAAACCTGGTCAA+TGG | - | chr4_2:36812564-36812583 | Msa0598990:intron | 40.0% | |
| ! | TTTACCTGGGAGGTATGTTT+AGG | + | chr4_2:36812595-36812614 | None:intergenic | 40.0% |
| TATGAAATGGTTTACCTGGG+AGG | + | chr4_2:36812605-36812624 | None:intergenic | 40.0% | |
| CTTTGTCAAGTTAGCAATGC+TGG | + | chr4_2:36812692-36812711 | None:intergenic | 40.0% | |
| GGCTCGTATGAGTGTTATAT+AGG | + | chr4_2:36812881-36812900 | None:intergenic | 40.0% | |
| !!! | CTTAACTTGCCAAGCTTTTC+TGG | - | chr4_2:36813446-36813465 | Msa0598990:CDS | 40.0% |
| !! | TCTGGTGGATTTAATCCATG+GGG | - | chr4_2:36813464-36813483 | Msa0598990:CDS | 40.0% |
| !! | CTTTTGTTTCCTCTCCTTTC+TGG | - | chr4_2:36813535-36813554 | Msa0598990:intron | 40.0% |
| CTGGTCTGTATGGTAATTGT+TGG | + | chr4_2:36813603-36813622 | None:intergenic | 40.0% | |
| CAACAATTACCATACAGACC+AGG | - | chr4_2:36813601-36813620 | Msa0598990:intron | 40.0% | |
| !!! | GGTTTTAGAAATGCATGGCA+TGG | - | chr4_2:36813859-36813878 | Msa0598990:intron | 40.0% |
| !!! | CTTGTTTTGCTTGCTCCAAA+AGG | - | chr4_2:36813883-36813902 | Msa0598990:intron | 40.0% |
| CTATGTGCCTAATGAAACAG+GGG | + | chr4_2:36814301-36814320 | None:intergenic | 40.0% | |
| !! | ATCCGGTTTGAGTTTTGCAA+AGG | - | chr4_2:36814322-36814341 | Msa0598990:CDS | 40.0% |
| CACCTTTGCAAAACTCAAAC+CGG | + | chr4_2:36814327-36814346 | None:intergenic | 40.0% | |
| GAGCAGATCATACATTCATG+AGG | - | chr4_2:36814347-36814366 | Msa0598990:CDS | 40.0% | |
| TCTTCTTCATTGTCATGGTG+TGG | + | chr4_2:36814508-36814527 | None:intergenic | 40.0% | |
| TAGTTGAGGGGGAAATATTG+GGG | + | chr4_2:36814760-36814779 | None:intergenic | 40.0% | |
| GATAGTTGAGGGGGAAATAT+TGG | + | chr4_2:36814762-36814781 | None:intergenic | 40.0% | |
| TCTAAGCAAGGATAGTTGAG+GGG | + | chr4_2:36814772-36814791 | None:intergenic | 40.0% | |
| CAAACCTGAATCATAGTACC+AGG | + | chr4_2:36814815-36814834 | None:intergenic | 40.0% | |
| ! | CTGGTACTATGATTCAGGTT+TGG | - | chr4_2:36814813-36814832 | Msa0598990:five_prime_UTR | 40.0% |
| ! | CTTCTGTAGCATTGGGATTC+GGG | + | chr4_2:36808279-36808298 | None:intergenic | 45.0% |
| ! | CGAGGTATCTTCTGTAGCAT+TGG | + | chr4_2:36808287-36808306 | None:intergenic | 45.0% |
| CATTCTTGTACCGGAATCCA+AGG | - | chr4_2:36808793-36808812 | Msa0598990:CDS | 45.0% | |
| TGTACCTAAGTGTCCTGTCT+TGG | - | chr4_2:36808844-36808863 | Msa0598990:intron | 45.0% | |
| !! | AATTTCGTAAGTGGGCTGAG+TGG | - | chr4_2:36809578-36809597 | Msa0598990:intron | 45.0% |
| TTGGAAAGCCTCAAGAAACG+GGG | - | chr4_2:36809676-36809695 | Msa0598990:CDS | 45.0% | |
| ATTCATCACCCCGTTTCTTG+AGG | + | chr4_2:36809687-36809706 | None:intergenic | 45.0% | |
| AAGGGAACAGTAGCTATTGC+CGG | + | chr4_2:36809936-36809955 | None:intergenic | 45.0% | |
| GCAATAGCTACTGTTCCCTT+GGG | - | chr4_2:36809936-36809955 | Msa0598990:intron | 45.0% | |
| CCTACCCAACCAAATGCAAA+AGG | + | chr4_2:36809978-36809997 | None:intergenic | 45.0% | |
| ! | CCTTTTGCATTTGGTTGGGT+AGG | - | chr4_2:36809975-36809994 | Msa0598990:intron | 45.0% |
| !! | TTAAAACAAGAAGGGGCACC+AGG | + | chr4_2:36810113-36810132 | None:intergenic | 45.0% |
| AGGATGAGAGCTCCAAAAGA+AGG | - | chr4_2:36810640-36810659 | Msa0598990:intron | 45.0% | |
| ! | GGATCACAGGAACCTTCTTT+TGG | + | chr4_2:36810655-36810674 | None:intergenic | 45.0% |
| ! | TGGAAGGCATGCAAAGAATG+TGG | + | chr4_2:36810697-36810716 | None:intergenic | 45.0% |
| CTTCCATCGTGTATCTGAAG+CGG | - | chr4_2:36810711-36810730 | Msa0598990:intron | 45.0% | |
| ATTCCAAAATCCGCCACGAA+AGG | + | chr4_2:36811060-36811079 | None:intergenic | 45.0% | |
| !!! | ACGCAAGGATGGTTTTTTGC+CGG | - | chr4_2:36811845-36811864 | Msa0598990:intron | 45.0% |
| TAGTGAACTGACCTGGAAGA+AGG | + | chr4_2:36811881-36811900 | None:intergenic | 45.0% | |
| CAGATCTTAGTGAACTGACC+TGG | + | chr4_2:36811888-36811907 | None:intergenic | 45.0% | |
| ! | ATTTTCTGCACATGCCCATC+TGG | - | chr4_2:36812083-36812102 | Msa0598990:CDS | 45.0% |
| ! | TTTTCTGCACATGCCCATCT+GGG | - | chr4_2:36812084-36812103 | Msa0598990:CDS | 45.0% |
| GAGCTAACAAGTTCCCAGAT+GGG | + | chr4_2:36812100-36812119 | None:intergenic | 45.0% | |
| !! | ATTATGGGCACTGACCAATG+CGG | - | chr4_2:36812139-36812158 | Msa0598990:intron | 45.0% |
| !! | TTTTGATGGCAAAGCCGCAT+TGG | + | chr4_2:36812156-36812175 | None:intergenic | 45.0% |
| TTGATACTTGGTACGGGTTC+TGG | - | chr4_2:36812275-36812294 | Msa0598990:intron | 45.0% | |
| GTAAATGCTGGTCAGAGACT+CGG | - | chr4_2:36812297-36812316 | Msa0598990:intron | 45.0% | |
| !! | GAGACTCGGTGGTTAATGAT+TGG | - | chr4_2:36812311-36812330 | Msa0598990:intron | 45.0% |
| TTTAGGTCTTGCCATTGACC+AGG | + | chr4_2:36812578-36812597 | None:intergenic | 45.0% | |
| AAGACCTAAACATACCTCCC+AGG | - | chr4_2:36812588-36812607 | Msa0598990:intron | 45.0% | |
| ! | TACGAGTGTCATAGGAGTGT+TGG | + | chr4_2:36812783-36812802 | None:intergenic | 45.0% |
| TTTGTCTGAGTTGTCCGACA+CGG | + | chr4_2:36812902-36812921 | None:intergenic | 45.0% | |
| ! | AACTTGCCAAGCTTTTCTGG+TGG | - | chr4_2:36813449-36813468 | Msa0598990:CDS | 45.0% |
| TTCAAATGCCAGTGCCAGAA+AGG | + | chr4_2:36813552-36813571 | None:intergenic | 45.0% | |
| TCTGACAATCCTGGTCTGTA+TGG | + | chr4_2:36813613-36813632 | None:intergenic | 45.0% | |
| AGATTTGACACCGCCATATG+TGG | - | chr4_2:36813813-36813832 | Msa0598990:intron | 45.0% | |
| AGAAGGCCATCATCCACATA+TGG | + | chr4_2:36813829-36813848 | None:intergenic | 45.0% | |
| GATGGCCTTCTTGAAATCGT+TGG | - | chr4_2:36813838-36813857 | Msa0598990:intron | 45.0% | |
| TTGCTTGCTCCAAAAGGACA+TGG | - | chr4_2:36813889-36813908 | Msa0598990:intron | 45.0% | |
| ! | AGACGAGTTCCATGTCCTTT+TGG | + | chr4_2:36813901-36813920 | None:intergenic | 45.0% |
| TCCTTCTCCCCTGTTTCATT+AGG | - | chr4_2:36814291-36814310 | Msa0598990:CDS | 45.0% | |
| !! | CGGTTTGAGTTTTGCAAAGG+TGG | - | chr4_2:36814325-36814344 | Msa0598990:CDS | 45.0% |
| TGAGGATTGATGGAGAACCT+TGG | - | chr4_2:36814365-36814384 | Msa0598990:CDS | 45.0% | |
| !! | GCTGGAAGATGTTGTTTCCA+AGG | + | chr4_2:36814385-36814404 | None:intergenic | 45.0% |
| GTGAGAAATCTCTACCACGA+CGG | + | chr4_2:36814419-36814438 | None:intergenic | 45.0% | |
| GTGGTAGAGATTTCTCACCT+TGG | - | chr4_2:36814421-36814440 | Msa0598990:intron | 45.0% | |
| AGAGATTTCTCACCTTGGTC+AGG | - | chr4_2:36814426-36814445 | Msa0598990:intron | 45.0% | |
| CAAGCATGTTAACCTGACCA+AGG | + | chr4_2:36814441-36814460 | None:intergenic | 45.0% | |
| ! | TTGTCATGGTGTGGTGATGA+AGG | + | chr4_2:36814499-36814518 | None:intergenic | 45.0% |
| GACAGTGATGAAGAAGACAC+TGG | - | chr4_2:36814529-36814548 | Msa0598990:intron | 45.0% | |
| ACACTGGAGCAGAGGAATAT+CGG | - | chr4_2:36814545-36814564 | Msa0598990:intron | 45.0% | |
| GCAGAGGAATATCGGAAGTT+TGG | - | chr4_2:36814553-36814572 | Msa0598990:intron | 45.0% | |
| !! | ATATCGGAAGTTTGGTGCAG+CGG | - | chr4_2:36814561-36814580 | Msa0598990:intron | 45.0% |
| CTAAGCAAGGATAGTTGAGG+GGG | + | chr4_2:36814771-36814790 | None:intergenic | 45.0% | |
| TCAAGTAACTCTAACGACCC+TGG | - | chr4_2:36814794-36814813 | Msa0598990:five_prime_UTR | 45.0% | |
| !!! | TCATTTTTTAAAATTATTAT+CGG | + | chr4_2:36808557-36808576 | None:intergenic | 5.0% |
| !!! | ATATTTTATTTTTAACAATT+AGG | + | chr4_2:36811533-36811552 | None:intergenic | 5.0% |
| !! | AAATTTATCTATTAAAAAAA+TGG | + | chr4_2:36814860-36814879 | None:intergenic | 5.0% |
| !!! | ATTTAAGTATAATAAATTTT+AGG | - | chr4_2:36814876-36814895 | Msa0598990:five_prime_UTR | 5.0% |
| TGTGCAGCTGCATGCAACAA+TGG | - | chr4_2:36808733-36808752 | Msa0598990:CDS | 50.0% | |
| !! | TCCTGATAAGGCGCTGAGAA+CGG | - | chr4_2:36809642-36809661 | Msa0598990:intron | 50.0% |
| GGCAATAGCTACTGTTCCCT+TGG | - | chr4_2:36809935-36809954 | Msa0598990:intron | 50.0% | |
| AGATTGTTCCCTGTGCCCAA+GGG | + | chr4_2:36809954-36809973 | None:intergenic | 50.0% | |
| TAGATTGTTCCCTGTGCCCA+AGG | + | chr4_2:36809955-36809974 | None:intergenic | 50.0% | |
| TTGCAGGGGAAGAAGAATCC+AGG | - | chr4_2:36810334-36810353 | Msa0598990:intron | 50.0% | |
| TGCAGGGGAAGAAGAATCCA+GGG | - | chr4_2:36810335-36810354 | Msa0598990:intron | 50.0% | |
| GACAGATCAACGCTCAGTTG+TGG | - | chr4_2:36810357-36810376 | Msa0598990:intron | 50.0% | |
| ! | GCAAACTGCCACTTGAGCTA+CGG | - | chr4_2:36810523-36810542 | Msa0598990:intron | 50.0% |
| AAGTGGCGCAATTGGATCAC+AGG | + | chr4_2:36810668-36810687 | None:intergenic | 50.0% | |
| CGCTTCAGATACACGATGGA+AGG | + | chr4_2:36810713-36810732 | None:intergenic | 50.0% | |
| CATCCGCTTCAGATACACGA+TGG | + | chr4_2:36810717-36810736 | None:intergenic | 50.0% | |
| ACAGTGTCCCCCTAGCAATT+AGG | + | chr4_2:36810829-36810848 | None:intergenic | 50.0% | |
| AAAATCCGCCACGAAAGGTG+TGG | + | chr4_2:36811055-36811074 | None:intergenic | 50.0% | |
| !!! | ACACCTTTCGTGGCGGATTT+TGG | - | chr4_2:36811054-36811073 | Msa0598990:intron | 50.0% |
| GGTGGGGATAAGTCTAGGAA+AGG | + | chr4_2:36812020-36812039 | None:intergenic | 50.0% | |
| ACAACGTGTCTATACGGGGT+GGG | + | chr4_2:36812037-36812056 | None:intergenic | 50.0% | |
| AACAACGTGTCTATACGGGG+TGG | + | chr4_2:36812038-36812057 | None:intergenic | 50.0% | |
| GGAGCTAACAAGTTCCCAGA+TGG | + | chr4_2:36812101-36812120 | None:intergenic | 50.0% | |
| ! | GTACGGGTTCTGGTAAATGC+TGG | - | chr4_2:36812285-36812304 | Msa0598990:intron | 50.0% |
| ATCTATGAAGCACGGAGCCA+CGG | - | chr4_2:36812712-36812731 | Msa0598990:intron | 50.0% | |
| ACGTGTCGTACGAGTGTCAT+AGG | + | chr4_2:36812791-36812810 | None:intergenic | 50.0% | |
| AACACTCATACGAGCCGTGT+CGG | - | chr4_2:36812885-36812904 | Msa0598990:intron | 50.0% | |
| ATGAAGCATGGACTCCGACA+CGG | + | chr4_2:36813264-36813283 | None:intergenic | 50.0% | |
| TAGGCAGCAGACAAAAGAGC+AGG | + | chr4_2:36813339-36813358 | None:intergenic | 50.0% | |
| TCACGTTGCTTCTTCCTGCT+GGG | + | chr4_2:36813494-36813513 | None:intergenic | 50.0% | |
| ATCACGTTGCTTCTTCCTGC+TGG | + | chr4_2:36813495-36813514 | None:intergenic | 50.0% | |
| ! | TTTCCTCTCCTTTCTGGCAC+TGG | - | chr4_2:36813541-36813560 | Msa0598990:intron | 50.0% |
| ACACCGCCATATGTGGATGA+TGG | - | chr4_2:36813820-36813839 | Msa0598990:intron | 50.0% | |
| AGGCCATCATCCACATATGG+CGG | + | chr4_2:36813826-36813845 | None:intergenic | 50.0% | |
| ACATGGAACTCGTCTTGCTC+AGG | - | chr4_2:36813906-36813925 | Msa0598990:intron | 50.0% | |
| GCCTAATGAAACAGGGGAGA+AGG | + | chr4_2:36814295-36814314 | None:intergenic | 50.0% | |
| ACGACGGTATCATCATCAGC+TGG | + | chr4_2:36814403-36814422 | None:intergenic | 50.0% | |
| ! | AGCTGATGATGATACCGTCG+TGG | - | chr4_2:36814402-36814421 | Msa0598990:exon | 50.0% |
| TGAAGAAGACACTGGAGCAG+AGG | - | chr4_2:36814537-36814556 | Msa0598990:intron | 50.0% | |
| CGACCCTGGTACTATGATTC+AGG | - | chr4_2:36814808-36814827 | Msa0598990:five_prime_UTR | 50.0% | |
| AATGGACACACAAGCTCGAG+AGG | + | chr4_2:36814842-36814861 | None:intergenic | 50.0% | |
| TCCAAGAGTGGTGGTCAGCT+TGG | - | chr4_2:36808878-36808897 | Msa0598990:intron | 55.0% | |
| TCCAAGCTGACCACCACTCT+TGG | + | chr4_2:36808882-36808901 | None:intergenic | 55.0% | |
| AAGAGTGGTGGTCAGCTTGG+AGG | - | chr4_2:36808881-36808900 | Msa0598990:intron | 55.0% | |
| AGAGTGGTGGTCAGCTTGGA+GGG | - | chr4_2:36808882-36808901 | Msa0598990:intron | 55.0% | |
| !! | TTCGTAAGTGGGCTGAGTGG+TGG | - | chr4_2:36809581-36809600 | Msa0598990:intron | 55.0% |
| GGGGGAAACTGCTCCTGATA+AGG | - | chr4_2:36809630-36809649 | Msa0598990:intron | 55.0% | |
| ACCGTTCTCAGCGCCTTATC+AGG | + | chr4_2:36809646-36809665 | None:intergenic | 55.0% | |
| GGAACAGTAGCTATTGCCGG+AGG | + | chr4_2:36809933-36809952 | None:intergenic | 55.0% | |
| CTACTGTTCCCTTGGGCACA+GGG | - | chr4_2:36809943-36809962 | Msa0598990:intron | 55.0% | |
| !! | ACTGAGCGTTGATCTGTCCC+TGG | + | chr4_2:36810355-36810374 | None:intergenic | 55.0% |
| CCATAGGTCCGTAGCTCAAG+TGG | + | chr4_2:36810534-36810553 | None:intergenic | 55.0% | |
| CCACTTGAGCTACGGACCTA+TGG | - | chr4_2:36810531-36810550 | Msa0598990:intron | 55.0% | |
| GGCAACTCAAGTGGCGCAAT+TGG | + | chr4_2:36810676-36810695 | None:intergenic | 55.0% | |
| GAAGGTTGCCACACCTTTCG+TGG | - | chr4_2:36811044-36811063 | Msa0598990:intron | 55.0% | |
| GCTAAGCTTGGATGCACGCA+AGG | - | chr4_2:36811830-36811849 | Msa0598990:intron | 55.0% | |
| AGCTTGGATGCACGCAAGGA+TGG | - | chr4_2:36811834-36811853 | Msa0598990:intron | 55.0% | |
| TACGGGGTGGGGATAAGTCT+AGG | + | chr4_2:36812025-36812044 | None:intergenic | 55.0% | |
| CAACGTGTCTATACGGGGTG+GGG | + | chr4_2:36812036-36812055 | None:intergenic | 55.0% | |
| AATGCTGGTCAGAGACTCGG+TGG | - | chr4_2:36812300-36812319 | Msa0598990:intron | 55.0% | |
| !! | CTCTAGGACTAGGCATGTCG+CGG | - | chr4_2:36812739-36812758 | Msa0598990:intron | 55.0% |
| TCGTACGACACGTGTCGAAC+CGG | - | chr4_2:36812798-36812817 | Msa0598990:CDS | 55.0% | |
| !! | AGGTGTCGGACACTGATCGT+AGG | + | chr4_2:36812861-36812880 | None:intergenic | 55.0% |
| CACCTGACACGACACTGACA+CGG | + | chr4_2:36813240-36813259 | None:intergenic | 55.0% | |
| ATGCCAGTGCCAGAAAGGAG+AGG | + | chr4_2:36813547-36813566 | None:intergenic | 55.0% | |
| GAGTGGTGGTCAGCTTGGAG+GGG | - | chr4_2:36808883-36808902 | Msa0598990:intron | 60.0% | |
| !! | CTTTAGGTTGCAGGGGGCGA+CGG | - | chr4_2:36809858-36809877 | Msa0598990:intron | 60.0% |
| ! | GGAACAGCAGGCTGGCTACT+TGG | - | chr4_2:36809879-36809898 | Msa0598990:intron | 60.0% |
| GCTACTGTTCCCTTGGGCAC+AGG | - | chr4_2:36809942-36809961 | Msa0598990:intron | 60.0% | |
| GGTTGCCACACCTTTCGTGG+CGG | - | chr4_2:36811047-36811066 | Msa0598990:intron | 60.0% | |
| !! | CCTAGTCCTAGAGGTGTCCG+TGG | + | chr4_2:36812732-36812751 | None:intergenic | 60.0% |
| !! | CCACGGACACCTCTAGGACT+AGG | - | chr4_2:36812729-36812748 | Msa0598990:intron | 60.0% |
| CGCGACATGCCTAGTCCTAG+AGG | + | chr4_2:36812741-36812760 | None:intergenic | 60.0% | |
| GTCCGTGTCAGTGTCGTGTC+AGG | - | chr4_2:36813235-36813254 | Msa0598990:CDS | 60.0% | |
| GTCGTGTCAGGTGTCCGTGT+CGG | - | chr4_2:36813247-36813266 | Msa0598990:CDS | 60.0% | |
| ATCCATGGGGTACACCCAGC+AGG | - | chr4_2:36813477-36813496 | Msa0598990:CDS | 60.0% | |
| TTCCTGCTGGGTGTACCCCA+TGG | + | chr4_2:36813482-36813501 | None:intergenic | 60.0% | |
| CAAGGGCTGCTACACAGCTC+AGG | + | chr4_2:36814182-36814201 | None:intergenic | 60.0% | |
| ACGGAGCCACGGACACCTCT+AGG | - | chr4_2:36812723-36812742 | Msa0598990:intron | 65.0% | |
| TCGCGGTGTCTGACACGCGT+CGG | - | chr4_2:36812756-36812775 | Msa0598990:CDS | 65.0% | |
| GCAGGGGGCGACGGAACAGC+AGG | - | chr4_2:36809867-36809886 | Msa0598990:intron | 75.0% | |
| GGGGCGACGGAACAGCAGGC+TGG | - | chr4_2:36809871-36809890 | Msa0598990:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 36808269 | 36814903 | 36808269 | ID=Msa0598990;Name=Msa0598990 |
| chr4_2 | mRNA | 36808269 | 36814903 | 36808269 | ID=Msa0598990-mRNA-1;Parent=Msa0598990;Name=Msa0598990-mRNA-1;_AED=0.12;_eAED=0.12;_QI=172|1|1|1|0.91|0.84|13|273|484 |
| chr4_2 | exon | 36808269 | 36808859 | 36808269 | ID=Msa0598990-mRNA-1:exon:8327;Parent=Msa0598990-mRNA-1 |
| chr4_2 | exon | 36809245 | 36809361 | 36809245 | ID=Msa0598990-mRNA-1:exon:8326;Parent=Msa0598990-mRNA-1 |
| chr4_2 | exon | 36809658 | 36809745 | 36809658 | ID=Msa0598990-mRNA-1:exon:8325;Parent=Msa0598990-mRNA-1 |
| chr4_2 | exon | 36810563 | 36810637 | 36810563 | ID=Msa0598990-mRNA-1:exon:8324;Parent=Msa0598990-mRNA-1 |
| chr4_2 | exon | 36811284 | 36811351 | 36811284 | ID=Msa0598990-mRNA-1:exon:8323;Parent=Msa0598990-mRNA-1 |
| chr4_2 | exon | 36811518 | 36811600 | 36811518 | ID=Msa0598990-mRNA-1:exon:8322;Parent=Msa0598990-mRNA-1 |
| chr4_2 | exon | 36812080 | 36812128 | 36812080 | ID=Msa0598990-mRNA-1:exon:8321;Parent=Msa0598990-mRNA-1 |
| chr4_2 | exon | 36812425 | 36812548 | 36812425 | ID=Msa0598990-mRNA-1:exon:8320;Parent=Msa0598990-mRNA-1 |
| chr4_2 | exon | 36812747 | 36812832 | 36812747 | ID=Msa0598990-mRNA-1:exon:8319;Parent=Msa0598990-mRNA-1 |
| chr4_2 | exon | 36813180 | 36813308 | 36813180 | ID=Msa0598990-mRNA-1:exon:8318;Parent=Msa0598990-mRNA-1 |
| chr4_2 | exon | 36813431 | 36813553 | 36813431 | ID=Msa0598990-mRNA-1:exon:8317;Parent=Msa0598990-mRNA-1 |
| chr4_2 | exon | 36814226 | 36814432 | 36814226 | ID=Msa0598990-mRNA-1:exon:8316;Parent=Msa0598990-mRNA-1 |
| chr4_2 | exon | 36814744 | 36814903 | 36814744 | ID=Msa0598990-mRNA-1:exon:8315;Parent=Msa0598990-mRNA-1 |
| chr4_2 | five_prime_UTR | 36814744 | 36814903 | 36814744 | ID=Msa0598990-mRNA-1:five_prime_utr;Parent=Msa0598990-mRNA-1 |
| chr4_2 | five_prime_UTR | 36814421 | 36814432 | 36814421 | ID=Msa0598990-mRNA-1:five_prime_utr;Parent=Msa0598990-mRNA-1 |
| chr4_2 | CDS | 36814226 | 36814420 | 36814226 | ID=Msa0598990-mRNA-1:cds;Parent=Msa0598990-mRNA-1 |
| chr4_2 | CDS | 36813431 | 36813553 | 36813431 | ID=Msa0598990-mRNA-1:cds;Parent=Msa0598990-mRNA-1 |
| chr4_2 | CDS | 36813180 | 36813308 | 36813180 | ID=Msa0598990-mRNA-1:cds;Parent=Msa0598990-mRNA-1 |
| chr4_2 | CDS | 36812747 | 36812832 | 36812747 | ID=Msa0598990-mRNA-1:cds;Parent=Msa0598990-mRNA-1 |
| chr4_2 | CDS | 36812425 | 36812548 | 36812425 | ID=Msa0598990-mRNA-1:cds;Parent=Msa0598990-mRNA-1 |
| chr4_2 | CDS | 36812080 | 36812128 | 36812080 | ID=Msa0598990-mRNA-1:cds;Parent=Msa0598990-mRNA-1 |
| chr4_2 | CDS | 36811518 | 36811600 | 36811518 | ID=Msa0598990-mRNA-1:cds;Parent=Msa0598990-mRNA-1 |
| chr4_2 | CDS | 36811284 | 36811351 | 36811284 | ID=Msa0598990-mRNA-1:cds;Parent=Msa0598990-mRNA-1 |
| chr4_2 | CDS | 36810563 | 36810637 | 36810563 | ID=Msa0598990-mRNA-1:cds;Parent=Msa0598990-mRNA-1 |
| chr4_2 | CDS | 36809658 | 36809745 | 36809658 | ID=Msa0598990-mRNA-1:cds;Parent=Msa0598990-mRNA-1 |
| chr4_2 | CDS | 36809245 | 36809361 | 36809245 | ID=Msa0598990-mRNA-1:cds;Parent=Msa0598990-mRNA-1 |
| chr4_2 | CDS | 36808542 | 36808859 | 36808542 | ID=Msa0598990-mRNA-1:cds;Parent=Msa0598990-mRNA-1 |
| chr4_2 | three_prime_UTR | 36808269 | 36808541 | 36808269 | ID=Msa0598990-mRNA-1:three_prime_utr;Parent=Msa0598990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
