Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0678630 | XP_024636900.1 | 100.000 | 113 | 0 | 0 | 1 | 113 | 1 | 113 | 1.35e-77 | 234 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0678630 | sp|O48650|SUI1_SALBA | 89.381 | 113 | 12 | 0 | 1 | 113 | 1 | 113 | 3.40e-73 | 216 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0678630 | A0A072UIY6 | 100.000 | 113 | 0 | 0 | 1 | 113 | 1 | 113 | 6.45e-78 | 234 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0678630 | Msa0714600 | 0.811147 | 8.096651e-51 | -8.615850e-47 |
| Msa0511720 | Msa0678630 | -0.806083 | 9.773089e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0678630 | MtrunA17_Chr4g0024171 | 100.000 | 113 | 0 | 0 | 1 | 113 | 1 | 113 | 1.24e-81 | 234 |
| Msa0678630 | MtrunA17_Chr2g0319561 | 87.719 | 114 | 13 | 1 | 1 | 113 | 1 | 114 | 2.90e-72 | 210 |
| Msa0678630 | MtrunA17_Chr3g0098971 | 71.681 | 113 | 31 | 1 | 1 | 113 | 1 | 112 | 4.46e-58 | 174 |
| Msa0678630 | MtrunA17_Chr5g0444201 | 72.477 | 109 | 29 | 1 | 5 | 113 | 3 | 110 | 2.45e-56 | 170 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0678630 | AT4G27130.1 | 85.841 | 113 | 16 | 0 | 1 | 113 | 1 | 113 | 2.47e-72 | 211 |
| Msa0678630 | AT5G54760.2 | 84.956 | 113 | 17 | 0 | 1 | 113 | 1 | 113 | 1.37e-71 | 209 |
| Msa0678630 | AT5G54760.4 | 84.956 | 113 | 17 | 0 | 1 | 113 | 1 | 113 | 1.37e-71 | 209 |
| Msa0678630 | AT5G54760.3 | 84.956 | 113 | 17 | 0 | 1 | 113 | 1 | 113 | 1.37e-71 | 209 |
| Msa0678630 | AT5G54760.1 | 84.956 | 113 | 17 | 0 | 1 | 113 | 1 | 113 | 1.37e-71 | 209 |
| Msa0678630 | AT1G54290.1 | 84.956 | 113 | 17 | 0 | 1 | 113 | 1 | 113 | 2.76e-71 | 208 |
| Msa0678630 | AT5G54940.1 | 69.912 | 113 | 33 | 1 | 1 | 113 | 1 | 112 | 9.14e-57 | 171 |
| Msa0678630 | AT5G54940.3 | 69.912 | 113 | 33 | 1 | 1 | 113 | 1 | 112 | 9.14e-57 | 171 |
| Msa0678630 | AT5G54940.2 | 69.912 | 113 | 33 | 1 | 1 | 113 | 1 | 112 | 9.14e-57 | 171 |
Find 62 sgRNAs with CRISPR-Local
Find 637 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAATATATTCTACATATTT+TGG | 0.128875 | 4_4:+34697105 | Msa0678630:three_prime_UTR |
| CGAAGTAAACAATTAAATCT+TGG | 0.316551 | 4_4:-34697274 | None:intergenic |
| GATGCAGGTCATACAACTTC+AGG | 0.332840 | 4_4:+34696789 | Msa0678630:intron |
| ACAAACATCCCAACAACTTA+TGG | 0.339557 | 4_4:+34695758 | Msa0678630:CDS |
| TCTTCCTCTTCCCAAGAATC+AGG | 0.342164 | 4_4:+34688816 | Msa0678630:five_prime_UTR |
| TGTATTTATAGTGGGAGAAT+TGG | 0.350831 | 4_4:-34688702 | None:intergenic |
| ATTCAAGGTATCTGTCTTAG+AGG | 0.351642 | 4_4:-34697166 | None:intergenic |
| GTATGTATGTGAGAGAAAAT+TGG | 0.362507 | 4_4:-34688755 | None:intergenic |
| AAGGAGAAAATCAAGCTTCA+TGG | 0.369453 | 4_4:+34696957 | Msa0678630:CDS |
| TACAGCAGAACTCTTTCTTC+AGG | 0.386347 | 4_4:-34696006 | None:intergenic |
| GAAGTAAACAATTAAATCTT+GGG | 0.391180 | 4_4:-34697273 | None:intergenic |
| AAAAGCTTAACAACTGTTCA+AGG | 0.396107 | 4_4:+34695944 | Msa0678630:CDS |
| TAGTGATGATACCTGATTCT+TGG | 0.402683 | 4_4:-34688827 | None:intergenic |
| GTCAAAAGTTGTGCATTTCA+AGG | 0.409860 | 4_4:-34697239 | None:intergenic |
| ACAAAGCAATCAGGCATGAA+TGG | 0.413282 | 4_4:-34697209 | None:intergenic |
| TATTCTTTGCCAGTGCTTAG+TGG | 0.415086 | 4_4:+34695668 | Msa0678630:intron |
| TGTTTCTACTTTCCTTGTGC+AGG | 0.434272 | 4_4:+34696828 | Msa0678630:CDS |
| AGTGATGATACCTGATTCTT+GGG | 0.439110 | 4_4:-34688826 | None:intergenic |
| AACACTCACCATAAGTTGTT+GGG | 0.442957 | 4_4:-34695766 | None:intergenic |
| AATGCTGAGGACTCAGGTGC+GGG | 0.445656 | 4_4:+34695875 | Msa0678630:CDS |
| CAACACTCACCATAAGTTGT+TGG | 0.449195 | 4_4:-34695767 | None:intergenic |
| CGAGGACCCTGAGTTGGGAC+AGG | 0.452119 | 4_4:+34696042 | Msa0678630:CDS |
| AATTACGACAAATTTATTCA+AGG | 0.452623 | 4_4:-34697181 | None:intergenic |
| TATGTATGTGAGAGAAAATT+GGG | 0.453198 | 4_4:-34688754 | None:intergenic |
| AAGAAAGAGTTCTGCTGTAA+TGG | 0.461657 | 4_4:+34696010 | Msa0678630:CDS |
| CAAGCTTCATGGTTTCTAAG+AGG | 0.476703 | 4_4:+34696968 | Msa0678630:exon |
| GTATTTGCTAGGTTATGATA+AGG | 0.491807 | 4_4:+34697132 | Msa0678630:three_prime_UTR |
| AGACAAACCTGTCCCAACTC+AGG | 0.502754 | 4_4:-34696049 | None:intergenic |
| GGACACAACACAAAGCAATC+AGG | 0.507988 | 4_4:-34697218 | None:intergenic |
| CAAAGCAATCAGGCATGAAT+GGG | 0.508320 | 4_4:-34697208 | None:intergenic |
| TGAAATGAAATGAAAGTTGA+AGG | 0.510464 | 4_4:-34688780 | None:intergenic |
| GTTGTCGAGGACCCTGAGTT+GGG | 0.512004 | 4_4:+34696037 | Msa0678630:CDS |
| GATACCTGATTCTTGGGAAG+AGG | 0.520029 | 4_4:-34688820 | None:intergenic |
| TCAGCATTTGCCTCAGCAAA+GGG | 0.521093 | 4_4:-34695860 | None:intergenic |
| TCAAACTCAGACATGAAACT+TGG | 0.526543 | 4_4:-34695734 | None:intergenic |
| CTCAGCATTTGCCTCAGCAA+AGG | 0.534120 | 4_4:-34695861 | None:intergenic |
| TTCCGTTACGCTGCTGTACA+CGG | 0.549366 | 4_4:-34695919 | None:intergenic |
| ATGCAGGTCATACAACTTCA+GGG | 0.552089 | 4_4:+34696790 | Msa0678630:intron |
| TGTTGTCGAGGACCCTGAGT+TGG | 0.552240 | 4_4:+34696036 | Msa0678630:CDS |
| GTCCGTGTACAGCAGCGTAA+CGG | 0.553561 | 4_4:+34695917 | Msa0678630:CDS |
| ATAGCAACATCTTATAGTCA+AGG | 0.558803 | 4_4:+34697075 | Msa0678630:three_prime_UTR |
| GAGGCAAATGCTGAGGACTC+AGG | 0.559971 | 4_4:+34695869 | Msa0678630:CDS |
| GTAGCTAAATTGCACACTGT+TGG | 0.564899 | 4_4:-34696993 | None:intergenic |
| TCAGACATGAAACTTGGCCT+TGG | 0.568130 | 4_4:-34695728 | None:intergenic |
| TAGCAACATCTTATAGTCAA+GGG | 0.574169 | 4_4:+34697076 | Msa0678630:three_prime_UTR |
| TTTAATTGTTTACTTCGTTG+AGG | 0.576048 | 4_4:+34697280 | Msa0678630:three_prime_UTR |
| TAGTGGTTGATTACATCAGA+AGG | 0.588836 | 4_4:+34695685 | Msa0678630:five_prime_UTR |
| AAAGCTTAACAACTGTTCAA+GGG | 0.593850 | 4_4:+34695945 | Msa0678630:CDS |
| ACAGGCGGGAATTGTAAAGA+AGG | 0.600946 | 4_4:+34696938 | Msa0678630:intron |
| AAATGCTGAGGACTCAGGTG+CGG | 0.603323 | 4_4:+34695874 | Msa0678630:CDS |
| GACAAACCTGTCCCAACTCA+GGG | 0.603811 | 4_4:-34696048 | None:intergenic |
| GTGTACAGCAGCGTAACGGA+AGG | 0.614404 | 4_4:+34695921 | Msa0678630:CDS |
| TACAACTTCAGGGAGATCAA+AGG | 0.622019 | 4_4:+34696800 | Msa0678630:CDS |
| TCATTTATCACAAGTTACCA+AGG | 0.626432 | 4_4:+34695711 | Msa0678630:five_prime_UTR |
| CTGTAATGGTACTGTTGTCG+AGG | 0.627538 | 4_4:+34696024 | Msa0678630:CDS |
| TAGCTATAGCAAGATACTCA+AGG | 0.629771 | 4_4:+34695982 | Msa0678630:CDS |
| ATGCTGAGGACTCAGGTGCG+GGG | 0.631800 | 4_4:+34695876 | Msa0678630:CDS |
| ATGTGAGAGAAAATTGGGAA+CGG | 0.632036 | 4_4:-34688749 | None:intergenic |
| TTGACTAGATCCCTTTGCTG+AGG | 0.638182 | 4_4:+34695850 | Msa0678630:intron |
| CTTTGCTGAGGCAAATGCTG+AGG | 0.642545 | 4_4:+34695862 | Msa0678630:CDS |
| GAAATGAAATGAAAGTTGAA+GGG | 0.643816 | 4_4:-34688779 | None:intergenic |
| ACATAATGCTTACCTGCACA+AGG | 0.656177 | 4_4:-34696840 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTATTATATAGAAAACT+GGG | - | chr4_4:34688981-34689000 | None:intergenic | 10.0% |
| !! | TCTATATAATAATTACATTT+AGG | + | chr4_4:34688986-34689005 | Msa0678630:intron | 10.0% |
| !!! | ATATATATTAATGATTTGTT+GGG | - | chr4_4:34689218-34689237 | None:intergenic | 10.0% |
| !!! | AATATATATTAATGATTTGT+TGG | - | chr4_4:34689219-34689238 | None:intergenic | 10.0% |
| !! | TTAGTAATTTCAAATATATA+AGG | + | chr4_4:34690064-34690083 | Msa0678630:intron | 10.0% |
| !! | CATAATATCATAAATTATTA+AGG | - | chr4_4:34690145-34690164 | None:intergenic | 10.0% |
| !! | ATAGTTTATATAAAATACTA+AGG | - | chr4_4:34690211-34690230 | None:intergenic | 10.0% |
| !! | TTAAAAATGTTTATAAATGA+TGG | - | chr4_4:34696486-34696505 | None:intergenic | 10.0% |
| !!! | ATAATATATTCTACATATTT+TGG | + | chr4_4:34697105-34697124 | Msa0678630:three_prime_UTR | 10.0% |
| !!! | TATTTTGTTGTATTTATAGT+GGG | - | chr4_4:34688713-34688732 | None:intergenic | 15.0% |
| !!! | TTATTTTGTTGTATTTATAG+TGG | - | chr4_4:34688714-34688733 | None:intergenic | 15.0% |
| !! | GTAATTATTATATAGAAAAC+TGG | - | chr4_4:34688982-34689001 | None:intergenic | 15.0% |
| !! | AATTAAGTTCAATCATAATT+AGG | + | chr4_4:34689429-34689448 | Msa0678630:intron | 15.0% |
| !! | ATTAAGTTCAATCATAATTA+GGG | + | chr4_4:34689430-34689449 | Msa0678630:intron | 15.0% |
| !!! | TTAAGATGAAGAAATTTTTT+CGG | - | chr4_4:34689739-34689758 | None:intergenic | 15.0% |
| !! | TATAAATAAAGATATGTAAG+AGG | + | chr4_4:34689803-34689822 | Msa0678630:intron | 15.0% |
| !!! | TTTTGTTGATTTTATAAAAG+TGG | - | chr4_4:34689863-34689882 | None:intergenic | 15.0% |
| !!! | GAAATTGATTTTAATTTTCA+GGG | - | chr4_4:34689945-34689964 | None:intergenic | 15.0% |
| !!! | TGAAATTGATTTTAATTTTC+AGG | - | chr4_4:34689946-34689965 | None:intergenic | 15.0% |
| !!! | TAAAAATAAAAAGTGTGTTA+TGG | + | chr4_4:34690637-34690656 | Msa0678630:intron | 15.0% |
| !!! | AAAAATAAAAAGTGTGTTAT+GGG | + | chr4_4:34690638-34690657 | Msa0678630:intron | 15.0% |
| !! | TGGGTATAAAAAAATTAATT+GGG | + | chr4_4:34690662-34690681 | Msa0678630:intron | 15.0% |
| !! | TTTATGATACTTAACTTAAA+AGG | - | chr4_4:34690748-34690767 | None:intergenic | 15.0% |
| !! | CAACATAAAAATAAAAAACT+GGG | - | chr4_4:34690934-34690953 | None:intergenic | 15.0% |
| !!! | TTTCTATTTATTTTGATTTG+TGG | + | chr4_4:34691076-34691095 | Msa0678630:intron | 15.0% |
| !!! | TTCTCAAATATTTTTGTTTT+TGG | + | chr4_4:34691208-34691227 | Msa0678630:intron | 15.0% |
| !!! | TCTCAAATATTTTTGTTTTT+GGG | + | chr4_4:34691209-34691228 | Msa0678630:intron | 15.0% |
| !!! | ATTATTCTTTTATTGTTGTT+TGG | + | chr4_4:34691550-34691569 | Msa0678630:intron | 15.0% |
| !!! | TTATTCTTTTATTGTTGTTT+GGG | + | chr4_4:34691551-34691570 | Msa0678630:intron | 15.0% |
| !!! | ATCAATTTAAAATATTTCCT+AGG | + | chr4_4:34691624-34691643 | Msa0678630:intron | 15.0% |
| !!! | TCAATTTAAAATATTTCCTA+GGG | + | chr4_4:34691625-34691644 | Msa0678630:intron | 15.0% |
| !!! | ATTATTCTTTTATTGTTGTT+TGG | + | chr4_4:34691550-34691569 | Msa0678630:intron | 15.0% |
| !!! | TTATTCTTTTATTGTTGTTT+GGG | + | chr4_4:34691551-34691570 | Msa0678630:intron | 15.0% |
| !! | CTAAATCTACTATATTTAAA+TGG | + | chr4_4:34691857-34691876 | Msa0678630:intron | 15.0% |
| !! | TACTATATTTAAATGGAAAA+AGG | + | chr4_4:34691864-34691883 | Msa0678630:intron | 15.0% |
| !!! | TCTTTATTTGTATATAAAAG+GGG | - | chr4_4:34692641-34692660 | None:intergenic | 15.0% |
| !!! | CTCTTTATTTGTATATAAAA+GGG | - | chr4_4:34692642-34692661 | None:intergenic | 15.0% |
| !!! | TCTCTTTATTTGTATATAAA+AGG | - | chr4_4:34692643-34692662 | None:intergenic | 15.0% |
| !! | TTAATATTGATGAGAAAAAT+AGG | + | chr4_4:34694139-34694158 | Msa0678630:intron | 15.0% |
| !! | TAATATTGATGAGAAAAATA+GGG | + | chr4_4:34694140-34694159 | Msa0678630:intron | 15.0% |
| !!! | TTATTTAAAATTCCTAGATA+TGG | + | chr4_4:34694194-34694213 | Msa0678630:intron | 15.0% |
| !!! | AATTTTATTCAAAACCAAAT+CGG | - | chr4_4:34694220-34694239 | None:intergenic | 15.0% |
| !!! | TTTGGTTTTGAATAAAATTT+AGG | + | chr4_4:34694221-34694240 | Msa0678630:intron | 15.0% |
| !!! | TTGGTTTTGAATAAAATTTA+GGG | + | chr4_4:34694222-34694241 | Msa0678630:intron | 15.0% |
| !!! | TCTTTATTTGTATATAAAAG+GGG | - | chr4_4:34692641-34692660 | None:intergenic | 15.0% |
| !!! | CTCTTTATTTGTATATAAAA+GGG | - | chr4_4:34692642-34692661 | None:intergenic | 15.0% |
| !!! | TCTCTTTATTTGTATATAAA+AGG | - | chr4_4:34692643-34692662 | None:intergenic | 15.0% |
| !!! | AACAAATTTTTATTATACAG+AGG | - | chr4_4:34695267-34695286 | None:intergenic | 15.0% |
| !!! | TCATTTTATTTACAATCAAA+AGG | + | chr4_4:34696182-34696201 | Msa0678630:intron | 15.0% |
| !!! | GATTTTTACCATAAAATAAA+TGG | - | chr4_4:34696374-34696393 | None:intergenic | 15.0% |
| !!! | AAATCTTAGTCTTATAATTT+AGG | + | chr4_4:34696415-34696434 | Msa0678630:intron | 15.0% |
| !! | CACAAAATATTAGATTACTA+CGG | + | chr4_4:34689774-34689793 | Msa0678630:intron | 20.0% |
| !! | TATATAAAATACTAAGGTCA+AGG | - | chr4_4:34690205-34690224 | None:intergenic | 20.0% |
| !! | AAATTGTTTAGTGTATGATT+TGG | - | chr4_4:34690316-34690335 | None:intergenic | 20.0% |
| !!! | CACTTTTTATTTTTAGTATC+AGG | - | chr4_4:34690632-34690651 | None:intergenic | 20.0% |
| !! | CTGGGTATAAAAAAATTAAT+TGG | + | chr4_4:34690661-34690680 | Msa0678630:intron | 20.0% |
| !! | CCAACATAAAAATAAAAAAC+TGG | - | chr4_4:34690935-34690954 | None:intergenic | 20.0% |
| !!! | CCAGTTTTTTATTTTTATGT+TGG | + | chr4_4:34690932-34690951 | Msa0678630:intron | 20.0% |
| !!! | TGTGAATCTTTAGAAAAAAT+TGG | + | chr4_4:34691045-34691064 | Msa0678630:intron | 20.0% |
| !!! | GTGAATCTTTAGAAAAAATT+GGG | + | chr4_4:34691046-34691065 | Msa0678630:intron | 20.0% |
| !!! | AATATTTTTGTTTTTGGGTT+TGG | + | chr4_4:34691214-34691233 | Msa0678630:intron | 20.0% |
| !!! | ATATTTTTGTTTTTGGGTTT+GGG | + | chr4_4:34691215-34691234 | Msa0678630:intron | 20.0% |
| !! | ACTTAAAAGTTCATTCAAAT+GGG | - | chr4_4:34691314-34691333 | None:intergenic | 20.0% |
| !! | AACTTAAAAGTTCATTCAAA+TGG | - | chr4_4:34691315-34691334 | None:intergenic | 20.0% |
| !! | AAAGAATAATACTAATGAGT+CGG | - | chr4_4:34691540-34691559 | None:intergenic | 20.0% |
| !! | AAAGAATAATACTAATGAGT+CGG | - | chr4_4:34691540-34691559 | None:intergenic | 20.0% |
| !! | TATCTAGTATTTAACTCTAA+TGG | + | chr4_4:34692672-34692691 | Msa0678630:intron | 20.0% |
| !! | ATCTAGTATTTAACTCTAAT+GGG | + | chr4_4:34692673-34692692 | Msa0678630:intron | 20.0% |
| !! | CTCTTATTATTTAATCCTAA+CGG | + | chr4_4:34692697-34692716 | Msa0678630:intron | 20.0% |
| !! | TCTTATTATTTAATCCTAAC+GGG | + | chr4_4:34692698-34692717 | Msa0678630:intron | 20.0% |
| !! | TTAAGTAGATTATTAGTAAG+TGG | - | chr4_4:34692724-34692743 | None:intergenic | 20.0% |
| !! | TAATTAGTAGGTAGTTAATT+AGG | - | chr4_4:34692748-34692767 | None:intergenic | 20.0% |
| !! | AGAAATCTTGGAAAAAATAT+AGG | + | chr4_4:34694077-34694096 | Msa0678630:intron | 20.0% |
| !! | GAAATCTTGGAAAAAATATA+GGG | + | chr4_4:34694078-34694097 | Msa0678630:intron | 20.0% |
| !! | AAATCTTGGAAAAAATATAG+GGG | + | chr4_4:34694079-34694098 | Msa0678630:intron | 20.0% |
| !! | TTGAGAAAAAAATAGGTATT+CGG | + | chr4_4:34694303-34694322 | Msa0678630:intron | 20.0% |
| !! | TATCTAGTATTTAACTCTAA+TGG | + | chr4_4:34692672-34692691 | Msa0678630:intron | 20.0% |
| !! | ATCTAGTATTTAACTCTAAT+GGG | + | chr4_4:34692673-34692692 | Msa0678630:intron | 20.0% |
| !! | CTCTTATTATTTAATCCTAA+CGG | + | chr4_4:34692697-34692716 | Msa0678630:intron | 20.0% |
| !! | TCTTATTATTTAATCCTAAC+GGG | + | chr4_4:34692698-34692717 | Msa0678630:intron | 20.0% |
| !! | TTAAGTAGATTATTAGTAAG+TGG | - | chr4_4:34692724-34692743 | None:intergenic | 20.0% |
| !! | TAATTAGTAGGTAGTTAATT+AGG | - | chr4_4:34692748-34692767 | None:intergenic | 20.0% |
| !! | AATTTGCATATATATGAACT+GGG | - | chr4_4:34695572-34695591 | None:intergenic | 20.0% |
| !! | AAAGGAAATAAAAATTCCAT+TGG | - | chr4_4:34696217-34696236 | None:intergenic | 20.0% |
| !!! | AATTTTTATTTCCTTTCTCA+GGG | + | chr4_4:34696221-34696240 | Msa0678630:intron | 20.0% |
| !! | TTTAGTTAAAAGTGAGTTTA+AGG | + | chr4_4:34696306-34696325 | Msa0678630:intron | 20.0% |
| !!! | AGTATCTTAAGTTATTTCTT+AGG | - | chr4_4:34696567-34696586 | None:intergenic | 20.0% |
| !! | AATGAGAAGAAATTATGTAT+AGG | - | chr4_4:34696735-34696754 | None:intergenic | 20.0% |
| !! | CCATTAAATAATAGAACATT+AGG | - | chr4_4:34696883-34696902 | None:intergenic | 20.0% |
| !! | CCTAATGTTCTATTATTTAA+TGG | + | chr4_4:34696880-34696899 | Msa0678630:intron | 20.0% |
| !!! | ATATTCTACATATTTTGGAT+CGG | + | chr4_4:34697110-34697129 | Msa0678630:three_prime_UTR | 20.0% |
| !! | AATTACGACAAATTTATTCA+AGG | - | chr4_4:34697184-34697203 | None:intergenic | 20.0% |
| !! | GAAGTAAACAATTAAATCTT+GGG | - | chr4_4:34697276-34697295 | None:intergenic | 20.0% |
| ! | TATGTATGTGAGAGAAAATT+GGG | - | chr4_4:34688757-34688776 | None:intergenic | 25.0% |
| ! | GAAATGAAATGAAAGTTGAA+GGG | - | chr4_4:34688782-34688801 | None:intergenic | 25.0% |
| ! | TGAAATGAAATGAAAGTTGA+AGG | - | chr4_4:34688783-34688802 | None:intergenic | 25.0% |
| !!! | CTTTTTTATTTTCACTTTGC+TGG | + | chr4_4:34689024-34689043 | Msa0678630:intron | 25.0% |
| ! | ATTGAGGTTTCTATTGTTAA+TGG | + | chr4_4:34689050-34689069 | Msa0678630:intron | 25.0% |
| !!! | AATGGTTTTGTGAGAAAAAT+TGG | + | chr4_4:34689068-34689087 | Msa0678630:intron | 25.0% |
| ! | TTGTGAGAAAAATTGGAATT+TGG | + | chr4_4:34689075-34689094 | Msa0678630:intron | 25.0% |
| ! | TGTGAGAAAAATTGGAATTT+GGG | + | chr4_4:34689076-34689095 | Msa0678630:intron | 25.0% |
| !!! | AATTTGCTATTTTAGTCTCT+AGG | + | chr4_4:34689131-34689150 | Msa0678630:intron | 25.0% |
| !!! | ATTTAATTTGTATGCATCGA+CGG | + | chr4_4:34689259-34689278 | Msa0678630:intron | 25.0% |
| ! | TATATGTAGCGTAATTTGAT+TGG | + | chr4_4:34689368-34689387 | Msa0678630:intron | 25.0% |
| !! | TTTTCTTGAATTGAAATCCT+CGG | + | chr4_4:34689474-34689493 | Msa0678630:intron | 25.0% |
| !!! | TGATTTTAATTTTCAGGGTT+TGG | - | chr4_4:34689940-34689959 | None:intergenic | 25.0% |
| !! | CAAGAAAATGGTAATGAAAA+TGG | - | chr4_4:34690458-34690477 | None:intergenic | 25.0% |
| ! | GCATTAACATAACAAGAAAA+TGG | - | chr4_4:34690470-34690489 | None:intergenic | 25.0% |
| !! | GTTTTTCTTTCTTTCTTCTT+TGG | - | chr4_4:34690593-34690612 | None:intergenic | 25.0% |
| ! | AAGAAGAAAGAAAGAAAAAC+AGG | + | chr4_4:34690593-34690612 | Msa0678630:intron | 25.0% |
| !! | TTAAGGTTACAAACTTGTTT+AGG | - | chr4_4:34690875-34690894 | None:intergenic | 25.0% |
| ! | TCCACAAAATAAGAGATTTA+GGG | + | chr4_4:34690973-34690992 | Msa0678630:intron | 25.0% |
| ! | ACAAGGAATTCATCAAAATA+AGG | - | chr4_4:34691262-34691281 | None:intergenic | 25.0% |
| ! | TTAAATGGCGATTTATATTG+CGG | - | chr4_4:34691370-34691389 | None:intergenic | 25.0% |
| ! | AAGAATAATACTAATGAGTC+GGG | - | chr4_4:34691539-34691558 | None:intergenic | 25.0% |
| ! | TTAAAATATTTCCTAGGGTA+TGG | + | chr4_4:34691630-34691649 | Msa0678630:intron | 25.0% |
| ! | TAAAATATTTCCTAGGGTAT+GGG | + | chr4_4:34691631-34691650 | Msa0678630:intron | 25.0% |
| ! | AAGAATAATACTAATGAGTC+GGG | - | chr4_4:34691539-34691558 | None:intergenic | 25.0% |
| !!! | GTGCAATATTAAGTTTTAGT+AGG | + | chr4_4:34691910-34691929 | Msa0678630:intron | 25.0% |
| ! | CTTCAATTGCTTATTATACA+TGG | - | chr4_4:34692257-34692276 | None:intergenic | 25.0% |
| !! | CAGTATAATTTAAGATTGGT+AGG | + | chr4_4:34692329-34692348 | Msa0678630:intron | 25.0% |
| !! | TACAATCTTTTACTCTTGAT+AGG | + | chr4_4:34692381-34692400 | Msa0678630:intron | 25.0% |
| ! | TATATAAAAGGGGAATTCTT+AGG | - | chr4_4:34692631-34692650 | None:intergenic | 25.0% |
| ! | CGTTAGGATTAAATAATAAG+AGG | - | chr4_4:34692699-34692718 | None:intergenic | 25.0% |
| !!! | TGGTGTTTTAAGTAATTAGT+AGG | - | chr4_4:34692760-34692779 | None:intergenic | 25.0% |
| ! | TTAAACAATAGATTGTTGTC+CGG | + | chr4_4:34692927-34692946 | Msa0678630:intron | 25.0% |
| ! | TCCTTAAACTCATGATTATT+TGG | + | chr4_4:34693539-34693558 | Msa0678630:intron | 25.0% |
| ! | CCTTAAACTCATGATTATTT+GGG | + | chr4_4:34693540-34693559 | Msa0678630:intron | 25.0% |
| !!! | AAATTGGTACTGTTTTGTTT+AGG | + | chr4_4:34693932-34693951 | Msa0678630:intron | 25.0% |
| !!! | AATTGGTACTGTTTTGTTTA+GGG | + | chr4_4:34693933-34693952 | Msa0678630:intron | 25.0% |
| !!! | TACAGTAATGTTGTTTTGTT+TGG | + | chr4_4:34693958-34693977 | Msa0678630:intron | 25.0% |
| !!! | ACAGTAATGTTGTTTTGTTT+GGG | + | chr4_4:34693959-34693978 | Msa0678630:intron | 25.0% |
| !!! | ATTTTTGAGGAAAGATAAGA+AGG | + | chr4_4:34694039-34694058 | Msa0678630:intron | 25.0% |
| !!! | TTTTTGAGGAAAGATAAGAA+GGG | + | chr4_4:34694040-34694059 | Msa0678630:intron | 25.0% |
| !!! | GTTATTTTGGAAAGAAATCT+TGG | + | chr4_4:34694065-34694084 | Msa0678630:intron | 25.0% |
| !!! | TCTGTTGTTTCAGAAATATA+AGG | + | chr4_4:34694165-34694184 | Msa0678630:intron | 25.0% |
| !!! | AAGATAGGTTTTTAGTTTTG+TGG | + | chr4_4:34694251-34694270 | Msa0678630:intron | 25.0% |
| !!! | TTGCTGTTTGAGAAAAAAAT+AGG | + | chr4_4:34694296-34694315 | Msa0678630:intron | 25.0% |
| !! | TATGTCAAATTTTCTGGATA+TGG | + | chr4_4:34694327-34694346 | Msa0678630:intron | 25.0% |
| ! | TATATAAAAGGGGAATTCTT+AGG | - | chr4_4:34692631-34692650 | None:intergenic | 25.0% |
| ! | CGTTAGGATTAAATAATAAG+AGG | - | chr4_4:34692699-34692718 | None:intergenic | 25.0% |
| !!! | TGGTGTTTTAAGTAATTAGT+AGG | - | chr4_4:34692760-34692779 | None:intergenic | 25.0% |
| ! | TTTCTAACAGAAATAACATG+AGG | - | chr4_4:34694961-34694980 | None:intergenic | 25.0% |
| !!! | TATGTTATGCTTTTAGAAGT+AGG | - | chr4_4:34695002-34695021 | None:intergenic | 25.0% |
| !!! | TGCTATCTAGTTTATCATTT+TGG | + | chr4_4:34695083-34695102 | Msa0678630:intron | 25.0% |
| ! | CAATTGCACTACAAAAAAAT+AGG | - | chr4_4:34695303-34695322 | None:intergenic | 25.0% |
| ! | CAATTGCACTTCAAAAAATT+AGG | - | chr4_4:34695426-34695445 | None:intergenic | 25.0% |
| ! | CAATTTGCAAATATATGAAC+AGG | - | chr4_4:34695463-34695482 | None:intergenic | 25.0% |
| ! | AACTGGGATAATATAACAAT+TGG | - | chr4_4:34695556-34695575 | None:intergenic | 25.0% |
| ! | CAATTTGCATATATATGAAC+TGG | - | chr4_4:34695573-34695592 | None:intergenic | 25.0% |
| !! | ACAGATATAGAAATGTCTTT+TGG | + | chr4_4:34695614-34695633 | Msa0678630:intron | 25.0% |
| ! | TATCAAATATACTCAAGTCA+GGG | - | chr4_4:34695650-34695669 | None:intergenic | 25.0% |
| ! | ATATCAAATATACTCAAGTC+AGG | - | chr4_4:34695651-34695670 | None:intergenic | 25.0% |
| ! | ATTAGTACATTACTTGCATT+TGG | - | chr4_4:34696155-34696174 | None:intergenic | 25.0% |
| ! | CAAAAGGAAAAAAAATCCAA+TGG | + | chr4_4:34696198-34696217 | Msa0678630:intron | 25.0% |
| !!! | GAATTTTTATTTCCTTTCTC+AGG | + | chr4_4:34696220-34696239 | Msa0678630:intron | 25.0% |
| ! | AAGGTAAAATGATTTATGAG+TGG | + | chr4_4:34696325-34696344 | Msa0678630:intron | 25.0% |
| ! | AAAATAAATGGTTCATCTCA+CGG | - | chr4_4:34696362-34696381 | None:intergenic | 25.0% |
| !!! | GAGATGAACCATTTATTTTA+TGG | + | chr4_4:34696363-34696382 | Msa0678630:intron | 25.0% |
| ! | CTTGAATATTGAAATCAACT+TGG | + | chr4_4:34696643-34696662 | Msa0678630:intron | 25.0% |
| ! | TCCATAAAAAATAGGCAATT+AGG | - | chr4_4:34696771-34696790 | None:intergenic | 25.0% |
| !! | TTTTCTATGATGTTTGTAAC+AGG | + | chr4_4:34696920-34696939 | Msa0678630:intron | 25.0% |
| ! | CGAAGTAAACAATTAAATCT+TGG | - | chr4_4:34697277-34697296 | None:intergenic | 25.0% |
| ! | TTTAATTGTTTACTTCGTTG+AGG | + | chr4_4:34697280-34697299 | Msa0678630:three_prime_UTR | 25.0% |
| ! | TGTATTTATAGTGGGAGAAT+TGG | - | chr4_4:34688705-34688724 | None:intergenic | 30.0% |
| GTATGTATGTGAGAGAAAAT+TGG | - | chr4_4:34688758-34688777 | None:intergenic | 30.0% | |
| GAAAATCATCGTTCCTAATA+AGG | - | chr4_4:34688951-34688970 | None:intergenic | 30.0% | |
| !! | TTGTTGTGAATTTGTTGTGT+AGG | + | chr4_4:34689185-34689204 | Msa0678630:intron | 30.0% |
| TATTGTTCCAATCCAAAAGT+TGG | + | chr4_4:34689553-34689572 | Msa0678630:intron | 30.0% | |
| !!! | AAATTTTTTCGGTTATGCCT+AGG | - | chr4_4:34689728-34689747 | None:intergenic | 30.0% |
| GTCCACAAAATAAGAGATTT+AGG | + | chr4_4:34690972-34690991 | Msa0678630:intron | 30.0% | |
| !!! | TCCCTAAATCTCTTATTTTG+TGG | - | chr4_4:34690977-34690996 | None:intergenic | 30.0% |
| !!! | GTCTCATTTCTTTAGCTTTT+AGG | + | chr4_4:34691104-34691123 | Msa0678630:intron | 30.0% |
| ! | TTCTTTGTGGTCAATTTGTT+GGG | + | chr4_4:34691154-34691173 | Msa0678630:intron | 30.0% |
| !! | TATTGCGGTTTTAACAACAT+TGG | - | chr4_4:34691355-34691374 | None:intergenic | 30.0% |
| GCATGATCTTGCAATTTAAA+TGG | - | chr4_4:34691385-34691404 | None:intergenic | 30.0% | |
| AAAATATTTCCTAGGGTATG+GGG | + | chr4_4:34691632-34691651 | Msa0678630:intron | 30.0% | |
| TTAGTAGGATCTTATGATCT+TGG | + | chr4_4:34691925-34691944 | Msa0678630:intron | 30.0% | |
| TCTACCCAAATGATTACATA+GGG | - | chr4_4:34691977-34691996 | None:intergenic | 30.0% | |
| TTCTACCCAAATGATTACAT+AGG | - | chr4_4:34691978-34691997 | None:intergenic | 30.0% | |
| ! | TTGTGTTACTGTTAATTCCT+TGG | - | chr4_4:34692422-34692441 | None:intergenic | 30.0% |
| AATTAACAGTAACACAACCA+AGG | + | chr4_4:34692425-34692444 | Msa0678630:intron | 30.0% | |
| ! | CAGATTGAGTTTTCTGTTTA+GGG | - | chr4_4:34692593-34692612 | None:intergenic | 30.0% |
| ! | ACAGATTGAGTTTTCTGTTT+AGG | - | chr4_4:34692594-34692613 | None:intergenic | 30.0% |
| GATAAGAAAGCTAACTCAAA+GGG | - | chr4_4:34693096-34693115 | None:intergenic | 30.0% | |
| AGATAAGAAAGCTAACTCAA+AGG | - | chr4_4:34693097-34693116 | None:intergenic | 30.0% | |
| TGAAGAAGGAAAGAAAACAA+AGG | - | chr4_4:34693127-34693146 | None:intergenic | 30.0% | |
| GTGATATCATGATGTTAGTT+GGG | - | chr4_4:34693157-34693176 | None:intergenic | 30.0% | |
| AGTGATATCATGATGTTAGT+TGG | - | chr4_4:34693158-34693177 | None:intergenic | 30.0% | |
| AAGTATGGAAATCCACAATT+GGG | - | chr4_4:34693443-34693462 | None:intergenic | 30.0% | |
| TAAGTATGGAAATCCACAAT+TGG | - | chr4_4:34693444-34693463 | None:intergenic | 30.0% | |
| CCCAAATAATCATGAGTTTA+AGG | - | chr4_4:34693543-34693562 | None:intergenic | 30.0% | |
| AAAACTCTAAATTCTGTTCC+TGG | + | chr4_4:34693620-34693639 | Msa0678630:intron | 30.0% | |
| TTCAACTGATAAGATGCAAT+GGG | - | chr4_4:34693786-34693805 | None:intergenic | 30.0% | |
| ATTCAACTGATAAGATGCAA+TGG | - | chr4_4:34693787-34693806 | None:intergenic | 30.0% | |
| ! | TTGAATGAATTTTCTCCCTA+AGG | + | chr4_4:34693801-34693820 | Msa0678630:intron | 30.0% |
| !! | TGCAGAATTGTTTTTCCTTA+GGG | - | chr4_4:34693819-34693838 | None:intergenic | 30.0% |
| !! | ATGCAGAATTGTTTTTCCTT+AGG | - | chr4_4:34693820-34693839 | None:intergenic | 30.0% |
| ! | CGTACAATTTTGTGAATGAA+GGG | - | chr4_4:34693886-34693905 | None:intergenic | 30.0% |
| ! | TCGTACAATTTTGTGAATGA+AGG | - | chr4_4:34693887-34693906 | None:intergenic | 30.0% |
| !!! | CAGTAATGTTGTTTTGTTTG+GGG | + | chr4_4:34693960-34693979 | Msa0678630:intron | 30.0% |
| !!! | GATAAGAAGGGTTGTTATTT+TGG | + | chr4_4:34694052-34694071 | Msa0678630:intron | 30.0% |
| AATTTAGGGAGAGAAAAGAT+AGG | + | chr4_4:34694236-34694255 | Msa0678630:intron | 30.0% | |
| !!! | GTTTTTAGTTTTGTGGTTTG+AGG | + | chr4_4:34694258-34694277 | Msa0678630:intron | 30.0% |
| ! | TTCGGTTATGTCAAATTTTC+TGG | + | chr4_4:34694321-34694340 | Msa0678630:intron | 30.0% |
| ! | TTGTGTTACTGTTAATTCCT+TGG | - | chr4_4:34692422-34692441 | None:intergenic | 30.0% |
| AATTAACAGTAACACAACCA+AGG | + | chr4_4:34692425-34692444 | Msa0678630:intron | 30.0% | |
| ! | CAGATTGAGTTTTCTGTTTA+GGG | - | chr4_4:34692593-34692612 | None:intergenic | 30.0% |
| ! | ACAGATTGAGTTTTCTGTTT+AGG | - | chr4_4:34692594-34692613 | None:intergenic | 30.0% |
| TGATATACTGCTTAAGATCT+GGG | - | chr4_4:34694881-34694900 | None:intergenic | 30.0% | |
| TTGATATACTGCTTAAGATC+TGG | - | chr4_4:34694882-34694901 | None:intergenic | 30.0% | |
| TCGTGTAGATATGAAATAGA+TGG | + | chr4_4:34694914-34694933 | Msa0678630:intron | 30.0% | |
| GTAGATATGAAATAGATGGA+TGG | + | chr4_4:34694918-34694937 | Msa0678630:intron | 30.0% | |
| GTTGAGTCTTGATAAATGTA+AGG | + | chr4_4:34695033-34695052 | Msa0678630:intron | 30.0% | |
| !! | TCTAGTTTATCATTTTGGAC+TGG | + | chr4_4:34695088-34695107 | Msa0678630:intron | 30.0% |
| !!! | TTTATCATTTTGGACTGGTA+GGG | + | chr4_4:34695093-34695112 | Msa0678630:intron | 30.0% |
| !!! | CACAGATTTTTAGTATACAG+AGG | - | chr4_4:34695391-34695410 | None:intergenic | 30.0% |
| ! | TTTTACCATACAGAGGAAAT+AGG | - | chr4_4:34695506-34695525 | None:intergenic | 30.0% |
| AATTGGACAGCAAAAAACAA+AGG | - | chr4_4:34695539-34695558 | None:intergenic | 30.0% | |
| TCATTTATCACAAGTTACCA+AGG | + | chr4_4:34695711-34695730 | Msa0678630:five_prime_UTR | 30.0% | |
| AAAAGCTTAACAACTGTTCA+AGG | + | chr4_4:34695944-34695963 | Msa0678630:CDS | 30.0% | |
| AAAGCTTAACAACTGTTCAA+GGG | + | chr4_4:34695945-34695964 | Msa0678630:CDS | 30.0% | |
| AAATCATTTCTCATCCAATG+TGG | + | chr4_4:34696504-34696523 | Msa0678630:intron | 30.0% | |
| !!! | GCCTAATTGCCTATTTTTTA+TGG | + | chr4_4:34696767-34696786 | Msa0678630:intron | 30.0% |
| ACATTAGGCACATTATAATC+AGG | - | chr4_4:34696868-34696887 | None:intergenic | 30.0% | |
| ATAGCAACATCTTATAGTCA+AGG | + | chr4_4:34697075-34697094 | Msa0678630:three_prime_UTR | 30.0% | |
| TAGCAACATCTTATAGTCAA+GGG | + | chr4_4:34697076-34697095 | Msa0678630:three_prime_UTR | 30.0% | |
| ! | GTATTTGCTAGGTTATGATA+AGG | + | chr4_4:34697132-34697151 | Msa0678630:three_prime_UTR | 30.0% |
| ATGTGAGAGAAAATTGGGAA+CGG | - | chr4_4:34688752-34688771 | None:intergenic | 35.0% | |
| AGTGATGATACCTGATTCTT+GGG | - | chr4_4:34688829-34688848 | None:intergenic | 35.0% | |
| TAGTGATGATACCTGATTCT+TGG | - | chr4_4:34688830-34688849 | None:intergenic | 35.0% | |
| TTTCTCTCGAATTCGTATCA+AGG | + | chr4_4:34688916-34688935 | Msa0678630:intron | 35.0% | |
| TCATCGTTCCTAATAAGGAT+CGG | - | chr4_4:34688946-34688965 | None:intergenic | 35.0% | |
| TTCACTTTGCTGGATAATTG+AGG | + | chr4_4:34689034-34689053 | Msa0678630:intron | 35.0% | |
| !!! | CTATTTTAGTCTCTAGGTGA+AGG | + | chr4_4:34689137-34689156 | Msa0678630:intron | 35.0% |
| GCACTATAAAGTGAATTGGT+TGG | - | chr4_4:34689309-34689328 | None:intergenic | 35.0% | |
| AGTGGCACTATAAAGTGAAT+TGG | - | chr4_4:34689313-34689332 | None:intergenic | 35.0% | |
| !!! | CTTTATAGTGCCACTTTTGT+AGG | + | chr4_4:34689318-34689337 | Msa0678630:intron | 35.0% |
| TAAGAGCTATCCTACAAAAG+TGG | - | chr4_4:34689331-34689350 | None:intergenic | 35.0% | |
| ATGTAGCGTAATTTGATTGG+AGG | + | chr4_4:34689371-34689390 | Msa0678630:intron | 35.0% | |
| ATTAATAACTTGAGCCGAGT+AGG | + | chr4_4:34689512-34689531 | Msa0678630:intron | 35.0% | |
| !! | ATCTCTTAACTTGTCCTACT+CGG | - | chr4_4:34689529-34689548 | None:intergenic | 35.0% |
| ! | TACGAATCCAACTTTTGGAT+TGG | - | chr4_4:34689563-34689582 | None:intergenic | 35.0% |
| ATCTCTTGCAACTTAACCAT+AGG | - | chr4_4:34689593-34689612 | None:intergenic | 35.0% | |
| ACTACTACTAACTTTGTCCT+AGG | + | chr4_4:34689708-34689727 | Msa0678630:intron | 35.0% | |
| GCAGTAGCAAAACATATTGA+GGG | - | chr4_4:34690172-34690191 | None:intergenic | 35.0% | |
| !!! | GTTCACTTTTTCAATACCCA+AGG | + | chr4_4:34690284-34690303 | Msa0678630:intron | 35.0% |
| CTAAACAATTTCTAAGCTCC+TGG | + | chr4_4:34690325-34690344 | Msa0678630:intron | 35.0% | |
| TTGTTTGATGCATATGAACC+AGG | - | chr4_4:34690346-34690365 | None:intergenic | 35.0% | |
| ! | CAAATCTGATTCTAGAAGAG+AGG | + | chr4_4:34690500-34690519 | Msa0678630:intron | 35.0% |
| ! | ATAAAAAGTGTGTTATGGGC+TGG | + | chr4_4:34690642-34690661 | Msa0678630:intron | 35.0% |
| ! | TAAAAAGTGTGTTATGGGCT+GGG | + | chr4_4:34690643-34690662 | Msa0678630:intron | 35.0% |
| AACCTTAATCCGATTCTGAT+TGG | + | chr4_4:34690887-34690906 | Msa0678630:intron | 35.0% | |
| ACCTTAATCCGATTCTGATT+GGG | + | chr4_4:34690888-34690907 | Msa0678630:intron | 35.0% | |
| !!! | TTTCTTTAGCTTTTAGGCGA+AGG | + | chr4_4:34691110-34691129 | Msa0678630:intron | 35.0% |
| CTTCTTTGTGGTCAATTTGT+TGG | + | chr4_4:34691153-34691172 | Msa0678630:intron | 35.0% | |
| !!! | TTTGTTTTTGGGTTTGGGTT+TGG | + | chr4_4:34691220-34691239 | Msa0678630:intron | 35.0% |
| ATTGCGTCAACAAATCTACA+AGG | - | chr4_4:34691279-34691298 | None:intergenic | 35.0% | |
| CCTTCTTTGACATTTCACTA+CGG | - | chr4_4:34691443-34691462 | None:intergenic | 35.0% | |
| AGTGAAATGTCAAAGAAGGA+TGG | + | chr4_4:34691444-34691463 | Msa0678630:intron | 35.0% | |
| TTTCATTTCTGTTGCGAGAA+GGG | + | chr4_4:34691496-34691515 | Msa0678630:intron | 35.0% | |
| CCAAATGATTACATAGGGTT+GGG | - | chr4_4:34691972-34691991 | None:intergenic | 35.0% | |
| CCAACCCTATGTAATCATTT+GGG | + | chr4_4:34691970-34691989 | Msa0678630:intron | 35.0% | |
| ATCGAGATCTTGACTAAGAT+CGG | - | chr4_4:34692052-34692071 | None:intergenic | 35.0% | |
| ACTGAGATCATGAAGTTGAA+GGG | + | chr4_4:34692183-34692202 | Msa0678630:intron | 35.0% | |
| ! | GCGGCAGTATAATTTAAGAT+TGG | + | chr4_4:34692325-34692344 | Msa0678630:intron | 35.0% |
| GAGTAAAAGATTGTAACTCG+AGG | - | chr4_4:34692376-34692395 | None:intergenic | 35.0% | |
| GTTACTGTTAATTCCTTGGT+AGG | - | chr4_4:34692418-34692437 | None:intergenic | 35.0% | |
| ATCTGTTTCATCTTCTTCCT+TGG | - | chr4_4:34692445-34692464 | None:intergenic | 35.0% | |
| AAGGAAGAAGATGAAACAGA+TGG | + | chr4_4:34692444-34692463 | Msa0678630:intron | 35.0% | |
| ! | GATGAAACAGATGGTAATGA+AGG | + | chr4_4:34692453-34692472 | Msa0678630:intron | 35.0% |
| CTTAAAACACCACCTCATAT+TGG | + | chr4_4:34692768-34692787 | Msa0678630:intron | 35.0% | |
| !!! | GACAAGTCTGTTTTTCAAGA+CGG | - | chr4_4:34692809-34692828 | None:intergenic | 35.0% |
| TAGTTCATCAAAGTCCCAAT+GGG | - | chr4_4:34692904-34692923 | None:intergenic | 35.0% | |
| ATTGTGGTCTATGCACATAT+GGG | - | chr4_4:34692976-34692995 | None:intergenic | 35.0% | |
| AATTGTGGTCTATGCACATA+TGG | - | chr4_4:34692977-34692996 | None:intergenic | 35.0% | |
| GGTCAAAGTTTGCAAAATTG+TGG | - | chr4_4:34692992-34693011 | None:intergenic | 35.0% | |
| ! | AGTTGGGAATATTCTGAAGA+AGG | - | chr4_4:34693141-34693160 | None:intergenic | 35.0% |
| AACGATCAAAAGTGAACCTA+CGG | - | chr4_4:34693231-34693250 | None:intergenic | 35.0% | |
| TGAGTTTAAGGATCAAAGAG+AGG | - | chr4_4:34693531-34693550 | None:intergenic | 35.0% | |
| ! | TGATTATTTGGGTTCTCTGA+TGG | + | chr4_4:34693551-34693570 | Msa0678630:intron | 35.0% |
| !! | TAGCTTTGATGGAGAGATTT+AGG | - | chr4_4:34693676-34693695 | None:intergenic | 35.0% |
| CAATGCTATGGTTTCAATCT+TGG | - | chr4_4:34693739-34693758 | None:intergenic | 35.0% | |
| TTTCAAAACAGTGTTCGAGA+TGG | - | chr4_4:34693915-34693934 | None:intergenic | 35.0% | |
| !!! | CTCGAACACTGTTTTGAAAT+TGG | + | chr4_4:34693916-34693935 | Msa0678630:intron | 35.0% |
| TCTTGGAAAAAATATAGGGG+AGG | + | chr4_4:34694082-34694101 | Msa0678630:intron | 35.0% | |
| CTTGGAAAAAATATAGGGGA+GGG | + | chr4_4:34694083-34694102 | Msa0678630:intron | 35.0% | |
| AAATATAGGGGAGGGATAAT+AGG | + | chr4_4:34694091-34694110 | Msa0678630:intron | 35.0% | |
| AGGAGCAGTTCAGATATATT+TGG | + | chr4_4:34694111-34694130 | Msa0678630:intron | 35.0% | |
| GGAGCAGTTCAGATATATTT+GGG | + | chr4_4:34694112-34694131 | Msa0678630:intron | 35.0% | |
| GAGCAGTTCAGATATATTTG+GGG | + | chr4_4:34694113-34694132 | Msa0678630:intron | 35.0% | |
| !!! | TTAGTTTTGTGGTTTGAGGA+AGG | + | chr4_4:34694262-34694281 | Msa0678630:intron | 35.0% |
| GATATGGCTTACTAGTCAAA+TGG | + | chr4_4:34694343-34694362 | Msa0678630:intron | 35.0% | |
| GCTTACTAGTCAAATGGAAA+GGG | + | chr4_4:34694349-34694368 | Msa0678630:intron | 35.0% | |
| !!! | TCTGACTGGTTTTGATTCTT+TGG | + | chr4_4:34694392-34694411 | Msa0678630:intron | 35.0% |
| !!! | CTGACTGGTTTTGATTCTTT+GGG | + | chr4_4:34694393-34694412 | Msa0678630:intron | 35.0% |
| GATTCTTTGGGTGACAAAAA+AGG | + | chr4_4:34694405-34694424 | Msa0678630:intron | 35.0% | |
| TGACAAAAAAGGAAAGACAG+TGG | + | chr4_4:34694416-34694435 | Msa0678630:intron | 35.0% | |
| !! | TCTGTTGGTTCCTATCAAAT+TGG | - | chr4_4:34694465-34694484 | None:intergenic | 35.0% |
| GTTACTGTTAATTCCTTGGT+AGG | - | chr4_4:34692418-34692437 | None:intergenic | 35.0% | |
| ATCTGTTTCATCTTCTTCCT+TGG | - | chr4_4:34692445-34692464 | None:intergenic | 35.0% | |
| AAGGAAGAAGATGAAACAGA+TGG | + | chr4_4:34692444-34692463 | Msa0678630:intron | 35.0% | |
| ! | GATGAAACAGATGGTAATGA+AGG | + | chr4_4:34692453-34692472 | Msa0678630:intron | 35.0% |
| CTTAAAACACCACCTCATAT+TGG | + | chr4_4:34692768-34692787 | Msa0678630:intron | 35.0% | |
| AGTTGTTAGGATCCAATATG+AGG | - | chr4_4:34694854-34694873 | None:intergenic | 35.0% | |
| ATATACTGCTTAAGATCTGG+GGG | - | chr4_4:34694879-34694898 | None:intergenic | 35.0% | |
| GATATACTGCTTAAGATCTG+GGG | - | chr4_4:34694880-34694899 | None:intergenic | 35.0% | |
| !!! | GTTTATCATTTTGGACTGGT+AGG | + | chr4_4:34695092-34695111 | Msa0678630:intron | 35.0% |
| GTTATGGAAGAGTCTAGAAA+AGG | + | chr4_4:34695147-34695166 | Msa0678630:intron | 35.0% | |
| !!! | CAGAGTTTTTTACCATACAG+AGG | - | chr4_4:34695513-34695532 | None:intergenic | 35.0% |
| TAGTGGTTGATTACATCAGA+AGG | + | chr4_4:34695685-34695704 | Msa0678630:five_prime_UTR | 35.0% | |
| TCAAACTCAGACATGAAACT+TGG | - | chr4_4:34695737-34695756 | None:intergenic | 35.0% | |
| ACAAACATCCCAACAACTTA+TGG | + | chr4_4:34695758-34695777 | Msa0678630:CDS | 35.0% | |
| AACACTCACCATAAGTTGTT+GGG | - | chr4_4:34695769-34695788 | None:intergenic | 35.0% | |
| !! | TGGTGAGTGTTGAATTTCTT+AGG | + | chr4_4:34695778-34695797 | Msa0678630:intron | 35.0% |
| TAGCTATAGCAAGATACTCA+AGG | + | chr4_4:34695982-34696001 | Msa0678630:CDS | 35.0% | |
| AAGAAAGAGTTCTGCTGTAA+TGG | + | chr4_4:34696010-34696029 | Msa0678630:CDS | 35.0% | |
| TTATTTCCTTTCTCAGGGTA+TGG | + | chr4_4:34696226-34696245 | Msa0678630:intron | 35.0% | |
| TGTGATTCAATGTGTGTGTT+TGG | + | chr4_4:34696263-34696282 | Msa0678630:intron | 35.0% | |
| !! | AATGTGTGTGTTTGGTTCTA+TGG | + | chr4_4:34696271-34696290 | Msa0678630:intron | 35.0% |
| ATGGTAAAAATCATGTTGCG+AGG | + | chr4_4:34696382-34696401 | Msa0678630:intron | 35.0% | |
| !!! | TACGTTTTAAGAGTCCACAT+TGG | - | chr4_4:34696521-34696540 | None:intergenic | 35.0% |
| !! | GCATGTTTGGATTCACTTTT+GGG | - | chr4_4:34696694-34696713 | None:intergenic | 35.0% |
| ! | TGCATGTTTGGATTCACTTT+TGG | - | chr4_4:34696695-34696714 | None:intergenic | 35.0% |
| ! | GAATCCAAACATGCATTGAT+TGG | + | chr4_4:34696700-34696719 | Msa0678630:intron | 35.0% |
| !!! | TGCCTATTTTTTATGGATGC+AGG | + | chr4_4:34696774-34696793 | Msa0678630:intron | 35.0% |
| GACCTGCATCCATAAAAAAT+AGG | - | chr4_4:34696779-34696798 | None:intergenic | 35.0% | |
| TCTATGATGTTTGTAACAGG+CGG | + | chr4_4:34696923-34696942 | Msa0678630:intron | 35.0% | |
| AAGGAGAAAATCAAGCTTCA+TGG | + | chr4_4:34696957-34696976 | Msa0678630:CDS | 35.0% | |
| ! | ATTTTGGATCGGTATTTGCT+AGG | + | chr4_4:34697121-34697140 | Msa0678630:three_prime_UTR | 35.0% |
| ! | ATTCAAGGTATCTGTCTTAG+AGG | - | chr4_4:34697169-34697188 | None:intergenic | 35.0% |
| GTCAAAAGTTGTGCATTTCA+AGG | - | chr4_4:34697242-34697261 | None:intergenic | 35.0% | |
| AAGGTAACCCGATCCTTATT+AGG | + | chr4_4:34688935-34688954 | Msa0678630:intron | 40.0% | |
| CATCGTTCCTAATAAGGATC+GGG | - | chr4_4:34688945-34688964 | None:intergenic | 40.0% | |
| ! | ATGGGTACGAATCCAACTTT+TGG | - | chr4_4:34689568-34689587 | None:intergenic | 40.0% |
| AAAAGTTGGATTCGTACCCA+TGG | + | chr4_4:34689567-34689586 | Msa0678630:intron | 40.0% | |
| AGAACTTGGATGAGATGGTA+AGG | - | chr4_4:34689616-34689635 | None:intergenic | 40.0% | |
| GGCAGTAGCAAAACATATTG+AGG | - | chr4_4:34690173-34690192 | None:intergenic | 40.0% | |
| !!! | CACTTTTTCAATACCCAAGG+CGG | + | chr4_4:34690287-34690306 | Msa0678630:intron | 40.0% |
| ! | TATGATTTGGAAACCGCCTT+GGG | - | chr4_4:34690303-34690322 | None:intergenic | 40.0% |
| ! | TGATTCTAGAAGAGAGGAGA+TGG | + | chr4_4:34690506-34690525 | Msa0678630:intron | 40.0% |
| ! | GATTCTAGAAGAGAGGAGAT+GGG | + | chr4_4:34690507-34690526 | Msa0678630:intron | 40.0% |
| ! | ATTCTAGAAGAGAGGAGATG+GGG | + | chr4_4:34690508-34690527 | Msa0678630:intron | 40.0% |
| AAAATTAATTGGGCCTGAGC+TGG | + | chr4_4:34690672-34690691 | Msa0678630:intron | 40.0% | |
| ! | ACTTAAAAGGCATACGACCA+GGG | - | chr4_4:34690735-34690754 | None:intergenic | 40.0% |
| ! | AACTTAAAAGGCATACGACC+AGG | - | chr4_4:34690736-34690755 | None:intergenic | 40.0% |
| CCTTAATCCGATTCTGATTG+GGG | + | chr4_4:34690889-34690908 | Msa0678630:intron | 40.0% | |
| GGTGAATCATGTCTTCTTTG+TGG | + | chr4_4:34691141-34691160 | Msa0678630:intron | 40.0% | |
| CCAAGCTTGCGTAAAATCTT+GGG | - | chr4_4:34691411-34691430 | None:intergenic | 40.0% | |
| CCGTAGTGAAATGTCAAAGA+AGG | + | chr4_4:34691440-34691459 | Msa0678630:intron | 40.0% | |
| TCTGGAGAGAACGAAAAGTT+AGG | + | chr4_4:34691472-34691491 | Msa0678630:intron | 40.0% | |
| CTGGAGAGAACGAAAAGTTA+GGG | + | chr4_4:34691473-34691492 | Msa0678630:intron | 40.0% | |
| GTTTCATTTCTGTTGCGAGA+AGG | + | chr4_4:34691495-34691514 | Msa0678630:intron | 40.0% | |
| !! | GGGTTGAGCTTTATTCATGA+AGG | + | chr4_4:34691571-34691590 | Msa0678630:intron | 40.0% |
| GGGCTTTCCTGAATAAAACT+CGG | - | chr4_4:34691706-34691725 | None:intergenic | 40.0% | |
| CCCAACCCTATGTAATCATT+TGG | + | chr4_4:34691969-34691988 | Msa0678630:intron | 40.0% | |
| CCCAAATGATTACATAGGGT+TGG | - | chr4_4:34691973-34691992 | None:intergenic | 40.0% | |
| CAACACATACGATCACAACT+AGG | - | chr4_4:34692010-34692029 | None:intergenic | 40.0% | |
| TCGAGATCTTGACTAAGATC+GGG | - | chr4_4:34692051-34692070 | None:intergenic | 40.0% | |
| GCTAGTCACTATATCACTGT+TGG | - | chr4_4:34692091-34692110 | None:intergenic | 40.0% | |
| AGTGATATAGTGACTAGCGA+GGG | + | chr4_4:34692093-34692112 | Msa0678630:intron | 40.0% | |
| GACTGAGATCATGAAGTTGA+AGG | + | chr4_4:34692182-34692201 | Msa0678630:intron | 40.0% | |
| CTGAGATCATGAAGTTGAAG+GGG | + | chr4_4:34692184-34692203 | Msa0678630:intron | 40.0% | |
| ! | TATGCGTGATAGTGTATACG+CGG | + | chr4_4:34692306-34692325 | Msa0678630:intron | 40.0% |
| AATTCCTTGGTAGGATCTGT+TGG | - | chr4_4:34692409-34692428 | None:intergenic | 40.0% | |
| TTATTAGTAAGTGGCCCGTT+AGG | - | chr4_4:34692715-34692734 | None:intergenic | 40.0% | |
| TGTTAGGATCCAATATGAGG+TGG | - | chr4_4:34692780-34692799 | None:intergenic | 40.0% | |
| CTGTGTTAGGATCCAATATG+AGG | - | chr4_4:34692783-34692802 | None:intergenic | 40.0% | |
| !!! | AAGTCTGTTTTTCAAGACGG+TGG | - | chr4_4:34692806-34692825 | None:intergenic | 40.0% |
| CTAGTTCATCAAAGTCCCAA+TGG | - | chr4_4:34692905-34692924 | None:intergenic | 40.0% | |
| AACAATAGATTGTTGTCCGG+CGG | + | chr4_4:34692930-34692949 | Msa0678630:intron | 40.0% | |
| ! | AAAACTCCAACGACTTGCTT+GGG | - | chr4_4:34693018-34693037 | None:intergenic | 40.0% |
| ! | TAAAACTCCAACGACTTGCT+TGG | - | chr4_4:34693019-34693038 | None:intergenic | 40.0% |
| TAACTCAAAGGGAGACATTG+CGG | - | chr4_4:34693085-34693104 | None:intergenic | 40.0% | |
| ACCACTAGATGCAAGTTTGA+GGG | - | chr4_4:34693279-34693298 | None:intergenic | 40.0% | |
| TGGTTGTAGAACAGGCAAAT+GGG | + | chr4_4:34693382-34693401 | Msa0678630:intron | 40.0% | |
| GGATTTCCATACTTAAGAGC+TGG | + | chr4_4:34693449-34693468 | Msa0678630:intron | 40.0% | |
| CATACACCAGCTCTTAAGTA+TGG | - | chr4_4:34693458-34693477 | None:intergenic | 40.0% | |
| GATTCTTCGTTCTCCTTATC+TGG | + | chr4_4:34693587-34693606 | Msa0678630:intron | 40.0% | |
| TTTGACGACAACACCAGATA+AGG | - | chr4_4:34693603-34693622 | None:intergenic | 40.0% | |
| CAGAAGAAGACATTGATGCT+GGG | - | chr4_4:34693650-34693669 | None:intergenic | 40.0% | |
| TCAGAAGAAGACATTGATGC+TGG | - | chr4_4:34693651-34693670 | None:intergenic | 40.0% | |
| ! | GCGATGAGTTGTGATTTTTG+AGG | + | chr4_4:34694026-34694045 | Msa0678630:intron | 40.0% |
| ATTCCTAGATATGGCCGATT+TGG | + | chr4_4:34694203-34694222 | Msa0678630:intron | 40.0% | |
| AAACCAAATCGGCCATATCT+AGG | - | chr4_4:34694209-34694228 | None:intergenic | 40.0% | |
| GGCTTACTAGTCAAATGGAA+AGG | + | chr4_4:34694348-34694367 | Msa0678630:intron | 40.0% | |
| AATGGAAAGGGTTTGTGTGT+AGG | + | chr4_4:34694361-34694380 | Msa0678630:intron | 40.0% | |
| AGACAGTGGATGTAAAGATC+CGG | + | chr4_4:34694430-34694449 | Msa0678630:intron | 40.0% | |
| AATTCCTTGGTAGGATCTGT+TGG | - | chr4_4:34692409-34692428 | None:intergenic | 40.0% | |
| TTATTAGTAAGTGGCCCGTT+AGG | - | chr4_4:34692715-34692734 | None:intergenic | 40.0% | |
| TGTTAGGATCCAATATGAGG+TGG | - | chr4_4:34692780-34692799 | None:intergenic | 40.0% | |
| ! | GTCGGAAGCTTTAACGAATT+AGG | - | chr4_4:34695122-34695141 | None:intergenic | 40.0% |
| ACTCTTCCATAACAGAAGGT+CGG | - | chr4_4:34695140-34695159 | None:intergenic | 40.0% | |
| CTAGACTCTTCCATAACAGA+AGG | - | chr4_4:34695144-34695163 | None:intergenic | 40.0% | |
| TACTGCCTATTTCCTCTGTA+TGG | + | chr4_4:34695498-34695517 | Msa0678630:intron | 40.0% | |
| TATTCTTTGCCAGTGCTTAG+TGG | + | chr4_4:34695668-34695687 | Msa0678630:intron | 40.0% | |
| TGTAATCAACCACTAAGCAC+TGG | - | chr4_4:34695680-34695699 | None:intergenic | 40.0% | |
| CAACACTCACCATAAGTTGT+TGG | - | chr4_4:34695770-34695789 | None:intergenic | 40.0% | |
| TTTAGCATTCGTTGCTGATG+TGG | + | chr4_4:34695819-34695838 | Msa0678630:intron | 40.0% | |
| TACAGCAGAACTCTTTCTTC+AGG | - | chr4_4:34696009-34696028 | None:intergenic | 40.0% | |
| ! | TTACGAGTCTCTTTTGTTGG+GGG | - | chr4_4:34696451-34696470 | None:intergenic | 40.0% |
| ! | CTTACGAGTCTCTTTTGTTG+GGG | - | chr4_4:34696452-34696471 | None:intergenic | 40.0% |
| ! | CCTTACGAGTCTCTTTTGTT+GGG | - | chr4_4:34696453-34696472 | None:intergenic | 40.0% |
| ! | ACCTTACGAGTCTCTTTTGT+TGG | - | chr4_4:34696454-34696473 | None:intergenic | 40.0% |
| CAAAAGAGACTCGTAAGGTT+AGG | + | chr4_4:34696455-34696474 | Msa0678630:intron | 40.0% | |
| ! | GGCGTCTACAAAATCACTTT+TGG | + | chr4_4:34696664-34696683 | Msa0678630:intron | 40.0% |
| CCATCCAATCAATGCATGTT+TGG | - | chr4_4:34696707-34696726 | None:intergenic | 40.0% | |
| !! | CCAAACATGCATTGATTGGA+TGG | + | chr4_4:34696704-34696723 | Msa0678630:intron | 40.0% |
| ATGCAGGTCATACAACTTCA+GGG | + | chr4_4:34696790-34696809 | Msa0678630:intron | 40.0% | |
| TACAACTTCAGGGAGATCAA+AGG | + | chr4_4:34696800-34696819 | Msa0678630:CDS | 40.0% | |
| ! | TGTTTCTACTTTCCTTGTGC+AGG | + | chr4_4:34696828-34696847 | Msa0678630:CDS | 40.0% |
| ACATAATGCTTACCTGCACA+AGG | - | chr4_4:34696843-34696862 | None:intergenic | 40.0% | |
| CTATGATGTTTGTAACAGGC+GGG | + | chr4_4:34696924-34696943 | Msa0678630:intron | 40.0% | |
| CAAGCTTCATGGTTTCTAAG+AGG | + | chr4_4:34696968-34696987 | Msa0678630:exon | 40.0% | |
| GTAGCTAAATTGCACACTGT+TGG | - | chr4_4:34696996-34697015 | None:intergenic | 40.0% | |
| CAAAGCAATCAGGCATGAAT+GGG | - | chr4_4:34697211-34697230 | None:intergenic | 40.0% | |
| ACAAAGCAATCAGGCATGAA+TGG | - | chr4_4:34697212-34697231 | None:intergenic | 40.0% | |
| TCTTCCTCTTCCCAAGAATC+AGG | + | chr4_4:34688816-34688835 | Msa0678630:five_prime_UTR | 45.0% | |
| GATACCTGATTCTTGGGAAG+AGG | - | chr4_4:34688823-34688842 | None:intergenic | 45.0% | |
| TAGTCTCTAGGTGAAGGAAG+TGG | + | chr4_4:34689143-34689162 | Msa0678630:intron | 45.0% | |
| GCAACTTAACCATAGGCCAT+GGG | - | chr4_4:34689586-34689605 | None:intergenic | 45.0% | |
| TGCAACTTAACCATAGGCCA+TGG | - | chr4_4:34689587-34689606 | None:intergenic | 45.0% | |
| CATCTCATCCAAGTTCTCCT+GGG | + | chr4_4:34689619-34689638 | Msa0678630:intron | 45.0% | |
| CACACTGATATTGGAAGTCC+AGG | - | chr4_4:34689662-34689681 | None:intergenic | 45.0% | |
| CTGGACTTCCAATATCAGTG+TGG | + | chr4_4:34689660-34689679 | Msa0678630:intron | 45.0% | |
| CGACTTTGCCACACTGATAT+TGG | - | chr4_4:34689671-34689690 | None:intergenic | 45.0% | |
| ! | GTATGATTTGGAAACCGCCT+TGG | - | chr4_4:34690304-34690323 | None:intergenic | 45.0% |
| ! | TTCTAGAAGAGAGGAGATGG+GGG | + | chr4_4:34690509-34690528 | Msa0678630:intron | 45.0% |
| ATGACTGATCGATGGTTCAC+TGG | + | chr4_4:34690534-34690553 | Msa0678630:intron | 45.0% | |
| ! | CTTAAAAGGCATACGACCAG+GGG | - | chr4_4:34690734-34690753 | None:intergenic | 45.0% |
| CCCCAATCAGAATCGGATTA+AGG | - | chr4_4:34690892-34690911 | None:intergenic | 45.0% | |
| TCCTTGTCCCCAATCAGAAT+CGG | - | chr4_4:34690899-34690918 | None:intergenic | 45.0% | |
| ! | TAGCTTTTAGGCGAAGGAAG+TGG | + | chr4_4:34691116-34691135 | Msa0678630:intron | 45.0% |
| ! | TTTTAGGCGAAGGAAGTGGT+TGG | + | chr4_4:34691120-34691139 | Msa0678630:intron | 45.0% |
| ! | TTTGGGTTTGGGTTTGGAGT+AGG | + | chr4_4:34691226-34691245 | Msa0678630:intron | 45.0% |
| ! | CCCAAGATTTTACGCAAGCT+TGG | + | chr4_4:34691408-34691427 | Msa0678630:intron | 45.0% |
| GCCAAGCTTGCGTAAAATCT+TGG | - | chr4_4:34691412-34691431 | None:intergenic | 45.0% | |
| ! | TTCTGTTGCGAGAAGGGTAT+TGG | + | chr4_4:34691502-34691521 | Msa0678630:intron | 45.0% |
| !! | TCTGTTGCGAGAAGGGTATT+GGG | + | chr4_4:34691503-34691522 | Msa0678630:intron | 45.0% |
| ATAAATCAGCCCCATACCCT+AGG | - | chr4_4:34691644-34691663 | None:intergenic | 45.0% | |
| !!! | GTTTGGGCCGAGTTTTATTC+AGG | + | chr4_4:34691696-34691715 | Msa0678630:intron | 45.0% |
| ATTACATAGGGTTGGGAGTG+GGG | - | chr4_4:34691965-34691984 | None:intergenic | 45.0% | |
| GATTACATAGGGTTGGGAGT+GGG | - | chr4_4:34691966-34691985 | None:intergenic | 45.0% | |
| TGATTACATAGGGTTGGGAG+TGG | - | chr4_4:34691967-34691986 | None:intergenic | 45.0% | |
| GATCTTGACTAAGATCGGGA+GGG | - | chr4_4:34692047-34692066 | None:intergenic | 45.0% | |
| AGATCTTGACTAAGATCGGG+AGG | - | chr4_4:34692048-34692067 | None:intergenic | 45.0% | |
| CAGTGATATAGTGACTAGCG+AGG | + | chr4_4:34692092-34692111 | Msa0678630:intron | 45.0% | |
| GATTCCTCTCTGAGTTGTGT+CGG | - | chr4_4:34692561-34692580 | None:intergenic | 45.0% | |
| ! | TTTCTGTTTAGGGCCAGAGT+AGG | - | chr4_4:34692583-34692602 | None:intergenic | 45.0% |
| GGGGAATTCTTAGGAGTTCT+AGG | - | chr4_4:34692622-34692641 | None:intergenic | 45.0% | |
| TTGTCCTCAAGTCTGAGCTT+AGG | + | chr4_4:34692824-34692843 | Msa0678630:intron | 45.0% | |
| AGTTCCTAAGCTCAGACTTG+AGG | - | chr4_4:34692831-34692850 | None:intergenic | 45.0% | |
| ! | GGGAGGAAGAAGTCGATTTA+AGG | - | chr4_4:34692859-34692878 | None:intergenic | 45.0% |
| ATCAAAGTCCCAATGGGATC+CGG | - | chr4_4:34692898-34692917 | None:intergenic | 45.0% | |
| CATGATATCACTGCGTTGTG+TGG | + | chr4_4:34693166-34693185 | Msa0678630:intron | 45.0% | |
| AAAAGTGAACCTACGGCGAA+GGG | - | chr4_4:34693224-34693243 | None:intergenic | 45.0% | |
| !! | TCACTTTTGATCGTTGCTCG+TGG | + | chr4_4:34693236-34693255 | Msa0678630:intron | 45.0% |
| ACTAGATGCAAGTTTGAGGG+TGG | - | chr4_4:34693276-34693295 | None:intergenic | 45.0% | |
| ACCCTCAAACTTGCATCTAG+TGG | + | chr4_4:34693275-34693294 | Msa0678630:intron | 45.0% | |
| CACCACTAGATGCAAGTTTG+AGG | - | chr4_4:34693280-34693299 | None:intergenic | 45.0% | |
| CTCAAACTTGCATCTAGTGG+TGG | + | chr4_4:34693278-34693297 | Msa0678630:intron | 45.0% | |
| TAATCGTCCAGCAGTTTCAG+TGG | + | chr4_4:34693329-34693348 | Msa0678630:intron | 45.0% | |
| TTCAGTGGTGGTACCAAAGA+AGG | + | chr4_4:34693344-34693363 | Msa0678630:intron | 45.0% | |
| GTGGTTGTAGAACAGGCAAA+TGG | + | chr4_4:34693381-34693400 | Msa0678630:intron | 45.0% | |
| AATCCACAATTGGGAGTCAC+AGG | - | chr4_4:34693434-34693453 | None:intergenic | 45.0% | |
| !! | ATCTCTGACGTTGGTGGTTT+AGG | - | chr4_4:34693500-34693519 | None:intergenic | 45.0% |
| GAAGTGAAGATCTCTGACGT+TGG | - | chr4_4:34693509-34693528 | None:intergenic | 45.0% | |
| ACATTGATGCTGGGAAATCC+AGG | - | chr4_4:34693641-34693660 | None:intergenic | 45.0% | |
| ATGTTTCCCAATCTGCGTCT+AGG | + | chr4_4:34693702-34693721 | Msa0678630:intron | 45.0% | |
| AGAGAACCTAGACGCAGATT+GGG | - | chr4_4:34693711-34693730 | None:intergenic | 45.0% | |
| TAGAGAACCTAGACGCAGAT+TGG | - | chr4_4:34693712-34693731 | None:intergenic | 45.0% | |
| TGGAAGGTGAAGCAATGCTA+TGG | - | chr4_4:34693751-34693770 | None:intergenic | 45.0% | |
| AGATGCAATGGGCATTCATG+AGG | - | chr4_4:34693775-34693794 | None:intergenic | 45.0% | |
| TTGTGGGTGAAAACCCCTTT+GGG | - | chr4_4:34693853-34693872 | None:intergenic | 45.0% | |
| TTTGTGGGTGAAAACCCCTT+TGG | - | chr4_4:34693854-34693873 | None:intergenic | 45.0% | |
| ! | GGGTTTTCACCCACAAATTC+TGG | + | chr4_4:34693857-34693876 | Msa0678630:intron | 45.0% |
| ! | TTTTGTGGTTTGAGGAAGGC+AGG | + | chr4_4:34694266-34694285 | Msa0678630:intron | 45.0% |
| TTTGTGGTTTGAGGAAGGCA+GGG | + | chr4_4:34694267-34694286 | Msa0678630:intron | 45.0% | |
| AAGGGTTTGTGTGTAGGCTT+AGG | + | chr4_4:34694367-34694386 | Msa0678630:intron | 45.0% | |
| TGTAGGCTTAGGTTTCTGAC+TGG | + | chr4_4:34694378-34694397 | Msa0678630:intron | 45.0% | |
| AGTGGATGTAAAGATCCGGT+AGG | + | chr4_4:34694434-34694453 | Msa0678630:intron | 45.0% | |
| GATGTAAAGATCCGGTAGGT+CGG | + | chr4_4:34694438-34694457 | Msa0678630:intron | 45.0% | |
| ATCAAATTGGTCCGACCTAC+CGG | - | chr4_4:34694452-34694471 | None:intergenic | 45.0% | |
| GTAGGTCGGACCAATTTGAT+AGG | + | chr4_4:34694452-34694471 | Msa0678630:intron | 45.0% | |
| GATTCCTCTCTGAGTTGTGT+CGG | - | chr4_4:34692561-34692580 | None:intergenic | 45.0% | |
| ! | TTTCTGTTTAGGGCCAGAGT+AGG | - | chr4_4:34692583-34692602 | None:intergenic | 45.0% |
| GGGGAATTCTTAGGAGTTCT+AGG | - | chr4_4:34692622-34692641 | None:intergenic | 45.0% | |
| AAGCTTCCGACCTTCTGTTA+TGG | + | chr4_4:34695131-34695150 | Msa0678630:intron | 45.0% | |
| GGTCTCTTAAGTTACTGCAG+AGG | + | chr4_4:34695194-34695213 | Msa0678630:intron | 45.0% | |
| TCAGACATGAAACTTGGCCT+TGG | - | chr4_4:34695731-34695750 | None:intergenic | 45.0% | |
| TTGACTAGATCCCTTTGCTG+AGG | + | chr4_4:34695850-34695869 | Msa0678630:intron | 45.0% | |
| TCAGCATTTGCCTCAGCAAA+GGG | - | chr4_4:34695863-34695882 | None:intergenic | 45.0% | |
| CTGTAATGGTACTGTTGTCG+AGG | + | chr4_4:34696024-34696043 | Msa0678630:CDS | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr4_4:34696124-34696143 | Msa0678630:intron | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr4_4:34696125-34696144 | Msa0678630:intron | 45.0% |
| GAAAGACCATACCCTGAGAA+AGG | - | chr4_4:34696235-34696254 | None:intergenic | 45.0% | |
| ! | CTTTTGTTGGGGGTTGAGTT+AGG | - | chr4_4:34696441-34696460 | None:intergenic | 45.0% |
| CCCAACAAAAGAGACTCGTA+AGG | + | chr4_4:34696450-34696469 | Msa0678630:intron | 45.0% | |
| GATGCAGGTCATACAACTTC+AGG | + | chr4_4:34696789-34696808 | Msa0678630:intron | 45.0% | |
| ACAGGCGGGAATTGTAAAGA+AGG | + | chr4_4:34696938-34696957 | Msa0678630:intron | 45.0% | |
| GGACACAACACAAAGCAATC+AGG | - | chr4_4:34697221-34697240 | None:intergenic | 45.0% | |
| !! | ATAATATCATAAATTATTAA+GGG | - | chr4_4:34690144-34690163 | None:intergenic | 5.0% |
| !! | TATTTACTTAATATATTATT+GGG | - | chr4_4:34691597-34691616 | None:intergenic | 5.0% |
| !! | TTATTTACTTAATATATTAT+TGG | - | chr4_4:34691598-34691617 | None:intergenic | 5.0% |
| !! | TATTTACTTAATATATTATT+GGG | - | chr4_4:34691597-34691616 | None:intergenic | 5.0% |
| !! | TTATTTACTTAATATATTAT+TGG | - | chr4_4:34691598-34691617 | None:intergenic | 5.0% |
| !! | TAATTAATTTAATATAGTTA+GGG | - | chr4_4:34691772-34691791 | None:intergenic | 5.0% |
| !! | TTAATTAATTTAATATAGTT+AGG | - | chr4_4:34691773-34691792 | None:intergenic | 5.0% |
| !!! | ATATTAATTGATTTTATAAA+GGG | - | chr4_4:34691801-34691820 | None:intergenic | 5.0% |
| !!! | TATATTAATTGATTTTATAA+AGG | - | chr4_4:34691802-34691821 | None:intergenic | 5.0% |
| !!! | ATACTTTTTTTTTTTTTTTA+AGG | - | chr4_4:34694005-34694024 | None:intergenic | 5.0% |
| CTCTAGGTGAAGGAAGTGGT+TGG | + | chr4_4:34689147-34689166 | Msa0678630:intron | 50.0% | |
| ATCTATGCATTTGCGCACCG+AGG | - | chr4_4:34689494-34689513 | None:intergenic | 50.0% | |
| CCAGGAGAACTTGGATGAGA+TGG | - | chr4_4:34689621-34689640 | None:intergenic | 50.0% | |
| CCATCTCATCCAAGTTCTCC+TGG | + | chr4_4:34689618-34689637 | Msa0678630:intron | 50.0% | |
| CTAAGGTCAAGGCTGCAACT+AGG | - | chr4_4:34690194-34690213 | None:intergenic | 50.0% | |
| ACTGATCGATGGTTCACTGG+TGG | + | chr4_4:34690537-34690556 | Msa0678630:intron | 50.0% | |
| CTGATCGATGGTTCACTGGT+GGG | + | chr4_4:34690538-34690557 | Msa0678630:intron | 50.0% | |
| TCCGATTCTGATTGGGGACA+AGG | + | chr4_4:34690895-34690914 | Msa0678630:intron | 50.0% | |
| CAAAGAAGGATGGCACAGTC+TGG | + | chr4_4:34691454-34691473 | Msa0678630:intron | 50.0% | |
| TAGTGACTAGCGAGGGAATC+TGG | + | chr4_4:34692100-34692119 | Msa0678630:intron | 50.0% | |
| TTGAAGGGGCTGCTAGAACT+GGG | + | chr4_4:34692198-34692217 | Msa0678630:intron | 50.0% | |
| GGAACCAACAGATCCTACCA+AGG | + | chr4_4:34692402-34692421 | Msa0678630:intron | 50.0% | |
| TTGTGTCGGAGCTTTGCTCT+GGG | - | chr4_4:34692547-34692566 | None:intergenic | 50.0% | |
| CTCAGAGAGGAATCCTACTC+TGG | + | chr4_4:34692567-34692586 | Msa0678630:intron | 50.0% | |
| TTCAAGACGGTGGCTGTGTT+AGG | - | chr4_4:34692796-34692815 | None:intergenic | 50.0% | |
| TCAAAGTCCCAATGGGATCC+GGG | - | chr4_4:34692897-34692916 | None:intergenic | 50.0% | |
| ! | AGATTGTTGTCCGGCGGTTT+TGG | + | chr4_4:34692936-34692955 | Msa0678630:intron | 50.0% |
| GTTTCCTCTTCCAAAACCGC+CGG | - | chr4_4:34692949-34692968 | None:intergenic | 50.0% | |
| ! | TCCAACGACTTGCTTGGGAT+GGG | - | chr4_4:34693013-34693032 | None:intergenic | 50.0% |
| AAGGGAGACATTGCGGAAAG+TGG | - | chr4_4:34693078-34693097 | None:intergenic | 50.0% | |
| CAAAAGTGAACCTACGGCGA+AGG | - | chr4_4:34693225-34693244 | None:intergenic | 50.0% | |
| CTTGCATCTAGTGGTGGTAG+TGG | + | chr4_4:34693284-34693303 | Msa0678630:intron | 50.0% | |
| AGTGGTGGTACCAAAGAAGG+TGG | + | chr4_4:34693347-34693366 | Msa0678630:intron | 50.0% | |
| TGGTACCAAAGAAGGTGGAG+TGG | + | chr4_4:34693352-34693371 | Msa0678630:intron | 50.0% | |
| AAAGAAGGTGGAGTGGTGTG+CGG | + | chr4_4:34693359-34693378 | Msa0678630:intron | 50.0% | |
| TCTCCTGTGACTCCCAATTG+TGG | + | chr4_4:34693428-34693447 | Msa0678630:intron | 50.0% | |
| GTGAAGATCTCTGACGTTGG+TGG | - | chr4_4:34693506-34693525 | None:intergenic | 50.0% | |
| TGGGCATTCATGAGGATGGA+AGG | - | chr4_4:34693767-34693786 | None:intergenic | 50.0% | |
| GCAATGGGCATTCATGAGGA+TGG | - | chr4_4:34693771-34693790 | None:intergenic | 50.0% | |
| ! | TGCATCGATGATCCACCCAA+AGG | + | chr4_4:34693835-34693854 | Msa0678630:intron | 50.0% |
| ! | GCATCGATGATCCACCCAAA+GGG | + | chr4_4:34693836-34693855 | Msa0678630:intron | 50.0% |
| CATCGATGATCCACCCAAAG+GGG | + | chr4_4:34693837-34693856 | Msa0678630:intron | 50.0% | |
| GAAGGGCTGCCAGAATTTGT+GGG | - | chr4_4:34693869-34693888 | None:intergenic | 50.0% | |
| TGAAGGGCTGCCAGAATTTG+TGG | - | chr4_4:34693870-34693889 | None:intergenic | 50.0% | |
| TTGTGGTTTGAGGAAGGCAG+GGG | + | chr4_4:34694268-34694287 | Msa0678630:intron | 50.0% | |
| GGAACCAACAGATCCTACCA+AGG | + | chr4_4:34692402-34692421 | Msa0678630:intron | 50.0% | |
| TTGTGTCGGAGCTTTGCTCT+GGG | - | chr4_4:34692547-34692566 | None:intergenic | 50.0% | |
| CTCAGAGAGGAATCCTACTC+TGG | + | chr4_4:34692567-34692586 | Msa0678630:intron | 50.0% | |
| AGATCTGGGGGAGAGTTGTT+AGG | - | chr4_4:34694867-34694886 | None:intergenic | 50.0% | |
| AGGATTTGACCCACTTGCGA+AGG | + | chr4_4:34695167-34695186 | Msa0678630:intron | 50.0% | |
| GGATTTGACCCACTTGCGAA+GGG | + | chr4_4:34695168-34695187 | Msa0678630:intron | 50.0% | |
| CTCAGCATTTGCCTCAGCAA+AGG | - | chr4_4:34695864-34695883 | None:intergenic | 50.0% | |
| CTTTGCTGAGGCAAATGCTG+AGG | + | chr4_4:34695862-34695881 | Msa0678630:CDS | 50.0% | |
| AAATGCTGAGGACTCAGGTG+CGG | + | chr4_4:34695874-34695893 | Msa0678630:CDS | 50.0% | |
| TTCCGTTACGCTGCTGTACA+CGG | - | chr4_4:34695922-34695941 | None:intergenic | 50.0% | |
| GACAAACCTGTCCCAACTCA+GGG | - | chr4_4:34696051-34696070 | None:intergenic | 50.0% | |
| AGACAAACCTGTCCCAACTC+AGG | - | chr4_4:34696052-34696071 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr4_4:34696126-34696145 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr4_4:34696123-34696142 | Msa0678630:intron | 50.0% |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr4_4:34696129-34696148 | Msa0678630:intron | 50.0% | |
| GGATTCGTACCCATGGCCTA+TGG | + | chr4_4:34689574-34689593 | Msa0678630:intron | 55.0% | |
| GCATACGACCCAGGAGAACT+TGG | - | chr4_4:34689630-34689649 | None:intergenic | 55.0% | |
| AGTTCTCCTGGGTCGTATGC+AGG | + | chr4_4:34689630-34689649 | Msa0678630:intron | 55.0% | |
| GTTCTCCTGGGTCGTATGCA+GGG | + | chr4_4:34689631-34689650 | Msa0678630:intron | 55.0% | |
| TTCTCCTGGGTCGTATGCAG+GGG | + | chr4_4:34689632-34689651 | Msa0678630:intron | 55.0% | |
| TGGGGGAGATGACTGATCGA+TGG | + | chr4_4:34690526-34690545 | Msa0678630:intron | 55.0% | |
| ATCGATGGTTCACTGGTGGG+TGG | + | chr4_4:34690541-34690560 | Msa0678630:intron | 55.0% | |
| TAATTGGGCCTGAGCTGGTG+TGG | + | chr4_4:34690677-34690696 | Msa0678630:intron | 55.0% | |
| ! | AAAAGGCATACGACCAGGGG+CGG | - | chr4_4:34690731-34690750 | None:intergenic | 55.0% |
| CTTGACTAAGATCGGGAGGG+CGG | - | chr4_4:34692044-34692063 | None:intergenic | 55.0% | |
| GTTGAAGGGGCTGCTAGAAC+TGG | + | chr4_4:34692197-34692216 | Msa0678630:intron | 55.0% | |
| GTTGTGTCGGAGCTTTGCTC+TGG | - | chr4_4:34692548-34692567 | None:intergenic | 55.0% | |
| AGCTCCGACACAACTCAGAG+AGG | + | chr4_4:34692554-34692573 | Msa0678630:intron | 55.0% | |
| GGCGGAAAAAGCTACATGGG+AGG | - | chr4_4:34692876-34692895 | None:intergenic | 55.0% | |
| CCGGGCGGAAAAAGCTACAT+GGG | - | chr4_4:34692879-34692898 | None:intergenic | 55.0% | |
| !! | CCCATGTAGCTTTTTCCGCC+CGG | + | chr4_4:34692876-34692895 | Msa0678630:intron | 55.0% |
| TCCGGGCGGAAAAAGCTACA+TGG | - | chr4_4:34692880-34692899 | None:intergenic | 55.0% | |
| ! | TTTTTCCGCCCGGATCCCAT+TGG | + | chr4_4:34692886-34692905 | Msa0678630:intron | 55.0% |
| ! | TTTTCCGCCCGGATCCCATT+GGG | + | chr4_4:34692887-34692906 | Msa0678630:intron | 55.0% |
| !!! | TTGTCCGGCGGTTTTGGAAG+AGG | + | chr4_4:34692942-34692961 | Msa0678630:intron | 55.0% |
| ACCCATCCCAAGCAAGTCGT+TGG | + | chr4_4:34693009-34693028 | Msa0678630:intron | 55.0% | |
| ! | CTCCAACGACTTGCTTGGGA+TGG | - | chr4_4:34693014-34693033 | None:intergenic | 55.0% |
| TTGATCGTTGCTCGTGGCTG+TGG | + | chr4_4:34693242-34693261 | Msa0678630:intron | 55.0% | |
| !! | GCATCTAGTGGTGGTAGTGG+TGG | + | chr4_4:34693287-34693306 | Msa0678630:intron | 55.0% |
| !! | TCTAGTGGTGGTAGTGGTGG+TGG | + | chr4_4:34693290-34693309 | Msa0678630:intron | 55.0% |
| !! | CTAGTGGTGGTAGTGGTGGT+GGG | + | chr4_4:34693291-34693310 | Msa0678630:intron | 55.0% |
| !! | TAGTGGTGGTAGTGGTGGTG+GGG | + | chr4_4:34693292-34693311 | Msa0678630:intron | 55.0% |
| TCGTCCAGCAGTTTCAGTGG+TGG | + | chr4_4:34693332-34693351 | Msa0678630:intron | 55.0% | |
| GGTACCACCACTGAAACTGC+TGG | - | chr4_4:34693339-34693358 | None:intergenic | 55.0% | |
| GCACACCACTCCACCTTCTT+TGG | - | chr4_4:34693360-34693379 | None:intergenic | 55.0% | |
| GTGTGCGGTGGTTGTAGAAC+AGG | + | chr4_4:34693374-34693393 | Msa0678630:intron | 55.0% | |
| TGGGTGAAAACCCCTTTGGG+TGG | - | chr4_4:34693850-34693869 | None:intergenic | 55.0% | |
| GTTGTGTCGGAGCTTTGCTC+TGG | - | chr4_4:34692548-34692567 | None:intergenic | 55.0% | |
| AGCTCCGACACAACTCAGAG+AGG | + | chr4_4:34692554-34692573 | Msa0678630:intron | 55.0% | |
| AGACCTAGCCCTTCGCAAGT+GGG | - | chr4_4:34695179-34695198 | None:intergenic | 55.0% | |
| !! | ACCTTCTGCTGCTTTGCGAG+TGG | + | chr4_4:34695224-34695243 | Msa0678630:intron | 55.0% |
| !! | CCTTCTGCTGCTTTGCGAGT+GGG | + | chr4_4:34695225-34695244 | Msa0678630:intron | 55.0% |
| !! | CTTCTGCTGCTTTGCGAGTG+GGG | + | chr4_4:34695226-34695245 | Msa0678630:intron | 55.0% |
| !! | TTCTGCTGCTTTGCGAGTGG+GGG | + | chr4_4:34695227-34695246 | Msa0678630:intron | 55.0% |
| GAGGCAAATGCTGAGGACTC+AGG | + | chr4_4:34695869-34695888 | Msa0678630:CDS | 55.0% | |
| AATGCTGAGGACTCAGGTGC+GGG | + | chr4_4:34695875-34695894 | Msa0678630:CDS | 55.0% | |
| GTCCGTGTACAGCAGCGTAA+CGG | + | chr4_4:34695917-34695936 | Msa0678630:CDS | 55.0% | |
| ! | GTGTACAGCAGCGTAACGGA+AGG | + | chr4_4:34695921-34695940 | Msa0678630:CDS | 55.0% |
| TGTTGTCGAGGACCCTGAGT+TGG | + | chr4_4:34696036-34696055 | Msa0678630:CDS | 55.0% | |
| GTTGTCGAGGACCCTGAGTT+GGG | + | chr4_4:34696037-34696056 | Msa0678630:CDS | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr4_4:34696131-34696150 | None:intergenic | 55.0% | |
| TTTGGCCGACCCCACTTAGT+GGG | - | chr4_4:34696137-34696156 | None:intergenic | 55.0% | |
| ATTTGGCCGACCCCACTTAG+TGG | - | chr4_4:34696138-34696157 | None:intergenic | 55.0% | |
| TGGTTCATCTCACGGTCACG+CGG | - | chr4_4:34696354-34696373 | None:intergenic | 55.0% | |
| ! | GATGGTTCACTGGTGGGTGG+TGG | + | chr4_4:34690544-34690563 | Msa0678630:intron | 60.0% |
| !! | TTCACTGGTGGGTGGTGGAC+TGG | + | chr4_4:34690549-34690568 | Msa0678630:intron | 60.0% |
| !! | TCACTGGTGGGTGGTGGACT+GGG | + | chr4_4:34690550-34690569 | Msa0678630:intron | 60.0% |
| GGCAATAGCCACACCAGCTC+AGG | - | chr4_4:34690688-34690707 | None:intergenic | 60.0% | |
| AGGGGCTGCTAGAACTGGGA+AGG | + | chr4_4:34692202-34692221 | Msa0678630:intron | 60.0% | |
| GCTGCTAGAACTGGGAAGGC+TGG | + | chr4_4:34692206-34692225 | Msa0678630:intron | 60.0% | |
| AAGTCCCAATGGGATCCGGG+CGG | - | chr4_4:34692894-34692913 | None:intergenic | 60.0% | |
| GAAGACGATCCCTTCGCCGT+AGG | + | chr4_4:34693212-34693231 | Msa0678630:intron | 60.0% | |
| ATCGTTGCTCGTGGCTGTGG+AGG | + | chr4_4:34693245-34693264 | Msa0678630:intron | 60.0% | |
| TGACCCACTTGCGAAGGGCT+AGG | + | chr4_4:34695173-34695192 | Msa0678630:intron | 60.0% | |
| GAGACCTAGCCCTTCGCAAG+TGG | - | chr4_4:34695180-34695199 | None:intergenic | 60.0% | |
| CCCACTCGCAAAGCAGCAGA+AGG | - | chr4_4:34695228-34695247 | None:intergenic | 60.0% | |
| !! | TCTGCTGCTTTGCGAGTGGG+GGG | + | chr4_4:34695228-34695247 | Msa0678630:intron | 60.0% |
| ATGCTGAGGACTCAGGTGCG+GGG | + | chr4_4:34695876-34695895 | Msa0678630:CDS | 60.0% | |
| TCCTGGGTCGTATGCAGGGG+CGG | + | chr4_4:34689635-34689654 | Msa0678630:intron | 65.0% | |
| GTTGCTCGTGGCTGTGGAGG+AGG | + | chr4_4:34693248-34693267 | Msa0678630:intron | 65.0% | |
| GAAGGTGGAGTGGTGTGCGG+TGG | + | chr4_4:34693362-34693381 | Msa0678630:intron | 65.0% | |
| ! | CGAGGACCCTGAGTTGGGAC+AGG | + | chr4_4:34696042-34696061 | Msa0678630:CDS | 65.0% |
| TCCGCCCCTGCATACGACCC+AGG | - | chr4_4:34689639-34689658 | None:intergenic | 70.0% | |
| GTCGTATGCAGGGGCGGACC+TGG | + | chr4_4:34689641-34689660 | Msa0678630:intron | 70.0% | |
| TGCCACACCCTGCCCTGCTC+AGG | + | chr4_4:34690704-34690723 | Msa0678630:intron | 70.0% | |
| GACCTGAGCAGGGCAGGGTG+TGG | - | chr4_4:34690709-34690728 | None:intergenic | 70.0% | |
| ACCAGGGGCGGACCTGAGCA+GGG | - | chr4_4:34690719-34690738 | None:intergenic | 70.0% | |
| GGGCGGACCTGAGCAGGGCA+GGG | - | chr4_4:34690714-34690733 | None:intergenic | 75.0% | |
| GACCAGGGGCGGACCTGAGC+AGG | - | chr4_4:34690720-34690739 | None:intergenic | 75.0% | |
| ! | GGGGCGGACCTGAGCAGGGC+AGG | - | chr4_4:34690715-34690734 | None:intergenic | 80.0% |
| ! | GCCCTGCTCAGGTCCGCCCC+TGG | + | chr4_4:34690715-34690734 | Msa0678630:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 34688702 | 34697323 | 34688702 | ID=Msa0678630;Name=Msa0678630 |
| chr4_4 | mRNA | 34688702 | 34697323 | 34688702 | ID=Msa0678630-mRNA-1;Parent=Msa0678630;Name=Msa0678630-mRNA-1;_AED=0.07;_eAED=0.07;_QI=198|1|1|1|0.75|0.6|5|337|113 |
| chr4_4 | exon | 34688702 | 34688837 | 34688702 | ID=Msa0678630-mRNA-1:exon:8325;Parent=Msa0678630-mRNA-1 |
| chr4_4 | exon | 34695681 | 34695779 | 34695681 | ID=Msa0678630-mRNA-1:exon:8326;Parent=Msa0678630-mRNA-1 |
| chr4_4 | exon | 34695858 | 34696063 | 34695858 | ID=Msa0678630-mRNA-1:exon:8327;Parent=Msa0678630-mRNA-1 |
| chr4_4 | exon | 34696796 | 34696849 | 34696796 | ID=Msa0678630-mRNA-1:exon:8328;Parent=Msa0678630-mRNA-1 |
| chr4_4 | exon | 34696942 | 34697323 | 34696942 | ID=Msa0678630-mRNA-1:exon:8329;Parent=Msa0678630-mRNA-1 |
| chr4_4 | five_prime_UTR | 34688702 | 34688837 | 34688702 | ID=Msa0678630-mRNA-1:five_prime_utr;Parent=Msa0678630-mRNA-1 |
| chr4_4 | five_prime_UTR | 34695681 | 34695742 | 34695681 | ID=Msa0678630-mRNA-1:five_prime_utr;Parent=Msa0678630-mRNA-1 |
| chr4_4 | CDS | 34695743 | 34695779 | 34695743 | ID=Msa0678630-mRNA-1:cds;Parent=Msa0678630-mRNA-1 |
| chr4_4 | CDS | 34695858 | 34696063 | 34695858 | ID=Msa0678630-mRNA-1:cds;Parent=Msa0678630-mRNA-1 |
| chr4_4 | CDS | 34696796 | 34696849 | 34696796 | ID=Msa0678630-mRNA-1:cds;Parent=Msa0678630-mRNA-1 |
| chr4_4 | CDS | 34696942 | 34696986 | 34696942 | ID=Msa0678630-mRNA-1:cds;Parent=Msa0678630-mRNA-1 |
| chr4_4 | three_prime_UTR | 34696987 | 34697323 | 34696987 | ID=Msa0678630-mRNA-1:three_prime_utr;Parent=Msa0678630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
