Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679950 | XP_024636833.1 | 86.364 | 132 | 4 | 1 | 90 | 207 | 186 | 317 | 2.60e-70 | 227 |
| Msa0679950 | XP_024636833.1 | 90.476 | 42 | 4 | 0 | 1 | 42 | 1 | 42 | 2.78e-13 | 78.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679950 | A0A396I6X6 | 86.364 | 132 | 4 | 1 | 90 | 207 | 186 | 317 | 1.24e-70 | 227 |
| Msa0679950 | A0A396I6X6 | 90.476 | 42 | 4 | 0 | 1 | 42 | 1 | 42 | 1.33e-13 | 78.6 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0679950 | Msa0909710 | 0.802709 | 4.931695e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679950 | MtrunA17_Chr4g0026091 | 86.364 | 132 | 4 | 1 | 90 | 207 | 186 | 317 | 2.39e-74 | 227 |
| Msa0679950 | MtrunA17_Chr4g0026091 | 90.476 | 42 | 4 | 0 | 1 | 42 | 1 | 42 | 2.56e-17 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679950 | AT5G22340.1 | 67.424 | 132 | 29 | 1 | 90 | 207 | 192 | 323 | 1.53e-55 | 179 |
| Msa0679950 | AT5G22340.2 | 73.333 | 90 | 24 | 0 | 90 | 179 | 192 | 281 | 8.25e-39 | 136 |
Find 49 sgRNAs with CRISPR-Local
Find 562 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGATCCCGGCAGCAATTTA+TGG | 0.193346 | 4_4:-38608393 | Msa0679950:CDS |
| CTCAGCCTTCAAAATTCTTC+TGG | 0.224073 | 4_4:+38607888 | None:intergenic |
| CAGCTTGTGCCAGCCATGTT+TGG | 0.234831 | 4_4:-38607981 | Msa0679950:CDS |
| TTCGCTACATCCTCAAATAT+TGG | 0.265182 | 4_4:-38607819 | Msa0679950:three_prime_UTR |
| AGAAGAAAATGAAGGGGTTT+TGG | 0.276021 | 4_4:+38617183 | None:intergenic |
| GGCAGCAATTTATGGACTTT+GGG | 0.326123 | 4_4:-38608385 | Msa0679950:CDS |
| CGGCAGCAATTTATGGACTT+TGG | 0.331522 | 4_4:-38608386 | Msa0679950:CDS |
| AGCTTGTGCCAGCCATGTTT+GGG | 0.359430 | 4_4:-38607980 | Msa0679950:CDS |
| TCATAACCAGAATTGGTATA+AGG | 0.366676 | 4_4:-38608488 | Msa0679950:intron |
| TGAGTCTTGCTCTGTTGTCT+AGG | 0.404067 | 4_4:+38609797 | None:intergenic |
| ATCTCCAAGGCTTGTGATCC+CGG | 0.413235 | 4_4:-38608406 | Msa0679950:CDS |
| GCAAAATAACAAACCTGAAA+AGG | 0.424254 | 4_4:+38609249 | None:intergenic |
| ATTCTTTCGAGAAAGCAATC+AGG | 0.431986 | 4_4:-38608449 | Msa0679950:CDS |
| GAATTGAAAGGTGTAAGAAT+TGG | 0.434883 | 4_4:+38617207 | None:intergenic |
| TATAGAGACAATAAAGACTT+AGG | 0.447368 | 4_4:-38607921 | Msa0679950:CDS |
| ATGTAAGTAGTGCTTAGTTC+CGG | 0.451394 | 4_4:+38607780 | None:intergenic |
| TATTTGAGGAACTGTTTCAC+TGG | 0.469996 | 4_4:+38608633 | None:intergenic |
| TGTTTCACTGGATATGTTGT+CGG | 0.489045 | 4_4:+38608645 | None:intergenic |
| TGGAAATGACCAGCTGCATC+CGG | 0.505977 | 4_4:-38607799 | Msa0679950:three_prime_UTR |
| CAAAGTCCATAAATTGCTGC+CGG | 0.506806 | 4_4:+38608387 | None:intergenic |
| TGCTTAGTTCCGGATGCAGC+TGG | 0.525733 | 4_4:+38607790 | None:intergenic |
| CTGGTCATTTCCAATATTTG+AGG | 0.526896 | 4_4:+38607809 | None:intergenic |
| GCTACTACTGCTACTACTAC+AGG | 0.531416 | 4_4:-38617100 | Msa0679950:intron |
| TGTTCTTTATTTGCTAAAGT+CGG | 0.535697 | 4_4:-38609720 | Msa0679950:CDS |
| CTTTCTCGAAAGAATCACTA+AGG | 0.538450 | 4_4:+38608457 | None:intergenic |
| AAGAGAGGTATCATACAGAT+TGG | 0.547590 | 4_4:+38609752 | None:intergenic |
| GACAAATCTAATGCTATCCA+TGG | 0.549721 | 4_4:+38617231 | None:intergenic |
| GTTGGGAAAGAAGAAAATGA+AGG | 0.554142 | 4_4:+38617175 | None:intergenic |
| GCTGCCGGGATCACAAGCCT+TGG | 0.555710 | 4_4:+38608402 | None:intergenic |
| ACAAACATCCCAAACATGGC+TGG | 0.556898 | 4_4:+38607972 | None:intergenic |
| GTATAGCACTTTCATCTCCA+AGG | 0.559840 | 4_4:-38608419 | Msa0679950:CDS |
| TTCTTTCGAGAAAGCAATCA+GGG | 0.562124 | 4_4:-38608448 | Msa0679950:CDS |
| GCTGCTATAAGTTATGCGAT+TGG | 0.572504 | 4_4:-38609275 | Msa0679950:CDS |
| AAAGTCCATAAATTGCTGCC+GGG | 0.582914 | 4_4:+38608388 | None:intergenic |
| TTGGGAAAGAAGAAAATGAA+GGG | 0.586768 | 4_4:+38617176 | None:intergenic |
| GAGAAAGCAATCAGGGGTAG+CGG | 0.601554 | 4_4:-38608441 | Msa0679950:CDS |
| CATGTTGATACAAGAGCTGA+AGG | 0.605276 | 4_4:+38608668 | None:intergenic |
| AGTCGGTAACACTTACCTCA+AGG | 0.621584 | 4_4:-38609703 | Msa0679950:CDS |
| GTAGACAAACATCCCAAACA+TGG | 0.634660 | 4_4:+38607968 | None:intergenic |
| GCTCTCAGTGATGAAACAGA+GGG | 0.637121 | 4_4:+38617133 | None:intergenic |
| ATCAAAACATACATGCCTTG+AGG | 0.651806 | 4_4:+38609688 | None:intergenic |
| CAGAATTGGTATAAGGAGTG+AGG | 0.654806 | 4_4:-38608481 | Msa0679950:CDS |
| AGCTCTCAGTGATGAAACAG+AGG | 0.663245 | 4_4:+38617132 | None:intergenic |
| AGAACATACTGAGTCAAGAG+AGG | 0.665287 | 4_4:+38609737 | None:intergenic |
| ATAGTGTGATCTGCTGAACA+TGG | 0.672212 | 4_4:+38607844 | None:intergenic |
| TGGGAAAGAAGAAAATGAAG+GGG | 0.672836 | 4_4:+38617177 | None:intergenic |
| TCTCAGTGATGAAACAGAGG+GGG | 0.698666 | 4_4:+38617135 | None:intergenic |
| CTCTCAGTGATGAAACAGAG+GGG | 0.719051 | 4_4:+38617134 | None:intergenic |
| TCTTTCGAGAAAGCAATCAG+GGG | 0.734354 | 4_4:-38608447 | Msa0679950:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTAAAATTTTATAT+TGG | + | chr4_4:38609109-38609128 | None:intergenic | 0.0% |
| !! | AATAATAATAATAATAAATT+TGG | - | chr4_4:38614010-38614029 | Msa0679950:intron | 0.0% |
| !! | ATAATATTGATATGAATATT+AGG | + | chr4_4:38608988-38609007 | None:intergenic | 10.0% |
| !!! | AAACATCTTTTTAAATAATA+AGG | + | chr4_4:38609695-38609714 | None:intergenic | 10.0% |
| !!! | CTATAATTAATAAATTTTCA+AGG | + | chr4_4:38610852-38610871 | None:intergenic | 10.0% |
| !! | CTTGAAAATTTATTAATTAT+AGG | - | chr4_4:38610850-38610869 | Msa0679950:intron | 10.0% |
| !!! | AGAATAATTGTATATTTTTT+CGG | - | chr4_4:38611167-38611186 | Msa0679950:intron | 10.0% |
| !!! | AGTAATTCTTTATTTTATAA+AGG | + | chr4_4:38612360-38612379 | None:intergenic | 10.0% |
| !!! | TGGTAATTAATTTATTATTT+TGG | + | chr4_4:38612419-38612438 | None:intergenic | 10.0% |
| !! | TTGTTATAATTTGAATTATT+GGG | + | chr4_4:38615040-38615059 | None:intergenic | 10.0% |
| !! | ATTGTTATAATTTGAATTAT+TGG | + | chr4_4:38615041-38615060 | None:intergenic | 10.0% |
| !! | AATTAATCTTATAAACTTAT+CGG | + | chr4_4:38615869-38615888 | None:intergenic | 10.0% |
| !! | AATAAAACTTAAGATTTAAT+TGG | + | chr4_4:38616063-38616082 | None:intergenic | 10.0% |
| !! | TAGAATATAATTATATGTGT+TGG | - | chr4_4:38608079-38608098 | Msa0679950:intron | 15.0% |
| !! | TGATATATGATAAAACATTA+TGG | + | chr4_4:38608314-38608333 | None:intergenic | 15.0% |
| !! | TTAAAAATAAAATAGTTCAG+AGG | - | chr4_4:38609119-38609138 | Msa0679950:intron | 15.0% |
| !! | TTTATCATTTATGTTTACTT+TGG | + | chr4_4:38609285-38609304 | None:intergenic | 15.0% |
| !! | AAAGTAAACATAAATGATAA+AGG | - | chr4_4:38609284-38609303 | Msa0679950:intron | 15.0% |
| !!! | AAATTTTAATTTTCCAATAG+AGG | + | chr4_4:38610188-38610207 | None:intergenic | 15.0% |
| !!! | ATTAATAAATTTTCAAGGTT+TGG | + | chr4_4:38610847-38610866 | None:intergenic | 15.0% |
| !!! | TTAATTTGATCTATTCAAAA+TGG | - | chr4_4:38611715-38611734 | Msa0679950:intron | 15.0% |
| !! | TGTTTATCAAATCATTTAAT+TGG | - | chr4_4:38611839-38611858 | Msa0679950:intron | 15.0% |
| !! | AAGAAAAAATTCTTTATATG+TGG | + | chr4_4:38612095-38612114 | None:intergenic | 15.0% |
| !!! | GAACATTTTATATAAGTAAT+AGG | + | chr4_4:38612157-38612176 | None:intergenic | 15.0% |
| !! | ATAAAGAATTACTGAAATTT+AGG | - | chr4_4:38612367-38612386 | Msa0679950:intron | 15.0% |
| !! | TAAAGAATTACTGAAATTTA+GGG | - | chr4_4:38612368-38612387 | Msa0679950:intron | 15.0% |
| !!! | TGTTCATAGTATTTTAAAAT+TGG | + | chr4_4:38612958-38612977 | None:intergenic | 15.0% |
| !! | TGAAAATTAACTTATCAATT+TGG | - | chr4_4:38613254-38613273 | Msa0679950:intron | 15.0% |
| !! | ATAATAAATAAATGAGAAGA+GGG | + | chr4_4:38613795-38613814 | None:intergenic | 15.0% |
| !! | AATAATAAATAAATGAGAAG+AGG | + | chr4_4:38613796-38613815 | None:intergenic | 15.0% |
| !! | ATTATTATTATTAATGTACC+TGG | + | chr4_4:38613957-38613976 | None:intergenic | 15.0% |
| !! | TCTATCAATTAAATGAAAAA+TGG | - | chr4_4:38614424-38614443 | Msa0679950:intron | 15.0% |
| !!! | TTATTTTAAGTTCATTGTTA+CGG | + | chr4_4:38614515-38614534 | None:intergenic | 15.0% |
| !! | TTAGAAAGAAAAAAAAACAT+TGG | + | chr4_4:38614879-38614898 | None:intergenic | 15.0% |
| !! | TCATAAATATTAAATGAGAT+TGG | + | chr4_4:38614973-38614992 | None:intergenic | 15.0% |
| !! | AAATAAATAAAAAAATCAGC+AGG | + | chr4_4:38615366-38615385 | None:intergenic | 15.0% |
| !! | ATAATACCAAACTTAAAATA+TGG | + | chr4_4:38616807-38616826 | None:intergenic | 15.0% |
| !! | CTATCTTCTCAAATTATTAT+CGG | + | chr4_4:38608062-38608081 | None:intergenic | 20.0% |
| !! | ATATTGATATGAATATTAGG+TGG | + | chr4_4:38608985-38609004 | None:intergenic | 20.0% |
| !!! | TGAATACTTAATTTTCCATT+TGG | - | chr4_4:38609065-38609084 | Msa0679950:intron | 20.0% |
| !! | CAGTGATATATTATATATTC+AGG | + | chr4_4:38609611-38609630 | None:intergenic | 20.0% |
| !!! | TTTATTGAAAATGATTTGCT+TGG | - | chr4_4:38610019-38610038 | Msa0679950:intron | 20.0% |
| !! | AAGAGAAGTCAAAATTAAAA+GGG | - | chr4_4:38611000-38611019 | Msa0679950:intron | 20.0% |
| !! | TAATACCTTTAAATCTTGAT+CGG | + | chr4_4:38611039-38611058 | None:intergenic | 20.0% |
| !! | CTATATATATGTTACAAGAA+GGG | - | chr4_4:38611318-38611337 | Msa0679950:intron | 20.0% |
| !! | AAAGATGAATGATGAAAATA+AGG | - | chr4_4:38611688-38611707 | Msa0679950:intron | 20.0% |
| !!! | ATCATTTTAAGTGAACTATT+TGG | - | chr4_4:38611919-38611938 | Msa0679950:intron | 20.0% |
| !!! | AAGCTAGAAATATTTTAATG+AGG | - | chr4_4:38612066-38612085 | Msa0679950:intron | 20.0% |
| !! | TTTCTTAAACTAATCTAACT+AGG | - | chr4_4:38612109-38612128 | Msa0679950:intron | 20.0% |
| !! | AACAGATTATACCAAAAATA+CGG | - | chr4_4:38612206-38612225 | Msa0679950:intron | 20.0% |
| !! | TGTAAGTATTATAGGTTATT+AGG | + | chr4_4:38612337-38612356 | None:intergenic | 20.0% |
| !!! | TATAAAGGTGTAAGTATTAT+AGG | + | chr4_4:38612345-38612364 | None:intergenic | 20.0% |
| !! | AAAGAATTACTGAAATTTAG+GGG | - | chr4_4:38612369-38612388 | Msa0679950:intron | 20.0% |
| !! | TGGAAAGTTATGAAAATAAA+CGG | + | chr4_4:38612399-38612418 | None:intergenic | 20.0% |
| !!! | TTTTATGTAAATTGTTCATG+TGG | + | chr4_4:38613232-38613251 | None:intergenic | 20.0% |
| !! | AGGTAATATCTATAACTATT+GGG | + | chr4_4:38613347-38613366 | None:intergenic | 20.0% |
| !! | AAGAGATAATATTCATTCAT+TGG | + | chr4_4:38613393-38613412 | None:intergenic | 20.0% |
| !! | TAATAAATAAATGAGAAGAG+GGG | + | chr4_4:38613794-38613813 | None:intergenic | 20.0% |
| !! | ATAAATTTGGTTATGAGAAT+TGG | - | chr4_4:38614023-38614042 | Msa0679950:intron | 20.0% |
| !! | TAAATTTGGTTATGAGAATT+GGG | - | chr4_4:38614024-38614043 | Msa0679950:intron | 20.0% |
| !! | ATGTCAAAATAGATTAACTT+TGG | - | chr4_4:38614584-38614603 | Msa0679950:intron | 20.0% |
| !! | TAAATATTAAATGAGATTGG+TGG | + | chr4_4:38614970-38614989 | None:intergenic | 20.0% |
| !! | TTACAAAAATCTATCATTTG+TGG | - | chr4_4:38614999-38615018 | Msa0679950:intron | 20.0% |
| !!! | TTCAATCATTTTATAATGCT+TGG | - | chr4_4:38615152-38615171 | Msa0679950:intron | 20.0% |
| !!! | TTCTTTTTCATGAATATTTG+AGG | + | chr4_4:38616384-38616403 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTGACCAAAACAA+GGG | + | chr4_4:38616491-38616510 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTTGACCAAAACA+AGG | + | chr4_4:38616492-38616511 | None:intergenic | 20.0% |
| !! | AAAAAATTCATAACCAGAAT+TGG | - | chr4_4:38616505-38616524 | Msa0679950:intron | 20.0% |
| !!! | TAGTAAAGTGTTTTTAAGAA+AGG | + | chr4_4:38616949-38616968 | None:intergenic | 20.0% |
| ! | TTGCTGCTATAACAATAATT+TGG | - | chr4_4:38607952-38607971 | Msa0679950:CDS | 25.0% |
| ! | CAGAAATACAATATTCAGTT+TGG | - | chr4_4:38608144-38608163 | Msa0679950:intron | 25.0% |
| !! | AGAATTTTCAGCTTTTATGA+TGG | - | chr4_4:38608498-38608517 | Msa0679950:intron | 25.0% |
| !!! | TTGGTTTGTTTCTTTTTGTT+TGG | - | chr4_4:38608892-38608911 | Msa0679950:intron | 25.0% |
| !!! | TTTTCCATTTGGTTTTTACA+AGG | - | chr4_4:38609076-38609095 | Msa0679950:intron | 25.0% |
| !!! | TTTCCATTTGGTTTTTACAA+GGG | - | chr4_4:38609077-38609096 | Msa0679950:intron | 25.0% |
| ! | CTACTCTTCTTAAAAGTTAA+AGG | + | chr4_4:38609261-38609280 | None:intergenic | 25.0% |
| !! | TTTTCATGTTCATGTGTTAT+GGG | - | chr4_4:38609757-38609776 | Msa0679950:CDS | 25.0% |
| ! | TTAGGAAATATGATAGTTCT+TGG | + | chr4_4:38610067-38610086 | None:intergenic | 25.0% |
| ! | AAGAACTATCATATTTCCTA+AGG | - | chr4_4:38610066-38610085 | Msa0679950:intron | 25.0% |
| ! | AGAACTATCATATTTCCTAA+GGG | - | chr4_4:38610067-38610086 | Msa0679950:intron | 25.0% |
| !!! | TTTAATTTTCCAATAGAGGA+GGG | + | chr4_4:38610184-38610203 | None:intergenic | 25.0% |
| !!! | TTTTAATTTTCCAATAGAGG+AGG | + | chr4_4:38610185-38610204 | None:intergenic | 25.0% |
| ! | ATCAAATTTCCTATTCCATT+GGG | + | chr4_4:38610328-38610347 | None:intergenic | 25.0% |
| ! | TACAACTTTCTAATCTAAAG+TGG | - | chr4_4:38610479-38610498 | Msa0679950:intron | 25.0% |
| ! | CTAATTGCAATTTCAACTTA+TGG | + | chr4_4:38610588-38610607 | None:intergenic | 25.0% |
| !!! | ATAAATTTTCAAGGTTTGGA+AGG | + | chr4_4:38610843-38610862 | None:intergenic | 25.0% |
| !!! | TCACTTGTTCCATTTAATTT+TGG | + | chr4_4:38610971-38610990 | None:intergenic | 25.0% |
| ! | AAATTAAATGGAACAAGTGA+AGG | - | chr4_4:38610971-38610990 | Msa0679950:intron | 25.0% |
| ! | CAAGAGAAGTCAAAATTAAA+AGG | - | chr4_4:38610999-38611018 | Msa0679950:intron | 25.0% |
| ! | AATACCTTTAAATCTTGATC+GGG | + | chr4_4:38611038-38611057 | None:intergenic | 25.0% |
| !!! | AATCCAATTTTTGAGCTATT+TGG | + | chr4_4:38611203-38611222 | None:intergenic | 25.0% |
| !!! | TTGGATTTTTGATTAGAACA+TGG | - | chr4_4:38611216-38611235 | Msa0679950:intron | 25.0% |
| !!! | ATTTTTGATTAGAACATGGT+AGG | - | chr4_4:38611220-38611239 | Msa0679950:intron | 25.0% |
| ! | GCTATATATATGTTACAAGA+AGG | - | chr4_4:38611317-38611336 | Msa0679950:intron | 25.0% |
| ! | TAATCCGAAAATGAAAAACA+AGG | - | chr4_4:38611365-38611384 | Msa0679950:intron | 25.0% |
| !!! | TGTTCCTTGTTTTTCATTTT+CGG | + | chr4_4:38611372-38611391 | None:intergenic | 25.0% |
| !!! | AAATGAGTTTTTCACTGATT+CGG | + | chr4_4:38611429-38611448 | None:intergenic | 25.0% |
| ! | ATAGAATCCAAAAACTTCAT+AGG | - | chr4_4:38611485-38611504 | Msa0679950:intron | 25.0% |
| !! | AAAAATGCCTATGAAGTTTT+TGG | + | chr4_4:38611495-38611514 | None:intergenic | 25.0% |
| !! | AACTGTGTTTGTTTCATTTT+AGG | - | chr4_4:38611763-38611782 | Msa0679950:intron | 25.0% |
| !!! | CTAGAAATATTTTAATGAGG+TGG | - | chr4_4:38612069-38612088 | Msa0679950:intron | 25.0% |
| ! | GGAAAGTTATGAAAATAAAC+GGG | + | chr4_4:38612398-38612417 | None:intergenic | 25.0% |
| ! | ATGAGATAGTTATACATATG+TGG | + | chr4_4:38612443-38612462 | None:intergenic | 25.0% |
| ! | ACTATGAACATTTAACTCAT+AGG | - | chr4_4:38612968-38612987 | Msa0679950:intron | 25.0% |
| ! | GTTCATAAAATACATGTTCA+AGG | - | chr4_4:38613064-38613083 | Msa0679950:intron | 25.0% |
| ! | CTATAGATATTCTACATAGT+TGG | + | chr4_4:38613195-38613214 | None:intergenic | 25.0% |
| ! | AAATTAGGTATGAAAGTAGT+GGG | + | chr4_4:38613311-38613330 | None:intergenic | 25.0% |
| !!! | GGATTTTTAAGACTGAAATT+AGG | + | chr4_4:38613326-38613345 | None:intergenic | 25.0% |
| ! | GAGGTAATATCTATAACTAT+TGG | + | chr4_4:38613348-38613367 | None:intergenic | 25.0% |
| ! | AACTAAGTATACAAGCTATT+AGG | - | chr4_4:38613445-38613464 | Msa0679950:intron | 25.0% |
| ! | ACTAAGTATACAAGCTATTA+GGG | - | chr4_4:38613446-38613465 | Msa0679950:intron | 25.0% |
| ! | AAATGACATAGAATTTCTGA+AGG | - | chr4_4:38613483-38613502 | Msa0679950:intron | 25.0% |
| !! | GAAATTAAGGGACAATTTTA+AGG | + | chr4_4:38613595-38613614 | None:intergenic | 25.0% |
| ! | TGATAAGAACAAAAGAGTTA+GGG | + | chr4_4:38613670-38613689 | None:intergenic | 25.0% |
| ! | AAAGAAAGAAAAGGAGAAAA+GGG | + | chr4_4:38613758-38613777 | None:intergenic | 25.0% |
| ! | AAAAGAAAGAAAAGGAGAAA+AGG | + | chr4_4:38613759-38613778 | None:intergenic | 25.0% |
| ! | AACGAAAGAAAAGAAAGAAA+AGG | + | chr4_4:38613767-38613786 | None:intergenic | 25.0% |
| !!! | TTTTTTGTGGTTGAGATAAA+TGG | - | chr4_4:38613822-38613841 | Msa0679950:intron | 25.0% |
| !! | TTTTTGTGGTTGAGATAAAT+GGG | - | chr4_4:38613823-38613842 | Msa0679950:intron | 25.0% |
| !! | TTTTTGCTTATAAATGTGAC+CGG | + | chr4_4:38613883-38613902 | None:intergenic | 25.0% |
| ! | AAATTTGGTTATGAGAATTG+GGG | - | chr4_4:38614025-38614044 | Msa0679950:intron | 25.0% |
| !!! | TCTTTTGTTGTAGCTTTTTT+TGG | + | chr4_4:38614080-38614099 | None:intergenic | 25.0% |
| !!! | GATGAATTTGAGTTTTTGAA+GGG | + | chr4_4:38614147-38614166 | None:intergenic | 25.0% |
| ! | GTTTAGGTCAGATATAATTA+TGG | + | chr4_4:38614169-38614188 | None:intergenic | 25.0% |
| ! | CTTGGTTATTTACATTGAAA+AGG | + | chr4_4:38614205-38614224 | None:intergenic | 25.0% |
| ! | TGAACTTAAAATAACCAAGT+AGG | - | chr4_4:38614521-38614540 | Msa0679950:intron | 25.0% |
| ! | TGGAATTTATAGATGAACTT+TGG | - | chr4_4:38614604-38614623 | Msa0679950:intron | 25.0% |
| ! | TTATGTTCATGATAACAAGT+TGG | - | chr4_4:38614665-38614684 | Msa0679950:intron | 25.0% |
| ! | TTAATTCCTCAAAAAAGACA+AGG | + | chr4_4:38614842-38614861 | None:intergenic | 25.0% |
| !! | TGTTCTTTATTTGCTAAAGT+CGG | - | chr4_4:38615280-38615299 | Msa0679950:intron | 25.0% |
| !!! | TTGATAGTTTTTTTCTGTAC+AGG | - | chr4_4:38615459-38615478 | Msa0679950:intron | 25.0% |
| ! | ATGATAAGACTAACTTTAGA+TGG | - | chr4_4:38615538-38615557 | Msa0679950:intron | 25.0% |
| ! | TTAAGATGAAGGAAATGATT+TGG | + | chr4_4:38615620-38615639 | None:intergenic | 25.0% |
| !!! | GAACTATTGTTTTAAGATGA+AGG | + | chr4_4:38615631-38615650 | None:intergenic | 25.0% |
| ! | AGTTTAACTATATTTGTGCT+TGG | - | chr4_4:38615811-38615830 | Msa0679950:intron | 25.0% |
| ! | TGTCAATCAATCATAATCAT+TGG | + | chr4_4:38616008-38616027 | None:intergenic | 25.0% |
| !! | AAGTCAGACATTTAAAGTTT+AGG | + | chr4_4:38616127-38616146 | None:intergenic | 25.0% |
| ! | TGTCATGAACAAATATTAAC+TGG | + | chr4_4:38616218-38616237 | None:intergenic | 25.0% |
| ! | CAATAATAGAGAATGCTAAA+TGG | + | chr4_4:38616456-38616475 | None:intergenic | 25.0% |
| !! | ATATTTTATCAACGACTTGT+TGG | - | chr4_4:38616651-38616670 | Msa0679950:intron | 25.0% |
| !!! | AACGATCCATATTTTAAGTT+TGG | - | chr4_4:38616798-38616817 | Msa0679950:intron | 25.0% |
| !!! | GTGTTTTTAAGAAAGGAATT+TGG | + | chr4_4:38616942-38616961 | None:intergenic | 25.0% |
| ! | TATAGAGACAATAAAGACTT+AGG | - | chr4_4:38617079-38617098 | Msa0679950:intron | 25.0% |
| !! | AATTTCCAGAAGAATTTTGA+AGG | - | chr4_4:38617107-38617126 | Msa0679950:CDS | 25.0% |
| ! | GAATTGAAAGGTGTAAGAAT+TGG | + | chr4_4:38607796-38607815 | None:intergenic | 30.0% |
| TTGGGAAAGAAGAAAATGAA+GGG | + | chr4_4:38607827-38607846 | None:intergenic | 30.0% | |
| AAGAGAGAAATGAAGAAAGA+TGG | + | chr4_4:38607929-38607948 | None:intergenic | 30.0% | |
| !! | TATTGTATTTCTGAAGCAGA+AGG | + | chr4_4:38608137-38608156 | None:intergenic | 30.0% |
| !! | AGAGCATTATATTTTCTCTG+TGG | - | chr4_4:38608214-38608233 | Msa0679950:intron | 30.0% |
| ! | ATGTCTTATTCCAGTAAGTT+GGG | - | chr4_4:38608265-38608284 | Msa0679950:intron | 30.0% |
| ! | TATTTCTTGTTCTTGTTTGC+AGG | - | chr4_4:38608666-38608685 | Msa0679950:CDS | 30.0% |
| !! | AAATGATAAAGGATTAGCCA+AGG | - | chr4_4:38609295-38609314 | Msa0679950:intron | 30.0% |
| !! | AATGATAAAGGATTAGCCAA+GGG | - | chr4_4:38609296-38609315 | Msa0679950:intron | 30.0% |
| ! | GAATTGAAAGGTGTAAGAAT+TGG | + | chr4_4:38607796-38607815 | None:intergenic | 30.0% |
| CAGAAATACACTATTCAGTT+CGG | - | chr4_4:38609573-38609592 | Msa0679950:intron | 30.0% | |
| ! | TTGAAAGTCCTTTTCAAAGA+GGG | + | chr4_4:38609729-38609748 | None:intergenic | 30.0% |
| ! | ATTGAAAGTCCTTTTCAAAG+AGG | + | chr4_4:38609730-38609749 | None:intergenic | 30.0% |
| ! | GTTTTCATGTTCATGTGTTA+TGG | - | chr4_4:38609756-38609775 | Msa0679950:CDS | 30.0% |
| !! | CTTCAAGATTTTGAAGACAT+GGG | - | chr4_4:38609872-38609891 | Msa0679950:intron | 30.0% |
| ! | TGAAGCTTTCTTGAACATTT+TGG | - | chr4_4:38610099-38610118 | Msa0679950:intron | 30.0% |
| GATCAAATTTCCTATTCCAT+TGG | + | chr4_4:38610329-38610348 | None:intergenic | 30.0% | |
| TCTTTAGATTGTCACAATCT+TGG | + | chr4_4:38610441-38610460 | None:intergenic | 30.0% | |
| ATCACTAAACACTCTAAGTT+GGG | + | chr4_4:38610556-38610575 | None:intergenic | 30.0% | |
| AATCACTAAACACTCTAAGT+TGG | + | chr4_4:38610557-38610576 | None:intergenic | 30.0% | |
| AACTTGTGAGTATTCCTAAA+TGG | - | chr4_4:38610662-38610681 | Msa0679950:intron | 30.0% | |
| TGGTATCTCGTAAATAATTC+AGG | + | chr4_4:38610880-38610899 | None:intergenic | 30.0% | |
| CAAGAGAAGCCAAAATTAAA+TGG | - | chr4_4:38610959-38610978 | Msa0679950:intron | 30.0% | |
| ATATCCCGATCAAGATTTAA+AGG | - | chr4_4:38611031-38611050 | Msa0679950:intron | 30.0% | |
| !! | CAATTTTTGAGCTATTTGGT+CGG | + | chr4_4:38611199-38611218 | None:intergenic | 30.0% |
| AATTGTTAGAGTGGTTAGTA+TGG | - | chr4_4:38611283-38611302 | Msa0679950:intron | 30.0% | |
| TGGTTGGATCTCAAAATATT+GGG | + | chr4_4:38611626-38611645 | None:intergenic | 30.0% | |
| TTGGTTGGATCTCAAAATAT+TGG | + | chr4_4:38611627-38611646 | None:intergenic | 30.0% | |
| !! | GTGTTTGTTTCATTTTAGGA+TGG | - | chr4_4:38611767-38611786 | Msa0679950:intron | 30.0% |
| !!! | TTCATTTTAGGATGGTGAAA+TGG | - | chr4_4:38611775-38611794 | Msa0679950:intron | 30.0% |
| TTAAACTAATCTAACTAGGC+AGG | - | chr4_4:38612113-38612132 | Msa0679950:intron | 30.0% | |
| ! | ATCTGTTGTTACCGTATTTT+TGG | + | chr4_4:38612220-38612239 | None:intergenic | 30.0% |
| GATAGTTATACATATGTGGT+TGG | + | chr4_4:38612439-38612458 | None:intergenic | 30.0% | |
| ! | CTACGAACAATTTAGTTCAT+AGG | - | chr4_4:38612833-38612852 | Msa0679950:intron | 30.0% |
| !! | GAACTAGCTTTAATACTATC+AGG | + | chr4_4:38613048-38613067 | None:intergenic | 30.0% |
| CATAAAATACATGTTCAAGG+TGG | - | chr4_4:38613067-38613086 | Msa0679950:intron | 30.0% | |
| AAGCTAACAAAATAAGGAAG+AGG | - | chr4_4:38613091-38613110 | Msa0679950:intron | 30.0% | |
| AGCTAACAAAATAAGGAAGA+GGG | - | chr4_4:38613092-38613111 | Msa0679950:intron | 30.0% | |
| !! | GGAGTAACTAAGTTATTTTG+TGG | + | chr4_4:38613174-38613193 | None:intergenic | 30.0% |
| GAAATTAGGTATGAAAGTAG+TGG | + | chr4_4:38613312-38613331 | None:intergenic | 30.0% | |
| CTGATAAGAACAAAAGAGTT+AGG | + | chr4_4:38613671-38613690 | None:intergenic | 30.0% | |
| AAGAAAGAAAAGGAGAAAAG+GGG | + | chr4_4:38613757-38613776 | None:intergenic | 30.0% | |
| ATGTATGCAGTCACATTTAT+AGG | - | chr4_4:38613931-38613950 | Msa0679950:intron | 30.0% | |
| !! | GGATGAATTTGAGTTTTTGA+AGG | + | chr4_4:38614148-38614167 | None:intergenic | 30.0% |
| ! | TGATTTTCTTGCAAATAGCT+TGG | + | chr4_4:38614223-38614242 | None:intergenic | 30.0% |
| ATGAAAAATGGACATGAACT+TGG | - | chr4_4:38614436-38614455 | Msa0679950:intron | 30.0% | |
| AAGGTCATATTAATCCTACT+TGG | + | chr4_4:38614538-38614557 | None:intergenic | 30.0% | |
| ! | TCATGATAACAAGTTGGATT+AGG | - | chr4_4:38614671-38614690 | Msa0679950:intron | 30.0% |
| TTGTGAAAATAGACGAACTT+TGG | - | chr4_4:38614759-38614778 | Msa0679950:intron | 30.0% | |
| !!! | ATTCATCCTTGTCTTTTTTG+AGG | - | chr4_4:38614833-38614852 | Msa0679950:intron | 30.0% |
| AACAATTGTGAGTAAAACGT+TGG | - | chr4_4:38615055-38615074 | Msa0679950:intron | 30.0% | |
| TATTTACTTGCCAAGAAAGA+AGG | + | chr4_4:38615128-38615147 | None:intergenic | 30.0% | |
| TTGATCAGTAACTATTGATC+TGG | - | chr4_4:38615330-38615349 | Msa0679950:intron | 30.0% | |
| GCAAAATAACAAACCTGAAA+AGG | + | chr4_4:38615754-38615773 | None:intergenic | 30.0% | |
| CAAAGTTTAGAAACTCTTTC+TGG | - | chr4_4:38616090-38616109 | Msa0679950:intron | 30.0% | |
| TCATAACCAGAATTGGTATA+AGG | - | chr4_4:38616512-38616531 | Msa0679950:intron | 30.0% | |
| ! | TCAAAAACCTCATTTTCTTG+AGG | - | chr4_4:38616711-38616730 | Msa0679950:intron | 30.0% |
| ! | CAAAAACCTCATTTTCTTGA+GGG | - | chr4_4:38616712-38616731 | Msa0679950:intron | 30.0% |
| ! | AGAAGAAAATGAAGGGGTTT+TGG | + | chr4_4:38607820-38607839 | None:intergenic | 35.0% |
| TGGGAAAGAAGAAAATGAAG+GGG | + | chr4_4:38607826-38607845 | None:intergenic | 35.0% | |
| GTTGGGAAAGAAGAAAATGA+AGG | + | chr4_4:38607828-38607847 | None:intergenic | 35.0% | |
| TGTAAGTAGAAAAAGCGGTT+GGG | + | chr4_4:38607845-38607864 | None:intergenic | 35.0% | |
| ! | TATCGGTGTCTAAGTATCAA+AGG | + | chr4_4:38608045-38608064 | None:intergenic | 35.0% |
| CAACTTACTGGAATAAGACA+TGG | + | chr4_4:38608266-38608285 | None:intergenic | 35.0% | |
| ! | CATGTCTTATTCCAGTAAGT+TGG | - | chr4_4:38608264-38608283 | Msa0679950:intron | 35.0% |
| ! | TGAAAATTCTGCTTCTAAGG+GGG | + | chr4_4:38608488-38608507 | None:intergenic | 35.0% |
| CTGAAAATTCTGCTTCTAAG+GGG | + | chr4_4:38608489-38608508 | None:intergenic | 35.0% | |
| GCTGAAAATTCTGCTTCTAA+GGG | + | chr4_4:38608490-38608509 | None:intergenic | 35.0% | |
| AGCTGAAAATTCTGCTTCTA+AGG | + | chr4_4:38608491-38608510 | None:intergenic | 35.0% | |
| TCTCTAGACATATCTGACTT+AGG | + | chr4_4:38608549-38608568 | None:intergenic | 35.0% | |
| ATACAAGCAATTGAACCATC+TGG | + | chr4_4:38608635-38608654 | None:intergenic | 35.0% | |
| AGACATAATAAAAGGAGGTG+GGG | + | chr4_4:38608776-38608795 | None:intergenic | 35.0% | |
| GAGACATAATAAAAGGAGGT+GGG | + | chr4_4:38608777-38608796 | None:intergenic | 35.0% | |
| AGAGACATAATAAAAGGAGG+TGG | + | chr4_4:38608778-38608797 | None:intergenic | 35.0% | |
| AGGAGAGACATAATAAAAGG+AGG | + | chr4_4:38608781-38608800 | None:intergenic | 35.0% | |
| ! | TCCTTTTATTATGTCTCTCC+TGG | - | chr4_4:38608780-38608799 | Msa0679950:intron | 35.0% |
| TCCAGGAGAGACATAATAAA+AGG | + | chr4_4:38608784-38608803 | None:intergenic | 35.0% | |
| TTATTATGTCTCTCCTGGAT+AGG | - | chr4_4:38608785-38608804 | Msa0679950:intron | 35.0% | |
| TATTATGTCTCTCCTGGATA+GGG | - | chr4_4:38608786-38608805 | Msa0679950:intron | 35.0% | |
| TTGTTTGGCACTTGATGTTT+AGG | - | chr4_4:38608907-38608926 | Msa0679950:intron | 35.0% | |
| TGTTTGGCACTTGATGTTTA+GGG | - | chr4_4:38608908-38608927 | Msa0679950:intron | 35.0% | |
| AATGCATTAAAACCAGGAGA+GGG | + | chr4_4:38608940-38608959 | None:intergenic | 35.0% | |
| AAATGCATTAAAACCAGGAG+AGG | + | chr4_4:38608941-38608960 | None:intergenic | 35.0% | |
| GCTAGAAATGCATTAAAACC+AGG | + | chr4_4:38608946-38608965 | None:intergenic | 35.0% | |
| CATCCCTTGTAAAAACCAAA+TGG | + | chr4_4:38609083-38609102 | None:intergenic | 35.0% | |
| CATAGATAGATGGATAGAAC+GGG | + | chr4_4:38609348-38609367 | None:intergenic | 35.0% | |
| GCATAGATAGATGGATAGAA+CGG | + | chr4_4:38609349-38609368 | None:intergenic | 35.0% | |
| GACAAATCTAATGCTATCCA+TGG | + | chr4_4:38607772-38607791 | None:intergenic | 35.0% | |
| TTGGGAAAGGAGAAAATGAA+GGG | + | chr4_4:38609434-38609453 | None:intergenic | 35.0% | |
| TGTAAGTAGAAAAAGCGGTT+GGG | + | chr4_4:38607845-38607864 | None:intergenic | 35.0% | |
| AAGTTACTAACCTGTAGTGA+TGG | + | chr4_4:38609517-38609536 | None:intergenic | 35.0% | |
| !! | TAGTGTATTTCTGAAGCAGA+AGG | + | chr4_4:38609566-38609585 | None:intergenic | 35.0% |
| CTGATTGCTAATATCTTCCA+AGG | + | chr4_4:38609822-38609841 | None:intergenic | 35.0% | |
| CCATGTCTTCAAAATCTTGA+AGG | + | chr4_4:38609874-38609893 | None:intergenic | 35.0% | |
| !! | CCTTCAAGATTTTGAAGACA+TGG | - | chr4_4:38609871-38609890 | Msa0679950:intron | 35.0% |
| !! | TCTTGAACATTTTGGCATCA+AGG | - | chr4_4:38610107-38610126 | Msa0679950:intron | 35.0% |
| ! | TTGCGGGTTTTACAGTTAAT+TGG | - | chr4_4:38610139-38610158 | Msa0679950:intron | 35.0% |
| GATACAAAGTTTGCAGATTC+TGG | + | chr4_4:38610276-38610295 | None:intergenic | 35.0% | |
| TTTGAAGGTTTATGCAACCA+TGG | + | chr4_4:38610300-38610319 | None:intergenic | 35.0% | |
| AACCTTCAAACATTACCCAA+TGG | - | chr4_4:38610310-38610329 | Msa0679950:intron | 35.0% | |
| TTCCATTGGGTAATGTTTGA+AGG | + | chr4_4:38610315-38610334 | None:intergenic | 35.0% | |
| CAAACATTACCCAATGGAAT+AGG | - | chr4_4:38610316-38610335 | Msa0679950:intron | 35.0% | |
| TAGGAAATTTGATCAGCCTA+CGG | - | chr4_4:38610335-38610354 | Msa0679950:intron | 35.0% | |
| AACTTTGCAATCTCTTTGTC+TGG | + | chr4_4:38610394-38610413 | None:intergenic | 35.0% | |
| TTGTGACAATCTAAAGACCT+TGG | - | chr4_4:38610444-38610463 | Msa0679950:intron | 35.0% | |
| TGGTTGAGAATTTCTTCTTG+TGG | - | chr4_4:38610499-38610518 | Msa0679950:intron | 35.0% | |
| GGTTGAGAATTTCTTCTTGT+GGG | - | chr4_4:38610500-38610519 | Msa0679950:intron | 35.0% | |
| ! | AGCAACTTCAGCTTTAACTT+CGG | + | chr4_4:38610622-38610641 | None:intergenic | 35.0% |
| TTAGGAATACTCACAAGTTG+TGG | + | chr4_4:38610661-38610680 | None:intergenic | 35.0% | |
| AGTATTCCTAAATGGTTGCA+AGG | - | chr4_4:38610670-38610689 | Msa0679950:intron | 35.0% | |
| TTCACAGTCAACAATATCCA+AGG | + | chr4_4:38610716-38610735 | None:intergenic | 35.0% | |
| ATCACACATCAAACAAGTGA+AGG | - | chr4_4:38610930-38610949 | Msa0679950:intron | 35.0% | |
| CGACCAAATAGCTCAAAAAT+TGG | - | chr4_4:38611197-38611216 | Msa0679950:intron | 35.0% | |
| AACAATGACCAAAAAACACG+AGG | - | chr4_4:38611250-38611269 | Msa0679950:intron | 35.0% | |
| GGTTAGTATGGTTCTTAAAC+TGG | - | chr4_4:38611295-38611314 | Msa0679950:intron | 35.0% | |
| !!! | TTACAAGAAGGGTGTTTTGT+GGG | - | chr4_4:38611329-38611348 | Msa0679950:intron | 35.0% |
| !! | TCATTTTTCACCCCAAAACA+GGG | - | chr4_4:38611443-38611462 | Msa0679950:intron | 35.0% |
| ! | TTTAGAATGCATGCTATCAG+CGG | - | chr4_4:38612041-38612060 | Msa0679950:intron | 35.0% |
| !!! | GTGACAATTGTGGCTTTTTT+TGG | + | chr4_4:38612247-38612266 | None:intergenic | 35.0% |
| AACTCATGATAAATTCAGCC+TGG | - | chr4_4:38612307-38612326 | Msa0679950:intron | 35.0% | |
| ! | ACCACATTATTTCTTCGTTG+TGG | - | chr4_4:38612588-38612607 | Msa0679950:intron | 35.0% |
| TACTATGAGTTGTACCTCAT+AGG | - | chr4_4:38612777-38612796 | Msa0679950:intron | 35.0% | |
| GGTGGAAAGCTAACAAAATA+AGG | - | chr4_4:38613085-38613104 | Msa0679950:intron | 35.0% | |
| CATAGATTTGTGATTTGAGC+TGG | + | chr4_4:38613416-38613435 | None:intergenic | 35.0% | |
| AGATATCGTGGTCTCAATTT+GGG | + | chr4_4:38613538-38613557 | None:intergenic | 35.0% | |
| AAGATATCGTGGTCTCAATT+TGG | + | chr4_4:38613539-38613558 | None:intergenic | 35.0% | |
| TTAGAACCTCAAAGATATCG+TGG | + | chr4_4:38613550-38613569 | None:intergenic | 35.0% | |
| !! | TTTGAGGTTCTAAGAGAAGA+TGG | - | chr4_4:38613557-38613576 | Msa0679950:intron | 35.0% |
| !!! | TAAGGGACAATTTTAAGGCT+AGG | + | chr4_4:38613590-38613609 | None:intergenic | 35.0% |
| AGGTCTTGCTAGGAAATTAA+GGG | + | chr4_4:38613607-38613626 | None:intergenic | 35.0% | |
| AAGGTCTTGCTAGGAAATTA+AGG | + | chr4_4:38613608-38613627 | None:intergenic | 35.0% | |
| GAAGAAGAAGAAGAAGATGA+AGG | + | chr4_4:38613627-38613646 | None:intergenic | 35.0% | |
| AAATAAATGAGAAGAGGGGA+AGG | + | chr4_4:38613790-38613809 | None:intergenic | 35.0% | |
| TTGTTCTATGTTACTCTCTC+CGG | - | chr4_4:38613861-38613880 | Msa0679950:intron | 35.0% | |
| CTCACAAAAGTCAAGTTTCA+AGG | + | chr4_4:38614557-38614576 | None:intergenic | 35.0% | |
| ! | GTTGGATTAGGATTGAATTG+AGG | - | chr4_4:38614683-38614702 | Msa0679950:intron | 35.0% |
| TGGTTATCATTGTCTTTGGA+TGG | + | chr4_4:38614950-38614969 | None:intergenic | 35.0% | |
| ! | TTGGTGGTTATCATTGTCTT+TGG | + | chr4_4:38614954-38614973 | None:intergenic | 35.0% |
| ! | TTCAAGTTTGCCTTCTTTCT+TGG | - | chr4_4:38615115-38615134 | Msa0679950:intron | 35.0% |
| !! | AAGAGAGGTATCATACAGAT+TGG | + | chr4_4:38615251-38615270 | None:intergenic | 35.0% |
| ATCAAAACATACATGCCTTG+AGG | + | chr4_4:38615315-38615334 | None:intergenic | 35.0% | |
| AGAATTACTACTTCTCTCTG+TGG | - | chr4_4:38615407-38615426 | Msa0679950:intron | 35.0% | |
| GAATTACTACTTCTCTCTGT+GGG | - | chr4_4:38615408-38615427 | Msa0679950:intron | 35.0% | |
| GAAGAAAGAACATGACTTAG+TGG | + | chr4_4:38615518-38615537 | None:intergenic | 35.0% | |
| AAACCACTATGGTAAGACAT+TGG | + | chr4_4:38615573-38615592 | None:intergenic | 35.0% | |
| TGGTGAAAGTTAAACCACTA+TGG | + | chr4_4:38615584-38615603 | None:intergenic | 35.0% | |
| ! | AATGATTTGGACTTACACCA+TGG | + | chr4_4:38615607-38615626 | None:intergenic | 35.0% |
| TAAGTGCGTAAAAAGAAGTC+TGG | - | chr4_4:38615671-38615690 | Msa0679950:intron | 35.0% | |
| ! | ATATTTGTGCCCATCTTTTC+AGG | - | chr4_4:38615703-38615722 | Msa0679950:intron | 35.0% |
| TTATAGCAGCCTGAAAAGAT+GGG | + | chr4_4:38615715-38615734 | None:intergenic | 35.0% | |
| AACTTATCGGAAGTGATGTT+TGG | + | chr4_4:38615856-38615875 | None:intergenic | 35.0% | |
| GTAAAAAATCTGCACACTGT+CGG | - | chr4_4:38616030-38616049 | Msa0679950:intron | 35.0% | |
| GTAGTAGAGGTTTAGAAAGA+AGG | + | chr4_4:38616151-38616170 | None:intergenic | 35.0% | |
| TCATGACAATTGCTCTTTGT+AGG | - | chr4_4:38616230-38616249 | Msa0679950:intron | 35.0% | |
| TGTTTCACTGGATATGTTGT+CGG | + | chr4_4:38616358-38616377 | None:intergenic | 35.0% | |
| TATTTGAGGAACTGTTTCAC+TGG | + | chr4_4:38616370-38616389 | None:intergenic | 35.0% | |
| !! | CATTCTCTTATCCCTTGTTT+TGG | - | chr4_4:38616477-38616496 | Msa0679950:intron | 35.0% |
| CTTTCTCGAAAGAATCACTA+AGG | + | chr4_4:38616546-38616565 | None:intergenic | 35.0% | |
| ATTCTTTCGAGAAAGCAATC+AGG | - | chr4_4:38616551-38616570 | Msa0679950:intron | 35.0% | |
| TTCTTTCGAGAAAGCAATCA+GGG | - | chr4_4:38616552-38616571 | Msa0679950:intron | 35.0% | |
| !!! | TTGGATTTTCAGGTAAACCT+TGG | - | chr4_4:38616670-38616689 | Msa0679950:intron | 35.0% |
| CTAAATCCCTCAAGAAAATG+AGG | + | chr4_4:38616721-38616740 | None:intergenic | 35.0% | |
| ATTCCTATCGTCTAACACAT+TGG | - | chr4_4:38616968-38616987 | Msa0679950:intron | 35.0% | |
| TTCGCTACATCCTCAAATAT+TGG | - | chr4_4:38617181-38617200 | Msa0679950:CDS | 35.0% | |
| CTGGTCATTTCCAATATTTG+AGG | + | chr4_4:38617194-38617213 | None:intergenic | 35.0% | |
| ATGTAAGTAGTGCTTAGTTC+CGG | + | chr4_4:38617223-38617242 | None:intergenic | 35.0% | |
| !!! | AGGGGTTTTGGAGAATTGAA+AGG | + | chr4_4:38607808-38607827 | None:intergenic | 40.0% |
| GTGTAAGTAGAAAAAGCGGT+TGG | + | chr4_4:38607846-38607865 | None:intergenic | 40.0% | |
| AAGCAGAAGGAACTACTCAT+CGG | + | chr4_4:38608124-38608143 | None:intergenic | 40.0% | |
| ! | CTTATTCCAGTAAGTTGGGT+CGG | - | chr4_4:38608269-38608288 | Msa0679950:intron | 40.0% |
| AGCATGATCACCTGAGAATA+TGG | - | chr4_4:38608386-38608405 | Msa0679950:CDS | 40.0% | |
| GCATGATCACCTGAGAATAT+GGG | - | chr4_4:38608387-38608406 | Msa0679950:CDS | 40.0% | |
| CATGATCACCTGAGAATATG+GGG | - | chr4_4:38608388-38608407 | Msa0679950:CDS | 40.0% | |
| ATAATAAAAGGAGGTGGGGA+GGG | + | chr4_4:38608772-38608791 | None:intergenic | 40.0% | |
| ACCAAAACAGCAAAAGGTGA+GGG | + | chr4_4:38608859-38608878 | None:intergenic | 40.0% | |
| !!! | AGGGGTTTTGGAGAATTGAA+AGG | + | chr4_4:38607808-38607827 | None:intergenic | 40.0% |
| ! | AGGAGAAAATGAAGGGGTTT+TGG | + | chr4_4:38609427-38609446 | None:intergenic | 40.0% |
| TGGGAAAGGAGAAAATGAAG+GGG | + | chr4_4:38609433-38609452 | None:intergenic | 40.0% | |
| GTTGGGAAAGGAGAAAATGA+AGG | + | chr4_4:38609435-38609454 | None:intergenic | 40.0% | |
| GTGTAAGTAGAAAAAGCGGT+TGG | + | chr4_4:38607846-38607865 | None:intergenic | 40.0% | |
| AGAAGGAAACTACGAGAAAG+GGG | + | chr4_4:38609549-38609568 | None:intergenic | 40.0% | |
| CAGAAGGAAACTACGAGAAA+GGG | + | chr4_4:38609550-38609569 | None:intergenic | 40.0% | |
| ! | TTGCTTCTCCCTCTTTGAAA+AGG | - | chr4_4:38609718-38609737 | Msa0679950:CDS | 40.0% |
| TCATGTTCATGTGTTATGGG+AGG | - | chr4_4:38609760-38609779 | Msa0679950:CDS | 40.0% | |
| TTTCTTCCACAACCAAACAG+AGG | - | chr4_4:38609791-38609810 | Msa0679950:CDS | 40.0% | |
| ! | GTTTTACCTCTGTTTGGTTG+TGG | + | chr4_4:38609800-38609819 | None:intergenic | 40.0% |
| ACCAAACAGAGGTAAAACCT+TGG | - | chr4_4:38609802-38609821 | Msa0679950:CDS | 40.0% | |
| ! | TCCAAGGTTTTACCTCTGTT+TGG | + | chr4_4:38609806-38609825 | None:intergenic | 40.0% |
| ATCAGTTTCTGCATGAGCTT+TGG | - | chr4_4:38609837-38609856 | Msa0679950:intron | 40.0% | |
| ATGATAGTTCTTGGACCAGT+AGG | + | chr4_4:38610058-38610077 | None:intergenic | 40.0% | |
| GTTCAAGAAAGCTTCATCGT+TGG | + | chr4_4:38610095-38610114 | None:intergenic | 40.0% | |
| CATCAAGGTGCAAATTCTTG+CGG | - | chr4_4:38610122-38610141 | Msa0679950:intron | 40.0% | |
| ATCAAGGTGCAAATTCTTGC+GGG | - | chr4_4:38610123-38610142 | Msa0679950:intron | 40.0% | |
| GGAGTTTGCACACTGAATTA+GGG | + | chr4_4:38610255-38610274 | None:intergenic | 40.0% | |
| TGGAGTTTGCACACTGAATT+AGG | + | chr4_4:38610256-38610275 | None:intergenic | 40.0% | |
| CTGCAAACTTTGTATCTCCA+TGG | - | chr4_4:38610280-38610299 | Msa0679950:intron | 40.0% | |
| TAGTTATAGATAGCTGCCGT+AGG | + | chr4_4:38610354-38610373 | None:intergenic | 40.0% | |
| !! | TAAAGACCTTGGTGCTTGAA+GGG | - | chr4_4:38610455-38610474 | Msa0679950:intron | 40.0% |
| ! | GCAACTTCAGCTTTAACTTC+GGG | + | chr4_4:38610621-38610640 | None:intergenic | 40.0% |
| ATCCAAGGTGAGTAATGTGT+CGG | + | chr4_4:38610701-38610720 | None:intergenic | 40.0% | |
| !! | ACAAGAGTTGATAACCACTC+AGG | + | chr4_4:38610754-38610773 | None:intergenic | 40.0% |
| TGTGGAAGCGAAAGCAATTT+CGG | + | chr4_4:38610808-38610827 | None:intergenic | 40.0% | |
| TTATTTACGAGATACCAGCC+TGG | - | chr4_4:38610883-38610902 | Msa0679950:intron | 40.0% | |
| ATGACCAAAAAACACGAGGA+TGG | - | chr4_4:38611254-38611273 | Msa0679950:intron | 40.0% | |
| TGACCAAAAAACACGAGGAT+GGG | - | chr4_4:38611255-38611274 | Msa0679950:intron | 40.0% | |
| TGGGGTTAGAATTGTTAGAG+TGG | - | chr4_4:38611274-38611293 | Msa0679950:intron | 40.0% | |
| !!! | GTTACAAGAAGGGTGTTTTG+TGG | - | chr4_4:38611328-38611347 | Msa0679950:intron | 40.0% |
| !! | AAGGAACACACCCTAGTTTT+TGG | - | chr4_4:38611384-38611403 | Msa0679950:intron | 40.0% |
| !!! | ACCCTAGTTTTTGGAGTGTT+CGG | - | chr4_4:38611393-38611412 | Msa0679950:intron | 40.0% |
| TCCGAACACTCCAAAAACTA+GGG | + | chr4_4:38611397-38611416 | None:intergenic | 40.0% | |
| ATCCGAACACTCCAAAAACT+AGG | + | chr4_4:38611398-38611417 | None:intergenic | 40.0% | |
| !! | CTCATTTTTCACCCCAAAAC+AGG | - | chr4_4:38611442-38611461 | Msa0679950:intron | 40.0% |
| ! | ATGAGTTTTCGCCCTGTTTT+GGG | + | chr4_4:38611457-38611476 | None:intergenic | 40.0% |
| ! | AATGAGTTTTCGCCCTGTTT+TGG | + | chr4_4:38611458-38611477 | None:intergenic | 40.0% |
| !! | CTAGAGGAGTATTCTTTGGT+TGG | + | chr4_4:38611642-38611661 | None:intergenic | 40.0% |
| !! | TGGACTAGAGGAGTATTCTT+TGG | + | chr4_4:38611646-38611665 | None:intergenic | 40.0% |
| ! | GAATGTTAAGCTTGGACTAG+AGG | + | chr4_4:38611658-38611677 | None:intergenic | 40.0% |
| AGTCCAAGCTTAACATTCCA+AGG | - | chr4_4:38611660-38611679 | Msa0679950:intron | 40.0% | |
| AAGCCTTGGAATGTTAAGCT+TGG | + | chr4_4:38611666-38611685 | None:intergenic | 40.0% | |
| TCATTCATCTTTCGAAGCCT+TGG | + | chr4_4:38611680-38611699 | None:intergenic | 40.0% | |
| TATAGGTTATTAGGCTTGCC+AGG | + | chr4_4:38612328-38612347 | None:intergenic | 40.0% | |
| ACCACATTATCTCTTCGTTG+TGG | - | chr4_4:38612552-38612571 | Msa0679950:intron | 40.0% | |
| GCCACAACGAAGAAATAATG+TGG | + | chr4_4:38612592-38612611 | None:intergenic | 40.0% | |
| TATTTCTTCGTTGTGGCGAA+CGG | - | chr4_4:38612595-38612614 | Msa0679950:intron | 40.0% | |
| ACCACATTATCTCTTCGTTG+TGG | - | chr4_4:38612552-38612571 | Msa0679950:intron | 40.0% | |
| ACCACATTATCTCTTCGTTG+TGG | - | chr4_4:38612552-38612571 | Msa0679950:intron | 40.0% | |
| ACCACAACGAAGAGATAATG+TGG | + | chr4_4:38612664-38612683 | None:intergenic | 40.0% | |
| TATCTCTTCGTTGTGGTGAA+CGG | - | chr4_4:38612667-38612686 | Msa0679950:intron | 40.0% | |
| ACCACATTATCTCTTCGTTG+TGG | - | chr4_4:38612552-38612571 | Msa0679950:intron | 40.0% | |
| ACCACAACGAAGAGATAATG+TGG | + | chr4_4:38612664-38612683 | None:intergenic | 40.0% | |
| TATCTCTTCGTTGTGGTGAA+TGG | - | chr4_4:38612667-38612686 | Msa0679950:intron | 40.0% | |
| ACCACATTATCTCTTCGTTG+TGG | - | chr4_4:38612552-38612571 | Msa0679950:intron | 40.0% | |
| ACCACAACGAAGAGATAATG+TGG | + | chr4_4:38612664-38612683 | None:intergenic | 40.0% | |
| TATCTCTTCGTTGTGGTGAA+CGG | - | chr4_4:38612667-38612686 | Msa0679950:intron | 40.0% | |
| AAGAGACAATGTAGCCTATG+AGG | + | chr4_4:38612794-38612813 | None:intergenic | 40.0% | |
| TGTCTCTTCGTTGTAGCAAA+CGG | - | chr4_4:38612806-38612825 | Msa0679950:intron | 40.0% | |
| TATCTCTTCGTTGCAGCAAA+CGG | - | chr4_4:38612862-38612881 | Msa0679950:intron | 40.0% | |
| TATCTCTTCGTTGTAGCGAA+CGG | - | chr4_4:38612997-38613016 | Msa0679950:intron | 40.0% | |
| CAATAGCTTAGAACTCTCTG+AGG | + | chr4_4:38613367-38613386 | None:intergenic | 40.0% | |
| ! | TTCTGAAGGAGAAGAAACCA+TGG | - | chr4_4:38613497-38613516 | Msa0679950:intron | 40.0% |
| GATATCGTGGTCTCAATTTG+GGG | + | chr4_4:38613537-38613556 | None:intergenic | 40.0% | |
| TTGAGACCACGATATCTTTG+AGG | - | chr4_4:38613541-38613560 | Msa0679950:intron | 40.0% | |
| AAGAAGATGAAGGTCTTGCT+AGG | + | chr4_4:38613617-38613636 | None:intergenic | 40.0% | |
| CTTCTTCTTCTTCAACTCCA+TGG | - | chr4_4:38613634-38613653 | Msa0679950:intron | 40.0% | |
| AAGAAAAGGAGAAAAGGGGA+AGG | + | chr4_4:38613753-38613772 | None:intergenic | 40.0% | |
| AGGACATTGCAAGTCAGTTT+AGG | + | chr4_4:38614185-38614204 | None:intergenic | 40.0% | |
| TTCGTTGTTGATGTGGAGAT+TGG | - | chr4_4:38614300-38614319 | Msa0679950:intron | 40.0% | |
| TCGTTGTTGATGTGGAGATT+GGG | - | chr4_4:38614301-38614320 | Msa0679950:intron | 40.0% | |
| AACACTCCTAATCTCCAAGT+AGG | + | chr4_4:38614387-38614406 | None:intergenic | 40.0% | |
| GTGAGTAAAACGTTGGAAAC+TGG | - | chr4_4:38615062-38615081 | Msa0679950:intron | 40.0% | |
| AGAACATACTGAGTCAAGAG+AGG | + | chr4_4:38615266-38615285 | None:intergenic | 40.0% | |
| TTGCCAATGTCTTACCATAG+TGG | - | chr4_4:38615567-38615586 | Msa0679950:intron | 40.0% | |
| ! | TGGTTTAACTTTCACCACCA+TGG | - | chr4_4:38615587-38615606 | Msa0679950:intron | 40.0% |
| ACGCACTTAGATAACATGTG+TGG | + | chr4_4:38615660-38615679 | None:intergenic | 40.0% | |
| CTTATAGCAGCCTGAAAAGA+TGG | + | chr4_4:38615716-38615735 | None:intergenic | 40.0% | |
| GCTGCTATAAGTTATGCGAT+TGG | - | chr4_4:38615725-38615744 | Msa0679950:intron | 40.0% | |
| CGCAGAAAAATTCGACAAGA+CGG | + | chr4_4:38615791-38615810 | None:intergenic | 40.0% | |
| CTAAACCTCTACTACATGTG+TGG | - | chr4_4:38616156-38616175 | Msa0679950:intron | 40.0% | |
| TTCATCCACACATGTAGTAG+AGG | + | chr4_4:38616164-38616183 | None:intergenic | 40.0% | |
| ACAAGCAACTGCATCGAAAA+CGG | + | chr4_4:38616311-38616330 | None:intergenic | 40.0% | |
| CATGTTGATACAAGAGCTGA+AGG | + | chr4_4:38616335-38616354 | None:intergenic | 40.0% | |
| CTCACTCCTTATACCAATTC+TGG | + | chr4_4:38616521-38616540 | None:intergenic | 40.0% | |
| CAGAATTGGTATAAGGAGTG+AGG | - | chr4_4:38616519-38616538 | Msa0679950:intron | 40.0% | |
| TCTTTCGAGAAAGCAATCAG+GGG | - | chr4_4:38616553-38616572 | Msa0679950:intron | 40.0% | |
| GTATAGCACTTTCATCTCCA+AGG | - | chr4_4:38616581-38616600 | Msa0679950:intron | 40.0% | |
| AAAGTCCATAAATTGCTGCC+GGG | + | chr4_4:38616615-38616634 | None:intergenic | 40.0% | |
| CAAAGTCCATAAATTGCTGC+CGG | + | chr4_4:38616616-38616635 | None:intergenic | 40.0% | |
| GGCAGCAATTTATGGACTTT+GGG | - | chr4_4:38616615-38616634 | Msa0679950:intron | 40.0% | |
| !!! | CAACGACTTGTTGGATTTTC+AGG | - | chr4_4:38616660-38616679 | Msa0679950:intron | 40.0% |
| ACACATGTTCGATGTTTCCA+AGG | + | chr4_4:38616690-38616709 | None:intergenic | 40.0% | |
| ATCTGTCCATTAATGCAGTC+AGG | - | chr4_4:38616758-38616777 | Msa0679950:intron | 40.0% | |
| GATCGTTCAATCTTGATCCA+AGG | + | chr4_4:38616785-38616804 | None:intergenic | 40.0% | |
| GTTGGTCGTTGGATCAAAAT+CGG | + | chr4_4:38616874-38616893 | None:intergenic | 40.0% | |
| TTATGCAGTCAGAACATCGT+TGG | + | chr4_4:38616892-38616911 | None:intergenic | 40.0% | |
| GTAGACAAACATCCCAAACA+TGG | + | chr4_4:38617035-38617054 | None:intergenic | 40.0% | |
| CTCAGCCTTCAAAATTCTTC+TGG | + | chr4_4:38617115-38617134 | None:intergenic | 40.0% | |
| !! | CAGAAGAATTTTGAAGGCTG+AGG | - | chr4_4:38617113-38617132 | Msa0679950:CDS | 40.0% |
| !! | AAGAATTTTGAAGGCTGAGG+TGG | - | chr4_4:38617116-38617135 | Msa0679950:CDS | 40.0% |
| ATAGTGTGATCTGCTGAACA+TGG | + | chr4_4:38617159-38617178 | None:intergenic | 40.0% | |
| ! | GGGGGTGTAAGTAGAAAAAG+CGG | + | chr4_4:38607850-38607869 | None:intergenic | 45.0% |
| TCTCAGTGATGAAACAGAGG+GGG | + | chr4_4:38607868-38607887 | None:intergenic | 45.0% | |
| CTCTCAGTGATGAAACAGAG+GGG | + | chr4_4:38607869-38607888 | None:intergenic | 45.0% | |
| GCTCTCAGTGATGAAACAGA+GGG | + | chr4_4:38607870-38607889 | None:intergenic | 45.0% | |
| AGCTCTCAGTGATGAAACAG+AGG | + | chr4_4:38607871-38607890 | None:intergenic | 45.0% | |
| GCTACTACTGCTACTACTAC+AGG | - | chr4_4:38607900-38607919 | Msa0679950:CDS | 45.0% | |
| CATCACATCCCCATATTCTC+AGG | + | chr4_4:38608399-38608418 | None:intergenic | 45.0% | |
| ! | TTCTGCTTCTAAGGGGGTTA+AGG | + | chr4_4:38608482-38608501 | None:intergenic | 45.0% |
| ! | GATGGCCATTGAAAAAGCAC+AGG | - | chr4_4:38608516-38608535 | Msa0679950:intron | 45.0% |
| !!! | CAGCTCCTGTGCTTTTTCAA+TGG | + | chr4_4:38608524-38608543 | None:intergenic | 45.0% |
| !! | GAAAGCATTAACCACCTGGA+TGG | + | chr4_4:38608578-38608597 | None:intergenic | 45.0% |
| !! | TGCTGAAAGCATTAACCACC+TGG | + | chr4_4:38608582-38608601 | None:intergenic | 45.0% |
| AATGCTTTCAGCAAGCACAC+TGG | - | chr4_4:38608589-38608608 | Msa0679950:intron | 45.0% | |
| ! | TTCTTGTTTGCAGGTGCTCA+GGG | - | chr4_4:38608675-38608694 | Msa0679950:CDS | 45.0% |
| TGGCCATGTTCTCTACTCAA+TGG | - | chr4_4:38608743-38608762 | Msa0679950:intron | 45.0% | |
| CCACCATTGAGTAGAGAACA+TGG | + | chr4_4:38608749-38608768 | None:intergenic | 45.0% | |
| CCATGTTCTCTACTCAATGG+TGG | - | chr4_4:38608746-38608765 | Msa0679950:intron | 45.0% | |
| CATAATAAAAGGAGGTGGGG+AGG | + | chr4_4:38608773-38608792 | None:intergenic | 45.0% | |
| TCCTGGATAGGGACAGATTA+GGG | - | chr4_4:38608797-38608816 | Msa0679950:intron | 45.0% | |
| CCAAAACAGCAAAAGGTGAG+GGG | + | chr4_4:38608858-38608877 | None:intergenic | 45.0% | |
| CACCAAAACAGCAAAAGGTG+AGG | + | chr4_4:38608860-38608879 | None:intergenic | 45.0% | |
| !!! | ACCTTTTGCTGTTTTGGTGC+TGG | - | chr4_4:38608861-38608880 | Msa0679950:intron | 45.0% |
| !!! | CCTTTTGCTGTTTTGGTGCT+GGG | - | chr4_4:38608862-38608881 | Msa0679950:intron | 45.0% |
| !!! | CTTTTGCTGTTTTGGTGCTG+GGG | - | chr4_4:38608863-38608882 | Msa0679950:intron | 45.0% |
| !!! | TTTGGTGCTGGGGTTTTGTT+TGG | - | chr4_4:38608873-38608892 | Msa0679950:intron | 45.0% |
| ! | GCACTTGATGTTTAGGGTTC+AGG | - | chr4_4:38608914-38608933 | Msa0679950:intron | 45.0% |
| ATTAGCCAAGGGAGTGAGTA+GGG | - | chr4_4:38609307-38609326 | Msa0679950:intron | 45.0% | |
| GTAGAAAAAGCGGTTGGGAA+AGG | + | chr4_4:38607840-38607859 | None:intergenic | 45.0% | |
| ! | GGGGGTGTAAGTAGAAAAAG+CGG | + | chr4_4:38607850-38607869 | None:intergenic | 45.0% |
| TCTCAGTGATGAAACAGAGG+GGG | + | chr4_4:38607868-38607887 | None:intergenic | 45.0% | |
| CTCTCAGTGATGAAACAGAG+GGG | + | chr4_4:38607869-38607888 | None:intergenic | 45.0% | |
| GCTCTCAGTGATGAAACAGA+GGG | + | chr4_4:38607870-38607889 | None:intergenic | 45.0% | |
| AGCTCTCAGTGATGAAACAG+AGG | + | chr4_4:38607871-38607890 | None:intergenic | 45.0% | |
| ACTACTACTGCCATCACTAC+AGG | - | chr4_4:38609504-38609523 | Msa0679950:intron | 45.0% | |
| GCAGAAGGAAACTACGAGAA+AGG | + | chr4_4:38609551-38609570 | None:intergenic | 45.0% | |
| ! | GACCAGTAGGAATTGGTGTT+TGG | + | chr4_4:38610045-38610064 | None:intergenic | 45.0% |
| GTTCTTGGACCAGTAGGAAT+TGG | + | chr4_4:38610052-38610071 | None:intergenic | 45.0% | |
| GTTTGCACACTGAATTAGGG+AGG | + | chr4_4:38610252-38610271 | None:intergenic | 45.0% | |
| !! | CTAAAGACCTTGGTGCTTGA+AGG | - | chr4_4:38610454-38610473 | Msa0679950:intron | 45.0% |
| TTGTATCCCTTCAAGCACCA+AGG | + | chr4_4:38610464-38610483 | None:intergenic | 45.0% | |
| GCACATCCTTGCAACCATTT+AGG | + | chr4_4:38610679-38610698 | None:intergenic | 45.0% | |
| ATCTTGATGAGCTTCCTGAG+TGG | - | chr4_4:38610737-38610756 | Msa0679950:intron | 45.0% | |
| GACCAAAAAACACGAGGATG+GGG | - | chr4_4:38611256-38611275 | Msa0679950:intron | 45.0% | |
| !!! | AACCCCATCCTCGTGTTTTT+TGG | + | chr4_4:38611261-38611280 | None:intergenic | 45.0% |
| ! | TGAGTTTTCGCCCTGTTTTG+GGG | + | chr4_4:38611456-38611475 | None:intergenic | 45.0% |
| ! | AATTGTCACGACCCACCTTT+TGG | - | chr4_4:38612258-38612277 | Msa0679950:intron | 45.0% |
| GCCACAACGAAGAGATAATG+TGG | + | chr4_4:38612556-38612575 | None:intergenic | 45.0% | |
| TATCTCTTCGTTGTGGCGAA+CGG | - | chr4_4:38612559-38612578 | Msa0679950:intron | 45.0% | |
| ATTTCTTCGTTGTGGCGAAC+GGG | - | chr4_4:38612596-38612615 | Msa0679950:intron | 45.0% | |
| GCCACAACGAAGAGATAATG+TGG | + | chr4_4:38612556-38612575 | None:intergenic | 45.0% | |
| ACTATGAGCGCGTTACTCAT+AGG | - | chr4_4:38612900-38612919 | Msa0679950:intron | 45.0% | |
| AAAAGGAGAAAAGGGGAAGG+CGG | + | chr4_4:38613750-38613769 | None:intergenic | 45.0% | |
| TGCAGTCACATTTATAGGCC+AGG | - | chr4_4:38613936-38613955 | Msa0679950:intron | 45.0% | |
| AGCTCTCTTCGTTGTTGATG+TGG | - | chr4_4:38614293-38614312 | Msa0679950:intron | 45.0% | |
| TTGACTTCCTCGATCCTACT+TGG | - | chr4_4:38614370-38614389 | Msa0679950:intron | 45.0% | |
| CTAATCTCCAAGTAGGATCG+AGG | + | chr4_4:38614380-38614399 | None:intergenic | 45.0% | |
| CTCGATCCTACTTGGAGATT+AGG | - | chr4_4:38614378-38614397 | Msa0679950:intron | 45.0% | |
| TGAGTCTTGCTCTGTTGTCT+AGG | + | chr4_4:38615206-38615225 | None:intergenic | 45.0% | |
| AGTCGGTAACACTTACCTCA+AGG | - | chr4_4:38615297-38615316 | Msa0679950:intron | 45.0% | |
| CTACTTCTCTCTGTGGGTAT+TGG | - | chr4_4:38615414-38615433 | Msa0679950:intron | 45.0% | |
| !! | TCTCTCTGTGGGTATTGGAT+TGG | - | chr4_4:38615419-38615438 | Msa0679950:intron | 45.0% |
| !! | CTCTCTGTGGGTATTGGATT+GGG | - | chr4_4:38615420-38615439 | Msa0679950:intron | 45.0% |
| ! | GGTATTGGATTGGGTTGTAG+CGG | - | chr4_4:38615429-38615448 | Msa0679950:intron | 45.0% |
| GATTTGGACTTACACCATGG+TGG | + | chr4_4:38615604-38615623 | None:intergenic | 45.0% | |
| ! | ATGCGATTGGAGTCCTTTTC+AGG | - | chr4_4:38615738-38615757 | Msa0679950:intron | 45.0% |
| CGGCAGCAATTTATGGACTT+TGG | - | chr4_4:38616614-38616633 | Msa0679950:intron | 45.0% | |
| CAAGGTCCTGACTGCATTAA+TGG | + | chr4_4:38616767-38616786 | None:intergenic | 45.0% | |
| CATTAATGCAGTCAGGACCT+TGG | - | chr4_4:38616765-38616784 | Msa0679950:intron | 45.0% | |
| CGACCAATGTGTTAGACGAT+AGG | + | chr4_4:38616974-38616993 | None:intergenic | 45.0% | |
| ACAAACATCCCAAACATGGC+TGG | + | chr4_4:38617031-38617050 | None:intergenic | 45.0% | |
| !!! | TTTTTATAATATTTTGTTTT+TGG | - | chr4_4:38608336-38608355 | Msa0679950:intron | 5.0% |
| !!! | TTGAATTTTTTTTTTTTTTA+AGG | + | chr4_4:38609208-38609227 | None:intergenic | 5.0% |
| !!! | TATTATTTTTTTTTTTTTTG+TGG | - | chr4_4:38613809-38613828 | Msa0679950:intron | 5.0% |
| ATGTAGCCGACCCAACTTAC+TGG | + | chr4_4:38608278-38608297 | None:intergenic | 50.0% | |
| ! | TCTAGAGACTGACTCCATCC+AGG | - | chr4_4:38608561-38608580 | Msa0679950:intron | 50.0% |
| ! | GTTCTTGTTTGCAGGTGCTC+AGG | - | chr4_4:38608674-38608693 | Msa0679950:CDS | 50.0% |
| GCTGATGCCTTAGCCAAGAA+TGG | - | chr4_4:38608712-38608731 | Msa0679950:intron | 50.0% | |
| CTCCTGGATAGGGACAGATT+AGG | - | chr4_4:38608796-38608815 | Msa0679950:intron | 50.0% | |
| !!! | CCCCTCACCTTTTGCTGTTT+TGG | - | chr4_4:38608855-38608874 | Msa0679950:intron | 50.0% |
| CCCAGCACCAAAACAGCAAA+AGG | + | chr4_4:38608865-38608884 | None:intergenic | 50.0% | |
| ! | GATTAGCCAAGGGAGTGAGT+AGG | - | chr4_4:38609306-38609325 | Msa0679950:intron | 50.0% |
| GGCAGCACAGCATAGATAGA+TGG | + | chr4_4:38609358-38609377 | None:intergenic | 50.0% | |
| CTATCTATGCTGTGCTGCCA+TGG | - | chr4_4:38609359-38609378 | Msa0679950:intron | 50.0% | |
| !! | CATGTGTTATGGGAGGCACT+TGG | - | chr4_4:38609767-38609786 | Msa0679950:CDS | 50.0% |
| GGCCAAACACCAATTCCTAC+TGG | - | chr4_4:38610040-38610059 | Msa0679950:intron | 50.0% | |
| GAGAGTTTGCCCTCCTCTAT+TGG | - | chr4_4:38610172-38610191 | Msa0679950:intron | 50.0% | |
| TGCCGACACATTACTCACCT+TGG | - | chr4_4:38610696-38610715 | Msa0679950:intron | 50.0% | |
| GGAAGGCAATGTGTGTCTTG+TGG | + | chr4_4:38610826-38610845 | None:intergenic | 50.0% | |
| AGAGTGCGCGAGAAATGAAC+AGG | - | chr4_4:38611536-38611555 | Msa0679950:intron | 50.0% | |
| GAGTGCGCGAGAAATGAACA+GGG | - | chr4_4:38611537-38611556 | Msa0679950:intron | 50.0% | |
| AAGGTGGGTCGTGACAATTG+TGG | + | chr4_4:38612257-38612276 | None:intergenic | 50.0% | |
| ATCTCTTCGTTGTGGCGAAC+AGG | - | chr4_4:38612560-38612579 | Msa0679950:intron | 50.0% | |
| GTTAGGGCTGCAACTAACCA+TGG | + | chr4_4:38613654-38613673 | None:intergenic | 50.0% | |
| AGAGGTTGCGAGAGAGAAGA+AGG | + | chr4_4:38613714-38613733 | None:intergenic | 50.0% | |
| GAGAAAGCAATCAGGGGTAG+CGG | - | chr4_4:38616559-38616578 | Msa0679950:intron | 50.0% | |
| ATCTCCAAGGCTTGTGATCC+CGG | - | chr4_4:38616594-38616613 | Msa0679950:intron | 50.0% | |
| GTGATCCCGGCAGCAATTTA+TGG | - | chr4_4:38616607-38616626 | Msa0679950:intron | 50.0% | |
| GTCAGAACATCGTTGGTCGT+TGG | + | chr4_4:38616885-38616904 | None:intergenic | 50.0% | |
| AGCTTGTGCCAGCCATGTTT+GGG | - | chr4_4:38617020-38617039 | Msa0679950:intron | 50.0% | |
| TGGAAATGACCAGCTGCATC+CGG | - | chr4_4:38617201-38617220 | Msa0679950:CDS | 50.0% | |
| ! | AGAGACTGACTCCATCCAGG+TGG | - | chr4_4:38608564-38608583 | Msa0679950:intron | 55.0% |
| GCAAGCACACTGGAGTTCCA+TGG | - | chr4_4:38608599-38608618 | Msa0679950:intron | 55.0% | |
| ! | CATCTGGCTCGCATCTTCCA+TGG | + | chr4_4:38608619-38608638 | None:intergenic | 55.0% |
| CATGGAAGATGCGAGCCAGA+TGG | - | chr4_4:38608617-38608636 | Msa0679950:CDS | 55.0% | |
| TGTTTGCAGGTGCTCAGGGA+AGG | - | chr4_4:38608679-38608698 | Msa0679950:CDS | 55.0% | |
| TGCCTTAGCCAAGAATGGCC+AGG | - | chr4_4:38608717-38608736 | Msa0679950:intron | 55.0% | |
| GCCTTAGCCAAGAATGGCCA+GGG | - | chr4_4:38608718-38608737 | Msa0679950:intron | 55.0% | |
| ACCCTGGCCATTCTTGGCTA+AGG | + | chr4_4:38608722-38608741 | None:intergenic | 55.0% | |
| TAGAGAACATGGCCAGACCC+TGG | + | chr4_4:38608738-38608757 | None:intergenic | 55.0% | |
| GCCCTAATCTGTCCCTATCC+AGG | + | chr4_4:38608801-38608820 | None:intergenic | 55.0% | |
| CAAGGGAGTGAGTAGGGTGA+GGG | - | chr4_4:38609313-38609332 | Msa0679950:intron | 55.0% | |
| AAGGGAGTGAGTAGGGTGAG+GGG | - | chr4_4:38609314-38609333 | Msa0679950:intron | 55.0% | |
| !! | GCTTCATCGTTGGCTCCCTT+AGG | + | chr4_4:38610085-38610104 | None:intergenic | 55.0% |
| ACGAGATACCAGCCTGGAGT+CGG | - | chr4_4:38610889-38610908 | Msa0679950:intron | 55.0% | |
| AATCATGTCCGACTCCAGGC+TGG | + | chr4_4:38610900-38610919 | None:intergenic | 55.0% | |
| AGCCTGGAGTCGGACATGAT+TGG | - | chr4_4:38610899-38610918 | Msa0679950:intron | 55.0% | |
| TGCCAATCATGTCCGACTCC+AGG | + | chr4_4:38610904-38610923 | None:intergenic | 55.0% | |
| ! | ACCCACCTTTTGGCCATGAC+CGG | - | chr4_4:38612268-38612287 | Msa0679950:intron | 55.0% |
| ! | GTTAGTGTTAGCCTGTGCGC+CGG | + | chr4_4:38612290-38612309 | None:intergenic | 55.0% |
| GGGAGTCACTGTTCAAGCCA+TGG | + | chr4_4:38613517-38613536 | None:intergenic | 55.0% | |
| GGCGGAAGGACAACAATGAG+AGG | + | chr4_4:38613732-38613751 | None:intergenic | 55.0% | |
| ACATGGCTGGCACAAGCTGA+GGG | + | chr4_4:38617018-38617037 | None:intergenic | 55.0% | |
| AACATGGCTGGCACAAGCTG+AGG | + | chr4_4:38617019-38617038 | None:intergenic | 55.0% | |
| CAGCTTGTGCCAGCCATGTT+TGG | - | chr4_4:38617019-38617038 | Msa0679950:intron | 55.0% | |
| TGCTTAGTTCCGGATGCAGC+TGG | + | chr4_4:38617213-38617232 | None:intergenic | 55.0% | |
| AGCCAAGAATGGCCAGGGTC+TGG | - | chr4_4:38608723-38608742 | Msa0679950:intron | 60.0% | |
| TTAGGGTTCAGGCCCTCTCC+TGG | - | chr4_4:38608925-38608944 | Msa0679950:intron | 60.0% | |
| CCTCACCCTACTCACTCCCT+TGG | + | chr4_4:38609315-38609334 | None:intergenic | 60.0% | |
| CCAAGGGAGTGAGTAGGGTG+AGG | - | chr4_4:38609312-38609331 | Msa0679950:intron | 60.0% | |
| AGGGAGTGAGTAGGGTGAGG+GGG | - | chr4_4:38609315-38609334 | Msa0679950:intron | 60.0% | |
| GTGAGTAGGGTGAGGGGGTA+AGG | - | chr4_4:38609320-38609339 | Msa0679950:intron | 60.0% | |
| GCCGGTCATGGCCAAAAGGT+GGG | + | chr4_4:38612272-38612291 | None:intergenic | 60.0% | |
| GGAGAAAAGGGGAAGGCGGA+AGG | + | chr4_4:38613746-38613765 | None:intergenic | 60.0% | |
| GGCCAGACCCTGGCCATTCT+TGG | + | chr4_4:38608728-38608747 | None:intergenic | 65.0% | |
| CGCCGGTCATGGCCAAAAGG+TGG | + | chr4_4:38612273-38612292 | None:intergenic | 65.0% | |
| ! | GTGCGCCGGTCATGGCCAAA+AGG | + | chr4_4:38612276-38612295 | None:intergenic | 65.0% |
| TTTGGCCATGACCGGCGCAC+AGG | - | chr4_4:38612276-38612295 | Msa0679950:intron | 65.0% | |
| ! | GTTAGCCTGTGCGCCGGTCA+TGG | + | chr4_4:38612284-38612303 | None:intergenic | 65.0% |
| GCTGCCGGGATCACAAGCCT+TGG | + | chr4_4:38616601-38616620 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 38607771 | 38617251 | 38607771 | ID=Msa0679950;Name=Msa0679950 |
| chr4_4 | mRNA | 38607771 | 38617251 | 38607771 | ID=Msa0679950-mRNA-1;Parent=Msa0679950;Name=Msa0679950-mRNA-1;_AED=0.46;_eAED=0.54;_QI=0|0.4|0.5|1|0.6|0.66|6|125|207 |
| chr4_4 | exon | 38607771 | 38608000 | 38607771 | ID=Msa0679950-mRNA-1:exon:9129;Parent=Msa0679950-mRNA-1 |
| chr4_4 | exon | 38608383 | 38608500 | 38608383 | ID=Msa0679950-mRNA-1:exon:9128;Parent=Msa0679950-mRNA-1 |
| chr4_4 | exon | 38608610 | 38608699 | 38608610 | ID=Msa0679950-mRNA-1:exon:9127;Parent=Msa0679950-mRNA-1 |
| chr4_4 | exon | 38609263 | 38609297 | 38609263 | ID=Msa0679950-mRNA-1:exon:9126;Parent=Msa0679950-mRNA-1 |
| chr4_4 | exon | 38609700 | 38609824 | 38609700 | ID=Msa0679950-mRNA-1:exon:9125;Parent=Msa0679950-mRNA-1 |
| chr4_4 | exon | 38617101 | 38617251 | 38617101 | ID=Msa0679950-mRNA-1:exon:9124;Parent=Msa0679950-mRNA-1 |
| chr4_4 | CDS | 38617101 | 38617251 | 38617101 | ID=Msa0679950-mRNA-1:cds;Parent=Msa0679950-mRNA-1 |
| chr4_4 | CDS | 38609700 | 38609824 | 38609700 | ID=Msa0679950-mRNA-1:cds;Parent=Msa0679950-mRNA-1 |
| chr4_4 | CDS | 38609263 | 38609297 | 38609263 | ID=Msa0679950-mRNA-1:cds;Parent=Msa0679950-mRNA-1 |
| chr4_4 | CDS | 38608610 | 38608699 | 38608610 | ID=Msa0679950-mRNA-1:cds;Parent=Msa0679950-mRNA-1 |
| chr4_4 | CDS | 38608383 | 38608500 | 38608383 | ID=Msa0679950-mRNA-1:cds;Parent=Msa0679950-mRNA-1 |
| chr4_4 | CDS | 38607896 | 38608000 | 38607896 | ID=Msa0679950-mRNA-1:cds;Parent=Msa0679950-mRNA-1 |
| chr4_4 | three_prime_UTR | 38607771 | 38607895 | 38607771 | ID=Msa0679950-mRNA-1:three_prime_utr;Parent=Msa0679950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
