AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0680500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0680500 MtrunA17_Chr4g0026521 91.186 295 23 1 1 292 1 295 6.61e-177 489
Msa0680500 MtrunA17_Chr2g0321291 68.730 307 70 9 5 290 6 307 6.46e-134 381
Msa0680500 MtrunA17_Chr2g0328921 63.830 235 77 2 36 263 53 286 7.03e-109 318
Msa0680500 MtrunA17_Chr8g0352011 66.063 221 61 4 72 279 110 329 5.58e-105 309
Msa0680500 MtrunA17_Chr1g0173841 61.355 251 67 6 64 287 137 384 7.26e-105 310
Msa0680500 MtrunA17_Chr7g0258011 54.710 276 91 5 43 287 73 345 4.98e-104 307
Msa0680500 MtrunA17_Chr5g0422571 64.977 217 63 4 75 288 65 271 3.37e-103 303
Msa0680500 MtrunA17_Chr4g0053341 59.821 224 80 2 43 263 6 222 2.35e-96 283
Msa0680500 MtrunA17_Chr1g0198651 73.410 173 40 3 103 269 89 261 3.21e-95 283
Msa0680500 MtrunA17_Chr1g0200421 38.415 164 89 6 122 277 245 404 5.37e-26 107
Msa0680500 MtrunA17_Chr2g0320341 35.329 167 98 7 115 274 231 394 4.17e-23 97.8
Msa0680500 MtrunA17_Chr4g0029521 35.366 164 89 5 105 259 36 191 2.84e-20 90.5
Msa0680500 MtrunA17_Chr1g0181381 34.932 146 86 4 115 259 54 191 5.91e-20 89.7
Msa0680500 MtrunA17_Chr2g0326381 31.818 176 109 4 98 269 31 199 5.92e-20 89.0
Msa0680500 MtrunA17_Chr8g0382121 38.129 139 79 5 130 263 127 263 1.05e-19 87.4
Msa0680500 MtrunA17_Chr1g0151351 35.461 141 82 4 120 259 62 194 2.27e-19 87.8
Msa0680500 MtrunA17_Chr7g0263941 36.054 147 82 6 115 259 50 186 3.36e-19 87.0
Msa0680500 MtrunA17_Chr3g0123941 36.810 163 91 7 130 288 139 293 3.54e-19 86.3
Msa0680500 MtrunA17_Chr1g0185121 34.694 147 85 5 115 259 56 193 4.19e-19 87.0
Msa0680500 MtrunA17_Chr7g0268961 35.252 139 80 4 122 259 45 174 5.80e-19 86.7
Msa0680500 MtrunA17_Chr8g0373541 32.558 172 98 7 97 259 23 185 6.92e-19 86.7
Msa0680500 MtrunA17_Chr1g0191991 35.714 140 78 5 122 259 86 215 1.68e-18 85.5
Msa0680500 MtrunA17_Chr8g0342421 30.435 184 108 7 86 259 41 214 2.26e-18 85.1
Msa0680500 MtrunA17_Chr2g0330171 31.707 164 100 5 98 259 45 198 4.01e-18 84.0
Msa0680500 MtrunA17_Chr1g0210821 34.014 147 85 5 115 259 60 196 6.44e-18 83.6
Msa0680500 MtrunA17_Chr1g0199101 31.902 163 99 6 99 259 47 199 8.05e-18 83.6
Msa0680500 MtrunA17_Chr3g0141431 33.129 163 91 5 105 257 20 174 1.49e-17 82.0
Msa0680500 MtrunA17_Chr1g0162971 35.000 140 79 5 122 259 64 193 2.40e-17 81.6
Msa0680500 MtrunA17_Chr2g0324991 34.507 142 83 5 115 254 8 141 3.12e-17 77.0
Msa0680500 MtrunA17_Chr1g0163001 33.333 147 86 5 115 259 59 195 6.47e-17 80.9
Msa0680500 MtrunA17_Chr4g0040571 31.507 146 90 4 115 259 55 191 4.95e-16 78.2
Msa0680500 MtrunA17_Chr8g0375521 30.935 139 85 5 120 255 48 178 1.59e-12 67.4
Msa0680500 MtrunA17_Chr6g0479921 27.607 163 106 5 122 282 52 204 2.32e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0680500 AT1G08290.1 53.776 331 89 8 9 282 12 335 1.50e-110 323
Msa0680500 AT1G51220.1 51.408 284 107 4 11 263 30 313 1.14e-100 298
Msa0680500 AT3G57670.1 79.518 166 31 2 112 277 201 363 1.60e-100 300
Msa0680500 AT3G20880.1 73.184 179 44 1 110 288 238 412 1.28e-99 298
Msa0680500 AT1G13290.1 70.157 191 48 4 75 263 55 238 8.77e-97 287
Msa0680500 AT1G34790.1 61.009 218 74 3 76 285 85 299 1.49e-91 274
Msa0680500 AT1G34370.3 39.735 151 79 5 122 263 28 175 9.85e-27 106
Msa0680500 AT1G34370.2 39.735 151 79 5 122 263 238 385 5.35e-26 107
Msa0680500 AT1G34370.1 39.735 151 79 5 122 263 238 385 5.35e-26 107
Msa0680500 AT5G22890.1 36.196 163 95 5 104 259 195 355 7.16e-24 100
Msa0680500 AT5G03150.1 32.317 164 100 5 98 259 52 206 4.04e-20 90.5
Msa0680500 AT5G66730.1 35.461 141 81 4 120 259 53 184 1.47e-19 89.0
Msa0680500 AT1G55110.3 31.098 164 102 5 98 259 62 216 4.81e-19 87.0
Msa0680500 AT1G55110.1 31.098 164 102 5 98 259 62 216 4.81e-19 87.0
Msa0680500 AT1G55110.2 31.098 164 102 5 98 259 62 216 4.81e-19 87.0
Msa0680500 AT5G60470.1 36.691 139 79 4 122 259 58 188 6.34e-19 86.7
Msa0680500 AT5G60470.3 35.971 139 80 4 122 259 63 193 1.06e-18 86.3
Msa0680500 AT5G60470.2 35.971 139 80 4 122 259 67 197 1.10e-18 86.3
Msa0680500 AT5G44160.1 29.282 181 115 5 83 259 18 189 2.04e-18 85.5
Msa0680500 AT3G45260.2 35.971 139 80 4 122 259 62 192 2.63e-18 85.1
Msa0680500 AT3G45260.1 35.971 139 80 4 122 259 62 192 2.63e-18 85.1
Msa0680500 AT2G02080.1 30.864 162 102 4 99 259 54 206 3.86e-18 84.7
Msa0680500 AT2G02080.4 30.864 162 102 4 99 259 54 206 3.86e-18 84.7
Msa0680500 AT2G02080.5 30.864 162 102 4 99 259 54 206 3.86e-18 84.7
Msa0680500 AT2G02080.3 30.864 162 102 4 99 259 54 206 3.86e-18 84.7
Msa0680500 AT1G14580.1 31.902 163 99 5 99 259 53 205 4.24e-18 84.3
Msa0680500 AT1G14580.2 31.902 163 99 5 99 259 53 205 4.24e-18 84.3
Msa0680500 AT2G02070.2 31.481 162 101 4 99 259 52 204 4.63e-18 84.7
Msa0680500 AT2G02070.1 31.481 162 101 4 99 259 52 204 4.63e-18 84.7
Msa0680500 AT1G14580.3 31.902 163 99 5 99 259 67 219 4.79e-18 84.3
Msa0680500 AT3G13810.5 30.864 162 103 4 99 259 65 218 9.36e-18 83.6
Msa0680500 AT1G03840.1 32.515 163 100 5 98 259 40 193 1.02e-17 83.6
Msa0680500 AT3G13810.6 31.481 162 102 4 99 259 51 204 1.05e-17 83.2
Msa0680500 AT3G13810.4 30.864 162 103 4 99 259 70 223 1.07e-17 83.6
Msa0680500 AT3G13810.1 30.864 162 103 4 99 259 70 223 1.07e-17 83.6
Msa0680500 AT3G13810.3 33.562 146 88 4 115 259 73 210 1.14e-17 83.2
Msa0680500 AT3G13810.2 33.562 146 88 4 115 259 87 224 1.17e-17 83.2
Msa0680500 AT2G02080.6 35.821 134 76 4 127 259 5 129 1.40e-17 82.8
Msa0680500 AT2G02080.2 35.821 134 76 4 127 259 5 129 1.40e-17 82.8
Msa0680500 AT3G50700.1 33.562 146 87 4 115 259 50 186 1.65e-17 82.8
Msa0680500 AT4G02670.1 34.247 146 87 4 115 259 69 206 2.21e-17 82.0
Msa0680500 AT4G02670.2 34.247 146 87 4 115 259 71 208 2.27e-17 82.0
Msa0680500 AT1G03840.2 34.247 146 86 5 115 259 55 191 2.51e-17 82.4
Msa0680500 AT5G44160.2 33.094 139 83 4 122 259 21 150 3.79e-17 81.6
Msa0680500 AT1G68130.1 29.870 154 94 5 120 266 62 208 5.31e-13 69.3
Msa0680500 AT1G25250.1 28.986 138 90 4 120 255 31 162 1.82e-12 67.4
Msa0680500 AT1G25250.3 28.986 138 90 4 120 255 54 185 2.81e-12 67.0
Msa0680500 AT2G01940.1 30.216 139 86 5 120 255 65 195 2.67e-11 64.3

Find 72 sgRNAs with CRISPR-Local

Find 247 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATAAAATTAATAATTAATT+TGG 0.048160 4_4:-39577040 None:intergenic
AAAGATCATATTAGGTCTTT+TGG 0.190747 4_4:+39580926 Msa0680500:CDS
GAAAACTTTGCACTCAAAAT+AGG 0.197503 4_4:-39577251 None:intergenic
CCATGCTACTGTTGTGTTCA+AGG 0.271424 4_4:+39580686 Msa0680500:CDS
GAGGAGAAGGGATGTGTTAC+TGG 0.312071 4_4:+39580995 Msa0680500:CDS
AAACTTCTTCTCATGAAGAT+AGG 0.335592 4_4:-39577375 None:intergenic
GATCTCTCAAAGATCATATT+AGG 0.336377 4_4:+39580918 Msa0680500:CDS
GAGACTGTGGCTTTGCATAT+TGG 0.342224 4_4:+39577332 Msa0680500:CDS
ATAAAATTAATAATTAATTT+GGG 0.347784 4_4:-39577039 None:intergenic
TATGATTGAGAGGAATTAGA+TGG 0.353434 4_4:-39577167 None:intergenic
CTTACATACAGAAATCCTTT+TGG 0.368821 4_4:-39581506 None:intergenic
ACTCATCAAGGTAAAGAGTA+TGG 0.382063 4_4:+39577094 Msa0680500:exon
CATGTTGTTATACCTATTGA+AGG 0.383480 4_4:-39577519 None:intergenic
AACTCAAAACCCTCAATTTG+TGG 0.388963 4_4:-39577296 None:intergenic
TCTTTCAAAGGCTTAGCTCT+TGG 0.410923 4_4:-39580731 None:intergenic
CATTTGCTGTCAAAGGTGAT+TGG 0.415877 4_4:+39580828 Msa0680500:CDS
TGTGTGCCTCTTAGTGAGTC+TGG 0.423624 4_4:-39580641 None:intergenic
ATTTAGAAATGCTAGATACT+TGG 0.425305 4_4:-39581050 None:intergenic
AAAAGAATTGTGGCAAGTTA+TGG 0.431308 4_4:+39580861 Msa0680500:CDS
ACTCCTGCTCAGATCCTTGT+TGG 0.433316 4_4:+39577461 Msa0680500:CDS
TATGCAACAAAACCTTCAAT+AGG 0.434246 4_4:+39577507 Msa0680500:CDS
TTCTGTTTGGAAATCATTGT+CGG 0.441591 4_4:+39581562 Msa0680500:three_prime_UTR
GCGTGAAGTGCCACAAATTG+AGG 0.454416 4_4:+39577286 Msa0680500:CDS
GGTAAAGAGTATGGCTATGA+TGG 0.462532 4_4:+39577103 Msa0680500:exon
GTTTAGCTACCGAGCACTTA+GGG 0.466130 4_4:+39581298 Msa0680500:three_prime_UTR
TGTTTAGCTACCGAGCACTT+AGG 0.480389 4_4:+39581297 Msa0680500:three_prime_UTR
GAAACCAAGCACTTATATGA+TGG 0.481094 4_4:-39577071 None:intergenic
GAGTTGGTATCCAAAACCTT+TGG 0.485962 4_4:-39577442 None:intergenic
CCATTTATGTGTAGAAAATG+TGG 0.488125 4_4:+39580800 Msa0680500:CDS
GGTAGCCTTAGCATTGCAGC+TGG 0.491825 4_4:-39580665 None:intergenic
CGTGAAGTGCCACAAATTGA+GGG 0.493265 4_4:+39577287 Msa0680500:CDS
TTCATCTACTTCACCACTTG+AGG 0.496683 4_4:-39581393 None:intergenic
CAAACCATCATATAAGTGCT+TGG 0.500864 4_4:+39577067 Msa0680500:five_prime_UTR
CACTGAAAAGTGATTAAACT+CGG 0.515713 4_4:-39581209 None:intergenic
TCAAGCTTTCGAAGAGGAGA+AGG 0.518310 4_4:+39580982 Msa0680500:CDS
AAGTTATGGTATTGCACTTG+TGG 0.518903 4_4:+39580875 Msa0680500:CDS
GTGCTTGGTTTCACTCATCA+AGG 0.520374 4_4:+39577082 Msa0680500:five_prime_UTR
TTTCTTCTTCTTCTTTAACA+TGG 0.521689 4_4:-39577400 None:intergenic
GCTATCATATATATCTATAG+AGG 0.526082 4_4:+39581330 Msa0680500:three_prime_UTR
TTTCCATTAGATGCATATGT+GGG 0.526101 4_4:+39580592 Msa0680500:intron
TTGCTGTCAAAGGTGATTGG+AGG 0.526560 4_4:+39580831 Msa0680500:CDS
TTATCCGCTTCATTACCAAA+AGG 0.529018 4_4:+39581491 Msa0680500:three_prime_UTR
CACAACCAGCTGCAATGCTA+AGG 0.533499 4_4:+39580660 Msa0680500:CDS
AGAGTTCTAAAGTCTTTCAA+AGG 0.540762 4_4:-39580743 None:intergenic
ATAAATACGGTTACCTCAAG+TGG 0.541228 4_4:+39581380 Msa0680500:three_prime_UTR
TGGTATCCAAAACCTTTGGA+AGG 0.554935 4_4:-39577438 None:intergenic
GGTCCAACAAGGATCTGAGC+AGG 0.564499 4_4:-39577464 None:intergenic
AGGACAATAATTTCATTGAG+TGG 0.566958 4_4:+39577138 Msa0680500:CDS
TCCATTAGATGCATATGTGG+GGG 0.571799 4_4:+39580594 Msa0680500:intron
ACAAGGATCTGAGCAGGAGT+TGG 0.574558 4_4:-39577458 None:intergenic
AAAGGACCAGACTCACTAAG+AGG 0.575770 4_4:+39580635 Msa0680500:CDS
TTTCTTCTCATAGTAATAGA+GGG 0.590684 4_4:+39581417 Msa0680500:three_prime_UTR
TTCCATTAGATGCATATGTG+GGG 0.605042 4_4:+39580593 Msa0680500:intron
CATTTATGTGTAGAAAATGT+GGG 0.610048 4_4:+39580801 Msa0680500:CDS
TTCTCATAGTAATAGAGGGT+AGG 0.610282 4_4:+39581421 Msa0680500:three_prime_UTR
TTGTATAGTTTCATTTCGAG+TGG 0.612164 4_4:-39577222 None:intergenic
ACTCACTACAAAAGAAAACA+TGG 0.615968 4_4:+39580770 Msa0680500:CDS
TGAAGTTAGATATGATTGAG+AGG 0.617034 4_4:-39577177 None:intergenic
CAAGCTTTCGAAGAGGAGAA+GGG 0.617403 4_4:+39580983 Msa0680500:CDS
AAAGCTTGATCATCAATCGA+AGG 0.619722 4_4:-39580968 None:intergenic
CAAATTGCATAGGTCCAACA+AGG 0.619822 4_4:-39577475 None:intergenic
CAATAGGTATAACAACATGC+AGG 0.621278 4_4:+39577523 Msa0680500:CDS
ATGGAGCAAGCAAATTGCAT+AGG 0.622517 4_4:-39577485 None:intergenic
AGGACTCATGAAAAGAATTG+TGG 0.623632 4_4:+39580851 Msa0680500:CDS
GGGAAAACATTTGCTGTCAA+AGG 0.623807 4_4:+39580821 Msa0680500:CDS
TCATCACTACCCTAAGTGCT+CGG 0.626424 4_4:-39581307 None:intergenic
CATGGATCTGAATTTAGGAA+AGG 0.631532 4_4:+39580617 Msa0680500:CDS
TGATGATCAAGCTTTCGAAG+AGG 0.631618 4_4:+39580976 Msa0680500:CDS
CATTATCAATAATATTGCTG+AGG 0.632429 4_4:+39581260 Msa0680500:three_prime_UTR
ATATTGCTGAGGCATGAACA+TGG 0.643082 4_4:+39581271 Msa0680500:three_prime_UTR
TATGATGGAGTGTGATGTAG+AGG 0.658485 4_4:+39577118 Msa0680500:CDS
CCTTGAACACAACAGTAGCA+TGG 0.671135 4_4:-39580686 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATTAATAATTAATTT+GGG - chr4_4:39577042-39577061 None:intergenic 0.0%
!! AATAAAATTAATAATTAATT+TGG - chr4_4:39577043-39577062 None:intergenic 0.0%
!! ATAATTAATTTAAATTAATA+AGG - chr4_4:39577872-39577891 None:intergenic 0.0%
!! ATAATTAATTTAAATTAATA+AGG - chr4_4:39577872-39577891 None:intergenic 0.0%
!!! AATTTTAATTTTAATAAATA+CGG + chr4_4:39581367-39581386 Msa0680500:three_prime_UTR 0.0%
!! ATTCATGAAATTTAATTAAA+AGG - chr4_4:39577556-39577575 None:intergenic 10.0%
!! ACTACTAAAAAAAATAAATT+AGG + chr4_4:39577662-39577681 Msa0680500:intron 10.0%
!! TAAATTAATAAGGTTAAAAT+TGG - chr4_4:39577862-39577881 None:intergenic 10.0%
!! TAGTTATTAATTATGAATAT+GGG - chr4_4:39577943-39577962 None:intergenic 10.0%
!! TATTGAATATAAAAACTATA+AGG + chr4_4:39578687-39578706 Msa0680500:intron 10.0%
!!! AACTGATTTTTTTAAATAAA+AGG - chr4_4:39578859-39578878 None:intergenic 10.0%
!! ATATAAATATAAATAAATGG+AGG + chr4_4:39579985-39580004 Msa0680500:intron 10.0%
!! TATAAATATAAATAAATGGA+GGG + chr4_4:39579986-39580005 Msa0680500:intron 10.0%
!! AATTAATTAGTATAATCAAA+AGG - chr4_4:39580101-39580120 None:intergenic 10.0%
!!! TGCATTTTTTTTTTTTTTAT+GGG - chr4_4:39580508-39580527 None:intergenic 10.0%
!!! ATGCATTTTTTTTTTTTTTA+TGG - chr4_4:39580509-39580528 None:intergenic 10.0%
!! GTAGTTATTAATTATGAATA+TGG - chr4_4:39577944-39577963 None:intergenic 15.0%
!! ATCATGAAAAAAAGAAAAAA+GGG - chr4_4:39578069-39578088 None:intergenic 15.0%
!! AATCATGAAAAAAAGAAAAA+AGG - chr4_4:39578070-39578089 None:intergenic 15.0%
!! TCATAAATACATTTATCATT+TGG + chr4_4:39578268-39578287 Msa0680500:intron 15.0%
!! CATAAATACATTTATCATTT+GGG + chr4_4:39578269-39578288 Msa0680500:intron 15.0%
!! TAAATATAAAATGACGTAAA+AGG - chr4_4:39578386-39578405 None:intergenic 15.0%
!!! AAGGCAAATTTTAATTATAA+GGG + chr4_4:39578796-39578815 Msa0680500:intron 15.0%
!!! ATTTGAAGTAAACAAATTAA+GGG - chr4_4:39579300-39579319 None:intergenic 15.0%
!!! AATTTGAAGTAAACAAATTA+AGG - chr4_4:39579301-39579320 None:intergenic 15.0%
!!! ATATTCTCCTTTTTTTTTAT+AGG + chr4_4:39579428-39579447 Msa0680500:intron 15.0%
!!! TTCAAAAAGTTAATTTTTCA+TGG + chr4_4:39579618-39579637 Msa0680500:intron 15.0%
!!! TCAAAAAGTTAATTTTTCAT+GGG + chr4_4:39579619-39579638 Msa0680500:intron 15.0%
!! TTAATTGTATATATTATGAG+AGG + chr4_4:39580115-39580134 Msa0680500:intron 15.0%
!! TGAAAGATTAACAAAATTAT+TGG + chr4_4:39580232-39580251 Msa0680500:intron 15.0%
!! TGGAAAAATATTTATTAAGT+TGG - chr4_4:39580578-39580597 None:intergenic 15.0%
!!! ATCTCTAATTTTTTCACTAA+GGG - chr4_4:39578573-39578592 None:intergenic 20.0%
!!! TATCTCTAATTTTTTCACTA+AGG - chr4_4:39578574-39578593 None:intergenic 20.0%
!!! CAAGGCAAATTTTAATTATA+AGG + chr4_4:39578795-39578814 Msa0680500:intron 20.0%
!! AAAAAAAAACTATAAATGGG+AGG + chr4_4:39579015-39579034 Msa0680500:intron 20.0%
!! CAAATAGCCTATAAAAAAAA+AGG - chr4_4:39579438-39579457 None:intergenic 20.0%
!! ATATTGCAATTGTATTATGT+AGG - chr4_4:39579484-39579503 None:intergenic 20.0%
!!! ATTAACTTTTTGAAAGTGAA+GGG - chr4_4:39579612-39579631 None:intergenic 20.0%
!!! AATTAACTTTTTGAAAGTGA+AGG - chr4_4:39579613-39579632 None:intergenic 20.0%
!!! TTATTGTGTTAGAACTTTTT+TGG + chr4_4:39579696-39579715 Msa0680500:intron 20.0%
!!! TATTGTGTTAGAACTTTTTT+GGG + chr4_4:39579697-39579716 Msa0680500:intron 20.0%
!!! ACATTTTTCATATCAATTTC+CGG - chr4_4:39579819-39579838 None:intergenic 20.0%
!!! TGAAGATCAATTTTATTTCT+TGG + chr4_4:39579876-39579895 Msa0680500:intron 20.0%
!! AAGAAAACAAAACAAAACTT+TGG + chr4_4:39580070-39580089 Msa0680500:intron 20.0%
!!! TTGTTTTATTTCAACATTCA+TGG + chr4_4:39580158-39580177 Msa0680500:intron 20.0%
!!! TGTTTTATTTCAACATTCAT+GGG + chr4_4:39580159-39580178 Msa0680500:intron 20.0%
!! AAAATTATTGGCAACAATTA+TGG + chr4_4:39580244-39580263 Msa0680500:intron 20.0%
!!! GCTTGAAGATTATTTTTTTA+TGG + chr4_4:39580295-39580314 Msa0680500:intron 20.0%
!!! TATGGTCTAATTTTAAAGTA+AGG + chr4_4:39580313-39580332 Msa0680500:intron 20.0%
!!! ATGGTCTAATTTTAAAGTAA+GGG + chr4_4:39580314-39580333 Msa0680500:intron 20.0%
!!! ACTTTGATAAATTTTCTGTT+TGG + chr4_4:39581549-39581568 Msa0680500:three_prime_UTR 20.0%
! TTTCTTCTTCTTCTTTAACA+TGG - chr4_4:39577403-39577422 None:intergenic 25.0%
!! TTTTTCTTTACAAGTAACTG+AGG - chr4_4:39577623-39577642 None:intergenic 25.0%
! CAGTTACTTGTAAAGAAAAA+TGG + chr4_4:39577623-39577642 Msa0680500:intron 25.0%
! AAAATAAATTAGGCTGTGTT+TGG + chr4_4:39577672-39577691 Msa0680500:intron 25.0%
! TCATAATTAATAACTACCCA+CGG + chr4_4:39577947-39577966 Msa0680500:intron 25.0%
! GTTAACAAAATATAAACCGT+GGG - chr4_4:39577966-39577985 None:intergenic 25.0%
! TGTTAACAAAATATAAACCG+TGG - chr4_4:39577967-39577986 None:intergenic 25.0%
! TTCGTAAGTAAATTTAGTGA+GGG - chr4_4:39578609-39578628 None:intergenic 25.0%
!! AAAAGGTATAGTTGAAAGAA+AGG - chr4_4:39578842-39578861 None:intergenic 25.0%
! CTTTGTGTTTGTAAAATTCA+TGG - chr4_4:39579397-39579416 None:intergenic 25.0%
!! CATTTTTCATATCAATTTCC+GGG - chr4_4:39579818-39579837 None:intergenic 25.0%
!!! ACGTTTTAAAGACTTAGTAA+TGG - chr4_4:39579850-39579869 None:intergenic 25.0%
! TTTGTTAATCTTTCACTGAT+GGG - chr4_4:39580227-39580246 None:intergenic 25.0%
!! TTTTGTTAATCTTTCACTGA+TGG - chr4_4:39580228-39580247 None:intergenic 25.0%
! TCATATAGGTCAAATAATTC+AGG + chr4_4:39580267-39580286 Msa0680500:intron 25.0%
! CATTTATGTGTAGAAAATGT+GGG + chr4_4:39580801-39580820 Msa0680500:CDS 25.0%
!! AAAGATCATATTAGGTCTTT+TGG + chr4_4:39580926-39580945 Msa0680500:CDS 25.0%
! ATTTAGAAATGCTAGATACT+TGG - chr4_4:39581053-39581072 None:intergenic 25.0%
! CATTATCAATAATATTGCTG+AGG + chr4_4:39581260-39581279 Msa0680500:three_prime_UTR 25.0%
! GCTATCATATATATCTATAG+AGG + chr4_4:39581330-39581349 Msa0680500:three_prime_UTR 25.0%
!! TTTTCTTCTCATAGTAATAG+AGG + chr4_4:39581416-39581435 Msa0680500:three_prime_UTR 25.0%
! TTTCTTCTCATAGTAATAGA+GGG + chr4_4:39581417-39581436 Msa0680500:three_prime_UTR 25.0%
!!! TTTTTTTTATCCCTCTTCAT+TGG + chr4_4:39581461-39581480 Msa0680500:three_prime_UTR 25.0%
!! TAAATTTTCTCCAATGAAGA+GGG - chr4_4:39581474-39581493 None:intergenic 25.0%
!! ATAAATTTTCTCCAATGAAG+AGG - chr4_4:39581475-39581494 None:intergenic 25.0%
AGGACAATAATTTCATTGAG+TGG + chr4_4:39577138-39577157 Msa0680500:CDS 30.0%
TATGATTGAGAGGAATTAGA+TGG - chr4_4:39577170-39577189 None:intergenic 30.0%
TGAAGTTAGATATGATTGAG+AGG - chr4_4:39577180-39577199 None:intergenic 30.0%
TTGTATAGTTTCATTTCGAG+TGG - chr4_4:39577225-39577244 None:intergenic 30.0%
GAAAACTTTGCACTCAAAAT+AGG - chr4_4:39577254-39577273 None:intergenic 30.0%
! TTTGAGTGCAAAGTTTTCAA+AGG + chr4_4:39577256-39577275 Msa0680500:CDS 30.0%
AAACTTCTTCTCATGAAGAT+AGG - chr4_4:39577378-39577397 None:intergenic 30.0%
!!! CTTTGGAAGGTTTTTTTAGA+AGG - chr4_4:39577428-39577447 None:intergenic 30.0%
! CTTCTAAAAAAACCTTCCAA+AGG + chr4_4:39577426-39577445 Msa0680500:CDS 30.0%
! AAAAAACCTTCCAAAGGTTT+TGG + chr4_4:39577432-39577451 Msa0680500:CDS 30.0%
!!! ATTGAAGGTTTTGTTGCATA+TGG - chr4_4:39577507-39577526 None:intergenic 30.0%
TATGCAACAAAACCTTCAAT+AGG + chr4_4:39577507-39577526 Msa0680500:CDS 30.0%
CATGTTGTTATACCTATTGA+AGG - chr4_4:39577522-39577541 None:intergenic 30.0%
TTGATAGAATAAGACGTGTT+TGG + chr4_4:39577746-39577765 Msa0680500:intron 30.0%
AAAAAAAGAAAAAAGGGCAG+TGG - chr4_4:39578063-39578082 None:intergenic 30.0%
CTTCGTAAGTAAATTTAGTG+AGG - chr4_4:39578610-39578629 None:intergenic 30.0%
CTCACTAAATTTACTTACGA+AGG + chr4_4:39578608-39578627 Msa0680500:intron 30.0%
TAAAAACTATAAGGTCTAGC+AGG + chr4_4:39578696-39578715 Msa0680500:intron 30.0%
ATAGATTAGCACCTACATTT+AGG + chr4_4:39579324-39579343 Msa0680500:intron 30.0%
AAAGGAGAATATCAAATTGC+TGG - chr4_4:39579420-39579439 None:intergenic 30.0%
AGACAAGAAGAGAAAAGTTA+GGG - chr4_4:39579525-39579544 None:intergenic 30.0%
AAGACAAGAAGAGAAAAGTT+AGG - chr4_4:39579526-39579545 None:intergenic 30.0%
!! TTTGTGTGTTGGTTAGTTAA+GGG + chr4_4:39579750-39579769 Msa0680500:intron 30.0%
ATATAAATAAATGGAGGGCA+TGG + chr4_4:39579991-39580010 Msa0680500:intron 30.0%
! TATAAATAAATGGAGGGCAT+GGG + chr4_4:39579992-39580011 Msa0680500:intron 30.0%
! GGCATAGTAATTTGTCAAAA+GGG + chr4_4:39580014-39580033 Msa0680500:intron 30.0%
! GCATAGTAATTTGTCAAAAG+GGG + chr4_4:39580015-39580034 Msa0680500:intron 30.0%
! CATAGTAATTTGTCAAAAGG+GGG + chr4_4:39580016-39580035 Msa0680500:intron 30.0%
! ATAGTAATTTGTCAAAAGGG+GGG + chr4_4:39580017-39580036 Msa0680500:intron 30.0%
TTGTTAATCTTTCACTGATG+GGG - chr4_4:39580226-39580245 None:intergenic 30.0%
TACAACAACTTCTTCTCTTA+AGG + chr4_4:39580409-39580428 Msa0680500:intron 30.0%
CTTCTTCTCTTAAGGTTATA+TGG + chr4_4:39580417-39580436 Msa0680500:intron 30.0%
!! TCATCTTTGATTTGTTCATG+AGG - chr4_4:39580462-39580481 None:intergenic 30.0%
! TTTTCCATTAGATGCATATG+TGG + chr4_4:39580591-39580610 Msa0680500:intron 30.0%
TTTCCATTAGATGCATATGT+GGG + chr4_4:39580592-39580611 Msa0680500:intron 30.0%
!! AGAGTTCTAAAGTCTTTCAA+AGG - chr4_4:39580746-39580765 None:intergenic 30.0%
! GTTTTCTTTTGTAGTGAGTT+TGG - chr4_4:39580769-39580788 None:intergenic 30.0%
ACTCACTACAAAAGAAAACA+TGG + chr4_4:39580770-39580789 Msa0680500:CDS 30.0%
! CCACATTTTCTACACATAAA+TGG - chr4_4:39580803-39580822 None:intergenic 30.0%
CCATTTATGTGTAGAAAATG+TGG + chr4_4:39580800-39580819 Msa0680500:CDS 30.0%
AAAAGAATTGTGGCAAGTTA+TGG + chr4_4:39580861-39580880 Msa0680500:CDS 30.0%
GATCTCTCAAAGATCATATT+AGG + chr4_4:39580918-39580937 Msa0680500:CDS 30.0%
!! CATATTAGGTCTTTTGGAAA+AGG + chr4_4:39580932-39580951 Msa0680500:CDS 30.0%
!!! GCTTTTTCAACTTTTTCTAG+TGG - chr4_4:39581101-39581120 None:intergenic 30.0%
CACTGAAAAGTGATTAAACT+CGG - chr4_4:39581212-39581231 None:intergenic 30.0%
!!! AAATCCTTTTGGTAATGAAG+CGG - chr4_4:39581498-39581517 None:intergenic 30.0%
! CTTACATACAGAAATCCTTT+TGG - chr4_4:39581509-39581528 None:intergenic 30.0%
CAAACCATCATATAAGTGCT+TGG + chr4_4:39577067-39577086 Msa0680500:five_prime_UTR 35.0%
GAAACCAAGCACTTATATGA+TGG - chr4_4:39577074-39577093 None:intergenic 35.0%
ACTCATCAAGGTAAAGAGTA+TGG + chr4_4:39577094-39577113 Msa0680500:exon 35.0%
AACTCAAAACCCTCAATTTG+TGG - chr4_4:39577299-39577318 None:intergenic 35.0%
CAAAGAAGAAAAAGAGACTG+TGG + chr4_4:39577319-39577338 Msa0680500:CDS 35.0%
!! AGATAGGTTTTAGTGTCATG+AGG - chr4_4:39577362-39577381 None:intergenic 35.0%
CAATAGGTATAACAACATGC+AGG + chr4_4:39577523-39577542 Msa0680500:CDS 35.0%
! TAAGCTAGCTTATAGCTTGT+TGG + chr4_4:39577704-39577723 Msa0680500:intron 35.0%
TTCAAAAAACGCTAAGCTAG+TGG - chr4_4:39577785-39577804 None:intergenic 35.0%
CGAGCAAGTCACAAAAAATA+TGG - chr4_4:39578032-39578051 None:intergenic 35.0%
GGTAAAATTAGCTGTTCAAG+TGG - chr4_4:39578413-39578432 None:intergenic 35.0%
!! TTTTTCACTAAGGGTGTGTT+TGG - chr4_4:39578564-39578583 None:intergenic 35.0%
AAGTTCCTTCATTGTTTGAG+TGG + chr4_4:39578772-39578791 Msa0680500:intron 35.0%
TATGGTGATCTCTCGTTATT+GGG - chr4_4:39579063-39579082 None:intergenic 35.0%
TTATGGTGATCTCTCGTTAT+TGG - chr4_4:39579064-39579083 None:intergenic 35.0%
ATTTCTCTCCATCTATCTCT+CGG - chr4_4:39579093-39579112 None:intergenic 35.0%
AGAGATAGATGGAGAGAAAT+CGG + chr4_4:39579093-39579112 Msa0680500:intron 35.0%
AAGAAGAGAAAAGTTAGGGA+AGG - chr4_4:39579521-39579540 None:intergenic 35.0%
! ATGGGTTATGATCACTTCAA+AGG + chr4_4:39579637-39579656 Msa0680500:intron 35.0%
TGGGTTATGATCACTTCAAA+GGG + chr4_4:39579638-39579657 Msa0680500:intron 35.0%
ACAAAGCAGACAATATTCCA+GGG - chr4_4:39579735-39579754 None:intergenic 35.0%
ATATTGTCTGCTTTGTGTGT+TGG + chr4_4:39579739-39579758 Msa0680500:intron 35.0%
!! CTTTGTGTGTTGGTTAGTTA+AGG + chr4_4:39579749-39579768 Msa0680500:intron 35.0%
! ATAAATAAATGGAGGGCATG+GGG + chr4_4:39579993-39580012 Msa0680500:intron 35.0%
! GGGCATAGTAATTTGTCAAA+AGG + chr4_4:39580013-39580032 Msa0680500:intron 35.0%
GGCAACAATTATGGTCATAT+AGG + chr4_4:39580253-39580272 Msa0680500:intron 35.0%
TTCCATTAGATGCATATGTG+GGG + chr4_4:39580593-39580612 Msa0680500:intron 35.0%
CATGGATCTGAATTTAGGAA+AGG + chr4_4:39580617-39580636 Msa0680500:CDS 35.0%
AGGACTCATGAAAAGAATTG+TGG + chr4_4:39580851-39580870 Msa0680500:CDS 35.0%
AAGTTATGGTATTGCACTTG+TGG + chr4_4:39580875-39580894 Msa0680500:CDS 35.0%
AAAGCTTGATCATCAATCGA+AGG - chr4_4:39580971-39580990 None:intergenic 35.0%
ATAAATACGGTTACCTCAAG+TGG + chr4_4:39581380-39581399 Msa0680500:three_prime_UTR 35.0%
TTCTCATAGTAATAGAGGGT+AGG + chr4_4:39581421-39581440 Msa0680500:three_prime_UTR 35.0%
TTATCCGCTTCATTACCAAA+AGG + chr4_4:39581491-39581510 Msa0680500:three_prime_UTR 35.0%
! GGTAAAGAGTATGGCTATGA+TGG + chr4_4:39577103-39577122 Msa0680500:exon 40.0%
! TATGATGGAGTGTGATGTAG+AGG + chr4_4:39577118-39577137 Msa0680500:CDS 40.0%
TGGTATCCAAAACCTTTGGA+AGG - chr4_4:39577441-39577460 None:intergenic 40.0%
!! GAGTTGGTATCCAAAACCTT+TGG - chr4_4:39577445-39577464 None:intergenic 40.0%
CAAATTGCATAGGTCCAACA+AGG - chr4_4:39577478-39577497 None:intergenic 40.0%
ATGGAGCAAGCAAATTGCAT+AGG - chr4_4:39577488-39577507 None:intergenic 40.0%
!! TTTGTGACTTGCTCGTAGAT+TGG + chr4_4:39578037-39578056 Msa0680500:intron 40.0%
! CTCGTTATTGGGACTCTTTT+GGG - chr4_4:39579052-39579071 None:intergenic 40.0%
! TCTCGTTATTGGGACTCTTT+TGG - chr4_4:39579053-39579072 None:intergenic 40.0%
!! CTATCTCTCGGTGTTTGTTA+TGG - chr4_4:39579081-39579100 None:intergenic 40.0%
AACAAACACCGAGAGATAGA+TGG + chr4_4:39579082-39579101 Msa0680500:intron 40.0%
ATAGATGGAGAGAAATCGGA+TGG + chr4_4:39579097-39579116 Msa0680500:intron 40.0%
! CTGATGCTCCTTTTATGAGT+GGG - chr4_4:39579224-39579243 None:intergenic 40.0%
! ACTGATGCTCCTTTTATGAG+TGG - chr4_4:39579225-39579244 None:intergenic 40.0%
TGTCAATGAAGTTCTCGTCT+TGG - chr4_4:39579276-39579295 None:intergenic 40.0%
AGCACCTACATTTAGGCATA+CGG + chr4_4:39579331-39579350 Msa0680500:intron 40.0%
TTGTCCGTATGCCTAAATGT+AGG - chr4_4:39579338-39579357 None:intergenic 40.0%
AAAGTGAAGGGAATGCTAGA+GGG - chr4_4:39579600-39579619 None:intergenic 40.0%
!! TTGGGTTGAAAATTAACCCC+TGG + chr4_4:39579715-39579734 Msa0680500:intron 40.0%
CAAAGCAGACAATATTCCAG+GGG - chr4_4:39579734-39579753 None:intergenic 40.0%
CACAAAGCAGACAATATTCC+AGG - chr4_4:39579736-39579755 None:intergenic 40.0%
CTAAAAATAGAGCTAGTGCC+CGG + chr4_4:39579797-39579816 Msa0680500:intron 40.0%
TTTCTACTTAACTGCGAGAG+AGG + chr4_4:39579927-39579946 Msa0680500:intron 40.0%
TTCTACTTAACTGCGAGAGA+GGG + chr4_4:39579928-39579947 Msa0680500:intron 40.0%
! TAATTTGTCAAAAGGGGGGT+AGG + chr4_4:39580021-39580040 Msa0680500:intron 40.0%
TAATCTTTCACTGATGGGGT+AGG - chr4_4:39580222-39580241 None:intergenic 40.0%
TCCATTAGATGCATATGTGG+GGG + chr4_4:39580594-39580613 Msa0680500:intron 40.0%
! TCTTTCAAAGGCTTAGCTCT+TGG - chr4_4:39580734-39580753 None:intergenic 40.0%
!! GGGAAAACATTTGCTGTCAA+AGG + chr4_4:39580821-39580840 Msa0680500:CDS 40.0%
!! CATTTGCTGTCAAAGGTGAT+TGG + chr4_4:39580828-39580847 Msa0680500:CDS 40.0%
TGATGATCAAGCTTTCGAAG+AGG + chr4_4:39580976-39580995 Msa0680500:CDS 40.0%
ATATTGCTGAGGCATGAACA+TGG + chr4_4:39581271-39581290 Msa0680500:three_prime_UTR 40.0%
TTCATCTACTTCACCACTTG+AGG - chr4_4:39581396-39581415 None:intergenic 40.0%
GTGCTTGGTTTCACTCATCA+AGG + chr4_4:39577082-39577101 Msa0680500:five_prime_UTR 45.0%
! CGTGAAGTGCCACAAATTGA+GGG + chr4_4:39577287-39577306 Msa0680500:CDS 45.0%
! GAGACTGTGGCTTTGCATAT+TGG + chr4_4:39577332-39577351 Msa0680500:CDS 45.0%
CTGATAGCTGATAAGCTAGC+TGG - chr4_4:39578520-39578539 None:intergenic 45.0%
ACTATAAGGTCTAGCAGGAG+AGG + chr4_4:39578701-39578720 Msa0680500:intron 45.0%
CTATAAGGTCTAGCAGGAGA+GGG + chr4_4:39578702-39578721 Msa0680500:intron 45.0%
CCTTGCCACTCAAACAATGA+AGG - chr4_4:39578780-39578799 None:intergenic 45.0%
CCTTCATTGTTTGAGTGGCA+AGG + chr4_4:39578777-39578796 Msa0680500:intron 45.0%
ATGGAGAGAAATCGGATGGA+GGG + chr4_4:39579101-39579120 Msa0680500:intron 45.0%
GCATACAGGATTGTTGGAGA+TGG - chr4_4:39579168-39579187 None:intergenic 45.0%
GATAGGGCATACAGGATTGT+TGG - chr4_4:39579174-39579193 None:intergenic 45.0%
CTCAAACTGATAGGGCATAC+AGG - chr4_4:39579182-39579201 None:intergenic 45.0%
ATGCCCTATCAGTTTGAGCA+CGG + chr4_4:39579184-39579203 Msa0680500:intron 45.0%
ATCCCGTGCTCAAACTGATA+GGG - chr4_4:39579190-39579209 None:intergenic 45.0%
TATCCCGTGCTCAAACTGAT+AGG - chr4_4:39579191-39579210 None:intergenic 45.0%
TATCAGTTTGAGCACGGGAT+AGG + chr4_4:39579190-39579209 Msa0680500:intron 45.0%
TTGCACCTCCCACTCATAAA+AGG + chr4_4:39579213-39579232 Msa0680500:intron 45.0%
! ATGCTCCTTTTATGAGTGGG+AGG - chr4_4:39579221-39579240 None:intergenic 45.0%
TCGTCTTGGAAACGACTCAT+TGG - chr4_4:39579262-39579281 None:intergenic 45.0%
TCGAGCTAGCTATAGCTAGA+TGG + chr4_4:39579564-39579583 Msa0680500:intron 45.0%
GAAAGTGAAGGGAATGCTAG+AGG - chr4_4:39579601-39579620 None:intergenic 45.0%
GTGTAGGACATGTAACATCG+AGG + chr4_4:39580043-39580062 Msa0680500:intron 45.0%
AAAGGACCAGACTCACTAAG+AGG + chr4_4:39580635-39580654 Msa0680500:CDS 45.0%
CCTTGAACACAACAGTAGCA+TGG - chr4_4:39580689-39580708 None:intergenic 45.0%
CCATGCTACTGTTGTGTTCA+AGG + chr4_4:39580686-39580705 Msa0680500:CDS 45.0%
TTGCTGTCAAAGGTGATTGG+AGG + chr4_4:39580831-39580850 Msa0680500:CDS 45.0%
TCAAGCTTTCGAAGAGGAGA+AGG + chr4_4:39580982-39581001 Msa0680500:CDS 45.0%
CAAGCTTTCGAAGAGGAGAA+GGG + chr4_4:39580983-39581002 Msa0680500:CDS 45.0%
TGTTTAGCTACCGAGCACTT+AGG + chr4_4:39581297-39581316 Msa0680500:three_prime_UTR 45.0%
GTTTAGCTACCGAGCACTTA+GGG + chr4_4:39581298-39581317 Msa0680500:three_prime_UTR 45.0%
TCATCACTACCCTAAGTGCT+CGG - chr4_4:39581310-39581329 None:intergenic 45.0%
!! TTATTAAAATAAAAAATGTT+TGG - chr4_4:39578434-39578453 None:intergenic 5.0%
!!! TTTTTTTTTTTTTGTTATAT+CGG - chr4_4:39579003-39579022 None:intergenic 5.0%
!! AAAAAAAAAAAAACTATAAA+TGG + chr4_4:39579011-39579030 Msa0680500:intron 5.0%
!! AAAAAAAAAAAACTATAAAT+GGG + chr4_4:39579012-39579031 Msa0680500:intron 5.0%
!! ACTATATAAATATAAATAAA+TGG + chr4_4:39579982-39580001 Msa0680500:intron 5.0%
!!! ATTATAATTTATCTTTTTTT+AGG - chr4_4:39580346-39580365 None:intergenic 5.0%
! GCGTGAAGTGCCACAAATTG+AGG + chr4_4:39577286-39577305 Msa0680500:CDS 50.0%
ACAAGGATCTGAGCAGGAGT+TGG - chr4_4:39577461-39577480 None:intergenic 50.0%
ACTCCTGCTCAGATCCTTGT+TGG + chr4_4:39577461-39577480 Msa0680500:CDS 50.0%
CTGGTAGCTGAAAAGCTAGC+TGG - chr4_4:39578501-39578520 None:intergenic 50.0%
GATGGAGAGAAATCGGATGG+AGG + chr4_4:39579100-39579119 Msa0680500:intron 50.0%
TGGAGAGAAATCGGATGGAG+GGG + chr4_4:39579102-39579121 Msa0680500:intron 50.0%
GAGCAGACATAAGACCAACC+AGG + chr4_4:39579132-39579151 Msa0680500:intron 50.0%
TGCCCTATCAGTTTGAGCAC+GGG + chr4_4:39579185-39579204 Msa0680500:intron 50.0%
GAATGCTAGAGGGACACAAG+AGG - chr4_4:39579590-39579609 None:intergenic 50.0%
GCCCCCACATATGCATCTAA+TGG - chr4_4:39580598-39580617 None:intergenic 50.0%
TAGATGCATATGTGGGGGCA+TGG + chr4_4:39580599-39580618 Msa0680500:intron 50.0%
! GGGGGCATGGATCTGAATTT+AGG + chr4_4:39580612-39580631 Msa0680500:CDS 50.0%
TGTGTGCCTCTTAGTGAGTC+TGG - chr4_4:39580644-39580663 None:intergenic 50.0%
CACAACCAGCTGCAATGCTA+AGG + chr4_4:39580660-39580679 Msa0680500:CDS 50.0%
GAGGAGAAGGGATGTGTTAC+TGG + chr4_4:39580995-39581014 Msa0680500:CDS 50.0%
GGTCCAACAAGGATCTGAGC+AGG - chr4_4:39577467-39577486 None:intergenic 55.0%
ATGGATCACGATCGCCTGGT+TGG - chr4_4:39579149-39579168 None:intergenic 55.0%
GTCAAAAGGGGGGTAGGTGT+AGG + chr4_4:39580027-39580046 Msa0680500:intron 55.0%
! GGTAGCCTTAGCATTGCAGC+TGG - chr4_4:39580668-39580687 None:intergenic 55.0%
GGAGATGGATCACGATCGCC+TGG - chr4_4:39579153-39579172 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 39577002 39581584 39577002 ID=Msa0680500;Name=Msa0680500
chr4_4 mRNA 39577002 39581584 39577002 ID=Msa0680500-mRNA-1;Parent=Msa0680500;Name=Msa0680500-mRNA-1;_AED=0.00;_eAED=0.00;_QI=111|1|1|1|1|1|2|536|292
chr4_4 exon 39577002 39577544 39577002 ID=Msa0680500-mRNA-1:exon:9336;Parent=Msa0680500-mRNA-1
chr4_4 exon 39580602 39581584 39580602 ID=Msa0680500-mRNA-1:exon:9337;Parent=Msa0680500-mRNA-1
chr4_4 five_prime_UTR 39577002 39577112 39577002 ID=Msa0680500-mRNA-1:five_prime_utr;Parent=Msa0680500-mRNA-1
chr4_4 CDS 39577113 39577544 39577113 ID=Msa0680500-mRNA-1:cds;Parent=Msa0680500-mRNA-1
chr4_4 CDS 39580602 39581048 39580602 ID=Msa0680500-mRNA-1:cds;Parent=Msa0680500-mRNA-1
chr4_4 three_prime_UTR 39581049 39581584 39581049 ID=Msa0680500-mRNA-1:three_prime_utr;Parent=Msa0680500-mRNA-1
Gene Sequence

>Msa0680500

ATGGCTATGATGGAGTGTGATGTAGAGGACAATAATTTCATTGAGTGGCTCAAACCATCTAATTCCTCTCAATCATATCTAACTTCATCATCATCATCTTCTTCTTCTACCACTCGAAATGAAACTATACAATTCTTTCCTATTTTGAGTGCAAAGTTTTCAAAGGATGAAGAGCGTGAAGTGCCACAAATTGAGGGTTTTGAGTTCAAAGAAGAAAAAGAGACTGTGGCTTTGCATATTGGATTACCTCATGACACTAAAACCTATCTTCATGAGAAGAAGTTTTTCCATGTTAAAGAAGAAGAAGAAAAGCCTTCTAAAAAAACCTTCCAAAGGTTTTGGATACCAACTCCTGCTCAGATCCTTGTTGGACCTATGCAATTTGCTTGCTCCATATGCAACAAAACCTTCAATAGGTATAACAACATGCAGATGCATATGTGGGGGCATGGATCTGAATTTAGGAAAGGACCAGACTCACTAAGAGGCACACAACCAGCTGCAATGCTAAGGCTACCATGCTACTGTTGTGTTCAAGGTTGCAAGAACAACATCAATCATCCAAGAGCTAAGCCTTTGAAAGACTTTAGAACTCTCCAAACTCACTACAAAAGAAAACATGGAACAAAACCATTTATGTGTAGAAAATGTGGGAAAACATTTGCTGTCAAAGGTGATTGGAGGACTCATGAAAAGAATTGTGGCAAGTTATGGTATTGCACTTGTGGTTCAGATTTTAAACACAAAAGATCTCTCAAAGATCATATTAGGTCTTTTGGAAAAGGTCATCATCGTCTTCCTTCGATTGATGATCAAGCTTTCGAAGAGGAGAAGGGATGTGTTACTGGCTCTGAAGAAGATGAATTTGCTCGTACATGA
Protein sequence

>Msa0680500

MAMMECDVEDNNFIEWLKPSNSSQSYLTSSSSSSSSTTRNETIQFFPILSAKFSKDEEREVPQIEGFEFKEEKETVALHIGLPHDTKTYLHEKKFFHVKEEEEKPSKKTFQRFWIPTPAQILVGPMQFACSICNKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPCYCCVQGCKNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKCGKTFAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHHRLPSIDDQAFEEEKGCVTGSEEDEFART*