AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0601430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0601430 MtrunA17_Chr4g0026521 91.186 295 23 1 1 292 1 295 6.61e-177 489
Msa0601430 MtrunA17_Chr2g0321291 68.730 307 70 9 5 290 6 307 6.46e-134 381
Msa0601430 MtrunA17_Chr2g0328921 63.830 235 77 2 36 263 53 286 7.03e-109 318
Msa0601430 MtrunA17_Chr8g0352011 66.063 221 61 4 72 279 110 329 5.58e-105 309
Msa0601430 MtrunA17_Chr1g0173841 61.355 251 67 6 64 287 137 384 7.26e-105 310
Msa0601430 MtrunA17_Chr7g0258011 54.710 276 91 5 43 287 73 345 4.98e-104 307
Msa0601430 MtrunA17_Chr5g0422571 64.977 217 63 4 75 288 65 271 3.37e-103 303
Msa0601430 MtrunA17_Chr4g0053341 59.821 224 80 2 43 263 6 222 2.35e-96 283
Msa0601430 MtrunA17_Chr1g0198651 73.410 173 40 3 103 269 89 261 3.21e-95 283
Msa0601430 MtrunA17_Chr1g0200421 38.415 164 89 6 122 277 245 404 5.37e-26 107
Msa0601430 MtrunA17_Chr2g0320341 35.329 167 98 7 115 274 231 394 4.17e-23 97.8
Msa0601430 MtrunA17_Chr4g0029521 35.366 164 89 5 105 259 36 191 2.84e-20 90.5
Msa0601430 MtrunA17_Chr1g0181381 34.932 146 86 4 115 259 54 191 5.91e-20 89.7
Msa0601430 MtrunA17_Chr2g0326381 31.818 176 109 4 98 269 31 199 5.92e-20 89.0
Msa0601430 MtrunA17_Chr8g0382121 38.129 139 79 5 130 263 127 263 1.05e-19 87.4
Msa0601430 MtrunA17_Chr1g0151351 35.461 141 82 4 120 259 62 194 2.27e-19 87.8
Msa0601430 MtrunA17_Chr7g0263941 36.054 147 82 6 115 259 50 186 3.36e-19 87.0
Msa0601430 MtrunA17_Chr3g0123941 36.810 163 91 7 130 288 139 293 3.54e-19 86.3
Msa0601430 MtrunA17_Chr1g0185121 34.694 147 85 5 115 259 56 193 4.19e-19 87.0
Msa0601430 MtrunA17_Chr7g0268961 35.252 139 80 4 122 259 45 174 5.80e-19 86.7
Msa0601430 MtrunA17_Chr8g0373541 32.558 172 98 7 97 259 23 185 6.92e-19 86.7
Msa0601430 MtrunA17_Chr1g0191991 35.714 140 78 5 122 259 86 215 1.68e-18 85.5
Msa0601430 MtrunA17_Chr8g0342421 30.435 184 108 7 86 259 41 214 2.26e-18 85.1
Msa0601430 MtrunA17_Chr2g0330171 31.707 164 100 5 98 259 45 198 4.01e-18 84.0
Msa0601430 MtrunA17_Chr1g0210821 34.014 147 85 5 115 259 60 196 6.44e-18 83.6
Msa0601430 MtrunA17_Chr1g0199101 31.902 163 99 6 99 259 47 199 8.05e-18 83.6
Msa0601430 MtrunA17_Chr3g0141431 33.129 163 91 5 105 257 20 174 1.49e-17 82.0
Msa0601430 MtrunA17_Chr1g0162971 35.000 140 79 5 122 259 64 193 2.40e-17 81.6
Msa0601430 MtrunA17_Chr2g0324991 34.507 142 83 5 115 254 8 141 3.12e-17 77.0
Msa0601430 MtrunA17_Chr1g0163001 33.333 147 86 5 115 259 59 195 6.47e-17 80.9
Msa0601430 MtrunA17_Chr4g0040571 31.507 146 90 4 115 259 55 191 4.95e-16 78.2
Msa0601430 MtrunA17_Chr8g0375521 30.935 139 85 5 120 255 48 178 1.59e-12 67.4
Msa0601430 MtrunA17_Chr6g0479921 27.607 163 106 5 122 282 52 204 2.32e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0601430 AT1G08290.1 53.776 331 89 8 9 282 12 335 1.50e-110 323
Msa0601430 AT1G51220.1 51.408 284 107 4 11 263 30 313 1.14e-100 298
Msa0601430 AT3G57670.1 79.518 166 31 2 112 277 201 363 1.60e-100 300
Msa0601430 AT3G20880.1 73.184 179 44 1 110 288 238 412 1.28e-99 298
Msa0601430 AT1G13290.1 70.157 191 48 4 75 263 55 238 8.77e-97 287
Msa0601430 AT1G34790.1 61.009 218 74 3 76 285 85 299 1.49e-91 274
Msa0601430 AT1G34370.3 39.735 151 79 5 122 263 28 175 9.85e-27 106
Msa0601430 AT1G34370.2 39.735 151 79 5 122 263 238 385 5.35e-26 107
Msa0601430 AT1G34370.1 39.735 151 79 5 122 263 238 385 5.35e-26 107
Msa0601430 AT5G22890.1 36.196 163 95 5 104 259 195 355 7.16e-24 100
Msa0601430 AT5G03150.1 32.317 164 100 5 98 259 52 206 4.04e-20 90.5
Msa0601430 AT5G66730.1 35.461 141 81 4 120 259 53 184 1.47e-19 89.0
Msa0601430 AT1G55110.3 31.098 164 102 5 98 259 62 216 4.81e-19 87.0
Msa0601430 AT1G55110.1 31.098 164 102 5 98 259 62 216 4.81e-19 87.0
Msa0601430 AT1G55110.2 31.098 164 102 5 98 259 62 216 4.81e-19 87.0
Msa0601430 AT5G60470.1 36.691 139 79 4 122 259 58 188 6.34e-19 86.7
Msa0601430 AT5G60470.3 35.971 139 80 4 122 259 63 193 1.06e-18 86.3
Msa0601430 AT5G60470.2 35.971 139 80 4 122 259 67 197 1.10e-18 86.3
Msa0601430 AT5G44160.1 29.282 181 115 5 83 259 18 189 2.04e-18 85.5
Msa0601430 AT3G45260.2 35.971 139 80 4 122 259 62 192 2.63e-18 85.1
Msa0601430 AT3G45260.1 35.971 139 80 4 122 259 62 192 2.63e-18 85.1
Msa0601430 AT2G02080.1 30.864 162 102 4 99 259 54 206 3.86e-18 84.7
Msa0601430 AT2G02080.4 30.864 162 102 4 99 259 54 206 3.86e-18 84.7
Msa0601430 AT2G02080.5 30.864 162 102 4 99 259 54 206 3.86e-18 84.7
Msa0601430 AT2G02080.3 30.864 162 102 4 99 259 54 206 3.86e-18 84.7
Msa0601430 AT1G14580.1 31.902 163 99 5 99 259 53 205 4.24e-18 84.3
Msa0601430 AT1G14580.2 31.902 163 99 5 99 259 53 205 4.24e-18 84.3
Msa0601430 AT2G02070.2 31.481 162 101 4 99 259 52 204 4.63e-18 84.7
Msa0601430 AT2G02070.1 31.481 162 101 4 99 259 52 204 4.63e-18 84.7
Msa0601430 AT1G14580.3 31.902 163 99 5 99 259 67 219 4.79e-18 84.3
Msa0601430 AT3G13810.5 30.864 162 103 4 99 259 65 218 9.36e-18 83.6
Msa0601430 AT1G03840.1 32.515 163 100 5 98 259 40 193 1.02e-17 83.6
Msa0601430 AT3G13810.6 31.481 162 102 4 99 259 51 204 1.05e-17 83.2
Msa0601430 AT3G13810.4 30.864 162 103 4 99 259 70 223 1.07e-17 83.6
Msa0601430 AT3G13810.1 30.864 162 103 4 99 259 70 223 1.07e-17 83.6
Msa0601430 AT3G13810.3 33.562 146 88 4 115 259 73 210 1.14e-17 83.2
Msa0601430 AT3G13810.2 33.562 146 88 4 115 259 87 224 1.17e-17 83.2
Msa0601430 AT2G02080.6 35.821 134 76 4 127 259 5 129 1.40e-17 82.8
Msa0601430 AT2G02080.2 35.821 134 76 4 127 259 5 129 1.40e-17 82.8
Msa0601430 AT3G50700.1 33.562 146 87 4 115 259 50 186 1.65e-17 82.8
Msa0601430 AT4G02670.1 34.247 146 87 4 115 259 69 206 2.21e-17 82.0
Msa0601430 AT4G02670.2 34.247 146 87 4 115 259 71 208 2.27e-17 82.0
Msa0601430 AT1G03840.2 34.247 146 86 5 115 259 55 191 2.51e-17 82.4
Msa0601430 AT5G44160.2 33.094 139 83 4 122 259 21 150 3.79e-17 81.6
Msa0601430 AT1G68130.1 29.870 154 94 5 120 266 62 208 5.31e-13 69.3
Msa0601430 AT1G25250.1 28.986 138 90 4 120 255 31 162 1.82e-12 67.4
Msa0601430 AT1G25250.3 28.986 138 90 4 120 255 54 185 2.81e-12 67.0
Msa0601430 AT2G01940.1 30.216 139 86 5 120 255 65 195 2.67e-11 64.3

Find 72 sgRNAs with CRISPR-Local

Find 245 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATAAAATTAATAATTAATT+TGG 0.048160 4_2:-44103386 None:intergenic
AAAGATCATATTAGGTCTTT+TGG 0.190747 4_2:+44107404 Msa0601430:CDS
GAAAACTTTGCACTCAAAAT+AGG 0.197503 4_2:-44103597 None:intergenic
CCATGCTACTGTTGTGTTCA+AGG 0.271424 4_2:+44107164 Msa0601430:CDS
GAGGAGAAGGGATGTGTTAC+TGG 0.312071 4_2:+44107473 Msa0601430:CDS
AAACTTCTTCTCATGAAGAT+AGG 0.335592 4_2:-44103721 None:intergenic
GATCTCTCAAAGATCATATT+AGG 0.336377 4_2:+44107396 Msa0601430:CDS
GAGACTGTGGCTTTGCATAT+TGG 0.342224 4_2:+44103678 Msa0601430:CDS
ATAAAATTAATAATTAATTT+GGG 0.347784 4_2:-44103385 None:intergenic
TATGATTGAGAGGAATTAGA+TGG 0.353434 4_2:-44103513 None:intergenic
CTTACATACAGAAATCCTTT+TGG 0.368821 4_2:-44107985 None:intergenic
ACTCATCAAGGTAAAGAGTA+TGG 0.382063 4_2:+44103440 Msa0601430:exon
CATGTTGTTATACCTATTGA+AGG 0.383480 4_2:-44103865 None:intergenic
AACTCAAAACCCTCAATTTG+TGG 0.388963 4_2:-44103642 None:intergenic
TCTTTCAAAGGCTTAGCTCT+TGG 0.410923 4_2:-44107209 None:intergenic
CATTTGCTGTCAAAGGTGAT+TGG 0.415877 4_2:+44107306 Msa0601430:CDS
TGTGTGCCTCTTAGTGAGTC+TGG 0.423624 4_2:-44107119 None:intergenic
ATTTAGAAATGCTAGATACT+TGG 0.425305 4_2:-44107528 None:intergenic
AAAAGAATTGTGGCAAGTTA+TGG 0.431308 4_2:+44107339 Msa0601430:CDS
ACTCCTGCTCAGATCCTTGT+TGG 0.433316 4_2:+44103807 Msa0601430:CDS
TATGCAACAAAACCTTCAAT+AGG 0.434246 4_2:+44103853 Msa0601430:CDS
GCGTGAAGTGCCACAAATTG+AGG 0.454416 4_2:+44103632 Msa0601430:CDS
GGTAAAGAGTATGGCTATGA+TGG 0.462532 4_2:+44103449 Msa0601430:exon
GTTTAGCTACCGAGCACTTA+GGG 0.466130 4_2:+44107776 Msa0601430:three_prime_UTR
TGTTTAGCTACCGAGCACTT+AGG 0.480389 4_2:+44107775 Msa0601430:three_prime_UTR
GAAACCAAGCACTTATATGA+TGG 0.481094 4_2:-44103417 None:intergenic
GAGTTGGTATCCAAAACCTT+TGG 0.485962 4_2:-44103788 None:intergenic
CCATTTATGTGTAGAAAATG+TGG 0.488125 4_2:+44107278 Msa0601430:CDS
TCTTGTTTGGAAATCATTGT+CGG 0.488696 4_2:+44108042 Msa0601430:three_prime_UTR
GGTAGCCTTAGCATTGCAGC+TGG 0.491825 4_2:-44107143 None:intergenic
CGTGAAGTGCCACAAATTGA+GGG 0.493265 4_2:+44103633 Msa0601430:CDS
TTCATCTACTTCACCACTTG+AGG 0.496683 4_2:-44107871 None:intergenic
CAAACCATCATATAAGTGCT+TGG 0.500864 4_2:+44103413 Msa0601430:five_prime_UTR
CACTGAAAAGTGATTAAACT+CGG 0.515713 4_2:-44107687 None:intergenic
TCAAGCTTTCGAAGAGGAGA+AGG 0.518310 4_2:+44107460 Msa0601430:CDS
AAGTTATGGTATTGCACTTG+TGG 0.518903 4_2:+44107353 Msa0601430:CDS
GTGCTTGGTTTCACTCATCA+AGG 0.520374 4_2:+44103428 Msa0601430:five_prime_UTR
TTTCTTCTTCTTCTTTAACA+TGG 0.521689 4_2:-44103746 None:intergenic
GCTATCATATATATCTATAG+AGG 0.526082 4_2:+44107808 Msa0601430:three_prime_UTR
TTTCCATTAGATGCATATGT+GGG 0.526101 4_2:+44107070 Msa0601430:intron
TTGCTGTCAAAGGTGATTGG+AGG 0.526560 4_2:+44107309 Msa0601430:CDS
TTATCCGCTTCATTACCAAA+AGG 0.529018 4_2:+44107970 Msa0601430:three_prime_UTR
CACAACCAGCTGCAATGCTA+AGG 0.533499 4_2:+44107138 Msa0601430:CDS
AGAGTTCTAAAGTCTTTCAA+AGG 0.540762 4_2:-44107221 None:intergenic
ATAAATACGGTTACCTCAAG+TGG 0.541228 4_2:+44107858 Msa0601430:three_prime_UTR
TGGTATCCAAAACCTTTGGA+AGG 0.554935 4_2:-44103784 None:intergenic
GGTCCAACAAGGATCTGAGC+AGG 0.564499 4_2:-44103810 None:intergenic
AGGACAATAATTTCATTGAG+TGG 0.566958 4_2:+44103484 Msa0601430:CDS
TCCATTAGATGCATATGTGG+GGG 0.571799 4_2:+44107072 Msa0601430:intron
ACAAGGATCTGAGCAGGAGT+TGG 0.574558 4_2:-44103804 None:intergenic
AAAGGACCAGACTCACTAAG+AGG 0.575770 4_2:+44107113 Msa0601430:CDS
TTTCTTCTCATAGTAATAGA+GGG 0.590684 4_2:+44107895 Msa0601430:three_prime_UTR
TTCCATTAGATGCATATGTG+GGG 0.605042 4_2:+44107071 Msa0601430:intron
CATTTATGTGTAGAAAATGT+GGG 0.610048 4_2:+44107279 Msa0601430:CDS
TTCTCATAGTAATAGAGGGT+AGG 0.610282 4_2:+44107899 Msa0601430:three_prime_UTR
TTGTATAGTTTCATTTCGAG+TGG 0.612164 4_2:-44103568 None:intergenic
ACTCACTACAAAAGAAAACA+TGG 0.615968 4_2:+44107248 Msa0601430:CDS
TGAAGTTAGATATGATTGAG+AGG 0.617034 4_2:-44103523 None:intergenic
CAAGCTTTCGAAGAGGAGAA+GGG 0.617403 4_2:+44107461 Msa0601430:CDS
AAAGCTTGATCATCAATCGA+AGG 0.619722 4_2:-44107446 None:intergenic
CAAATTGCATAGGTCCAACA+AGG 0.619822 4_2:-44103821 None:intergenic
CAATAGGTATAACAACATGC+AGG 0.621278 4_2:+44103869 Msa0601430:CDS
ATGGAGCAAGCAAATTGCAT+AGG 0.622517 4_2:-44103831 None:intergenic
AGGACTCATGAAAAGAATTG+TGG 0.623632 4_2:+44107329 Msa0601430:CDS
GGGAAAACATTTGCTGTCAA+AGG 0.623807 4_2:+44107299 Msa0601430:CDS
TCATCACTACCCTAAGTGCT+CGG 0.626424 4_2:-44107785 None:intergenic
CATGGATCTGAATTTAGGAA+AGG 0.631532 4_2:+44107095 Msa0601430:CDS
TGATGATCAAGCTTTCGAAG+AGG 0.631618 4_2:+44107454 Msa0601430:CDS
CATTATCAATAATATTGCTG+AGG 0.632429 4_2:+44107738 Msa0601430:three_prime_UTR
ATATTGCTGAGGCATGAACA+TGG 0.643082 4_2:+44107749 Msa0601430:three_prime_UTR
TATGATGGAGTGTGATGTAG+AGG 0.658485 4_2:+44103464 Msa0601430:CDS
CCTTGAACACAACAGTAGCA+TGG 0.671135 4_2:-44107164 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATTAATAATTAATTT+GGG - chr4_2:44103388-44103407 None:intergenic 0.0%
!! AATAAAATTAATAATTAATT+TGG - chr4_2:44103389-44103408 None:intergenic 0.0%
!!! AATTTTAATTTTAATAAATA+CGG + chr4_2:44107845-44107864 Msa0601430:three_prime_UTR 0.0%
!! ATTCATGAAATTTAATTAAA+AGG - chr4_2:44103902-44103921 None:intergenic 10.0%
!! TAAATTAATAACGTTAAAAT+TGG - chr4_2:44104334-44104353 None:intergenic 10.0%
!! TAGTTATTAATTATGAATAT+GGG - chr4_2:44104385-44104404 None:intergenic 10.0%
!! TATTGAATATAAAAACTATA+AGG + chr4_2:44105056-44105075 Msa0601430:intron 10.0%
!!! AACTGATTTTTTTAAATAAA+AGG - chr4_2:44105228-44105247 None:intergenic 10.0%
!!! AGTTTTTTTTTTTGTTATAT+CGG - chr4_2:44105372-44105391 None:intergenic 10.0%
!! ACAAAAAAAAAAACTATAAA+TGG + chr4_2:44105377-44105396 Msa0601430:intron 10.0%
!! CAAAAAAAAAAACTATAAAT+GGG + chr4_2:44105378-44105397 Msa0601430:intron 10.0%
!!! NNNNNNNNNNGAACTTTTTT+GGG + chr4_2:44106163-44106182 Msa0601430:intron 10.0%
!! TACTATATAAATACAAATAT+AGG + chr4_2:44106447-44106466 Msa0601430:intron 10.0%
!! AATTAATTAGTATAATCAAA+AGG - chr4_2:44106567-44106586 None:intergenic 10.0%
!!! GCATTTTTTTTTTTTTTTAT+GGG - chr4_2:44106989-44107008 None:intergenic 10.0%
!!! TGCATTTTTTTTTTTTTTTA+TGG - chr4_2:44106990-44107009 None:intergenic 10.0%
!! NNNTTACTTGTAAAGAAAAA+TGG + chr4_2:44104069-44104088 Msa0601430:intron 15.0%
!! GTAGTTATTAATTATGAATA+TGG - chr4_2:44104386-44104405 None:intergenic 15.0%
!! ATCATGAAAAAAAGAAAAAA+GGG - chr4_2:44104511-44104530 None:intergenic 15.0%
!! AATCATGAAAAAAAGAAAAA+AGG - chr4_2:44104512-44104531 None:intergenic 15.0%
!! TCATAAATACATTTATCATT+TGG + chr4_2:44104637-44104656 Msa0601430:intron 15.0%
!! CATAAATACATTTATCATTT+GGG + chr4_2:44104638-44104657 Msa0601430:intron 15.0%
!! TAAATATAAAATGACGTAAA+AGG - chr4_2:44104755-44104774 None:intergenic 15.0%
!!! AAGGCAAATTTTAATTATAA+GGG + chr4_2:44105165-44105184 Msa0601430:intron 15.0%
!!! ATTTTAATTATAAGGGATTT+TGG + chr4_2:44105172-44105191 Msa0601430:intron 15.0%
!!! ATTTGAAGTAAACAAATTAA+GGG - chr4_2:44105665-44105684 None:intergenic 15.0%
!!! AATTTGAAGTAAACAAATTA+AGG - chr4_2:44105666-44105685 None:intergenic 15.0%
!!! ATATTCTCCTTTTTTTTTAT+AGG + chr4_2:44105793-44105812 Msa0601430:intron 15.0%
!!! TCAAAAAGTTAATTTTTCAT+CGG + chr4_2:44105984-44106003 Msa0601430:intron 15.0%
!! ATATAAATACAAATATAGGT+AGG + chr4_2:44106451-44106470 Msa0601430:intron 15.0%
!! TTAATTGTATATATTATGAG+AGG + chr4_2:44106581-44106600 Msa0601430:intron 15.0%
!!! ACTTGAAGATTATTTTTTTA+TGG + chr4_2:44106762-44106781 Msa0601430:intron 15.0%
!! TGGAAAAATATTTATTAAGT+TGG - chr4_2:44107056-44107075 None:intergenic 15.0%
!!! AGTTTTCCATTTTTTTTCAT+GGG - chr4_2:44104102-44104121 None:intergenic 20.0%
!!! TAGTTTTCCATTTTTTTTCA+TGG - chr4_2:44104103-44104122 None:intergenic 20.0%
!!! ATCTCTAATTTTTTCACTAA+GGG - chr4_2:44104942-44104961 None:intergenic 20.0%
!!! TATCTCTAATTTTTTCACTA+AGG - chr4_2:44104943-44104962 None:intergenic 20.0%
!!! CAAGGCAAATTTTAATTATA+AGG + chr4_2:44105164-44105183 Msa0601430:intron 20.0%
!! AAAAAAAAACTATAAATGGG+AGG + chr4_2:44105381-44105400 Msa0601430:intron 20.0%
!! CAAATAGCCTATAAAAAAAA+AGG - chr4_2:44105803-44105822 None:intergenic 20.0%
!! ATATTGCAATTGTATTATGT+AGG - chr4_2:44105849-44105868 None:intergenic 20.0%
!!! ATTAACTTTTTGAAAGTGAA+GGG - chr4_2:44105977-44105996 None:intergenic 20.0%
!!! AATTAACTTTTTGAAAGTGA+AGG - chr4_2:44105978-44105997 None:intergenic 20.0%
!!! ACATTTTTCATATCAATTTC+CGG - chr4_2:44106285-44106304 None:intergenic 20.0%
!!! TGAAGATCAATTTTATTTCT+TGG + chr4_2:44106342-44106361 Msa0601430:intron 20.0%
!! AAGAAAACAAAACAAAACTT+TGG + chr4_2:44106536-44106555 Msa0601430:intron 20.0%
!!! TTGTTTTATTTCAACATTCA+TGG + chr4_2:44106624-44106643 Msa0601430:intron 20.0%
!!! TGTTTTATTTCAACATTCAT+GGG + chr4_2:44106625-44106644 Msa0601430:intron 20.0%
!! GGAAAGATTAACAAAATTAT+TGG + chr4_2:44106698-44106717 Msa0601430:intron 20.0%
!! AAAATTATTGGCAACAATTA+GGG + chr4_2:44106710-44106729 Msa0601430:intron 20.0%
!!! TTATGGTCTAATTTAAAGTA+AGG + chr4_2:44106779-44106798 Msa0601430:intron 20.0%
!!! TATGGTCTAATTTAAAGTAA+GGG + chr4_2:44106780-44106799 Msa0601430:intron 20.0%
!!! CTTTGATAAATTTTCTTGTT+TGG + chr4_2:44108029-44108048 Msa0601430:three_prime_UTR 20.0%
! TTTCTTCTTCTTCTTTAACA+TGG - chr4_2:44103749-44103768 None:intergenic 25.0%
! AAAACTCCCATGAAAAAAAA+TGG + chr4_2:44104093-44104112 Msa0601430:intron 25.0%
!! AAAAAAAATTAGCCTGTGTT+TGG + chr4_2:44104144-44104163 Msa0601430:intron 25.0%
! TCATAATTAATAACTACCCA+CGG + chr4_2:44104389-44104408 Msa0601430:intron 25.0%
! GTTAACAAAATATAAACCGT+GGG - chr4_2:44104408-44104427 None:intergenic 25.0%
! TGTTAACAAAATATAAACCG+TGG - chr4_2:44104409-44104428 None:intergenic 25.0%
! TTCGTAAGTAAATTTAGTGA+GGG - chr4_2:44104978-44104997 None:intergenic 25.0%
!! AAAAGGTATAGTTGAAAGAA+AGG - chr4_2:44105211-44105230 None:intergenic 25.0%
! CTTTGTGTTTGTAAAATTCA+TGG - chr4_2:44105762-44105781 None:intergenic 25.0%
!! CATTTTTCATATCAATTTCC+GGG - chr4_2:44106284-44106303 None:intergenic 25.0%
!!! ACGTTTTAAAGACTTAGTAA+TGG - chr4_2:44106316-44106335 None:intergenic 25.0%
!! GCATAGTAATTTGTCAAAAA+GGG + chr4_2:44106481-44106500 Msa0601430:intron 25.0%
!! CATAGTAATTTGTCAAAAAG+GGG + chr4_2:44106482-44106501 Msa0601430:intron 25.0%
!! ATAGTAATTTGTCAAAAAGG+GGG + chr4_2:44106483-44106502 Msa0601430:intron 25.0%
! CAAAATTATTGGCAACAATT+AGG + chr4_2:44106709-44106728 Msa0601430:intron 25.0%
! AAATTATTGGCAACAATTAG+GGG + chr4_2:44106711-44106730 Msa0601430:intron 25.0%
! TACAACAATTTCTTCTCTTA+AGG + chr4_2:44106890-44106909 Msa0601430:intron 25.0%
! TTTCTTCTCTTAAGGTTATA+TGG + chr4_2:44106898-44106917 Msa0601430:intron 25.0%
! CATTTATGTGTAGAAAATGT+GGG + chr4_2:44107279-44107298 Msa0601430:CDS 25.0%
!! AAAGATCATATTAGGTCTTT+TGG + chr4_2:44107404-44107423 Msa0601430:CDS 25.0%
! ATTTAGAAATGCTAGATACT+TGG - chr4_2:44107531-44107550 None:intergenic 25.0%
! CATTATCAATAATATTGCTG+AGG + chr4_2:44107738-44107757 Msa0601430:three_prime_UTR 25.0%
! GCTATCATATATATCTATAG+AGG + chr4_2:44107808-44107827 Msa0601430:three_prime_UTR 25.0%
!! TTTTCTTCTCATAGTAATAG+AGG + chr4_2:44107894-44107913 Msa0601430:three_prime_UTR 25.0%
! TTTCTTCTCATAGTAATAGA+GGG + chr4_2:44107895-44107914 Msa0601430:three_prime_UTR 25.0%
!!! TTTTTTTTATCCCTCTTCAT+TGG + chr4_2:44107940-44107959 Msa0601430:three_prime_UTR 25.0%
!! TAAATTTTCTCCAATGAAGA+GGG - chr4_2:44107953-44107972 None:intergenic 25.0%
!! ATAAATTTTCTCCAATGAAG+AGG - chr4_2:44107954-44107973 None:intergenic 25.0%
AGGACAATAATTTCATTGAG+TGG + chr4_2:44103484-44103503 Msa0601430:CDS 30.0%
TATGATTGAGAGGAATTAGA+TGG - chr4_2:44103516-44103535 None:intergenic 30.0%
TGAAGTTAGATATGATTGAG+AGG - chr4_2:44103526-44103545 None:intergenic 30.0%
TTGTATAGTTTCATTTCGAG+TGG - chr4_2:44103571-44103590 None:intergenic 30.0%
GAAAACTTTGCACTCAAAAT+AGG - chr4_2:44103600-44103619 None:intergenic 30.0%
! TTTGAGTGCAAAGTTTTCAA+AGG + chr4_2:44103602-44103621 Msa0601430:CDS 30.0%
AAACTTCTTCTCATGAAGAT+AGG - chr4_2:44103724-44103743 None:intergenic 30.0%
!!! CTTTGGAAGGTTTTTTTAGA+AGG - chr4_2:44103774-44103793 None:intergenic 30.0%
! CTTCTAAAAAAACCTTCCAA+AGG + chr4_2:44103772-44103791 Msa0601430:CDS 30.0%
! AAAAAACCTTCCAAAGGTTT+TGG + chr4_2:44103778-44103797 Msa0601430:CDS 30.0%
!!! ATTGAAGGTTTTGTTGCATA+TGG - chr4_2:44103853-44103872 None:intergenic 30.0%
TATGCAACAAAACCTTCAAT+AGG + chr4_2:44103853-44103872 Msa0601430:CDS 30.0%
CATGTTGTTATACCTATTGA+AGG - chr4_2:44103868-44103887 None:intergenic 30.0%
TTATTTGTGTTACCAAACAC+AGG - chr4_2:44104159-44104178 None:intergenic 30.0%
!! TTTTGAGAATAAGACGTGTT+TGG + chr4_2:44104216-44104235 Msa0601430:intron 30.0%
AAAAAAAGAAAAAAGGGCAG+TGG - chr4_2:44104505-44104524 None:intergenic 30.0%
CTTCGTAAGTAAATTTAGTG+AGG - chr4_2:44104979-44104998 None:intergenic 30.0%
CTCACTAAATTTACTTACGA+AGG + chr4_2:44104977-44104996 Msa0601430:intron 30.0%
TAAAAACTATAAGGTCTAGC+AGG + chr4_2:44105065-44105084 Msa0601430:intron 30.0%
!!! AAGTTCCTTCATTTTTTGAG+TGG + chr4_2:44105141-44105160 Msa0601430:intron 30.0%
ATTTCTCTCCATATATCTCT+CGG - chr4_2:44105458-44105477 None:intergenic 30.0%
AGAGATATATGGAGAGAAAT+CGG + chr4_2:44105458-44105477 Msa0601430:intron 30.0%
ATAGATTAGCACCTACATTT+AGG + chr4_2:44105689-44105708 Msa0601430:intron 30.0%
AAAGGAGAATATCAAATTGC+TGG - chr4_2:44105785-44105804 None:intergenic 30.0%
AGACAAGAAGAGAAAAGTTA+GGG - chr4_2:44105890-44105909 None:intergenic 30.0%
AAGACAAGAAGAGAAAAGTT+AGG - chr4_2:44105891-44105910 None:intergenic 30.0%
ATCGGTTATGATCATTTCAA+AGG + chr4_2:44106002-44106021 Msa0601430:intron 30.0%
TCGGTTATGATCATTTCAAA+GGG + chr4_2:44106003-44106022 Msa0601430:intron 30.0%
!! TTTGTGTGTTGGTTAGTTAA+GGG + chr4_2:44106216-44106235 Msa0601430:intron 30.0%
ATACAAATATAGGTAGGACA+TGG + chr4_2:44106457-44106476 Msa0601430:intron 30.0%
TACAAATATAGGTAGGACAT+GGG + chr4_2:44106458-44106477 Msa0601430:intron 30.0%
! GGCATAGTAATTTGTCAAAA+AGG + chr4_2:44106480-44106499 Msa0601430:intron 30.0%
TTTGTTAATCTTTCCCTGAT+GGG - chr4_2:44106693-44106712 None:intergenic 30.0%
! TTTTGTTAATCTTTCCCTGA+TGG - chr4_2:44106694-44106713 None:intergenic 30.0%
TAAGCTAGGTCAAATAATTC+AGG + chr4_2:44106734-44106753 Msa0601430:intron 30.0%
! TCATCTTTGATTTCTTCATG+AGG - chr4_2:44106943-44106962 None:intergenic 30.0%
! TTTTCCATTAGATGCATATG+TGG + chr4_2:44107069-44107088 Msa0601430:intron 30.0%
TTTCCATTAGATGCATATGT+GGG + chr4_2:44107070-44107089 Msa0601430:intron 30.0%
!! AGAGTTCTAAAGTCTTTCAA+AGG - chr4_2:44107224-44107243 None:intergenic 30.0%
! GTTTTCTTTTGTAGTGAGTT+TGG - chr4_2:44107247-44107266 None:intergenic 30.0%
ACTCACTACAAAAGAAAACA+TGG + chr4_2:44107248-44107267 Msa0601430:CDS 30.0%
! CCACATTTTCTACACATAAA+TGG - chr4_2:44107281-44107300 None:intergenic 30.0%
CCATTTATGTGTAGAAAATG+TGG + chr4_2:44107278-44107297 Msa0601430:CDS 30.0%
AAAAGAATTGTGGCAAGTTA+TGG + chr4_2:44107339-44107358 Msa0601430:CDS 30.0%
GATCTCTCAAAGATCATATT+AGG + chr4_2:44107396-44107415 Msa0601430:CDS 30.0%
!! CATATTAGGTCTTTTGGAAA+AGG + chr4_2:44107410-44107429 Msa0601430:CDS 30.0%
!!! GCTTTTTCAACTTTTTCTAG+TGG - chr4_2:44107579-44107598 None:intergenic 30.0%
CACTGAAAAGTGATTAAACT+CGG - chr4_2:44107690-44107709 None:intergenic 30.0%
!!! AAATCCTTTTGGTAATGAAG+CGG - chr4_2:44107977-44107996 None:intergenic 30.0%
! CTTACATACAGAAATCCTTT+TGG - chr4_2:44107988-44108007 None:intergenic 30.0%
CAAACCATCATATAAGTGCT+TGG + chr4_2:44103413-44103432 Msa0601430:five_prime_UTR 35.0%
GAAACCAAGCACTTATATGA+TGG - chr4_2:44103420-44103439 None:intergenic 35.0%
ACTCATCAAGGTAAAGAGTA+TGG + chr4_2:44103440-44103459 Msa0601430:exon 35.0%
AACTCAAAACCCTCAATTTG+TGG - chr4_2:44103645-44103664 None:intergenic 35.0%
CAAAGAAGAAAAAGAGACTG+TGG + chr4_2:44103665-44103684 Msa0601430:CDS 35.0%
!! AGATAGGTTTTAGTGTCATG+AGG - chr4_2:44103708-44103727 None:intergenic 35.0%
CAATAGGTATAACAACATGC+AGG + chr4_2:44103869-44103888 Msa0601430:CDS 35.0%
! TAAGCTAGCTTATAGCTTGT+TGG + chr4_2:44104176-44104195 Msa0601430:intron 35.0%
CAAAAAACGCTATAAGCTAG+TGG - chr4_2:44104255-44104274 None:intergenic 35.0%
GGTAAAATTAGCTGTTCAAG+TGG - chr4_2:44104782-44104801 None:intergenic 35.0%
!! TTTTTCACTAAGGGTGTGTT+TGG - chr4_2:44104933-44104952 None:intergenic 35.0%
TATGGTGATCTCTCGTTATT+GGG - chr4_2:44105428-44105447 None:intergenic 35.0%
TTATGGTGATCTCTCGTTAT+TGG - chr4_2:44105429-44105448 None:intergenic 35.0%
!! ATATCTCTCGGTGTTTGTTA+TGG - chr4_2:44105446-44105465 None:intergenic 35.0%
AACAAACACCGAGAGATATA+TGG + chr4_2:44105447-44105466 Msa0601430:intron 35.0%
ATATATGGAGAGAAATCGGA+TGG + chr4_2:44105462-44105481 Msa0601430:intron 35.0%
AAGAAGAGAAAAGTTAGGGA+AGG - chr4_2:44105886-44105905 None:intergenic 35.0%
ACAAAGCAGACAATATTCCA+GGG - chr4_2:44106201-44106220 None:intergenic 35.0%
ATATTGTCTGCTTTGTGTGT+TGG + chr4_2:44106205-44106224 Msa0601430:intron 35.0%
!! CTTTGTGTGTTGGTTAGTTA+AGG + chr4_2:44106215-44106234 Msa0601430:intron 35.0%
ACAAATATAGGTAGGACATG+GGG + chr4_2:44106459-44106478 Msa0601430:intron 35.0%
! TAATTTGTCAAAAAGGGGGT+AGG + chr4_2:44106487-44106506 Msa0601430:intron 35.0%
TTGTTAATCTTTCCCTGATG+GGG - chr4_2:44106692-44106711 None:intergenic 35.0%
TTCCATTAGATGCATATGTG+GGG + chr4_2:44107071-44107090 Msa0601430:intron 35.0%
CATGGATCTGAATTTAGGAA+AGG + chr4_2:44107095-44107114 Msa0601430:CDS 35.0%
AGGACTCATGAAAAGAATTG+TGG + chr4_2:44107329-44107348 Msa0601430:CDS 35.0%
AAGTTATGGTATTGCACTTG+TGG + chr4_2:44107353-44107372 Msa0601430:CDS 35.0%
AAAGCTTGATCATCAATCGA+AGG - chr4_2:44107449-44107468 None:intergenic 35.0%
ATAAATACGGTTACCTCAAG+TGG + chr4_2:44107858-44107877 Msa0601430:three_prime_UTR 35.0%
TTCTCATAGTAATAGAGGGT+AGG + chr4_2:44107899-44107918 Msa0601430:three_prime_UTR 35.0%
TTATCCGCTTCATTACCAAA+AGG + chr4_2:44107970-44107989 Msa0601430:three_prime_UTR 35.0%
! GGTAAAGAGTATGGCTATGA+TGG + chr4_2:44103449-44103468 Msa0601430:exon 40.0%
! TATGATGGAGTGTGATGTAG+AGG + chr4_2:44103464-44103483 Msa0601430:CDS 40.0%
TGGTATCCAAAACCTTTGGA+AGG - chr4_2:44103787-44103806 None:intergenic 40.0%
!! GAGTTGGTATCCAAAACCTT+TGG - chr4_2:44103791-44103810 None:intergenic 40.0%
CAAATTGCATAGGTCCAACA+AGG - chr4_2:44103824-44103843 None:intergenic 40.0%
ATGGAGCAAGCAAATTGCAT+AGG - chr4_2:44103834-44103853 None:intergenic 40.0%
!! TTTGTGACTTGCTCGTAGAT+TGG + chr4_2:44104479-44104498 Msa0601430:intron 40.0%
CCTTGCCACTCAAAAAATGA+AGG - chr4_2:44105149-44105168 None:intergenic 40.0%
!!! CCTTCATTTTTTGAGTGGCA+AGG + chr4_2:44105146-44105165 Msa0601430:intron 40.0%
! CTCGTTATTGGGACTCTTTT+GGG - chr4_2:44105417-44105436 None:intergenic 40.0%
! TCTCGTTATTGGGACTCTTT+TGG - chr4_2:44105418-44105437 None:intergenic 40.0%
TTGCACCTCTCACTCATAAA+AGG + chr4_2:44105578-44105597 Msa0601430:intron 40.0%
! ATGCTCCTTTTATGAGTGAG+AGG - chr4_2:44105586-44105605 None:intergenic 40.0%
TGTCAATGAAGTTCTCGTCT+TGG - chr4_2:44105641-44105660 None:intergenic 40.0%
AGCACCTACATTTAGGCATA+CGG + chr4_2:44105696-44105715 Msa0601430:intron 40.0%
TTGTCCGTATGCCTAAATGT+AGG - chr4_2:44105703-44105722 None:intergenic 40.0%
AAAGTGAAGGGAATGCTAGA+GGG - chr4_2:44105965-44105984 None:intergenic 40.0%
!! TTGGGTTGAAAATTAACCCC+TGG + chr4_2:44106181-44106200 Msa0601430:intron 40.0%
CAAAGCAGACAATATTCCAG+GGG - chr4_2:44106200-44106219 None:intergenic 40.0%
CACAAAGCAGACAATATTCC+AGG - chr4_2:44106202-44106221 None:intergenic 40.0%
CTAAAAATAGAGCTAGTGCC+CGG + chr4_2:44106263-44106282 Msa0601430:intron 40.0%
TTTCTACTTAACTGCGAGAG+AGG + chr4_2:44106393-44106412 Msa0601430:intron 40.0%
TTCTACTTAACTGCGAGAGA+GGG + chr4_2:44106394-44106413 Msa0601430:intron 40.0%
TCCATTAGATGCATATGTGG+GGG + chr4_2:44107072-44107091 Msa0601430:intron 40.0%
! TCTTTCAAAGGCTTAGCTCT+TGG - chr4_2:44107212-44107231 None:intergenic 40.0%
!! GGGAAAACATTTGCTGTCAA+AGG + chr4_2:44107299-44107318 Msa0601430:CDS 40.0%
!! CATTTGCTGTCAAAGGTGAT+TGG + chr4_2:44107306-44107325 Msa0601430:CDS 40.0%
TGATGATCAAGCTTTCGAAG+AGG + chr4_2:44107454-44107473 Msa0601430:CDS 40.0%
ATATTGCTGAGGCATGAACA+TGG + chr4_2:44107749-44107768 Msa0601430:three_prime_UTR 40.0%
TTCATCTACTTCACCACTTG+AGG - chr4_2:44107874-44107893 None:intergenic 40.0%
GTGCTTGGTTTCACTCATCA+AGG + chr4_2:44103428-44103447 Msa0601430:five_prime_UTR 45.0%
! CGTGAAGTGCCACAAATTGA+GGG + chr4_2:44103633-44103652 Msa0601430:CDS 45.0%
! GAGACTGTGGCTTTGCATAT+TGG + chr4_2:44103678-44103697 Msa0601430:CDS 45.0%
CTGATAGCTGATAAGCTAGC+TGG - chr4_2:44104889-44104908 None:intergenic 45.0%
ACTATAAGGTCTAGCAGGAG+AGG + chr4_2:44105070-44105089 Msa0601430:intron 45.0%
CTATAAGGTCTAGCAGGAGA+GGG + chr4_2:44105071-44105090 Msa0601430:intron 45.0%
TATGGAGAGAAATCGGATGG+AGG + chr4_2:44105465-44105484 Msa0601430:intron 45.0%
ATGGAGAGAAATCGGATGGA+GGG + chr4_2:44105466-44105485 Msa0601430:intron 45.0%
GCATACAGGATTGTTGGAGA+TGG - chr4_2:44105533-44105552 None:intergenic 45.0%
GATAGGGCATACAGGATTGT+TGG - chr4_2:44105539-44105558 None:intergenic 45.0%
CTCAAACTGATAGGGCATAC+AGG - chr4_2:44105547-44105566 None:intergenic 45.0%
ATGCCCTATCAGTTTGAGCA+CGG + chr4_2:44105549-44105568 Msa0601430:intron 45.0%
ATCCCGTGCTCAAACTGATA+GGG - chr4_2:44105555-44105574 None:intergenic 45.0%
TATCCCGTGCTCAAACTGAT+AGG - chr4_2:44105556-44105575 None:intergenic 45.0%
TATCAGTTTGAGCACGGGAT+AGG + chr4_2:44105555-44105574 Msa0601430:intron 45.0%
TCGTCTTGGAAACGACTCAT+TGG - chr4_2:44105627-44105646 None:intergenic 45.0%
TCGAGCTAGCTATAGCTAGA+TGG + chr4_2:44105929-44105948 Msa0601430:intron 45.0%
GAAAGTGAAGGGAATGCTAG+AGG - chr4_2:44105966-44105985 None:intergenic 45.0%
GTGTAGGACATGTAACATCG+AGG + chr4_2:44106509-44106528 Msa0601430:intron 45.0%
TTGACTTATCCTACCCCATC+AGG + chr4_2:44106676-44106695 Msa0601430:intron 45.0%
TGACTTATCCTACCCCATCA+GGG + chr4_2:44106677-44106696 Msa0601430:intron 45.0%
TAATCTTTCCCTGATGGGGT+AGG - chr4_2:44106688-44106707 None:intergenic 45.0%
GCAACAATTAGGGGTAAGCT+AGG + chr4_2:44106720-44106739 Msa0601430:intron 45.0%
AAAGGACCAGACTCACTAAG+AGG + chr4_2:44107113-44107132 Msa0601430:CDS 45.0%
CCTTGAACACAACAGTAGCA+TGG - chr4_2:44107167-44107186 None:intergenic 45.0%
CCATGCTACTGTTGTGTTCA+AGG + chr4_2:44107164-44107183 Msa0601430:CDS 45.0%
TTGCTGTCAAAGGTGATTGG+AGG + chr4_2:44107309-44107328 Msa0601430:CDS 45.0%
TCAAGCTTTCGAAGAGGAGA+AGG + chr4_2:44107460-44107479 Msa0601430:CDS 45.0%
CAAGCTTTCGAAGAGGAGAA+GGG + chr4_2:44107461-44107480 Msa0601430:CDS 45.0%
TGTTTAGCTACCGAGCACTT+AGG + chr4_2:44107775-44107794 Msa0601430:three_prime_UTR 45.0%
GTTTAGCTACCGAGCACTTA+GGG + chr4_2:44107776-44107795 Msa0601430:three_prime_UTR 45.0%
TCATCACTACCCTAAGTGCT+CGG - chr4_2:44107788-44107807 None:intergenic 45.0%
!! TTATTAAAATAAAAAATGTT+TGG - chr4_2:44104803-44104822 None:intergenic 5.0%
!!! ATTATAATTTATCTTTTTTT+AGG - chr4_2:44106829-44106848 None:intergenic 5.0%
! GCGTGAAGTGCCACAAATTG+AGG + chr4_2:44103632-44103651 Msa0601430:CDS 50.0%
ACAAGGATCTGAGCAGGAGT+TGG - chr4_2:44103807-44103826 None:intergenic 50.0%
ACTCCTGCTCAGATCCTTGT+TGG + chr4_2:44103807-44103826 Msa0601430:CDS 50.0%
CTGGTAGCTGAAAAGCTAGC+TGG - chr4_2:44104870-44104889 None:intergenic 50.0%
TGGAGAGAAATCGGATGGAG+GGG + chr4_2:44105467-44105486 Msa0601430:intron 50.0%
GAGCAGACATAAGACCAACC+AGG + chr4_2:44105497-44105516 Msa0601430:intron 50.0%
TGCCCTATCAGTTTGAGCAC+GGG + chr4_2:44105550-44105569 Msa0601430:intron 50.0%
GAATGCTAGAGGGACACAAG+AGG - chr4_2:44105955-44105974 None:intergenic 50.0%
GTCAAAAAGGGGGTAGGTGT+AGG + chr4_2:44106493-44106512 Msa0601430:intron 50.0%
GCCCCCACATATGCATCTAA+TGG - chr4_2:44107076-44107095 None:intergenic 50.0%
TAGATGCATATGTGGGGGCA+TGG + chr4_2:44107077-44107096 Msa0601430:intron 50.0%
! GGGGGCATGGATCTGAATTT+AGG + chr4_2:44107090-44107109 Msa0601430:CDS 50.0%
TGTGTGCCTCTTAGTGAGTC+TGG - chr4_2:44107122-44107141 None:intergenic 50.0%
CACAACCAGCTGCAATGCTA+AGG + chr4_2:44107138-44107157 Msa0601430:CDS 50.0%
GAGGAGAAGGGATGTGTTAC+TGG + chr4_2:44107473-44107492 Msa0601430:CDS 50.0%
GGTCCAACAAGGATCTGAGC+AGG - chr4_2:44103813-44103832 None:intergenic 55.0%
ATGGATCACGATCGCCTGGT+TGG - chr4_2:44105514-44105533 None:intergenic 55.0%
! GGTAGCCTTAGCATTGCAGC+TGG - chr4_2:44107146-44107165 None:intergenic 55.0%
GGAGATGGATCACGATCGCC+TGG - chr4_2:44105518-44105537 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 44103348 44108064 44103348 ID=Msa0601430;Name=Msa0601430
chr4_2 mRNA 44103348 44108064 44103348 ID=Msa0601430-mRNA-1;Parent=Msa0601430;Name=Msa0601430-mRNA-1;_AED=0.00;_eAED=0.00;_QI=111|1|1|1|1|1|2|538|292
chr4_2 exon 44103348 44103890 44103348 ID=Msa0601430-mRNA-1:exon:9691;Parent=Msa0601430-mRNA-1
chr4_2 exon 44107080 44108064 44107080 ID=Msa0601430-mRNA-1:exon:9692;Parent=Msa0601430-mRNA-1
chr4_2 five_prime_UTR 44103348 44103458 44103348 ID=Msa0601430-mRNA-1:five_prime_utr;Parent=Msa0601430-mRNA-1
chr4_2 CDS 44103459 44103890 44103459 ID=Msa0601430-mRNA-1:cds;Parent=Msa0601430-mRNA-1
chr4_2 CDS 44107080 44107526 44107080 ID=Msa0601430-mRNA-1:cds;Parent=Msa0601430-mRNA-1
chr4_2 three_prime_UTR 44107527 44108064 44107527 ID=Msa0601430-mRNA-1:three_prime_utr;Parent=Msa0601430-mRNA-1
Gene Sequence

>Msa0601430

ATGGCTATGATGGAGTGTGATGTAGAGGACAATAATTTCATTGAGTGGCTCAAACCATCTAATTCCTCTCAATCATATCTAACTTCATCATCATCATCTTCTTCTTCTACCACTCGAAATGAAACTATACAATTCTTTCCTATTTTGAGTGCAAAGTTTTCAAAGGATGAAGAGCGTGAAGTGCCACAAATTGAGGGTTTTGAGTTCAAAGAAGAAAAAGAGACTGTGGCTTTGCATATTGGATTACCTCATGACACTAAAACCTATCTTCATGAGAAGAAGTTTTTCCATGTTAAAGAAGAAGAAGAAAAGCCTTCTAAAAAAACCTTCCAAAGGTTTTGGATACCAACTCCTGCTCAGATCCTTGTTGGACCTATGCAATTTGCTTGCTCCATATGCAACAAAACCTTCAATAGGTATAACAACATGCAGATGCATATGTGGGGGCATGGATCTGAATTTAGGAAAGGACCAGACTCACTAAGAGGCACACAACCAGCTGCAATGCTAAGGCTACCATGCTACTGTTGTGTTCAAGGTTGCAAGAACAACATCAATCATCCAAGAGCTAAGCCTTTGAAAGACTTTAGAACTCTCCAAACTCACTACAAAAGAAAACATGGAACAAAACCATTTATGTGTAGAAAATGTGGGAAAACATTTGCTGTCAAAGGTGATTGGAGGACTCATGAAAAGAATTGTGGCAAGTTATGGTATTGCACTTGTGGTTCAGATTTTAAACACAAAAGATCTCTCAAAGATCATATTAGGTCTTTTGGAAAAGGTCATCATCGTCTTCCTTCGATTGATGATCAAGCTTTCGAAGAGGAGAAGGGATGTGTTACTGGCTCTGAAGAAGATGAATTTGCTCGTACATGA
Protein sequence

>Msa0601430

MAMMECDVEDNNFIEWLKPSNSSQSYLTSSSSSSSSTTRNETIQFFPILSAKFSKDEEREVPQIEGFEFKEEKETVALHIGLPHDTKTYLHEKKFFHVKEEEEKPSKKTFQRFWIPTPAQILVGPMQFACSICNKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPCYCCVQGCKNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKCGKTFAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHHRLPSIDDQAFEEEKGCVTGSEEDEFART*