AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0683010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0683010 MtrunA17_Chr4g0029671 94.325 793 21 2 1 770 1 792 0.0 1541
Msa0683010 MtrunA17_Chr2g0326281 69.028 833 185 14 1 770 1 823 0.0 1075
Msa0683010 MtrunA17_Chr2g0282961 56.150 374 156 4 46 419 45 410 1.79e-138 422
Msa0683010 MtrunA17_Chr4g0046371 49.378 482 206 10 49 505 33 501 3.43e-138 424
Msa0683010 MtrunA17_Chr8g0385791 49.751 402 190 3 38 438 43 433 4.27e-133 415
Msa0683010 MtrunA17_Chr8g0385791 49.550 111 54 1 636 744 705 815 9.32e-30 126
Msa0683010 MtrunA17_Chr2g0276781 50.541 370 170 3 52 420 21 378 7.86e-124 385
Msa0683010 MtrunA17_Chr2g0276781 50.758 132 62 2 631 759 537 668 9.99e-32 132
Msa0683010 MtrunA17_Chr2g0285461 52.033 369 155 8 54 415 23 376 3.80e-111 359
Msa0683010 MtrunA17_Chr2g0285461 43.617 94 51 2 637 729 771 863 1.92e-18 90.5
Msa0683010 MtrunA17_Chr5g0433301 50.674 371 157 6 54 415 24 377 7.71e-111 357
Msa0683010 MtrunA17_Chr5g0433301 44.186 86 46 2 645 729 719 803 2.92e-17 86.7
Msa0683010 MtrunA17_Chr8g0346711 49.185 368 169 9 52 416 27 379 4.58e-110 350
Msa0683010 MtrunA17_Chr8g0346711 54.945 91 40 1 639 729 556 645 2.23e-24 108
Msa0683010 MtrunA17_Chr3g0109391 50.943 371 156 6 54 415 26 379 6.75e-110 354
Msa0683010 MtrunA17_Chr3g0109391 46.512 86 44 2 645 729 727 811 1.60e-17 87.4
Msa0683010 MtrunA17_Chr8g0376771 50.543 368 161 7 54 415 23 375 1.43e-108 352
Msa0683010 MtrunA17_Chr8g0376771 41.489 94 53 2 637 729 777 869 1.63e-17 87.4
Msa0683010 MtrunA17_Chr4g0009751 47.139 367 176 6 54 416 19 371 1.30e-106 339
Msa0683010 MtrunA17_Chr4g0009751 46.429 84 44 1 625 708 539 621 6.69e-16 82.0
Msa0683010 MtrunA17_Chr1g0156321 52.023 346 151 6 54 396 43 376 3.76e-106 345
Msa0683010 MtrunA17_Chr1g0156321 45.055 91 48 2 641 730 754 843 1.74e-18 90.5
Msa0683010 MtrunA17_Chr7g0239061 45.799 369 181 8 52 416 12 365 3.31e-103 332
Msa0683010 MtrunA17_Chr7g0239061 48.624 109 53 2 624 732 555 660 2.41e-25 112
Msa0683010 MtrunA17_Chr4g0070181 51.009 347 152 5 54 396 23 355 5.08e-99 331
Msa0683010 MtrunA17_Chr4g0070181 47.423 97 49 2 636 731 989 1084 1.54e-21 100
Msa0683010 MtrunA17_Chr2g0301251 49.709 344 161 3 54 396 23 355 1.96e-98 329
Msa0683010 MtrunA17_Chr2g0301251 47.423 97 49 2 636 731 981 1076 6.72e-21 98.6
Msa0683010 MtrunA17_Chr8g0389081 49.711 346 160 7 54 396 32 366 2.48e-93 315
Msa0683010 MtrunA17_Chr8g0389081 47.826 92 46 2 641 731 985 1075 1.51e-21 100
Msa0683010 MtrunA17_Chr2g0326761 41.514 383 172 7 54 399 11 378 8.84e-82 275
Msa0683010 MtrunA17_Chr1g0181211 37.530 413 204 8 54 426 27 425 4.15e-76 259
Msa0683010 MtrunA17_Chr1g0199681 39.901 406 180 11 54 416 94 478 6.05e-76 259
Msa0683010 MtrunA17_Chr4g0028971 38.443 411 186 6 54 416 12 403 1.16e-72 251
Msa0683010 MtrunA17_Chr7g0264171 34.557 463 217 13 54 460 31 463 6.69e-65 227
Msa0683010 MtrunA17_Chr8g0356211 42.066 271 141 7 174 439 2 261 8.53e-62 210
Msa0683010 MtrunA17_Chr3g0115271 35.606 396 207 8 54 416 19 399 2.13e-60 214
Msa0683010 MtrunA17_Chr5g0424931 35.806 391 200 11 54 416 19 386 1.54e-58 207
Msa0683010 MtrunA17_Chr7g0264161 38.629 321 170 8 63 376 1 301 1.96e-57 198
Msa0683010 MtrunA17_Chr5g0417281 34.959 369 204 11 54 414 11 351 6.30e-52 189
Msa0683010 MtrunA17_Chr5g0436761 34.795 365 210 9 54 413 12 353 4.36e-50 182
Msa0683010 MtrunA17_Chr1g0178011 31.720 372 215 9 54 412 12 357 6.89e-47 173
Msa0683010 MtrunA17_Chr5g0417211 34.426 366 193 15 54 409 12 340 5.79e-44 164
Msa0683010 MtrunA17_Chr2g0289221 34.853 307 160 8 54 348 20 298 5.70e-43 159
Msa0683010 MtrunA17_Chr2g0277461 31.335 367 225 9 54 417 13 355 3.31e-39 151
Msa0683010 MtrunA17_Chr5g0424741 28.866 388 240 12 54 417 12 387 4.61e-37 146
Msa0683010 MtrunA17_Chr2g0277531 31.000 300 174 12 54 345 20 294 8.47e-32 126
Msa0683010 MtrunA17_Chr5g0425661 34.450 209 125 3 54 262 37 233 1.80e-31 123
Msa0683010 MtrunA17_Chr5g0424801 28.610 367 234 11 54 414 12 356 4.87e-30 122
Msa0683010 MtrunA17_Chr5g0425261 28.426 394 245 13 54 441 12 374 9.87e-29 119
Msa0683010 MtrunA17_Chr1g0178071 29.630 189 127 3 138 320 48 236 1.02e-11 67.0
Msa0683010 MtrunA17_Chr1g0156301 36.667 90 41 2 641 730 177 250 3.27e-11 64.7
Msa0683010 MtrunA17_Chr7g0276471 36.111 108 68 1 164 271 116 222 7.36e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0683010 AT5G60450.2 59.788 756 245 12 48 770 35 764 0.0 825
Msa0683010 AT5G60450.1 59.840 752 243 12 52 770 63 788 0.0 822
Msa0683010 AT2G33860.1 50.106 473 189 10 53 512 53 491 2.00e-141 429
Msa0683010 AT5G62000.2 52.000 375 168 3 52 425 59 422 1.07e-131 412
Msa0683010 AT5G62000.2 53.774 106 49 0 630 735 722 827 9.93e-30 127
Msa0683010 AT5G62000.5 52.000 375 168 3 52 425 59 422 1.07e-131 412
Msa0683010 AT5G62000.5 53.774 106 49 0 630 735 722 827 9.93e-30 127
Msa0683010 AT5G62000.3 52.000 375 168 3 52 425 59 422 1.07e-131 412
Msa0683010 AT5G62000.3 53.774 106 49 0 630 735 722 827 9.93e-30 127
Msa0683010 AT5G62000.1 52.000 375 168 3 52 425 59 422 1.07e-131 412
Msa0683010 AT5G62000.1 53.774 106 49 0 630 735 722 827 9.93e-30 127
Msa0683010 AT5G62000.4 52.000 375 168 3 52 425 59 422 1.55e-131 412
Msa0683010 AT5G62000.4 50.435 115 57 0 630 744 722 836 9.25e-30 127
Msa0683010 AT1G59750.4 48.656 372 164 5 54 416 22 375 2.81e-117 369
Msa0683010 AT1G59750.4 54.545 110 44 1 627 730 517 626 9.38e-30 126
Msa0683010 AT1G59750.1 48.656 372 164 5 54 416 22 375 3.91e-117 368
Msa0683010 AT1G59750.1 54.545 110 44 1 627 730 522 631 9.86e-30 126
Msa0683010 AT1G59750.3 48.656 372 164 5 54 416 22 375 3.91e-117 368
Msa0683010 AT1G59750.3 54.545 110 44 1 627 730 522 631 9.86e-30 126
Msa0683010 AT1G59750.2 48.656 372 164 5 54 416 22 375 4.00e-117 368
Msa0683010 AT1G59750.2 54.545 110 44 1 627 730 519 628 9.38e-30 126
Msa0683010 AT5G37020.2 51.639 366 161 6 54 415 22 375 4.42e-112 358
Msa0683010 AT5G37020.2 50.725 69 32 2 641 708 705 772 1.21e-14 78.6
Msa0683010 AT5G37020.1 51.639 366 161 6 54 415 22 375 1.39e-111 358
Msa0683010 AT5G37020.1 46.667 90 46 2 641 729 705 793 2.86e-18 90.1
Msa0683010 AT3G61830.1 49.162 358 165 6 41 396 12 354 2.91e-111 351
Msa0683010 AT3G61830.1 52.000 100 46 2 631 730 480 577 5.39e-24 107
Msa0683010 AT1G30330.1 47.073 427 180 9 54 447 23 436 1.82e-109 355
Msa0683010 AT1G30330.1 44.118 102 53 3 631 729 782 882 6.26e-19 92.4
Msa0683010 AT1G30330.3 47.073 427 180 9 54 447 25 438 1.95e-109 355
Msa0683010 AT1G30330.3 44.118 102 53 3 631 729 784 884 6.11e-19 92.4
Msa0683010 AT1G30330.2 47.073 427 180 9 54 447 25 438 1.95e-109 355
Msa0683010 AT1G30330.2 44.118 102 53 3 631 729 784 884 6.11e-19 92.4
Msa0683010 AT2G46530.1 46.486 370 177 7 52 416 19 372 3.17e-108 343
Msa0683010 AT2G46530.1 40.816 147 53 2 616 729 432 577 2.05e-26 115
Msa0683010 AT2G46530.3 46.486 370 177 7 52 416 40 393 7.60e-108 343
Msa0683010 AT2G46530.3 40.816 147 53 2 616 729 453 598 2.49e-26 115
Msa0683010 AT2G33860.2 50.970 361 137 8 165 512 1 334 2.71e-105 330
Msa0683010 AT4G23980.1 46.787 389 179 10 52 432 10 378 6.03e-104 333
Msa0683010 AT4G23980.1 52.294 109 50 2 625 732 506 613 4.52e-27 117
Msa0683010 AT4G23980.2 46.753 385 176 10 52 425 10 376 1.22e-103 332
Msa0683010 AT4G23980.2 52.294 109 50 2 625 732 504 611 4.60e-27 117
Msa0683010 AT1G19850.2 49.582 359 164 8 41 396 33 377 2.87e-102 335
Msa0683010 AT1G19850.2 43.564 101 55 2 631 730 772 871 6.73e-18 89.4
Msa0683010 AT1G19850.1 49.582 359 164 8 41 396 44 388 3.10e-102 335
Msa0683010 AT1G19850.1 43.564 101 55 2 631 730 783 882 6.62e-18 89.4
Msa0683010 AT1G19220.1 50.725 345 156 4 54 396 23 355 4.69e-98 328
Msa0683010 AT1G19220.1 48.454 97 48 2 636 731 953 1048 9.69e-22 101
Msa0683010 AT3G61830.2 50.825 303 134 5 94 396 16 303 3.63e-97 312
Msa0683010 AT3G61830.2 52.000 100 46 2 631 730 429 526 3.51e-24 108
Msa0683010 AT5G20730.2 50.144 347 155 5 54 396 24 356 1.58e-95 322
Msa0683010 AT5G20730.2 46.392 97 50 2 636 731 1032 1127 1.50e-20 97.8
Msa0683010 AT5G20730.3 50.000 348 155 6 54 396 24 357 4.99e-94 318
Msa0683010 AT5G20730.3 46.392 97 50 2 636 731 1033 1128 1.29e-20 98.2
Msa0683010 AT5G20730.1 50.000 348 155 6 54 396 24 357 9.86e-94 317
Msa0683010 AT5G20730.1 46.392 97 50 2 636 731 1033 1128 1.58e-20 97.8
Msa0683010 AT1G35540.1 39.948 383 208 7 49 428 22 385 1.08e-87 289
Msa0683010 AT1G35540.1 52.577 97 45 1 633 729 502 597 9.65e-25 110
Msa0683010 AT1G34310.1 40.541 370 197 7 49 416 22 370 1.17e-85 283
Msa0683010 AT1G34310.1 53.846 91 41 1 633 723 503 592 9.46e-23 103
Msa0683010 AT5G37020.3 54.023 261 118 2 156 415 21 280 2.13e-85 286
Msa0683010 AT5G37020.3 46.667 90 46 2 641 729 610 698 2.12e-18 90.5
Msa0683010 AT1G34170.1 40.984 366 194 8 52 414 23 369 3.07e-85 280
Msa0683010 AT1G35240.1 41.261 349 186 5 49 396 22 352 6.71e-84 278
Msa0683010 AT1G35240.1 54.737 95 42 1 633 727 489 582 6.37e-24 107
Msa0683010 AT1G34410.1 39.572 374 195 7 49 420 22 366 1.19e-83 278
Msa0683010 AT1G34410.1 32.593 270 129 9 473 727 365 596 1.60e-24 109
Msa0683010 AT1G35520.1 40.000 370 199 7 49 416 22 370 1.51e-81 272
Msa0683010 AT1G35520.1 50.549 91 44 1 633 723 503 592 4.27e-22 101
Msa0683010 AT2G28350.2 40.796 402 184 8 54 413 10 399 7.62e-81 272
Msa0683010 AT2G28350.1 40.796 402 184 8 54 413 10 399 7.89e-81 273
Msa0683010 AT2G46530.2 49.042 261 127 4 158 416 29 285 1.16e-80 268
Msa0683010 AT2G46530.2 40.816 147 53 2 616 729 345 490 8.87e-27 115
Msa0683010 AT4G30080.1 40.201 398 191 7 54 416 19 404 6.76e-80 270
Msa0683010 AT1G34390.1 40.331 362 190 7 49 404 22 363 3.86e-79 266
Msa0683010 AT1G34390.1 31.535 241 116 7 497 723 385 590 8.49e-22 100
Msa0683010 AT1G34170.2 38.525 366 177 8 52 414 23 343 1.88e-73 247
Msa0683010 AT1G34170.3 38.525 366 177 8 52 414 23 343 3.95e-72 246
Msa0683010 AT1G34170.3 39.815 108 57 2 629 729 414 520 6.89e-19 91.7
Msa0683010 AT1G77850.1 32.080 399 219 8 55 418 20 401 1.87e-55 201
Msa0683010 AT1G77850.2 32.080 399 219 8 55 418 20 401 2.00e-55 201
Msa0683010 AT1G43950.1 42.009 219 107 5 49 265 22 222 3.57e-48 170
Msa0683010 AT4G01500.1 38.043 92 54 1 164 255 34 122 2.21e-11 66.6
Msa0683010 AT2G46870.1 35.385 130 80 3 145 271 14 142 2.26e-11 66.2
Msa0683010 AT1G13260.1 35.088 114 70 2 154 263 174 287 7.81e-11 65.1
Msa0683010 AT1G01030.2 36.735 98 61 1 158 255 48 144 8.17e-11 64.7

Find 229 sgRNAs with CRISPR-Local

Find 463 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTTAATTGTCAATCTTTC+TGG 0.134143 4_4:+45352259 None:intergenic
TTTCAGTTATGCAGGCTTTA+TGG 0.176843 4_4:-45353806 Msa0683010:CDS
CATCTTCTCCACTTCTTCTT+TGG 0.185315 4_4:+45352529 None:intergenic
CTTCTTCTTTGGTATATATA+TGG 0.187674 4_4:+45352540 None:intergenic
TGCAACAGATGAAAGGAAAT+TGG 0.198707 4_4:+45356366 None:intergenic
GTTTGGTTTGGGGTGGAATT+TGG 0.205168 4_4:-45352096 Msa0683010:three_prime_UTR
TAGTTAGAGTCTAAAGTTTC+AGG 0.206625 4_4:-45352394 Msa0683010:exon
AATATTGTAAGGTGGGAATT+TGG 0.217869 4_4:-45352034 Msa0683010:three_prime_UTR
GGTATCTCCAATTGTTTAAA+AGG 0.223290 4_4:+45358838 None:intergenic
AACCAAAAGAATCTTGTTTC+TGG 0.233692 4_4:-45356950 Msa0683010:CDS
GTTTCTGCTTCTGCTTCATT+AGG 0.240616 4_4:-45353481 Msa0683010:CDS
TATAATTTGATGTTGCATTT+TGG 0.250991 4_4:-45352330 Msa0683010:three_prime_UTR
TGTAAACTGAAATCCCTTTC+AGG 0.261732 4_4:-45353742 Msa0683010:CDS
TTTATGAATGTGTTTGGTTT+GGG 0.263235 4_4:-45352107 Msa0683010:three_prime_UTR
TTACATTACCTCTATAAATA+TGG 0.265982 4_4:+45357094 None:intergenic
GACATTATCACTCATGAAAT+TGG 0.276302 4_4:+45353603 None:intergenic
CTTCTTCTTATCTTGAACTA+TGG 0.284809 4_4:-45358957 Msa0683010:CDS
TTTGGCATGGAAGGACTTCT+TGG 0.286949 4_4:-45353139 Msa0683010:CDS
CCCTTGACATTGTTATCATT+TGG 0.287764 4_4:+45353439 None:intergenic
TGCCATAAGGAATGTGAAAA+AGG 0.290889 4_4:-45359051 Msa0683010:CDS
CACCAGAAACAAGATTCTTT+TGG 0.294480 4_4:+45356948 None:intergenic
GTACCTACAAATGGAGATAA+TGG 0.308535 4_4:-45359420 Msa0683010:five_prime_UTR
TCCGCGGTTTCTTCAGTCTT+GGG 0.308610 4_4:+45355554 None:intergenic
ACACAATTCTCAAGAGATAT+TGG 0.310800 4_4:+45352190 None:intergenic
TTTCTGCTTCTGCTTCATTA+GGG 0.316596 4_4:-45353480 Msa0683010:CDS
GATTCAGGAAGACCATTTCT+AGG 0.323113 4_4:+45356415 None:intergenic
AGTGAACTGGAGAAACTATT+TGG 0.334062 4_4:-45353157 Msa0683010:CDS
TGATTACCAACAATTGATTC+AGG 0.338555 4_4:+45356400 None:intergenic
TCCTGGAGCTTATGCTCATT+TGG 0.345344 4_4:+45353508 None:intergenic
GTTGATTGGAATAAATGATT+TGG 0.346668 4_4:-45355937 Msa0683010:CDS
TTTGAAGGTTCAATAATAAC+TGG 0.349549 4_4:+45352455 None:intergenic
GAAGTGGAGAAGATGACATT+TGG 0.355497 4_4:-45352521 Msa0683010:CDS
TGACTTTGTAGGGGTGAAAA+TGG 0.355720 4_4:-45356472 Msa0683010:intron
GCAAATTCCTGCAAACTATT+CGG 0.356320 4_4:-45353412 Msa0683010:CDS
ATTTACAGAACACTTCAAAA+AGG 0.356719 4_4:-45353357 Msa0683010:CDS
AAGTGGAGAAGATGACATTT+GGG 0.357385 4_4:-45352520 Msa0683010:CDS
AACCTCATCATTCTCCTTGT+TGG 0.359424 4_4:+45358494 None:intergenic
ATAGATGGCCTAAATCAAAA+TGG 0.363531 4_4:-45355908 Msa0683010:CDS
AGAAACAAAGACAGTGTTCA+TGG 0.366292 4_4:-45359121 Msa0683010:exon
GTGATGCTGTGCTCTTTCTA+AGG 0.367166 4_4:-45356928 Msa0683010:intron
ACCACAACATTTCCTTTCTT+AGG 0.367433 4_4:+45358904 None:intergenic
TGATTTCAACATCGGAGCTT+GGG 0.367716 4_4:-45353713 Msa0683010:CDS
GTCCGCGGTTTCTTCAGTCT+TGG 0.371861 4_4:+45355553 None:intergenic
AGAAAAGAAGTTGGAAGATC+TGG 0.374337 4_4:-45353544 Msa0683010:CDS
CTCCACACCATGCAGGTCTT+TGG 0.378354 4_4:+45357128 None:intergenic
GAAAACATGAAACATGCTTT+TGG 0.379376 4_4:+45356330 None:intergenic
ACTATCGATGGTGTGTTAAA+CGG 0.382747 4_4:+45353580 None:intergenic
AGGCGGCATCTGCTCACAAC+TGG 0.384596 4_4:-45356989 Msa0683010:CDS
CATCAAAACCTGGCATCAAC+TGG 0.390598 4_4:-45353874 Msa0683010:CDS
ATCAAAATGGAGGTGCTTGA+TGG 0.392147 4_4:-45355895 Msa0683010:intron
ATTCCATTATCTCCATTTGT+AGG 0.392289 4_4:+45359417 None:intergenic
CTTCTTGGAGATTCTGATAA+GGG 0.392299 4_4:-45353124 Msa0683010:CDS
AAAGAAGTTGAGGAATTAGA+AGG 0.393061 4_4:-45357718 Msa0683010:CDS
CTATCGATGGTGTGTTAAAC+GGG 0.397418 4_4:+45353581 None:intergenic
TCAAGAATCCAGTGAGTATA+GGG 0.398915 4_4:-45356108 Msa0683010:CDS
CACAAGCAAGGAAGCTTAGT+TGG 0.408419 4_4:-45353226 Msa0683010:CDS
CTATTCGGCTTTCCTTTGTC+TGG 0.408734 4_4:-45353397 Msa0683010:CDS
GTTCAAAATGAGAATTGAAA+TGG 0.409109 4_4:-45356080 Msa0683010:CDS
TGAAAATGGAGAGCTGAGAT+TGG 0.413215 4_4:-45356458 Msa0683010:CDS
GCAACAGATGAAAGGAAATT+GGG 0.413332 4_4:+45356367 None:intergenic
TTTGATTTAGGCCATCTATA+GGG 0.413502 4_4:+45355912 None:intergenic
CCAACTGAGGAAGACTTTGA+AGG 0.413561 4_4:+45352440 None:intergenic
GTTAATCCTTTCAGTTATGC+AGG 0.425087 4_4:-45353814 Msa0683010:CDS
GGAGATGAAGAGGGAGATGG+AGG 0.430363 4_4:-45357697 Msa0683010:CDS
GGAACATTTAAAATATTGTA+AGG 0.430487 4_4:-45352045 Msa0683010:three_prime_UTR
CATTTAAAATATTGTAAGGT+GGG 0.431835 4_4:-45352041 Msa0683010:three_prime_UTR
ACTACTGTTGGAGAATAATC+TGG 0.435153 4_4:+45352413 None:intergenic
TCAGTTGGCAGGGATGCATA+TGG 0.435408 4_4:-45357746 Msa0683010:intron
AGCAGGAATCAGTGGAATGA+TGG 0.437544 4_4:-45355225 Msa0683010:CDS
TTCCTATTCCAGTTGATGCC+AGG 0.437834 4_4:+45353866 None:intergenic
CTGATTTCAACATCGGAGCT+TGG 0.438282 4_4:-45353714 Msa0683010:CDS
TGGGGAAGACTGAATGCTTA+GGG 0.438392 4_4:+45355573 None:intergenic
CAGTGGAATGATGGGCTTTG+AGG 0.440411 4_4:-45355216 Msa0683010:CDS
CTTACTTCACTTCCTAAGAA+AGG 0.441936 4_4:-45358916 Msa0683010:CDS
AGGAAAGCCGAATAGTTTGC+AGG 0.443064 4_4:+45353405 None:intergenic
AATTGTGTACTCTAGAATTA+TGG 0.444292 4_4:-45352175 Msa0683010:three_prime_UTR
ATGATTTGGATCCCTATAGA+TGG 0.446543 4_4:-45355923 Msa0683010:CDS
CTCTTCTATGTACCTACAAA+TGG 0.447258 4_4:-45359429 Msa0683010:five_prime_UTR
TGTGGCTGAAGATCATAGTT+TGG 0.447773 4_4:+45358817 None:intergenic
TGATGATACTCATAGCTGTT+TGG 0.448093 4_4:-45352486 Msa0683010:CDS
ACTTCTTGGAGATTCTGATA+AGG 0.448798 4_4:-45353125 Msa0683010:CDS
CAATGATCTTCTGAGTGAAC+TGG 0.449039 4_4:-45353170 Msa0683010:CDS
GGTCTTCCTGAATCAATTGT+TGG 0.449503 4_4:-45356406 Msa0683010:CDS
GAACTATGGCATGCTTGTGC+TGG 0.452079 4_4:-45358943 Msa0683010:CDS
TTCAGCCACAGATCTTCTGC+AGG 0.456602 4_4:-45358804 Msa0683010:CDS
CTTGAAGATGAACAAGTTGA+AGG 0.457374 4_4:+45359000 None:intergenic
TACTCATAGCTGTTTGGATC+AGG 0.457597 4_4:-45352480 Msa0683010:CDS
CTTTAGACTCTAACTACTGT+TGG 0.457649 4_4:+45352401 None:intergenic
TTGGGGAAGACTGAATGCTT+AGG 0.458895 4_4:+45355572 None:intergenic
GAAGGAGATGAAGAGGGAGA+TGG 0.463926 4_4:-45357700 Msa0683010:CDS
AGTTAGAGTCTAAAGTTTCA+GGG 0.465120 4_4:-45352393 Msa0683010:exon
AACCTTGTCCCTATACTCAC+TGG 0.465299 4_4:+45356100 None:intergenic
TGCTGAGCTAACTAGCCAAA+AGG 0.466078 4_4:+45352300 None:intergenic
AACCTGGCATCAACTGGAAT+AGG 0.466535 4_4:-45353868 Msa0683010:CDS
CTCTGGTTCAAAGTATATAG+TGG 0.468208 4_4:-45352003 Msa0683010:three_prime_UTR
CGATCTCCCATGGCGATACT+CGG 0.468600 4_4:+45355617 None:intergenic
GGAATTAGAAGGAGATGAAG+AGG 0.472885 4_4:-45357707 Msa0683010:CDS
TTCTTAGGAAGTGAAGTAAG+AGG 0.473214 4_4:+45358919 None:intergenic
GTGACATACAACAGGTAAGA+TGG 0.476656 4_4:-45355669 Msa0683010:intron
ATCACTGGTATGAATCCTAA+TGG 0.476712 4_4:-45355499 Msa0683010:intron
CTAAAGTTTCAGGGTTGTGT+TGG 0.478705 4_4:-45352384 Msa0683010:exon
GGCATCTGCTCACAACTGGC+TGG 0.479273 4_4:-45356985 Msa0683010:CDS
ATCAAGAATCCAGTGAGTAT+AGG 0.479733 4_4:-45356109 Msa0683010:CDS
TGTAGTAGTGGTATGTTGAT+TGG 0.485540 4_4:-45355951 Msa0683010:CDS
AAACATGCAGATTGAAAACT+AGG 0.485809 4_4:+45353682 None:intergenic
GAAACCGCGGACCGGTCTAC+TGG 0.486331 4_4:-45355542 Msa0683010:CDS
TGGAAAGTAACAACTTTCCA+AGG 0.487409 4_4:-45353786 Msa0683010:CDS
AAATTTCGCCATATTTATAG+AGG 0.488170 4_4:-45357102 Msa0683010:intron
TCTTGACCTTGCAAGACCCT+TGG 0.488979 4_4:+45353769 None:intergenic
TTTCTTGAGAGAGTCTCAAA+TGG 0.494706 4_4:+45359139 None:intergenic
GCTTTGTCAATATCTCTGTA+AGG 0.495987 4_4:+45353658 None:intergenic
CCTTCAAAGTCTTCCTCAGT+TGG 0.496667 4_4:-45352440 Msa0683010:CDS
CATACCAGTGATGAGGTGAT+TGG 0.496922 4_4:+45355510 None:intergenic
GAAGAATGCATTGTGCCATA+AGG 0.497724 4_4:-45359064 Msa0683010:CDS
TGAATGTGTTTGGTTTGGGG+TGG 0.498907 4_4:-45352103 Msa0683010:three_prime_UTR
GTCTCTGATACCAGCACTCA+TGG 0.499971 4_4:-45357628 Msa0683010:CDS
AGAGCTGTTAGACCTAGAAA+TGG 0.501621 4_4:-45356427 Msa0683010:CDS
TGCAGATTGAAAACTAGGCT+TGG 0.506257 4_4:+45353687 None:intergenic
GAAAATGGAGAGCTGAGATT+GGG 0.510036 4_4:-45356457 Msa0683010:CDS
AACACACCATCGATAGTGGC+AGG 0.510410 4_4:-45353574 Msa0683010:CDS
CACTAAATAAGTGCTAGTCT+TGG 0.513447 4_4:-45352236 Msa0683010:three_prime_UTR
TATATATACCAAAGAAGAAG+TGG 0.514232 4_4:-45352537 Msa0683010:CDS
CCGCGGTTTCTTCAGTCTTG+GGG 0.515903 4_4:+45355555 None:intergenic
GGGAACATTAGAAAAGAAGT+TGG 0.522575 4_4:-45353553 Msa0683010:CDS
GTTTAACACACCATCGATAG+TGG 0.526144 4_4:-45353578 Msa0683010:CDS
ATTCAGTACTCACAAGTAGC+TGG 0.528164 4_4:+45358770 None:intergenic
TACTCTGCTACCTCAGGCTG+AGG 0.529145 4_4:-45358460 Msa0683010:intron
GAATTAGAAGGAGATGAAGA+GGG 0.531417 4_4:-45357706 Msa0683010:CDS
TCCAAATGAGCATAAGCTCC+AGG 0.532461 4_4:-45353509 Msa0683010:CDS
GTTGTGAGCAGATGCCGCCT+TGG 0.534028 4_4:+45356992 None:intergenic
ACAGCTATGAGTATCATCAT+TGG 0.534267 4_4:+45352490 None:intergenic
TGAGAATGACATAATGGTTG+TGG 0.539248 4_4:-45353077 Msa0683010:CDS
TCCAAATGATAACAATGTCA+AGG 0.539957 4_4:-45353440 Msa0683010:CDS
GCTGAGCTAACTAGCCAAAA+GGG 0.542189 4_4:+45352301 None:intergenic
TGGATGAATCACCAGAAAGA+AGG 0.543057 4_4:-45356060 Msa0683010:intron
TGAATGCTTAGGGGAGGCTG+AGG 0.543172 4_4:+45355583 None:intergenic
TCACCCAATCACCTCATCAC+TGG 0.544643 4_4:-45355514 Msa0683010:CDS
GGAGAATCCACCATGAGTGC+TGG 0.545318 4_4:+45357618 None:intergenic
TTGGAGATTCTGATAAGGGA+TGG 0.545399 4_4:-45353120 Msa0683010:CDS
GCAGGAATCAGTGGAATGAT+GGG 0.546322 4_4:-45355224 Msa0683010:CDS
ACATTTAAAATATTGTAAGG+TGG 0.547098 4_4:-45352042 Msa0683010:three_prime_UTR
TTCTGCTTCTGCTTCATTAG+GGG 0.547616 4_4:-45353479 Msa0683010:CDS
GAAGAGCCATTGATCTCTCT+AGG 0.548597 4_4:-45353204 Msa0683010:CDS
TTATGAATGTGTTTGGTTTG+GGG 0.550292 4_4:-45352106 Msa0683010:three_prime_UTR
CAGAAGCAGAAACATTGTCC+TGG 0.550901 4_4:+45353491 None:intergenic
TTTGGCAACAAGCTCTTGAG+AGG 0.551407 4_4:+45357146 None:intergenic
TAAGTGCTAGTCTTGGAAGT+TGG 0.551675 4_4:-45352229 Msa0683010:three_prime_UTR
GGAGCTTATGCTCATTTGGA+AGG 0.553078 4_4:+45353512 None:intergenic
TCTAAACAATGAAGTGATTG+AGG 0.553452 4_4:-45359091 Msa0683010:CDS
TGACAGTGAGAATGACATAA+TGG 0.554268 4_4:-45353083 Msa0683010:CDS
AAGAAGAATACTTACTGCCA+TGG 0.559448 4_4:+45353046 None:intergenic
AATTGTTCTAAATGACCTTG+TGG 0.560241 4_4:+45358874 None:intergenic
GGAAAAGCTGATTTCAACAT+CGG 0.565551 4_4:-45353721 Msa0683010:CDS
TGACATACAACAGGTAAGAT+GGG 0.566150 4_4:-45355668 Msa0683010:intron
GAGAATGACATAATGGTTGT+GGG 0.567615 4_4:-45353076 Msa0683010:CDS
CTATCTTGTAGGTGTAGTAG+TGG 0.570573 4_4:-45355963 Msa0683010:intron
ATACCAGTGATGAGGTGATT+GGG 0.571375 4_4:+45355511 None:intergenic
ATGTTCCCTGCCACTATCGA+TGG 0.572030 4_4:+45353568 None:intergenic
ACAAGTTACTCTGCTACCTC+AGG 0.572482 4_4:-45358466 Msa0683010:CDS
GAGATGAAGAGGGAGATGGA+GGG 0.575170 4_4:-45357696 Msa0683010:CDS
ATAGGAAGCACAGAAACAAA+AGG 0.575186 4_4:+45359476 None:intergenic
TAGCATTTGCAACAGATGAA+AGG 0.577301 4_4:+45356359 None:intergenic
ATAAAGCCTGCATAACTGAA+AGG 0.578447 4_4:+45353808 None:intergenic
CCAAATGATAACAATGTCAA+GGG 0.578863 4_4:-45353439 Msa0683010:CDS
GATTTCAACATCGGAGCTTG+GGG 0.582139 4_4:-45353712 Msa0683010:CDS
CAAATGAAGGTTCACAAGCA+AGG 0.586098 4_4:-45353238 Msa0683010:intron
GGAATTTGGTAAATGCACTC+TGG 0.586195 4_4:-45352020 Msa0683010:three_prime_UTR
TTCAGCAGCTCTACGAGGCA+CGG 0.586620 4_4:+45357597 None:intergenic
TTTATGGCAGCAGGAATCAG+TGG 0.590392 4_4:-45355233 Msa0683010:intron
TACACTTTATAGAATCCACT+TGG 0.590961 4_4:-45359225 Msa0683010:five_prime_UTR
ATCAAGACCGAGTATCGCCA+TGG 0.592676 4_4:-45355624 Msa0683010:CDS
CATTCTCACTGTCAGTGTAG+AGG 0.593368 4_4:+45353092 None:intergenic
CCAAAAGTCACAACCCACAT+TGG 0.594115 4_4:-45359508 None:intergenic
TGTGTACTCTAGAATTATGG+TGG 0.595811 4_4:-45352172 Msa0683010:three_prime_UTR
ATTTCCACTCCACACCATGC+AGG 0.596067 4_4:+45357121 None:intergenic
AACTTTCCAAGGGTCTTGCA+AGG 0.597137 4_4:-45353775 Msa0683010:CDS
TATGGAAGGAAAAGAAGTTG+AGG 0.598443 4_4:-45357728 Msa0683010:CDS
ACTGGAGAAACTATTTGGCA+TGG 0.598525 4_4:-45353152 Msa0683010:CDS
AGACTGAAGAAACCGCGGAC+CGG 0.598571 4_4:-45355550 Msa0683010:CDS
GAGAAACTATTTGGCATGGA+AGG 0.600086 4_4:-45353148 Msa0683010:CDS
TTCAAGTCATCATCAAAACC+TGG 0.600469 4_4:-45353884 Msa0683010:CDS
GGGTGAGGTAACCAGTAGAC+CGG 0.601618 4_4:+45355531 None:intergenic
TCTTAGGAAGTGAAGTAAGA+GGG 0.602953 4_4:+45358920 None:intergenic
CTAATTTGTCAGGTCAGCCA+AGG 0.606026 4_4:-45357009 Msa0683010:intron
GTGTCTTGCAGAACATGTGA+GGG 0.607798 4_4:+45357656 None:intergenic
GAAGAAAGATCGATCTCCCA+TGG 0.608121 4_4:+45355607 None:intergenic
CTACTAGGTTCGCCAGACAA+AGG 0.611679 4_4:+45353385 None:intergenic
ACAACAGGTAAGATGGGATG+AGG 0.612245 4_4:-45355662 Msa0683010:intron
ATTTGTAGGTACATAGAAGA+GGG 0.613006 4_4:+45359431 None:intergenic
GAAGTGCTCAACTCAAAACC+TGG 0.615230 4_4:+45353904 None:intergenic
AGTGTCTTGCAGAACATGTG+AGG 0.616842 4_4:+45357655 None:intergenic
GGAAAGTAACAACTTTCCAA+GGG 0.618100 4_4:-45353785 Msa0683010:CDS
GAAGACAGAGACAATTGCAT+AGG 0.621616 4_4:+45359458 None:intergenic
AAAGGCAAGTAAAGCCAATG+TGG 0.622004 4_4:+45359494 None:intergenic
ATAATCTGGCTGACCAACTG+AGG 0.623428 4_4:+45352427 None:intergenic
CATTTGTAGGTACATAGAAG+AGG 0.624421 4_4:+45359430 None:intergenic
TCAGCCACAGATCTTCTGCA+GGG 0.624471 4_4:-45358803 Msa0683010:CDS
GCTCAACCTAGAGAGATCAA+TGG 0.626281 4_4:+45353198 None:intergenic
GAGATTCTGATAAGGGATGG+AGG 0.629184 4_4:-45353117 Msa0683010:CDS
AAGACCTGCATGGTGTGGAG+TGG 0.629896 4_4:-45357125 Msa0683010:CDS
TTTCATATTTCATGTCATGG+TGG 0.631774 4_4:-45352148 Msa0683010:three_prime_UTR
TGCCAAAGACCTGCATGGTG+TGG 0.632330 4_4:-45357130 Msa0683010:CDS
TTGGCAACAAGCTCTTGAGA+GGG 0.634142 4_4:+45357147 None:intergenic
AGTGATGAGGTGATTGGGTG+AGG 0.637047 4_4:+45355516 None:intergenic
GGGGAAGACTGAATGCTTAG+GGG 0.643082 4_4:+45355574 None:intergenic
ACAACCCTGCAGAAGATCTG+TGG 0.645229 4_4:+45358799 None:intergenic
TTGGCAGGGATGCATATGGA+AGG 0.645626 4_4:-45357742 Msa0683010:CDS
TCCTAAGAAAGGAAATGTTG+TGG 0.646376 4_4:-45358905 Msa0683010:CDS
TAGGATTCATACCAGTGATG+AGG 0.646397 4_4:+45355503 None:intergenic
ATCCAGTGAGTATAGGGACA+AGG 0.648334 4_4:-45356102 Msa0683010:CDS
AGATAAGAAGAAGAAACAAG+TGG 0.649698 4_4:+45358967 None:intergenic
AAGGCAAGTAAAGCCAATGT+GGG 0.652062 4_4:+45359495 None:intergenic
ATTGATCTCTCTAGGTTGAG+CGG 0.652349 4_4:-45353196 Msa0683010:CDS
GATGGCCTAAATCAAAATGG+AGG 0.658795 4_4:-45355905 Msa0683010:CDS
GGAGTCAGTAAGATCACCAA+AGG 0.663614 4_4:-45355195 Msa0683010:intron
TCAAGACCGAGTATCGCCAT+GGG 0.667440 4_4:-45355623 Msa0683010:CDS
ACACACCATCGATAGTGGCA+GGG 0.674307 4_4:-45353573 Msa0683010:CDS
GAAGACTGAATGCTTAGGGG+AGG 0.675841 4_4:+45355577 None:intergenic
GAATGACATAATGGTTGTGG+GGG 0.679524 4_4:-45353074 Msa0683010:CDS
AGAATGACATAATGGTTGTG+GGG 0.682622 4_4:-45353075 Msa0683010:CDS
TCTGATACCAGCACTCATGG+TGG 0.683675 4_4:-45357625 Msa0683010:CDS
ATTTGTCAGGTCAGCCAAGG+CGG 0.683923 4_4:-45357006 Msa0683010:intron
GGCCAACAAGGAGAATGATG+AGG 0.688468 4_4:-45358496 Msa0683010:CDS
CCCCAAGACTGAAGAAACCG+CGG 0.689701 4_4:-45355555 Msa0683010:CDS
CAATCTTCAGCAGCTCTACG+AGG 0.704658 4_4:+45357592 None:intergenic
CTTGTTGCCAAAGACCTGCA+TGG 0.711328 4_4:-45357135 Msa0683010:CDS
ATTAACACTCATAAGCTCAG+AGG 0.715454 4_4:+45353831 None:intergenic
GTAACCAGTAGACCGGTCCG+CGG 0.729539 4_4:+45355538 None:intergenic
TGTCTTGCAGAACATGTGAG+GGG 0.734062 4_4:+45357657 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTAAAGATAGAAAAAA+GGG + chr4_4:45352304-45352323 None:intergenic 10.0%
!! TTTATTTAAAGATAGAAAAA+AGG + chr4_4:45352305-45352324 None:intergenic 10.0%
!! ATATAAATCAATAAAATCAT+TGG - chr4_4:45355301-45355320 Msa0683010:intron 10.0%
!!! AAATATTTTTAATGATGAAA+CGG - chr4_4:45355786-45355805 Msa0683010:intron 10.0%
!!! TTTTCAAAAGAAAAAATAAT+GGG - chr4_4:45356454-45356473 Msa0683010:CDS 10.0%
!!! ATATAATTACACTGAATTTT+GGG - chr4_4:45352861-45352880 Msa0683010:intron 15.0%
!!! AAATTATTGTTTCTTTTAAC+AGG - chr4_4:45352981-45353000 Msa0683010:intron 15.0%
!!! TTTTTTATGTTCTTTATGTT+TGG - chr4_4:45353074-45353093 Msa0683010:CDS 15.0%
!!! CAAAGAAAAAATAACTTTTT+AGG - chr4_4:45353237-45353256 Msa0683010:intron 15.0%
!! CTTTGAATAATTTATGTATT+TGG - chr4_4:45353262-45353281 Msa0683010:intron 15.0%
!! AAATTTGTATGTCAAAATAA+CGG - chr4_4:45353557-45353576 Msa0683010:CDS 15.0%
!!! GTTTTCAAAAGAAAAAATAA+TGG - chr4_4:45356453-45356472 Msa0683010:CDS 15.0%
!!! TGTCCAAATAAATTTTATTT+AGG - chr4_4:45356620-45356639 Msa0683010:intron 15.0%
!!! GTCCAAATAAATTTTATTTA+GGG - chr4_4:45356621-45356640 Msa0683010:intron 15.0%
!! AACCCTAAATAAAATTTATT+TGG + chr4_4:45356626-45356645 None:intergenic 15.0%
!!! TTTATTTTTCACGAAAATTA+AGG + chr4_4:45356929-45356948 None:intergenic 15.0%
!! TATATAATATACACAAATGA+AGG - chr4_4:45358247-45358266 Msa0683010:intron 15.0%
!!! AATATTTTTATGAATGTGTT+TGG - chr4_4:45359385-45359404 Msa0683010:five_prime_UTR 15.0%
!! TAAAGATAAGAAAAAAAGGA+AGG + chr4_4:45352167-45352186 None:intergenic 20.0%
!!! TTTTTTTCATATTGCAAACA+AGG + chr4_4:45352192-45352211 None:intergenic 20.0%
!! AAGTGTAATTCAAAAAGTTA+AGG + chr4_4:45352260-45352279 None:intergenic 20.0%
!!! CATATAATTACACTGAATTT+TGG - chr4_4:45352860-45352879 Msa0683010:intron 20.0%
!!! GGATTTTTTCAAATTTTTAG+CGG - chr4_4:45352882-45352901 Msa0683010:intron 20.0%
!!! TGAATTCATGTAACATATTT+TGG - chr4_4:45352950-45352969 Msa0683010:intron 20.0%
!! CAATAGTAAATAAACATGTT+TGG + chr4_4:45353109-45353128 None:intergenic 20.0%
!! ATCCTATAGTAAAAAGTAAA+AGG + chr4_4:45354316-45354335 None:intergenic 20.0%
!! TTACATTACCTCTATAAATA+TGG + chr4_4:45354407-45354426 None:intergenic 20.0%
!! AATCGATACACAAAATAATA+TGG - chr4_4:45354464-45354483 Msa0683010:intron 20.0%
!! ATCTGAGTAATGAATATTTA+TGG - chr4_4:45354740-45354759 Msa0683010:intron 20.0%
!! AGTAATGAATATTTATGGTT+CGG - chr4_4:45354745-45354764 Msa0683010:intron 20.0%
!!! TTTATCCTTAGATTTTGTTT+TGG - chr4_4:45355270-45355289 Msa0683010:intron 20.0%
!!! CTTTTAACATATTTTTGGTA+CGG + chr4_4:45355368-45355387 None:intergenic 20.0%
!!! TGATGCTTTTAACATATTTT+TGG + chr4_4:45355373-45355392 None:intergenic 20.0%
!! TATAAATGATGAGTTATGAT+TGG + chr4_4:45355737-45355756 None:intergenic 20.0%
!!! CATCATTTATATGACTTTTA+AGG - chr4_4:45355746-45355765 Msa0683010:intron 20.0%
!! AATAGATTGAATGTATTCTT+AGG - chr4_4:45356103-45356122 Msa0683010:CDS 20.0%
!!! AGACTGTGTTTATAAATTTT+GGG + chr4_4:45356215-45356234 None:intergenic 20.0%
!!! AAGACTGTGTTTATAAATTT+TGG + chr4_4:45356216-45356235 None:intergenic 20.0%
!! AACAAAGAAAGAATATGATT+AGG + chr4_4:45356242-45356261 None:intergenic 20.0%
!!! TTCTTTCTTTGTTTCATTTA+TGG - chr4_4:45356249-45356268 Msa0683010:intron 20.0%
!!! GTCTAAATACTTTTGATTTA+GGG + chr4_4:45356513-45356532 None:intergenic 20.0%
!!! TGTCTAAATACTTTTGATTT+AGG + chr4_4:45356514-45356533 None:intergenic 20.0%
!! TCAGAATTCAATAGATATAT+AGG - chr4_4:45356715-45356734 Msa0683010:intron 20.0%
!!! TTTTTTCTGATTTCTTTTTC+AGG + chr4_4:45356826-45356845 None:intergenic 20.0%
!!! ATTTTATTCATTAGAGTCAT+CGG + chr4_4:45357052-45357071 None:intergenic 20.0%
!! AATTATTACATTACCACTAT+TGG - chr4_4:45357084-45357103 Msa0683010:intron 20.0%
!!! AAAAGTTCTATTATGTTTTC+TGG + chr4_4:45357261-45357280 None:intergenic 20.0%
!!! TCACTTTTTTATTGTATGTT+TGG - chr4_4:45358570-45358589 Msa0683010:intron 20.0%
!!! TATAATTTGATGTTGCATTT+TGG - chr4_4:45359168-45359187 Msa0683010:five_prime_UTR 20.0%
!! TTTAGAAAAAATGAAAGTAG+AGG - chr4_4:45359432-45359451 Msa0683010:five_prime_UTR 20.0%
!!! GGAACATTTAAAATATTGTA+AGG - chr4_4:45359453-45359472 Msa0683010:five_prime_UTR 20.0%
!!! ACATTTAAAATATTGTAAGG+TGG - chr4_4:45359456-45359475 Msa0683010:five_prime_UTR 20.0%
!!! CATTTAAAATATTGTAAGGT+GGG - chr4_4:45359457-45359476 Msa0683010:five_prime_UTR 20.0%
! GGCTTAAAGATAAGAAAAAA+AGG + chr4_4:45352171-45352190 None:intergenic 25.0%
! GTATAGTATCATGAAAAATG+AGG + chr4_4:45352232-45352251 None:intergenic 25.0%
! AATTCAAAAAGTTAAGGCTA+TGG + chr4_4:45352254-45352273 None:intergenic 25.0%
!!! GTTTGATCATTTTTCAATTG+TGG - chr4_4:45352325-45352344 Msa0683010:three_prime_UTR 25.0%
!! TTTCTCTCCTTTTAAACAAT+TGG - chr4_4:45352653-45352672 Msa0683010:intron 25.0%
! TTCAGTGTAATTATATGTGT+CGG + chr4_4:45352857-45352876 None:intergenic 25.0%
! TCAAATTGTGTGTCAAAATA+TGG + chr4_4:45353147-45353166 None:intergenic 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG - chr4_4:45353336-45353355 Msa0683010:intron 25.0%
! GATGGTTAATGAATATAACA+AGG + chr4_4:45353470-45353489 None:intergenic 25.0%
! AAATTCGAAAACAACTTAGA+TGG + chr4_4:45353530-45353549 None:intergenic 25.0%
!! GTATTTGAAGTTACTCAAAA+GGG + chr4_4:45353714-45353733 None:intergenic 25.0%
!! ACTGAAAGATTTTATACCAA+TGG + chr4_4:45353939-45353958 None:intergenic 25.0%
! CAGAAATAATCAAACTTTAG+CGG + chr4_4:45354003-45354022 None:intergenic 25.0%
!!! AAAGTTTGATTATTTCTGTC+TGG - chr4_4:45354005-45354024 Msa0683010:intron 25.0%
!! TTTTCATGTAAGCTATAAGA+TGG + chr4_4:45354166-45354185 None:intergenic 25.0%
! GCTTATCATATAAGTGTTTA+CGG + chr4_4:45354231-45354250 None:intergenic 25.0%
!! TTAAGTTGTTTATCCAAACA+AGG - chr4_4:45354259-45354278 Msa0683010:intron 25.0%
!!! CTCCTTTTACTTTTTACTAT+AGG - chr4_4:45354311-45354330 Msa0683010:intron 25.0%
! AAATTTCGCCATATTTATAG+AGG - chr4_4:45354396-45354415 Msa0683010:intron 25.0%
!! TAATATGGTACTAATTTGTC+AGG - chr4_4:45354479-45354498 Msa0683010:intron 25.0%
! TATAGTCAAATTTCAAAAGC+AGG - chr4_4:45354875-45354894 Msa0683010:intron 25.0%
! TGATTTGAAAGATACTAGAA+TGG + chr4_4:45354990-45355009 None:intergenic 25.0%
! GTTCAAAATGAGAATTGAAA+TGG - chr4_4:45355418-45355437 Msa0683010:intron 25.0%
!! ATTTTACATTACCTTCTTTC+TGG + chr4_4:45355452-45355471 None:intergenic 25.0%
! GTTGATTGGAATAAATGATT+TGG - chr4_4:45355561-45355580 Msa0683010:CDS 25.0%
!! GACTGTGTTTATAAATTTTG+GGG + chr4_4:45356214-45356233 None:intergenic 25.0%
! TCCATAGAGACAAATTAAAA+CGG - chr4_4:45356665-45356684 Msa0683010:intron 25.0%
!! CTAAAAAGCTTGTTTCATTA+TGG + chr4_4:45356797-45356816 None:intergenic 25.0%
! AAAGAAATCAGAAAAAACCA+CGG - chr4_4:45356829-45356848 Msa0683010:intron 25.0%
! ATGAATCAACTTTGCAATTA+TGG - chr4_4:45356964-45356983 Msa0683010:CDS 25.0%
! AGAATAAAGTTATCCAATAG+TGG + chr4_4:45357100-45357119 None:intergenic 25.0%
! TATCACATAATACTTCTTTG+AGG + chr4_4:45357149-45357168 None:intergenic 25.0%
!!! TTCTGTAAATTTTGACTACT+AGG + chr4_4:45358131-45358150 None:intergenic 25.0%
! ATTTACAGAACACTTCAAAA+AGG - chr4_4:45358141-45358160 Msa0683010:intron 25.0%
!! CCAACTCATTTTATAACAAA+AGG + chr4_4:45358740-45358759 None:intergenic 25.0%
!!! CCTTTTGTTATAAAATGAGT+TGG - chr4_4:45358737-45358756 Msa0683010:intron 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG - chr4_4:45354258-45354277 Msa0683010:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG - chr4_4:45354259-45354278 Msa0683010:intron 25.0%
!!! AGTTTCTAGTGTTTTGTTTT+TGG - chr4_4:45358902-45358921 Msa0683010:CDS 25.0%
! CTTCTTCTTTGGTATATATA+TGG + chr4_4:45358961-45358980 None:intergenic 25.0%
! TATATATACCAAAGAAGAAG+TGG - chr4_4:45358961-45358980 Msa0683010:CDS 25.0%
! TTTGAAGGTTCAATAATAAC+TGG + chr4_4:45359046-45359065 None:intergenic 25.0%
!!! AATTGTGTACTCTAGAATTA+TGG - chr4_4:45359323-45359342 Msa0683010:five_prime_UTR 25.0%
!! TTTTATGAATGTGTTTGGTT+TGG - chr4_4:45359390-45359409 Msa0683010:five_prime_UTR 25.0%
!! TTTATGAATGTGTTTGGTTT+GGG - chr4_4:45359391-45359410 Msa0683010:five_prime_UTR 25.0%
ATTTGTAGGTACATAGAAGA+GGG + chr4_4:45352070-45352089 None:intergenic 30.0%
ATTCCATTATCTCCATTTGT+AGG + chr4_4:45352084-45352103 None:intergenic 30.0%
TACACTTTATAGAATCCACT+TGG - chr4_4:45352273-45352292 Msa0683010:three_prime_UTR 30.0%
TCTAAACAATGAAGTGATTG+AGG - chr4_4:45352407-45352426 Msa0683010:CDS 30.0%
!! AACCTTTTTCACATTCCTTA+TGG + chr4_4:45352452-45352471 None:intergenic 30.0%
AGATAAGAAGAAGAAACAAG+TGG + chr4_4:45352534-45352553 None:intergenic 30.0%
CTTCTTCTTATCTTGAACTA+TGG - chr4_4:45352541-45352560 Msa0683010:CDS 30.0%
! AATTGTTCTAAATGACCTTG+TGG + chr4_4:45352627-45352646 None:intergenic 30.0%
GGTATCTCCAATTGTTTAAA+AGG + chr4_4:45352663-45352682 None:intergenic 30.0%
!!! TTTCAAATTTTTAGCGGTGT+CGG - chr4_4:45352888-45352907 Msa0683010:intron 30.0%
GATTAACTACTTTCAGTAGA+TGG - chr4_4:45353181-45353200 Msa0683010:CDS 30.0%
TGAAGTTCAAAATCCTAGTT+AGG - chr4_4:45353412-45353431 Msa0683010:CDS 30.0%
GATTAACTACATTCAACTGA+TGG + chr4_4:45353488-45353507 None:intergenic 30.0%
GAGATGTGAAAGTTAATGAA+TGG - chr4_4:45353642-45353661 Msa0683010:CDS 30.0%
TTAATGAATGGAGTGATGAA+GGG - chr4_4:45353654-45353673 Msa0683010:CDS 30.0%
! CGTATTTGAAGTTACTCAAA+AGG + chr4_4:45353715-45353734 None:intergenic 30.0%
TTTGAGTAACTTCAAATACG+TGG - chr4_4:45353715-45353734 Msa0683010:CDS 30.0%
AAAGAAGTTGAGGAATTAGA+AGG - chr4_4:45353780-45353799 Msa0683010:CDS 30.0%
! GAAAGATTTTATACCAATGG+AGG + chr4_4:45353936-45353955 None:intergenic 30.0%
! GTGATGAACATATTCTAGTT+TGG - chr4_4:45353957-45353976 Msa0683010:intron 30.0%
!! TAAAGTCTCCCTTTAATTTG+TGG - chr4_4:45354284-45354303 Msa0683010:intron 30.0%
! AACCAAAAGAATCTTGTTTC+TGG - chr4_4:45354548-45354567 Msa0683010:intron 30.0%
AAGTATGTTCTTTCCTAGTT+TGG + chr4_4:45354813-45354832 None:intergenic 30.0%
TAATAATCTTTGAATGCCGA+TGG - chr4_4:45354910-45354929 Msa0683010:intron 30.0%
AATCTCAAGTTTGATTCCAT+CGG + chr4_4:45354929-45354948 None:intergenic 30.0%
TCTTTCTTTGACAGTATAGT+TGG + chr4_4:45354952-45354971 None:intergenic 30.0%
CTGTTATGAATGACTTTGTA+GGG - chr4_4:45355016-45355035 Msa0683010:intron 30.0%
TGTTATGAATGACTTTGTAG+GGG - chr4_4:45355017-45355036 Msa0683010:intron 30.0%
! TGATTACCAACAATTGATTC+AGG + chr4_4:45355101-45355120 None:intergenic 30.0%
! GAAAACATGAAACATGCTTT+TGG + chr4_4:45355171-45355190 None:intergenic 30.0%
! TTCATGTTTTCTATAGTCCA+AGG - chr4_4:45355180-45355199 Msa0683010:intron 30.0%
CACAACCAAAACAAAATCTA+AGG + chr4_4:45355278-45355297 None:intergenic 30.0%
!!! CTTAGATTTTGTTTTGGTTG+TGG - chr4_4:45355276-45355295 Msa0683010:intron 30.0%
!! ATGTCAAGAAACTGTTTTGA+AGG + chr4_4:45355503-45355522 None:intergenic 30.0%
ATATTGTCTTCCTATCTTGT+AGG - chr4_4:45355524-45355543 Msa0683010:CDS 30.0%
! TTTGATTTAGGCCATCTATA+GGG + chr4_4:45355589-45355608 None:intergenic 30.0%
!!! TTTTGATTTAGGCCATCTAT+AGG + chr4_4:45355590-45355609 None:intergenic 30.0%
ATAGATGGCCTAAATCAAAA+TGG - chr4_4:45355590-45355609 Msa0683010:CDS 30.0%
!!! ACCGTTTTAATTTGTCTCTA+TGG + chr4_4:45356669-45356688 None:intergenic 30.0%
CTATTGAATTCTGAACATAG+AGG + chr4_4:45356709-45356728 None:intergenic 30.0%
AAGAAATCAGAAAAAACCAC+GGG - chr4_4:45356830-45356849 Msa0683010:intron 30.0%
ATGTTTCTTTCACTCATCTT+GGG + chr4_4:45356906-45356925 None:intergenic 30.0%
GACAATGCATAAAATATGCA+AGG - chr4_4:45357385-45357404 Msa0683010:intron 30.0%
!! GGTTTTATGTCACTATACTA+TGG - chr4_4:45357549-45357568 Msa0683010:intron 30.0%
AAACATGCAGATTGAAAACT+AGG + chr4_4:45357819-45357838 None:intergenic 30.0%
GACATTATCACTCATGAAAT+TGG + chr4_4:45357898-45357917 None:intergenic 30.0%
TCCAAATGATAACAATGTCA+AGG - chr4_4:45358058-45358077 Msa0683010:intron 30.0%
CCAAATGATAACAATGTCAA+GGG - chr4_4:45358059-45358078 Msa0683010:intron 30.0%
GCAGTAAGTATTCTTCTTTA+TGG - chr4_4:45358457-45358476 Msa0683010:intron 30.0%
! ACTGTTTTCATAAGCTATCA+TGG + chr4_4:45358689-45358708 None:intergenic 30.0%
!!! GGTTGGTTTTGTTATAGAAA+TGG - chr4_4:45358831-45358850 Msa0683010:CDS 30.0%
AGAAACTTAAATACCCTGTT+TGG + chr4_4:45358889-45358908 None:intergenic 30.0%
! TAGTTAGAGTCTAAAGTTTC+AGG - chr4_4:45359104-45359123 Msa0683010:CDS 30.0%
! AGTTAGAGTCTAAAGTTTCA+GGG - chr4_4:45359105-45359124 Msa0683010:CDS 30.0%
CAGTTAATTGTCAATCTTTC+TGG + chr4_4:45359242-45359261 None:intergenic 30.0%
ACACAATTCTCAAGAGATAT+TGG + chr4_4:45359311-45359330 None:intergenic 30.0%
! GGTTTTCATATTTCATGTCA+TGG - chr4_4:45359347-45359366 Msa0683010:five_prime_UTR 30.0%
TTTCATATTTCATGTCATGG+TGG - chr4_4:45359350-45359369 Msa0683010:five_prime_UTR 30.0%
!! TTATGAATGTGTTTGGTTTG+GGG - chr4_4:45359392-45359411 Msa0683010:five_prime_UTR 30.0%
AATATTGTAAGGTGGGAATT+TGG - chr4_4:45359464-45359483 Msa0683010:five_prime_UTR 30.0%
! ATAGGAAGCACAGAAACAAA+AGG + chr4_4:45352025-45352044 None:intergenic 35.0%
CATTTGTAGGTACATAGAAG+AGG + chr4_4:45352071-45352090 None:intergenic 35.0%
CTCTTCTATGTACCTACAAA+TGG - chr4_4:45352069-45352088 Msa0683010:three_prime_UTR 35.0%
GTACCTACAAATGGAGATAA+TGG - chr4_4:45352078-45352097 Msa0683010:three_prime_UTR 35.0%
TTTCTTGAGAGAGTCTCAAA+TGG + chr4_4:45352362-45352381 None:intergenic 35.0%
AGAAACAAAGACAGTGTTCA+TGG - chr4_4:45352377-45352396 Msa0683010:three_prime_UTR 35.0%
TGCCATAAGGAATGTGAAAA+AGG - chr4_4:45352447-45352466 Msa0683010:CDS 35.0%
! CTTGAAGATGAACAAGTTGA+AGG + chr4_4:45352501-45352520 None:intergenic 35.0%
TCTTAGGAAGTGAAGTAAGA+GGG + chr4_4:45352581-45352600 None:intergenic 35.0%
TTCTTAGGAAGTGAAGTAAG+AGG + chr4_4:45352582-45352601 None:intergenic 35.0%
CTTACTTCACTTCCTAAGAA+AGG - chr4_4:45352582-45352601 Msa0683010:intron 35.0%
TCCTAAGAAAGGAAATGTTG+TGG - chr4_4:45352593-45352612 Msa0683010:intron 35.0%
ACCACAACATTTCCTTTCTT+AGG + chr4_4:45352597-45352616 None:intergenic 35.0%
! TTCTCAGATTAGTTGTGTTC+CGG - chr4_4:45352799-45352818 Msa0683010:intron 35.0%
AGTAAACAACCTATGAAGCA+CGG + chr4_4:45352931-45352950 None:intergenic 35.0%
! TTTCTTTTAACAGGCCAACA+AGG - chr4_4:45352990-45353009 Msa0683010:intron 35.0%
ACTTCATTAACCACTGTTGA+GGG + chr4_4:45353398-45353417 None:intergenic 35.0%
AACTTCATTAACCACTGTTG+AGG + chr4_4:45353399-45353418 None:intergenic 35.0%
CTTTCACATCTCATCATTTC+AGG + chr4_4:45353634-45353653 None:intergenic 35.0%
GTTAATGAATGGAGTGATGA+AGG - chr4_4:45353653-45353672 Msa0683010:CDS 35.0%
!! GATTGTTTTCGCTTTTCAGT+TGG - chr4_4:45353737-45353756 Msa0683010:CDS 35.0%
TATGGAAGGAAAAGAAGTTG+AGG - chr4_4:45353770-45353789 Msa0683010:CDS 35.0%
GAATTAGAAGGAGATGAAGA+GGG - chr4_4:45353792-45353811 Msa0683010:CDS 35.0%
! TGAAGATTGTTTTCCTCCAT+TGG - chr4_4:45353920-45353939 Msa0683010:intron 35.0%
TGAGATAAGTAGTTGTGAGA+CGG - chr4_4:45354052-45354071 Msa0683010:intron 35.0%
GATGGTTTCATAAGCTATCA+TGG + chr4_4:45354148-45354167 None:intergenic 35.0%
GGAGCAATCCACAAATTAAA+GGG + chr4_4:45354295-45354314 None:intergenic 35.0%
AGGAGCAATCCACAAATTAA+AGG + chr4_4:45354296-45354315 None:intergenic 35.0%
! CACCAGAAACAAGATTCTTT+TGG + chr4_4:45354553-45354572 None:intergenic 35.0%
!! GGCACTTCTAGGATATAAAT+AGG + chr4_4:45354622-45354641 None:intergenic 35.0%
!! ATGGTTCGGTACTAATATCA+AGG - chr4_4:45354759-45354778 Msa0683010:intron 35.0%
TGAATATCACGTACCAAACT+AGG - chr4_4:45354797-45354816 Msa0683010:intron 35.0%
TTCTCATTCACAAGAAGTCA+TGG + chr4_4:45354842-45354861 None:intergenic 35.0%
GCTGTTATGAATGACTTTGT+AGG - chr4_4:45355015-45355034 Msa0683010:intron 35.0%
GCAACAGATGAAAGGAAATT+GGG + chr4_4:45355134-45355153 None:intergenic 35.0%
TGCAACAGATGAAAGGAAAT+TGG + chr4_4:45355135-45355154 None:intergenic 35.0%
TAGCATTTGCAACAGATGAA+AGG + chr4_4:45355142-45355161 None:intergenic 35.0%
! AACATGAAACATGCTTTTGG+TGG + chr4_4:45355168-45355187 None:intergenic 35.0%
GTTAGTTAGTACTCTTACCT+TGG + chr4_4:45355200-45355219 None:intergenic 35.0%
ATCAAGAATCCAGTGAGTAT+AGG - chr4_4:45355389-45355408 Msa0683010:intron 35.0%
TCAAGAATCCAGTGAGTATA+GGG - chr4_4:45355390-45355409 Msa0683010:intron 35.0%
!!! TGTTTTGAAGGAAGAAATCG+TGG + chr4_4:45355491-45355510 None:intergenic 35.0%
TGTAGTAGTGGTATGTTGAT+TGG - chr4_4:45355547-45355566 Msa0683010:CDS 35.0%
! ATGATTTGGATCCCTATAGA+TGG - chr4_4:45355575-45355594 Msa0683010:CDS 35.0%
!!! AAGCACCTCCATTTTGATTT+AGG + chr4_4:45355601-45355620 None:intergenic 35.0%
TGACATACAACAGGTAAGAT+GGG - chr4_4:45355830-45355849 Msa0683010:intron 35.0%
ATCACTGGTATGAATCCTAA+TGG - chr4_4:45355999-45356018 Msa0683010:intron 35.0%
TATGAATCCTAATGGTGAGA+TGG - chr4_4:45356007-45356026 Msa0683010:intron 35.0%
TGCTTAGTACTACATGTATC+AGG - chr4_4:45356042-45356061 Msa0683010:intron 35.0%
GCTTAGTACTACATGTATCA+GGG - chr4_4:45356043-45356062 Msa0683010:intron 35.0%
TACATGTATCAGGGTCTATT+TGG - chr4_4:45356052-45356071 Msa0683010:intron 35.0%
TTTGTTTCATTTATGGCAGC+AGG - chr4_4:45356256-45356275 Msa0683010:intron 35.0%
GATGTTTCTTTCACTCATCT+TGG + chr4_4:45356907-45356926 None:intergenic 35.0%
TTATTCATTAGAGTCATCGG+TGG + chr4_4:45357049-45357068 None:intergenic 35.0%
TGCATAAAATATGCAAGGTC+CGG - chr4_4:45357390-45357409 Msa0683010:intron 35.0%
TTCAAGTCATCATCAAAACC+TGG - chr4_4:45357614-45357633 Msa0683010:CDS 35.0%
ATTAACACTCATAAGCTCAG+AGG + chr4_4:45357670-45357689 None:intergenic 35.0%
GTTAATCCTTTCAGTTATGC+AGG - chr4_4:45357684-45357703 Msa0683010:CDS 35.0%
ATAAAGCCTGCATAACTGAA+AGG + chr4_4:45357693-45357712 None:intergenic 35.0%
TTTCAGTTATGCAGGCTTTA+TGG - chr4_4:45357692-45357711 Msa0683010:CDS 35.0%
TGGAAAGTAACAACTTTCCA+AGG - chr4_4:45357712-45357731 Msa0683010:CDS 35.0%
GGAAAGTAACAACTTTCCAA+GGG - chr4_4:45357713-45357732 Msa0683010:CDS 35.0%
TGTAAACTGAAATCCCTTTC+AGG - chr4_4:45357756-45357775 Msa0683010:intron 35.0%
! GAAATCAGCTTTTCCTGAAA+GGG + chr4_4:45357772-45357791 None:intergenic 35.0%
! TGAAATCAGCTTTTCCTGAA+AGG + chr4_4:45357773-45357792 None:intergenic 35.0%
! GGAAAAGCTGATTTCAACAT+CGG - chr4_4:45357777-45357796 Msa0683010:intron 35.0%
GCTTTGTCAATATCTCTGTA+AGG + chr4_4:45357843-45357862 None:intergenic 35.0%
ACTATCGATGGTGTGTTAAA+CGG + chr4_4:45357921-45357940 None:intergenic 35.0%
GGGAACATTAGAAAAGAAGT+TGG - chr4_4:45357945-45357964 Msa0683010:intron 35.0%
AGAAAAGAAGTTGGAAGATC+TGG - chr4_4:45357954-45357973 Msa0683010:intron 35.0%
TTTCTGCTTCTGCTTCATTA+GGG - chr4_4:45358018-45358037 Msa0683010:intron 35.0%
CCCTTGACATTGTTATCATT+TGG + chr4_4:45358062-45358081 None:intergenic 35.0%
GCAAATTCCTGCAAACTATT+CGG - chr4_4:45358086-45358105 Msa0683010:intron 35.0%
TTCAAAAAGGAGTTGCACAA+AGG - chr4_4:45358154-45358173 Msa0683010:intron 35.0%
AGTGAACTGGAGAAACTATT+TGG - chr4_4:45358341-45358360 Msa0683010:intron 35.0%
ACTTCTTGGAGATTCTGATA+AGG - chr4_4:45358373-45358392 Msa0683010:intron 35.0%
CTTCTTGGAGATTCTGATAA+GGG - chr4_4:45358374-45358393 Msa0683010:intron 35.0%
TGACAGTGAGAATGACATAA+TGG - chr4_4:45358415-45358434 Msa0683010:intron 35.0%
TGAGAATGACATAATGGTTG+TGG - chr4_4:45358421-45358440 Msa0683010:intron 35.0%
GAGAATGACATAATGGTTGT+GGG - chr4_4:45358422-45358441 Msa0683010:intron 35.0%
AGAATGACATAATGGTTGTG+GGG - chr4_4:45358423-45358442 Msa0683010:intron 35.0%
AAGAAGAATACTTACTGCCA+TGG + chr4_4:45358455-45358474 None:intergenic 35.0%
! TGTTATAAAATGAGTTGGCG+AGG - chr4_4:45358742-45358761 Msa0683010:intron 35.0%
! GTTATAAAATGAGTTGGCGA+GGG - chr4_4:45358743-45358762 Msa0683010:intron 35.0%
AAGTGGAGAAGATGACATTT+GGG - chr4_4:45358978-45358997 Msa0683010:CDS 35.0%
ACAGCTATGAGTATCATCAT+TGG + chr4_4:45359011-45359030 None:intergenic 35.0%
TGATGATACTCATAGCTGTT+TGG - chr4_4:45359012-45359031 Msa0683010:CDS 35.0%
ACTACTGTTGGAGAATAATC+TGG + chr4_4:45359088-45359107 None:intergenic 35.0%
CTTTAGACTCTAACTACTGT+TGG + chr4_4:45359100-45359119 None:intergenic 35.0%
!!! CATTTTGGTTACTACCCTTT+TGG - chr4_4:45359183-45359202 Msa0683010:five_prime_UTR 35.0%
TTAGCTCAGCAAAAATTGCA+TGG - chr4_4:45359210-45359229 Msa0683010:five_prime_UTR 35.0%
! CACTAAATAAGTGCTAGTCT+TGG - chr4_4:45359262-45359281 Msa0683010:five_prime_UTR 35.0%
!! TGTGTACTCTAGAATTATGG+TGG - chr4_4:45359326-45359345 Msa0683010:five_prime_UTR 35.0%
AAGGCAAGTAAAGCCAATGT+GGG + chr4_4:45352006-45352025 None:intergenic 40.0%
AAAGGCAAGTAAAGCCAATG+TGG + chr4_4:45352007-45352026 None:intergenic 40.0%
GAAGACAGAGACAATTGCAT+AGG + chr4_4:45352043-45352062 None:intergenic 40.0%
GAAGAATGCATTGTGCCATA+AGG - chr4_4:45352434-45352453 Msa0683010:CDS 40.0%
! GTTGTGGTGTATTTTCCACA+AGG - chr4_4:45352609-45352628 Msa0683010:intron 40.0%
TGTGGCTGAAGATCATAGTT+TGG + chr4_4:45352684-45352703 None:intergenic 40.0%
ATTCAGTACTCACAAGTAGC+TGG + chr4_4:45352731-45352750 None:intergenic 40.0%
!! GAGAAGTGTTTGTGCTTCAT+AGG + chr4_4:45352784-45352803 None:intergenic 40.0%
AACCTCATCATTCTCCTTGT+TGG + chr4_4:45353007-45353026 None:intergenic 40.0%
TGGTTAATGAATACTCCCTG+CGG - chr4_4:45353201-45353220 Msa0683010:CDS 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr4_4:45353339-45353358 Msa0683010:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG - chr4_4:45353340-45353359 Msa0683010:intron 40.0%
ATTAACCATTCCCTCAACAG+TGG - chr4_4:45353385-45353404 Msa0683010:CDS 40.0%
ATTAACCACTGTTGAGGGAA+TGG + chr4_4:45353393-45353412 None:intergenic 40.0%
!! TTTTCGCTTTTCAGTTGGCA+GGG - chr4_4:45353742-45353761 Msa0683010:CDS 40.0%
GGAATTAGAAGGAGATGAAG+AGG - chr4_4:45353791-45353810 Msa0683010:CDS 40.0%
!! ATGTGAGGGGTTGATTTTGT+AGG + chr4_4:45353831-45353850 None:intergenic 40.0%
TAAGTAGTTGTGAGACGGTT+TGG - chr4_4:45354057-45354076 Msa0683010:intron 40.0%
AAGTAGTTGTGAGACGGTTT+GGG - chr4_4:45354058-45354077 Msa0683010:intron 40.0%
AAGGTATGTGTGTTTGTGCA+TGG - chr4_4:45354589-45354608 Msa0683010:intron 40.0%
TGACTTTGTAGGGGTGAAAA+TGG - chr4_4:45355026-45355045 Msa0683010:intron 40.0%
TGAAAATGGAGAGCTGAGAT+TGG - chr4_4:45355040-45355059 Msa0683010:intron 40.0%
GAAAATGGAGAGCTGAGATT+GGG - chr4_4:45355041-45355060 Msa0683010:intron 40.0%
AGAGCTGTTAGACCTAGAAA+TGG - chr4_4:45355071-45355090 Msa0683010:intron 40.0%
GATTCAGGAAGACCATTTCT+AGG + chr4_4:45355086-45355105 None:intergenic 40.0%
GGTCTTCCTGAATCAATTGT+TGG - chr4_4:45355092-45355111 Msa0683010:intron 40.0%
!! CATGACTTGCTCTGTAACAT+GGG + chr4_4:45355331-45355350 None:intergenic 40.0%
TGGATGAATCACCAGAAAGA+AGG - chr4_4:45355438-45355457 Msa0683010:intron 40.0%
CACTACTACACCTACAAGAT+AGG + chr4_4:45355537-45355556 None:intergenic 40.0%
CTATCTTGTAGGTGTAGTAG+TGG - chr4_4:45355535-45355554 Msa0683010:CDS 40.0%
GATGGCCTAAATCAAAATGG+AGG - chr4_4:45355593-45355612 Msa0683010:CDS 40.0%
!! ATCAAAATGGAGGTGCTTGA+TGG - chr4_4:45355603-45355622 Msa0683010:CDS 40.0%
AGCTTTCTGTGACATACAAC+AGG - chr4_4:45355821-45355840 Msa0683010:intron 40.0%
GTGACATACAACAGGTAAGA+TGG - chr4_4:45355829-45355848 Msa0683010:intron 40.0%
ATACCAGTGATGAGGTGATT+GGG + chr4_4:45355990-45356009 None:intergenic 40.0%
TAGGATTCATACCAGTGATG+AGG + chr4_4:45355998-45356017 None:intergenic 40.0%
AAGCATACCATCTCACCATT+AGG + chr4_4:45356017-45356036 None:intergenic 40.0%
TCTTTCACTCATCTTGGGTT+GGG + chr4_4:45356901-45356920 None:intergenic 40.0%
TTCTTTCACTCATCTTGGGT+TGG + chr4_4:45356902-45356921 None:intergenic 40.0%
! TGAGTTTAGCTCAGTTGGTT+GGG - chr4_4:45357363-45357382 Msa0683010:intron 40.0%
GCATAAAATATGCAAGGTCC+GGG - chr4_4:45357391-45357410 Msa0683010:intron 40.0%
TGATTTCAACATCGGAGCTT+GGG - chr4_4:45357785-45357804 Msa0683010:intron 40.0%
TGCAGATTGAAAACTAGGCT+TGG + chr4_4:45357814-45357833 None:intergenic 40.0%
CTATCGATGGTGTGTTAAAC+GGG + chr4_4:45357920-45357939 None:intergenic 40.0%
GTTTAACACACCATCGATAG+TGG - chr4_4:45357920-45357939 Msa0683010:intron 40.0%
GTTTCTGCTTCTGCTTCATT+AGG - chr4_4:45358017-45358036 Msa0683010:intron 40.0%
TTCTGCTTCTGCTTCATTAG+GGG - chr4_4:45358019-45358038 Msa0683010:intron 40.0%
CAAATGAAGGTTCACAAGCA+AGG - chr4_4:45358260-45358279 Msa0683010:intron 40.0%
! ATTGATCTCTCTAGGTTGAG+CGG - chr4_4:45358302-45358321 Msa0683010:intron 40.0%
CAATGATCTTCTGAGTGAAC+TGG - chr4_4:45358328-45358347 Msa0683010:intron 40.0%
ACTGGAGAAACTATTTGGCA+TGG - chr4_4:45358346-45358365 Msa0683010:intron 40.0%
GAGAAACTATTTGGCATGGA+AGG - chr4_4:45358350-45358369 Msa0683010:intron 40.0%
TTGGAGATTCTGATAAGGGA+TGG - chr4_4:45358378-45358397 Msa0683010:intron 40.0%
GAATGACATAATGGTTGTGG+GGG - chr4_4:45358424-45358443 Msa0683010:intron 40.0%
TTTGATCCACGTAGTGAACT+CGG - chr4_4:45358797-45358816 Msa0683010:CDS 40.0%
CATCTTCTCCACTTCTTCTT+TGG + chr4_4:45358972-45358991 None:intergenic 40.0%
GAAGTGGAGAAGATGACATT+TGG - chr4_4:45358977-45358996 Msa0683010:CDS 40.0%
TACTCATAGCTGTTTGGATC+AGG - chr4_4:45359018-45359037 Msa0683010:CDS 40.0%
CTAAAGTTTCAGGGTTGTGT+TGG - chr4_4:45359114-45359133 Msa0683010:exon 40.0%
!! TAAGTGCTAGTCTTGGAAGT+TGG - chr4_4:45359269-45359288 Msa0683010:five_prime_UTR 40.0%
GGAATTTGGTAAATGCACTC+TGG - chr4_4:45359478-45359497 Msa0683010:five_prime_UTR 40.0%
! GAAAAAAGGGTGTGACCAAG+TGG + chr4_4:45352291-45352310 None:intergenic 45.0%
! GATTAGTTGTGTTCCGGTGT+CGG - chr4_4:45352805-45352824 Msa0683010:intron 45.0%
CAACCTATGAAGCACGGATA+CGG + chr4_4:45352925-45352944 None:intergenic 45.0%
ACAAGTTACTCTGCTACCTC+AGG - chr4_4:45353032-45353051 Msa0683010:intron 45.0%
AAAAAACCAACCTCAGCCTG+AGG + chr4_4:45353051-45353070 None:intergenic 45.0%
GACATCTGTTATACTCCCTC+CGG + chr4_4:45353358-45353377 None:intergenic 45.0%
TCCTAGTTAGGTGTGTTCAG+TGG - chr4_4:45353424-45353443 Msa0683010:CDS 45.0%
TCCACTGAACACACCTAACT+AGG + chr4_4:45353428-45353447 None:intergenic 45.0%
AGTTAGGTGTGTTCAGTGGA+TGG - chr4_4:45353428-45353447 Msa0683010:CDS 45.0%
!! GTTTTCGCTTTTCAGTTGGC+AGG - chr4_4:45353741-45353760 Msa0683010:CDS 45.0%
TGTCTTGCAGAACATGTGAG+GGG + chr4_4:45353844-45353863 None:intergenic 45.0%
GTGTCTTGCAGAACATGTGA+GGG + chr4_4:45353845-45353864 None:intergenic 45.0%
AGTGTCTTGCAGAACATGTG+AGG + chr4_4:45353846-45353865 None:intergenic 45.0%
!! GGGAGACTTTAAGCCTTGTT+TGG + chr4_4:45354275-45354294 None:intergenic 45.0%
TTGGCAACAAGCTCTTGAGA+GGG + chr4_4:45354354-45354373 None:intergenic 45.0%
TTTGGCAACAAGCTCTTGAG+AGG + chr4_4:45354355-45354374 None:intergenic 45.0%
! CTAATTTGTCAGGTCAGCCA+AGG - chr4_4:45354489-45354508 Msa0683010:intron 45.0%
GTGATGCTGTGCTCTTTCTA+AGG - chr4_4:45354570-45354589 Msa0683010:intron 45.0%
!! ATATCCTAGAAGTGCCCTCT+CGG - chr4_4:45354626-45354645 Msa0683010:intron 45.0%
!! GCATGACTTGCTCTGTAACA+TGG + chr4_4:45355332-45355351 None:intergenic 45.0%
ATCCAGTGAGTATAGGGACA+AGG - chr4_4:45355396-45355415 Msa0683010:intron 45.0%
AACCTTGTCCCTATACTCAC+TGG + chr4_4:45355401-45355420 None:intergenic 45.0%
ACAACAGGTAAGATGGGATG+AGG - chr4_4:45355836-45355855 Msa0683010:intron 45.0%
GAAGAAAGATCGATCTCCCA+TGG + chr4_4:45355894-45355913 None:intergenic 45.0%
TGGGGAAGACTGAATGCTTA+GGG + chr4_4:45355928-45355947 None:intergenic 45.0%
TTGGGGAAGACTGAATGCTT+AGG + chr4_4:45355929-45355948 None:intergenic 45.0%
CATACCAGTGATGAGGTGAT+TGG + chr4_4:45355991-45356010 None:intergenic 45.0%
TTTATGGCAGCAGGAATCAG+TGG - chr4_4:45356265-45356284 Msa0683010:intron 45.0%
AGCAGGAATCAGTGGAATGA+TGG - chr4_4:45356273-45356292 Msa0683010:intron 45.0%
GCAGGAATCAGTGGAATGAT+GGG - chr4_4:45356274-45356293 Msa0683010:intron 45.0%
GGAGTCAGTAAGATCACCAA+AGG - chr4_4:45356303-45356322 Msa0683010:intron 45.0%
! TCTCGTGAGTTTAGCTCAGT+TGG - chr4_4:45357358-45357377 Msa0683010:intron 45.0%
! GTGAGTTTAGCTCAGTTGGT+TGG - chr4_4:45357362-45357381 Msa0683010:intron 45.0%
! GAAGTGCTCAACTCAAAACC+TGG + chr4_4:45357597-45357616 None:intergenic 45.0%
CATCAAAACCTGGCATCAAC+TGG - chr4_4:45357624-45357643 Msa0683010:CDS 45.0%
AACCTGGCATCAACTGGAAT+AGG - chr4_4:45357630-45357649 Msa0683010:CDS 45.0%
! TTCCTATTCCAGTTGATGCC+AGG + chr4_4:45357635-45357654 None:intergenic 45.0%
AACTTTCCAAGGGTCTTGCA+AGG - chr4_4:45357723-45357742 Msa0683010:CDS 45.0%
CTGATTTCAACATCGGAGCT+TGG - chr4_4:45357784-45357803 Msa0683010:intron 45.0%
GATTTCAACATCGGAGCTTG+GGG - chr4_4:45357786-45357805 Msa0683010:intron 45.0%
GGAGCTTATGCTCATTTGGA+AGG + chr4_4:45357989-45358008 None:intergenic 45.0%
TCCAAATGAGCATAAGCTCC+AGG - chr4_4:45357989-45358008 Msa0683010:intron 45.0%
TCCTGGAGCTTATGCTCATT+TGG + chr4_4:45357993-45358012 None:intergenic 45.0%
CAGAAGCAGAAACATTGTCC+TGG + chr4_4:45358010-45358029 None:intergenic 45.0%
! AGGAAAGCCGAATAGTTTGC+AGG + chr4_4:45358096-45358115 None:intergenic 45.0%
CTATTCGGCTTTCCTTTGTC+TGG - chr4_4:45358101-45358120 Msa0683010:intron 45.0%
AAAGGAGTTGCACAAAGGTG+AGG - chr4_4:45358159-45358178 Msa0683010:intron 45.0%
AAGGAGTTGCACAAAGGTGA+GGG - chr4_4:45358160-45358179 Msa0683010:intron 45.0%
CACAAGCAAGGAAGCTTAGT+TGG - chr4_4:45358272-45358291 Msa0683010:intron 45.0%
GAAGAGCCATTGATCTCTCT+AGG - chr4_4:45358294-45358313 Msa0683010:intron 45.0%
GCTCAACCTAGAGAGATCAA+TGG + chr4_4:45358303-45358322 None:intergenic 45.0%
TTTGGCATGGAAGGACTTCT+TGG - chr4_4:45358359-45358378 Msa0683010:intron 45.0%
GAGATTCTGATAAGGGATGG+AGG - chr4_4:45358381-45358400 Msa0683010:intron 45.0%
CATTCTCACTGTCAGTGTAG+AGG + chr4_4:45358409-45358428 None:intergenic 45.0%
CCAACTGAGGAAGACTTTGA+AGG + chr4_4:45359061-45359080 None:intergenic 45.0%
CCTTCAAAGTCTTCCTCAGT+TGG - chr4_4:45359058-45359077 Msa0683010:CDS 45.0%
ATAATCTGGCTGACCAACTG+AGG + chr4_4:45359074-45359093 None:intergenic 45.0%
GCTGAGCTAACTAGCCAAAA+GGG + chr4_4:45359200-45359219 None:intergenic 45.0%
TGCTGAGCTAACTAGCCAAA+AGG + chr4_4:45359201-45359220 None:intergenic 45.0%
!! TGAATGTGTTTGGTTTGGGG+TGG - chr4_4:45359395-45359414 Msa0683010:five_prime_UTR 45.0%
!! GTTTGGTTTGGGGTGGAATT+TGG - chr4_4:45359402-45359421 Msa0683010:five_prime_UTR 45.0%
!!! AAAATTAATGTTTTTTTTAA+TGG - chr4_4:45357286-45357305 Msa0683010:intron 5.0%
GAACTATGGCATGCTTGTGC+TGG - chr4_4:45352555-45352574 Msa0683010:CDS 50.0%
TTCAGCCACAGATCTTCTGC+AGG - chr4_4:45352694-45352713 Msa0683010:intron 50.0%
TCAGCCACAGATCTTCTGCA+GGG - chr4_4:45352695-45352714 Msa0683010:intron 50.0%
ACAACCCTGCAGAAGATCTG+TGG + chr4_4:45352702-45352721 None:intergenic 50.0%
ATGAAGCACGGATACGGACA+CGG + chr4_4:45352919-45352938 None:intergenic 50.0%
TGTCCGTATCCGTGCTTCAT+AGG - chr4_4:45352919-45352938 Msa0683010:intron 50.0%
GGCCAACAAGGAGAATGATG+AGG - chr4_4:45353002-45353021 Msa0683010:intron 50.0%
TGCTTATACCAGTGACCGCA+GGG + chr4_4:45353219-45353238 None:intergenic 50.0%
TTGCTTATACCAGTGACCGC+AGG + chr4_4:45353220-45353239 None:intergenic 50.0%
TCAGTTGGCAGGGATGCATA+TGG - chr4_4:45353752-45353771 Msa0683010:CDS 50.0%
TTGGCAGGGATGCATATGGA+AGG - chr4_4:45353756-45353775 Msa0683010:CDS 50.0%
GAAGGAGATGAAGAGGGAGA+TGG - chr4_4:45353798-45353817 Msa0683010:CDS 50.0%
GAGATGAAGAGGGAGATGGA+GGG - chr4_4:45353802-45353821 Msa0683010:CDS 50.0%
GTCTCTGATACCAGCACTCA+TGG - chr4_4:45353870-45353889 Msa0683010:CDS 50.0%
TCTGATACCAGCACTCATGG+TGG - chr4_4:45353873-45353892 Msa0683010:CDS 50.0%
CAATCTTCAGCAGCTCTACG+AGG + chr4_4:45353909-45353928 None:intergenic 50.0%
CTTGTTGCCAAAGACCTGCA+TGG - chr4_4:45354363-45354382 Msa0683010:intron 50.0%
ATTTCCACTCCACACCATGC+AGG + chr4_4:45354380-45354399 None:intergenic 50.0%
ATTTGTCAGGTCAGCCAAGG+CGG - chr4_4:45354492-45354511 Msa0683010:intron 50.0%
! ATCAAGACCGAGTATCGCCA+TGG - chr4_4:45355874-45355893 Msa0683010:intron 50.0%
! TCAAGACCGAGTATCGCCAT+GGG - chr4_4:45355875-45355894 Msa0683010:intron 50.0%
GAAGACTGAATGCTTAGGGG+AGG + chr4_4:45355924-45355943 None:intergenic 50.0%
GGGGAAGACTGAATGCTTAG+GGG + chr4_4:45355927-45355946 None:intergenic 50.0%
TCCGCGGTTTCTTCAGTCTT+GGG + chr4_4:45355947-45355966 None:intergenic 50.0%
AGTGATGAGGTGATTGGGTG+AGG + chr4_4:45355985-45356004 None:intergenic 50.0%
TCACCCAATCACCTCATCAC+TGG - chr4_4:45355984-45356003 Msa0683010:intron 50.0%
!! CAGTGGAATGATGGGCTTTG+AGG - chr4_4:45356282-45356301 Msa0683010:intron 50.0%
AGAAAAAACCACGGGAGACG+TGG - chr4_4:45356838-45356857 Msa0683010:intron 50.0%
GAAAAAACCACGGGAGACGT+GGG - chr4_4:45356839-45356858 Msa0683010:intron 50.0%
AAAAAACCACGGGAGACGTG+GGG - chr4_4:45356840-45356859 Msa0683010:intron 50.0%
AGACGTGGGGGGAAAAACAA+AGG - chr4_4:45356853-45356872 Msa0683010:intron 50.0%
GACAAAGTAACCAACCAGCC+AGG - chr4_4:45357576-45357595 Msa0683010:intron 50.0%
CAACTCAAAACCTGGCTGGT+TGG + chr4_4:45357589-45357608 None:intergenic 50.0%
TGCTCAACTCAAAACCTGGC+TGG + chr4_4:45357593-45357612 None:intergenic 50.0%
TCTTGACCTTGCAAGACCCT+TGG + chr4_4:45357732-45357751 None:intergenic 50.0%
! AACACACCATCGATAGTGGC+AGG - chr4_4:45357924-45357943 Msa0683010:intron 50.0%
! ACACACCATCGATAGTGGCA+GGG - chr4_4:45357925-45357944 Msa0683010:intron 50.0%
ATGTTCCCTGCCACTATCGA+TGG + chr4_4:45357933-45357952 None:intergenic 50.0%
CTACTAGGTTCGCCAGACAA+AGG + chr4_4:45358116-45358135 None:intergenic 50.0%
ACTAAGCCGAGTTCACTACG+TGG + chr4_4:45358806-45358825 None:intergenic 50.0%
CGTAGTGAACTCGGCTTAGT+TGG - chr4_4:45358806-45358825 Msa0683010:CDS 50.0%
GTGAACTCGGCTTAGTTGGT+TGG - chr4_4:45358810-45358829 Msa0683010:CDS 50.0%
ACTCGGCTTAGTTGGTTGGT+TGG - chr4_4:45358814-45358833 Msa0683010:CDS 50.0%
! TTGTGTTCCGGTGTCGGACA+CGG - chr4_4:45352811-45352830 Msa0683010:intron 55.0%
TACTCTGCTACCTCAGGCTG+AGG - chr4_4:45353038-45353057 Msa0683010:intron 55.0%
TGAATACTCCCTGCGGTCAC+TGG - chr4_4:45353208-45353227 Msa0683010:CDS 55.0%
GGAGATGAAGAGGGAGATGG+AGG - chr4_4:45353801-45353820 Msa0683010:CDS 55.0%
GGAGAATCCACCATGAGTGC+TGG + chr4_4:45353883-45353902 None:intergenic 55.0%
TTCAGCAGCTCTACGAGGCA+CGG + chr4_4:45353904-45353923 None:intergenic 55.0%
TGCCAAAGACCTGCATGGTG+TGG - chr4_4:45354368-45354387 Msa0683010:intron 55.0%
CTCCACACCATGCAGGTCTT+TGG + chr4_4:45354373-45354392 None:intergenic 55.0%
AAGACCTGCATGGTGTGGAG+TGG - chr4_4:45354373-45354392 Msa0683010:intron 55.0%
TACCTTCTCCAGACCCCACT+TGG - chr4_4:45354676-45354695 Msa0683010:intron 55.0%
GTAACGCAGTCTAGTGTGCG+AGG + chr4_4:45354708-45354727 None:intergenic 55.0%
CGATCTCCCATGGCGATACT+CGG + chr4_4:45355884-45355903 None:intergenic 55.0%
TGAATGCTTAGGGGAGGCTG+AGG + chr4_4:45355918-45355937 None:intergenic 55.0%
CCGCGGTTTCTTCAGTCTTG+GGG + chr4_4:45355946-45355965 None:intergenic 55.0%
CCCCAAGACTGAAGAAACCG+CGG - chr4_4:45355943-45355962 Msa0683010:CDS 55.0%
GTCCGCGGTTTCTTCAGTCT+TGG + chr4_4:45355948-45355967 None:intergenic 55.0%
AGACTGAAGAAACCGCGGAC+CGG - chr4_4:45355948-45355967 Msa0683010:CDS 55.0%
GGGTGAGGTAACCAGTAGAC+CGG + chr4_4:45355970-45355989 None:intergenic 55.0%
AAAAACCACGGGAGACGTGG+GGG - chr4_4:45356841-45356860 Msa0683010:intron 55.0%
AAGGTCCGGGATTCAAACCC+CGG - chr4_4:45357404-45357423 Msa0683010:intron 55.0%
TGGTTGTGGGGGATGATCCA+TGG - chr4_4:45358435-45358454 Msa0683010:intron 55.0%
! TGTGTTCCGGTGTCGGACAC+GGG - chr4_4:45352812-45352831 Msa0683010:intron 60.0%
CTGCTACCTCAGGCTGAGGT+TGG - chr4_4:45353042-45353061 Msa0683010:intron 60.0%
GTTGTGAGCAGATGCCGCCT+TGG + chr4_4:45354509-45354528 None:intergenic 60.0%
AGGCGGCATCTGCTCACAAC+TGG - chr4_4:45354509-45354528 Msa0683010:intron 60.0%
GGCATCTGCTCACAACTGGC+TGG - chr4_4:45354513-45354532 Msa0683010:intron 60.0%
!! CAAGCCGAGAGGGCACTTCT+AGG + chr4_4:45354633-45354652 None:intergenic 60.0%
! AAGTGCCCTCTCGGCTTGCA+GGG - chr4_4:45354635-45354654 Msa0683010:intron 60.0%
CACCAAGTGGGGTCTGGAGA+AGG + chr4_4:45354681-45354700 None:intergenic 60.0%
CTTCTCCAGACCCCACTTGG+TGG - chr4_4:45354679-45354698 Msa0683010:intron 60.0%
TGCGAGGCTTCCACCAAGTG+GGG + chr4_4:45354692-45354711 None:intergenic 60.0%
GTGCGAGGCTTCCACCAAGT+GGG + chr4_4:45354693-45354712 None:intergenic 60.0%
TGTGCGAGGCTTCCACCAAG+TGG + chr4_4:45354694-45354713 None:intergenic 60.0%
GTAACCAGTAGACCGGTCCG+CGG + chr4_4:45355963-45355982 None:intergenic 60.0%
AAAACCACGGGAGACGTGGG+GGG - chr4_4:45356842-45356861 Msa0683010:intron 60.0%
!! CTTGGGTTGGGACTGCACGT+GGG + chr4_4:45356889-45356908 None:intergenic 60.0%
!! TCTTGGGTTGGGACTGCACG+TGG + chr4_4:45356890-45356909 None:intergenic 60.0%
ACACGACCCGTGTCCGACAC+CGG + chr4_4:45352821-45352840 None:intergenic 65.0%
! GAAGTGCCCTCTCGGCTTGC+AGG - chr4_4:45354634-45354653 Msa0683010:intron 65.0%
! AGTGCCCTCTCGGCTTGCAG+GGG - chr4_4:45354636-45354655 Msa0683010:intron 65.0%
TTGCCCCCTGCAAGCCGAGA+GGG + chr4_4:45354643-45354662 None:intergenic 65.0%
GGCTTCCACCAAGTGGGGTC+TGG + chr4_4:45354687-45354706 None:intergenic 65.0%
GAAACCGCGGACCGGTCTAC+TGG - chr4_4:45355956-45355975 Msa0683010:intron 65.0%
! TTTTCCCCCCACGTCTCCCG+TGG + chr4_4:45356849-45356868 None:intergenic 65.0%
! GTGCCCTCTCGGCTTGCAGG+GGG - chr4_4:45354637-45354656 Msa0683010:intron 70.0%
CTTGCCCCCTGCAAGCCGAG+AGG + chr4_4:45354644-45354663 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 45352003 45359517 45352003 ID=Msa0683010;Name=Msa0683010
chr4_4 mRNA 45352003 45359517 45352003 ID=Msa0683010-mRNA-1;Parent=Msa0683010;Name=Msa0683010-mRNA-1;_AED=0.09;_eAED=0.09;_QI=393|0.83|0.84|1|1|1|13|400|770
chr4_4 exon 45352003 45352589 45352003 ID=Msa0683010-mRNA-1:exon:10986;Parent=Msa0683010-mRNA-1
chr4_4 exon 45353061 45353251 45353061 ID=Msa0683010-mRNA-1:exon:10985;Parent=Msa0683010-mRNA-1
chr4_4 exon 45353345 45353926 45353345 ID=Msa0683010-mRNA-1:exon:10984;Parent=Msa0683010-mRNA-1
chr4_4 exon 45355196 45355245 45355196 ID=Msa0683010-mRNA-1:exon:10983;Parent=Msa0683010-mRNA-1
chr4_4 exon 45355500 45355677 45355500 ID=Msa0683010-mRNA-1:exon:10982;Parent=Msa0683010-mRNA-1
chr4_4 exon 45355896 45355974 45355896 ID=Msa0683010-mRNA-1:exon:10981;Parent=Msa0683010-mRNA-1
chr4_4 exon 45356061 45356180 45356061 ID=Msa0683010-mRNA-1:exon:10980;Parent=Msa0683010-mRNA-1
chr4_4 exon 45356319 45356483 45356319 ID=Msa0683010-mRNA-1:exon:10979;Parent=Msa0683010-mRNA-1
chr4_4 exon 45356929 45357019 45356929 ID=Msa0683010-mRNA-1:exon:10978;Parent=Msa0683010-mRNA-1
chr4_4 exon 45357103 45357187 45357103 ID=Msa0683010-mRNA-1:exon:10977;Parent=Msa0683010-mRNA-1
chr4_4 exon 45357579 45357764 45357579 ID=Msa0683010-mRNA-1:exon:10976;Parent=Msa0683010-mRNA-1
chr4_4 exon 45358461 45358517 45358461 ID=Msa0683010-mRNA-1:exon:10975;Parent=Msa0683010-mRNA-1
chr4_4 exon 45358783 45359517 45358783 ID=Msa0683010-mRNA-1:exon:10974;Parent=Msa0683010-mRNA-1
chr4_4 five_prime_UTR 45359125 45359517 45359125 ID=Msa0683010-mRNA-1:five_prime_utr;Parent=Msa0683010-mRNA-1
chr4_4 CDS 45358783 45359124 45358783 ID=Msa0683010-mRNA-1:cds;Parent=Msa0683010-mRNA-1
chr4_4 CDS 45358461 45358517 45358461 ID=Msa0683010-mRNA-1:cds;Parent=Msa0683010-mRNA-1
chr4_4 CDS 45357579 45357764 45357579 ID=Msa0683010-mRNA-1:cds;Parent=Msa0683010-mRNA-1
chr4_4 CDS 45357103 45357187 45357103 ID=Msa0683010-mRNA-1:cds;Parent=Msa0683010-mRNA-1
chr4_4 CDS 45356929 45357019 45356929 ID=Msa0683010-mRNA-1:cds;Parent=Msa0683010-mRNA-1
chr4_4 CDS 45356319 45356483 45356319 ID=Msa0683010-mRNA-1:cds;Parent=Msa0683010-mRNA-1
chr4_4 CDS 45356061 45356180 45356061 ID=Msa0683010-mRNA-1:cds;Parent=Msa0683010-mRNA-1
chr4_4 CDS 45355896 45355974 45355896 ID=Msa0683010-mRNA-1:cds;Parent=Msa0683010-mRNA-1
chr4_4 CDS 45355500 45355677 45355500 ID=Msa0683010-mRNA-1:cds;Parent=Msa0683010-mRNA-1
chr4_4 CDS 45355196 45355245 45355196 ID=Msa0683010-mRNA-1:cds;Parent=Msa0683010-mRNA-1
chr4_4 CDS 45353345 45353926 45353345 ID=Msa0683010-mRNA-1:cds;Parent=Msa0683010-mRNA-1
chr4_4 CDS 45353061 45353251 45353061 ID=Msa0683010-mRNA-1:cds;Parent=Msa0683010-mRNA-1
chr4_4 CDS 45352403 45352589 45352403 ID=Msa0683010-mRNA-1:cds;Parent=Msa0683010-mRNA-1
chr4_4 three_prime_UTR 45352003 45352402 45352003 ID=Msa0683010-mRNA-1:three_prime_utr;Parent=Msa0683010-mRNA-1
Gene Sequence

>Msa0683010

ATGGAAATTGATCTAAACAATGAAGTGATTGAGGTTGAGAAGAATGCATTGTGCCATAAGGAATGTGAAAAAGGTTTTTGTTTCTGTGTTTCTTGTTTGTCTCCTTCAACTTGTTCATCTTCAAGTTCAACTTCACCACTTGTTTCTTCTTCTTATCTTGAACTATGGCATGCTTGTGCTGGCCCTCTTACTTCACTTCCTAAGAAAGGAAATGTTGTGGTGTATTTTCCACAAGGTCATTTAGAACAATTTGCTTCTTTCTCTCCTTTTAAACAATTGGAGATACCAAACTATGATCTTCAGCCACAGATCTTCTGCAGGGTTGTCAATGTCCAGCTACTTGCCAACAAGGAGAATGATGAGGTTTATACACAAGTTACTCTGCTACCTCAGGCTGAGTTGGCAGGGATGCATATGGAAGGAAAAGAAGTTGAGGAATTAGAAGGAGATGAAGAGGGAGATGGAGGGTCACCTACAAAATCAACCCCTCACATGTTCTGCAAGACACTAACTGTCTCTGATACCAGCACTCATGGTGGATTCTCCGTGCCTCGTAGAGCTGCTGAAGATTGTTTTCCTCCATTGGATTATAAGCTGCAGAGACCCTCTCAAGAGCTTGTTGCCAAAGACCTGCATGGTGTGGAGTGGAAATTTCGCCATATTTATAGAGGTCAGCCAAGGCGGCATCTGCTCACAACTGGCTGGAGCATTTTTGTGAACCAAAAGAATCTTGTTTCTGGTGATGCTGTGCTCTTTCTAAGGGGTGAAAATGGAGAGCTGAGATTGGGAATCAGAAGAGCTGTTAGACCTAGAAATGGTCTTCCTGAATCAATTGTTGGTAATCAGAATTGTTATCCCAATTTCCTTTCATCTGTTGCAAATGCTATATCCACCAAAAGCATGTTTCATGTTTTCTATAGTCCAAGAGCAAGTCATGCAGAGTTTGTTGTTCCGTACCAAAAATATGTTAAAAGCATCAAGAATCCAGTGAGTATAGGGACAAGGTTCAAAATGAGAATTGAAATGGATGAATCACCAGAAAGAAGGTGTAGTAGTGGTATGTTGATTGGAATAAATGATTTGGATCCCTATAGATGGCCTAAATCAAAATGGAGGTGCTTGATGGTAAGATGGGATGAGGATACTGAGACTAATCATCAAGACCGAGTATCGCCATGGGAGATCGATCTTTCTTCTCCTCAGCCTCCCCTAAGCATTCAGTCTTCCCCAAGACTGAAGAAACCGCGGACCGGTCTACTGGTTACCTCACCCAATCACCTCATCACTGGTATGAATCCTAATGCAGGAATCAGTGGAATGATGGGCTTTGAGGAGTCAGTAAGATCACCAAAGCCAGGTTTTGAGTTGAGCACTTCAAGTCATCATCAAAACCTGGCATCAACTGGAATAGGAAAAGTAGTTACATCCTCTGAGCTTATGAGTGTTAATCCTTTCAGTTATGCAGGCTTTATGGAAAGTAACAACTTTCCAAGGGTCTTGCAAGGTCAAGAAATATGTAAACTGAAATCCCTTTCAGGAAAAGCTGATTTCAACATCGGAGCTTGGGGAACCAAGCCTAGTTTTCAATCTGCATGTTTTCCTTACAGAGATATTGACAAAGCTAATCAAGCTAATATTTTTAGCTCAAAACACACCAATTTCATGAGTGATAATGTCCCGTTTAACACACCATCGATAGTGGCAGGGAACATTAGAAAAGAAGTTGGAAGATCTGGATCTAATCTCCTTCCAAATGAGCATAAGCTCCAGGACAATGTTTCTGCTTCTGCTTCATTAGGGGATACTAATATTAAAGTTCCAAATGATAACAATGTCAAGGGAAATGCAAATTCCTGCAAACTATTCGGCTTTCCTTTGTCTGGCGAACCTAGTAGTCAAAATTTACAGAACACTTCAAAAAGGAGTTGCACAAAGGTTCACAAGCAAGGAAGCTTAGTTGGAAGAGCCATTGATCTCTCTAGGTTGAGCGGCTACAATGATCTTCTGAGTGAACTGGAGAAACTATTTGGCATGGAAGGACTTCTTGGAGATTCTGATAAGGGATGGAGGATCCTCTACACTGACAGTGAGAATGACATAATGGTTGTGGGGGATGATCCATGGCATGAGTTTTGTGATGTTGTGTCTAAAATCCATATATATACCAAAGAAGAAGTGGAGAAGATGACATTTGGGATGATGACCAATGATGATACTCATAGCTGTTTGGATCAGGCACCAGTTATTATTGAACCTTCAAAGTCTTCCTCAGTTGGTCAGCCAGATTATTCTCCAACAGTAGTTAGAGTCTAA
Protein sequence

>Msa0683010

MEIDLNNEVIEVEKNALCHKECEKGFCFCVSCLSPSTCSSSSSTSPLVSSSYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQFASFSPFKQLEIPNYDLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQAELAGMHMEGKEVEELEGDEEGDGGSPTKSTPHMFCKTLTVSDTSTHGGFSVPRRAAEDCFPPLDYKLQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVNQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNGLPESIVGNQNCYPNFLSSVANAISTKSMFHVFYSPRASHAEFVVPYQKYVKSIKNPVSIGTRFKMRIEMDESPERRCSSGMLIGINDLDPYRWPKSKWRCLMVRWDEDTETNHQDRVSPWEIDLSSPQPPLSIQSSPRLKKPRTGLLVTSPNHLITGMNPNAGISGMMGFEESVRSPKPGFELSTSSHHQNLASTGIGKVVTSSELMSVNPFSYAGFMESNNFPRVLQGQEICKLKSLSGKADFNIGAWGTKPSFQSACFPYRDIDKANQANIFSSKHTNFMSDNVPFNTPSIVAGNIRKEVGRSGSNLLPNEHKLQDNVSASASLGDTNIKVPNDNNVKGNANSCKLFGFPLSGEPSSQNLQNTSKRSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELEKLFGMEGLLGDSDKGWRILYTDSENDIMVVGDDPWHEFCDVVSKIHIYTKEEVEKMTFGMMTNDDTHSCLDQAPVIIEPSKSSSVGQPDYSPTVVRV*