Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0683360 | XP_039689583.1 | 95.178 | 1037 | 36 | 3 | 1 | 1027 | 1 | 1033 | 0.0 | 2031 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0683360 | sp|O95628|CNOT4_HUMAN | 42.126 | 254 | 134 | 5 | 9 | 257 | 14 | 259 | 6.36e-59 | 216 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0683360 | A0A396I5D0 | 94.269 | 1047 | 36 | 4 | 1 | 1027 | 1 | 1043 | 0.0 | 2022 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0683360 | Msa0683620 | 0.979486 | 4.493632e-148 | -8.615850e-47 |
Msa0602570 | Msa0683360 | 0.806234 | 9.082663e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0683360 | MtrunA17_Chr4g0030181 | 94.269 | 1047 | 36 | 4 | 1 | 1027 | 1 | 1043 | 0.0 | 2022 |
Msa0683360 | MtrunA17_Chr2g0325921 | 62.762 | 1050 | 324 | 17 | 1 | 1027 | 1 | 1006 | 0.0 | 1235 |
Msa0683360 | MtrunA17_Chr1g0181751 | 66.019 | 309 | 99 | 4 | 1 | 308 | 1 | 304 | 3.38e-134 | 427 |
Msa0683360 | MtrunA17_Chr1g0181751 | 38.592 | 355 | 191 | 14 | 666 | 1016 | 577 | 908 | 7.48e-49 | 188 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0683360 | AT3G45630.2 | 46.560 | 1061 | 461 | 31 | 1 | 1027 | 1 | 989 | 0.0 | 791 |
Msa0683360 | AT3G45630.1 | 46.560 | 1061 | 461 | 31 | 1 | 1027 | 1 | 989 | 0.0 | 791 |
Msa0683360 | AT5G60170.2 | 45.472 | 1060 | 472 | 29 | 1 | 1027 | 1 | 987 | 0.0 | 780 |
Msa0683360 | AT5G60170.1 | 45.283 | 1060 | 472 | 30 | 1 | 1027 | 1 | 985 | 0.0 | 771 |
Msa0683360 | AT2G28540.1 | 60.335 | 358 | 119 | 5 | 1 | 357 | 1 | 336 | 6.30e-149 | 466 |
Msa0683360 | AT2G28540.2 | 56.812 | 389 | 139 | 6 | 1 | 388 | 1 | 361 | 1.11e-147 | 465 |
Msa0683360 | AT3G48070.1 | 42.857 | 63 | 30 | 1 | 8 | 70 | 243 | 299 | 1.77e-11 | 67.0 |
Msa0683360 | AT5G62910.1 | 43.103 | 58 | 27 | 1 | 8 | 65 | 251 | 302 | 2.68e-11 | 66.6 |
Msa0683360 | AT5G62910.2 | 43.103 | 58 | 27 | 1 | 8 | 65 | 251 | 302 | 2.68e-11 | 66.6 |
Msa0683360 | AT3G48070.2 | 42.857 | 63 | 30 | 1 | 8 | 70 | 243 | 299 | 3.57e-11 | 66.6 |
Msa0683360 | AT3G48070.3 | 42.857 | 63 | 30 | 1 | 8 | 70 | 194 | 250 | 3.94e-11 | 65.9 |
Find 261 sgRNAs with CRISPR-Local
Find 636 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACCTTAGATTTCCTGAAAT+TGG | 0.060258 | 4_4:+45809214 | Msa0683360:CDS |
GCTTCTTCCAACAAGCTTTC+TGG | 0.145083 | 4_4:+45806640 | Msa0683360:CDS |
CACAGGCGAAATTGAATTTA+TGG | 0.174838 | 4_4:+45809036 | Msa0683360:CDS |
ATTTATGGATCCTGCTATTT+TGG | 0.179669 | 4_4:+45809051 | Msa0683360:CDS |
CTGTTGACTGTATCAGATTT+TGG | 0.200603 | 4_4:-45805296 | None:intergenic |
GATTTGCAGGTGAGCTGTTT+TGG | 0.206336 | 4_4:+45809911 | Msa0683360:three_prime_UTR |
TCACCTCCAAATGGAATTAA+TGG | 0.240073 | 4_4:+45805041 | Msa0683360:CDS |
GAATCTCAAATTCAATCTTT+TGG | 0.241208 | 4_4:+45806454 | Msa0683360:CDS |
CCGGCTGTATTGGTTGTTAT+CGG | 0.244156 | 4_4:-45805800 | None:intergenic |
GGTACTCATGACTGGTATAT+TGG | 0.245289 | 4_4:+45809611 | Msa0683360:three_prime_UTR |
TATCCTTGTGGTATGAAGTA+TGG | 0.245430 | 4_4:+45810108 | Msa0683360:three_prime_UTR |
CAGCCATAAATTACACTTCT+TGG | 0.255963 | 4_4:-45809651 | None:intergenic |
ATATATTGTTTAACAGATTT+CGG | 0.262309 | 4_4:-45805446 | None:intergenic |
ATCCCAAGAAGTGTAATTTA+TGG | 0.269085 | 4_4:+45809648 | Msa0683360:three_prime_UTR |
AAATGTACACGGATTTGTTT+TGG | 0.271434 | 4_4:+45804016 | Msa0683360:CDS |
CATTGGCCATTTGACAAGAT+TGG | 0.278280 | 4_4:-45809349 | None:intergenic |
CTGCAAATCCAGAACTAAAA+AGG | 0.286465 | 4_4:-45809897 | None:intergenic |
TGAAATGAATTTGGAGAAAA+AGG | 0.287175 | 4_4:+45803074 | Msa0683360:CDS |
AGCAGATATGTGTACCTTAA+AGG | 0.295462 | 4_4:-45804047 | None:intergenic |
CGAAACCTTGTTTACATAGT+TGG | 0.297705 | 4_4:+45803168 | Msa0683360:CDS |
CTCCAGAAGCGAGAGTATTT+TGG | 0.299226 | 4_4:+45803311 | Msa0683360:CDS |
TGCTGTTACGGGGACGATTC+AGG | 0.299403 | 4_4:+45805337 | Msa0683360:CDS |
TTGGTTAAATTGGATTAATA+TGG | 0.305560 | 4_4:+45809706 | Msa0683360:three_prime_UTR |
TTCAGCTTCCTCAAAGTTAC+TGG | 0.311605 | 4_4:-45806593 | None:intergenic |
CTGTTGACTGTATCAGGTTT+TGG | 0.312082 | 4_4:-45805248 | None:intergenic |
TTAAATGCTACTAACATTAC+TGG | 0.313862 | 4_4:+45805611 | Msa0683360:CDS |
ACTGCTGAATGAAATGAATT+TGG | 0.320971 | 4_4:+45803065 | Msa0683360:CDS |
GATATCTACAACAGAACATT+TGG | 0.326142 | 4_4:+45809502 | Msa0683360:CDS |
GACCAAAATACTCTCGCTTC+TGG | 0.331323 | 4_4:-45803313 | None:intergenic |
GGAACAGTGTGGAGGGATAT+TGG | 0.333843 | 4_4:+45805862 | Msa0683360:CDS |
GCATAATATAGTGAAGTTAT+TGG | 0.334033 | 4_4:+45806333 | Msa0683360:CDS |
GTGCTAGAGTTCTTTGCATT+AGG | 0.340231 | 4_4:-45809183 | None:intergenic |
ATTAAGGAAATTTGTTGCCT+TGG | 0.340363 | 4_4:-45805990 | None:intergenic |
ACACTCTCAGCTGGAAATAT+TGG | 0.344375 | 4_4:+45809010 | Msa0683360:CDS |
GTATGTTTCAGGGCATGTTT+TGG | 0.345767 | 4_4:+45804136 | Msa0683360:intron |
TCCCAATTTCAGGAAATCTA+AGG | 0.348059 | 4_4:-45809216 | None:intergenic |
GGAAGGTTAGTTGGTGATGC+TGG | 0.349300 | 4_4:+45806217 | Msa0683360:CDS |
TTTGATCATGTTAGCATTGA+CGG | 0.349698 | 4_4:-45809940 | None:intergenic |
TGCGTGCTGTTGACTGTATC+AGG | 0.352665 | 4_4:-45805254 | None:intergenic |
TTGATCGGTGGCAGCTCTAA+TGG | 0.352881 | 4_4:+45806160 | Msa0683360:CDS |
TCACATACTCAATCAGAATC+TGG | 0.354282 | 4_4:+45806519 | Msa0683360:CDS |
AAAACTTCCACACCAGTTAA+TGG | 0.354286 | 4_4:+45805824 | Msa0683360:CDS |
ATCCCTCCACACTGTTCCTT+TGG | 0.359314 | 4_4:-45805857 | None:intergenic |
AGAGAGAAGAAGGTGCTGTT+TGG | 0.359723 | 4_4:-45801482 | None:intergenic |
ATGGTAAAACCTGGCAGAAA+TGG | 0.361766 | 4_4:+45809565 | Msa0683360:three_prime_UTR |
ACCTTAGATTTCCTGAAATT+GGG | 0.364158 | 4_4:+45809215 | Msa0683360:CDS |
TGTCTCCCATTAATTCCATT+TGG | 0.368769 | 4_4:-45805047 | None:intergenic |
TCTCAACTTGGTGATTCATA+TGG | 0.374510 | 4_4:+45809247 | Msa0683360:CDS |
TCGTGCAAATATAGACAATC+AGG | 0.375610 | 4_4:-45804294 | None:intergenic |
AACAGTATGCAACGGCGGTC+AGG | 0.378191 | 4_4:+45804737 | Msa0683360:CDS |
AGAGAGAGAAAGCGCACCTC+AGG | 0.383918 | 4_4:-45801522 | None:intergenic |
CACTTCTTGGGATCATCATT+AGG | 0.385233 | 4_4:-45809638 | None:intergenic |
CTGAGGTGAATTTCTCAAAA+AGG | 0.386624 | 4_4:-45808987 | None:intergenic |
GAAAATACAACTAACCAGAT+AGG | 0.387188 | 4_4:-45808874 | None:intergenic |
TACACACTGCAAGTTTCATT+AGG | 0.393770 | 4_4:-45803398 | None:intergenic |
ATCTTCCAATGATAGAGTTC+GGG | 0.395042 | 4_4:+45806084 | Msa0683360:CDS |
TTTAAAAGTGAGAGAGAAGA+AGG | 0.395171 | 4_4:-45801492 | None:intergenic |
CATAATATAGTGAAGTTATT+GGG | 0.396539 | 4_4:+45806334 | Msa0683360:CDS |
TTAAGGAAATTTGTTGCCTT+GGG | 0.399746 | 4_4:-45805989 | None:intergenic |
TTACATAGTTGGATTGCCTC+TGG | 0.401908 | 4_4:+45803179 | Msa0683360:CDS |
TAAAGAACGAGTTGTCTTCT+CGG | 0.403477 | 4_4:+45805540 | Msa0683360:CDS |
TGCATAGACAACTGAGGATA+AGG | 0.403516 | 4_4:-45809313 | None:intergenic |
TTGTAGATATCTCCAGAGTT+TGG | 0.406565 | 4_4:-45809490 | None:intergenic |
TGATTGAGTATGTGACTCTT+AGG | 0.409553 | 4_4:-45806511 | None:intergenic |
TATCTTCCAATGATAGAGTT+CGG | 0.410594 | 4_4:+45806083 | Msa0683360:CDS |
CGGCTGTATTGGTTGTTATC+GGG | 0.414934 | 4_4:-45805799 | None:intergenic |
TTCTTTAAATTGACAGGCAC+AGG | 0.415228 | 4_4:-45805524 | None:intergenic |
TACCTCCTCCCCTAGATGAT+TGG | 0.415457 | 4_4:+45804768 | Msa0683360:CDS |
AGTTGGATTGCCTCTGGATC+TGG | 0.415860 | 4_4:+45803185 | Msa0683360:CDS |
GTACTCATGACTGGTATATT+GGG | 0.415880 | 4_4:+45809612 | Msa0683360:three_prime_UTR |
TACAGAGAATGAAAACTTGT+TGG | 0.421358 | 4_4:+45810001 | Msa0683360:three_prime_UTR |
TATATTATGCGGTGACGTTA+AGG | 0.425682 | 4_4:-45806320 | None:intergenic |
CCAAGCAGGCTTCCACCTCC+TGG | 0.427554 | 4_4:+45808812 | Msa0683360:CDS |
CAAAGCATTGGAAGGTTAGT+TGG | 0.427898 | 4_4:+45806208 | Msa0683360:CDS |
TATGACAAGGAAAAGATTGT+TGG | 0.433396 | 4_4:+45802811 | Msa0683360:CDS |
TGTCTATATTTGCACGAGGT+TGG | 0.433909 | 4_4:+45804300 | Msa0683360:CDS |
CTTTCCTACCAGTAACTTTG+AGG | 0.434334 | 4_4:+45806585 | Msa0683360:CDS |
TCTTTCATTCCTCAAAAGTT+CGG | 0.434397 | 4_4:-45809416 | None:intergenic |
GCATAGACAACTGAGGATAA+GGG | 0.437992 | 4_4:-45809312 | None:intergenic |
CACCTCCAAATGGAATTAAT+GGG | 0.438030 | 4_4:+45805042 | Msa0683360:CDS |
AACTCGTTCTTTAAATTGAC+AGG | 0.438428 | 4_4:-45805530 | None:intergenic |
CTCTTCCCACCAGTGCTGCT+TGG | 0.439317 | 4_4:+45805075 | Msa0683360:CDS |
AGCCATAAATTACACTTCTT+GGG | 0.439402 | 4_4:-45809650 | None:intergenic |
ATCCTTGTGGTATGAAGTAT+GGG | 0.439572 | 4_4:+45810109 | Msa0683360:three_prime_UTR |
TTTCTATGTTGTGTTAATGT+TGG | 0.441998 | 4_4:+45809540 | Msa0683360:three_prime_UTR |
CCAGGAGGTGGAAGCCTGCT+TGG | 0.445404 | 4_4:-45808812 | None:intergenic |
AATTATTGGTCCAATCATCT+AGG | 0.446433 | 4_4:-45804778 | None:intergenic |
GGCATTTCACTCTTCACCCT+TGG | 0.447702 | 4_4:-45805425 | None:intergenic |
GGTGCAGAGTGGGAATGGTC+TGG | 0.449472 | 4_4:+45809387 | Msa0683360:CDS |
TTCATCCCGAACTCTATCAT+TGG | 0.451494 | 4_4:-45806089 | None:intergenic |
CAGCACAATGTGATGGTTCA+AGG | 0.454403 | 4_4:+45805366 | Msa0683360:CDS |
GGATGTGATAAACCTCCAAC+AGG | 0.456167 | 4_4:-45805209 | None:intergenic |
AGCCCTTGTCTAATGCAGTA+TGG | 0.458876 | 4_4:+45806028 | Msa0683360:CDS |
TACTTCGTGATGAAAGAAAC+AGG | 0.459556 | 4_4:+45806185 | Msa0683360:CDS |
TGTTGTGTTAATGTTGGAAA+TGG | 0.459781 | 4_4:+45809546 | Msa0683360:three_prime_UTR |
TCCTCTCTGTGCCGAAGAGA+TGG | 0.461702 | 4_4:+45802229 | Msa0683360:CDS |
GATATGATGATTCAAAATAT+CGG | 0.463500 | 4_4:+45809464 | Msa0683360:CDS |
GTGTGATGCTGCTATTGATA+AGG | 0.464608 | 4_4:+45806240 | Msa0683360:CDS |
ATATATTAGCATGGACAGTC+TGG | 0.464890 | 4_4:+45805463 | Msa0683360:CDS |
ACAAATCCAATCTTGTCAAA+TGG | 0.464962 | 4_4:+45809343 | Msa0683360:CDS |
ATATGGTATTTCCTCAAGGT+TGG | 0.466637 | 4_4:+45809264 | Msa0683360:CDS |
AGGGAAATCATGAGTGATGA+AGG | 0.467043 | 4_4:+45802194 | Msa0683360:exon |
GTTGGCAAGGGGAGACTTCA+AGG | 0.470588 | 4_4:+45809076 | Msa0683360:CDS |
CCCCGTAACAGCAGTAGAAA+AGG | 0.472096 | 4_4:-45805327 | None:intergenic |
ATACTCACCAGAAAGCTTGT+TGG | 0.472472 | 4_4:-45806647 | None:intergenic |
GTGCAGAGTGGGAATGGTCT+GGG | 0.474197 | 4_4:+45809388 | Msa0683360:CDS |
GAAGGTTAGTTGGTGATGCT+GGG | 0.478133 | 4_4:+45806218 | Msa0683360:CDS |
CTCCCATTAATTCCATTTGG+AGG | 0.480285 | 4_4:-45805044 | None:intergenic |
ATGACAAGGAAAAGATTGTT+GGG | 0.480597 | 4_4:+45802812 | Msa0683360:CDS |
CGACTCTCATCATTCAATAG+TGG | 0.484165 | 4_4:-45805392 | None:intergenic |
ATTATTGGTCCAATCATCTA+GGG | 0.486060 | 4_4:-45804777 | None:intergenic |
ATCCGTCAAATCCATCTCTT+CGG | 0.488115 | 4_4:-45802240 | None:intergenic |
CTTGATTGCAGATCTGTGTA+TGG | 0.488405 | 4_4:+45802716 | Msa0683360:intron |
ACCTGGTGCCAAAACGAGAA+TGG | 0.492492 | 4_4:+45809768 | Msa0683360:three_prime_UTR |
TATTCAGTAGGCAGGCTACT+AGG | 0.493023 | 4_4:-45805713 | None:intergenic |
TATGGTGAACCTTGTACTGC+TGG | 0.494515 | 4_4:+45806046 | Msa0683360:CDS |
TGCCGAAGAGATGGATTTGA+CGG | 0.496389 | 4_4:+45802238 | Msa0683360:CDS |
AAATTCCGTATCACTTCCTC+TGG | 0.496717 | 4_4:-45805653 | None:intergenic |
AAATATCGGATGCCAAACTC+TGG | 0.498643 | 4_4:+45809478 | Msa0683360:CDS |
TTGCCAACTGCCAAAATAGC+AGG | 0.498652 | 4_4:-45809061 | None:intergenic |
ACCTTGCAGATGTGGTTATG+AGG | 0.499084 | 4_4:+45802274 | Msa0683360:CDS |
GCCAAGTCTAAATCTTCTGA+TGG | 0.500557 | 4_4:+45803111 | Msa0683360:CDS |
GAGAAGTTGGGCATAGCAAA+TGG | 0.501740 | 4_4:+45806562 | Msa0683360:CDS |
TGTGACTCTTAGGCTGGTGC+TGG | 0.502905 | 4_4:-45806501 | None:intergenic |
TATGATATGAATTATTATGA+TGG | 0.504383 | 4_4:-45801457 | None:intergenic |
CTGCCACCGATCAATTTCTC+AGG | 0.504791 | 4_4:-45806151 | None:intergenic |
TCAATGTCACGGACGGCAGC+TGG | 0.505325 | 4_4:+45803359 | Msa0683360:CDS |
AAATAAGAAAGACAAACTTC+TGG | 0.505500 | 4_4:-45805965 | None:intergenic |
CCTCATTCCACCCATTCCAT+TGG | 0.506230 | 4_4:-45809366 | None:intergenic |
CATAATGGACATGGCTGAGA+AGG | 0.510522 | 4_4:+45802750 | Msa0683360:CDS |
TTTGAGGAAGCTGAAAGTAT+AGG | 0.512246 | 4_4:+45806601 | Msa0683360:CDS |
TCAAGACATATTCAGTAGGC+AGG | 0.516346 | 4_4:-45805721 | None:intergenic |
CAAACGAAGAGGAATCAATT+CGG | 0.517332 | 4_4:+45803985 | Msa0683360:CDS |
CTCTCATGCGAAGAAAATCC+AGG | 0.520083 | 4_4:-45808830 | None:intergenic |
ACATCATTTCCAGCAGTACA+AGG | 0.520778 | 4_4:-45806055 | None:intergenic |
CAGTTGAAACCTTGCAGATG+TGG | 0.520917 | 4_4:+45802266 | Msa0683360:CDS |
TTGTCAAATGGCCAATGGAA+TGG | 0.521253 | 4_4:+45809355 | Msa0683360:CDS |
TGTGATGCTGCTATTGATAA+GGG | 0.521539 | 4_4:+45806241 | Msa0683360:CDS |
TGCAGATCTGTGTATGGTGT+TGG | 0.522658 | 4_4:+45802722 | Msa0683360:intron |
TGTGATCCTTCTTGAACTTG+AGG | 0.522666 | 4_4:-45805752 | None:intergenic |
CACATACTCAATCAGAATCT+GGG | 0.523481 | 4_4:+45806520 | Msa0683360:CDS |
AAAATCTGTCCATTTCTGCC+AGG | 0.524175 | 4_4:-45809574 | None:intergenic |
AAAATACAACTAACCAGATA+GGG | 0.525817 | 4_4:-45808873 | None:intergenic |
GAAAGAAACAGGCAAAGCAT+TGG | 0.527347 | 4_4:+45806196 | Msa0683360:CDS |
TCACCTCAGACACTCTCAGC+TGG | 0.528005 | 4_4:+45809001 | Msa0683360:CDS |
TCGTCTAGCATGGTATGTAA+TGG | 0.528351 | 4_4:+45806124 | Msa0683360:CDS |
TCATGAGTGATGAAGGAGAA+AGG | 0.528395 | 4_4:+45802201 | Msa0683360:exon |
GCTAACATGATCAAATTAGC+AGG | 0.530607 | 4_4:+45809948 | Msa0683360:three_prime_UTR |
CTCTCAGCTGGAAATATTGG+TGG | 0.531090 | 4_4:+45809013 | Msa0683360:CDS |
GTAAGAAGTTCACCTCCAAA+TGG | 0.531797 | 4_4:+45805032 | Msa0683360:CDS |
TCTCAGCCATGTCCATTATG+TGG | 0.533611 | 4_4:-45802747 | None:intergenic |
TGCGAAGAAAATCCAGGAGG+TGG | 0.533776 | 4_4:-45808824 | None:intergenic |
TGTCAAATGGCCAATGGAAT+GGG | 0.533947 | 4_4:+45809356 | Msa0683360:CDS |
ATTCATATGGTATTTCCTCA+AGG | 0.535059 | 4_4:+45809260 | Msa0683360:CDS |
ACAGTATGCAACGGCGGTCA+GGG | 0.535587 | 4_4:+45804738 | Msa0683360:CDS |
TCCATCAGAAGATTTAGACT+TGG | 0.536050 | 4_4:-45803112 | None:intergenic |
CCGTATCACTTCCTCTGGAC+CGG | 0.537115 | 4_4:-45805648 | None:intergenic |
ATATCTACAACAGAACATTT+GGG | 0.537644 | 4_4:+45809503 | Msa0683360:CDS |
TGCACAAAACAGTCAATCAC+TGG | 0.538022 | 4_4:+45809099 | Msa0683360:CDS |
TTATCGAAATAATTTAATTG+TGG | 0.538393 | 4_4:-45809142 | None:intergenic |
GAGTGGGAATGGTCTGGGTG+TGG | 0.540167 | 4_4:+45809393 | Msa0683360:CDS |
CTGCTTGGAATTGAAAATCC+TGG | 0.541862 | 4_4:-45808797 | None:intergenic |
GCTGGAAATATTGGTGGCAC+AGG | 0.544731 | 4_4:+45809019 | Msa0683360:CDS |
AAGCTTGTTGGAAGAAGCAA+TGG | 0.545728 | 4_4:-45806635 | None:intergenic |
ACAACTGAGGATAAGGGGCT+AGG | 0.546909 | 4_4:-45809306 | None:intergenic |
TTGTCTTTCTTATTTGCCCA+AGG | 0.547862 | 4_4:+45805973 | Msa0683360:CDS |
TGACGTTAAGGAGTCATCCC+AGG | 0.548957 | 4_4:-45806308 | None:intergenic |
CTATGGATGGTACTCATGAC+TGG | 0.549894 | 4_4:+45809603 | Msa0683360:three_prime_UTR |
GTCCAATCATCTAGGGGAGG+AGG | 0.550314 | 4_4:-45804770 | None:intergenic |
ACAGTCAATCACTGGACGTA+CGG | 0.553072 | 4_4:+45809107 | Msa0683360:CDS |
AAATAATTTCCGCTTACACC+AGG | 0.553800 | 4_4:+45804352 | Msa0683360:CDS |
TGAGTATGTGACTCTTAGGC+TGG | 0.553889 | 4_4:-45806507 | None:intergenic |
CAATCTTGTCAAATGGCCAA+TGG | 0.556140 | 4_4:+45809350 | Msa0683360:CDS |
CGGTGTATTCAAAATGTACA+CGG | 0.559138 | 4_4:+45804005 | Msa0683360:CDS |
GGTGGAATGAGGTGCAGAGT+GGG | 0.559395 | 4_4:+45809377 | Msa0683360:CDS |
TCACAAGTTTCAGCTCCACC+AGG | 0.560660 | 4_4:+45808779 | Msa0683360:CDS |
TTACAGTAATAAATCAGAGA+TGG | 0.560906 | 4_4:-45810069 | None:intergenic |
ATGGTGTTGGCACCACATAA+TGG | 0.561273 | 4_4:+45802735 | Msa0683360:CDS |
TTTGGCTTGGACGGCACAGA+GGG | 0.562058 | 4_4:-45805230 | None:intergenic |
TGATACATACCAAGCAGCAC+TGG | 0.568396 | 4_4:-45805084 | None:intergenic |
CAATTTAACCAAGAAAACAT+TGG | 0.569537 | 4_4:-45809695 | None:intergenic |
GTCCAAAGGAACAGTGTGGA+GGG | 0.570249 | 4_4:+45805855 | Msa0683360:CDS |
GGCTATCCTGAGAAATTGAT+CGG | 0.570394 | 4_4:+45806145 | Msa0683360:CDS |
GAGAGAGAAAGCGCACCTCA+GGG | 0.573394 | 4_4:-45801521 | None:intergenic |
CCACAAAATATTGTCATGCA+TGG | 0.573891 | 4_4:+45804161 | Msa0683360:CDS |
TTTGGCTTGGACAGGACAGA+GGG | 0.575802 | 4_4:-45805278 | None:intergenic |
AGTCTAAATCTTCTGATGGA+AGG | 0.576123 | 4_4:+45803115 | Msa0683360:CDS |
GCTTCCTCAAAGTTACTGGT+AGG | 0.576306 | 4_4:-45806589 | None:intergenic |
AATGAGGTGCAGAGTGGGAA+TGG | 0.581533 | 4_4:+45809382 | Msa0683360:CDS |
TTAGTCAAGACATATTCAGT+AGG | 0.584549 | 4_4:-45805725 | None:intergenic |
AAATCTCCTCAAGTTCAAGA+AGG | 0.584893 | 4_4:+45805746 | Msa0683360:CDS |
GCTGAGAAGGATGATACGGA+TGG | 0.584953 | 4_4:+45802763 | Msa0683360:CDS |
GTGTAATTTATGGCTGCAGT+TGG | 0.589802 | 4_4:+45809658 | Msa0683360:three_prime_UTR |
AGTCGAGTTCAACAGATCAC+TGG | 0.589840 | 4_4:+45804707 | Msa0683360:CDS |
GTTAATTGAGGAGAACTCAC+TGG | 0.596913 | 4_4:-45805678 | None:intergenic |
CCTTGTGGTATGAAGTATGG+GGG | 0.597183 | 4_4:+45810111 | Msa0683360:three_prime_UTR |
CATAGACAACTGAGGATAAG+GGG | 0.597857 | 4_4:-45809311 | None:intergenic |
AGTCCAAAGGAACAGTGTGG+AGG | 0.599437 | 4_4:+45805854 | Msa0683360:CDS |
TGTTAAACAATATATTAGCA+TGG | 0.601825 | 4_4:+45805454 | Msa0683360:CDS |
CATGGCTGAGAAGGATGATA+CGG | 0.602355 | 4_4:+45802759 | Msa0683360:CDS |
TTCAAAGTAACAATCAGTCA+AGG | 0.605457 | 4_4:+45806410 | Msa0683360:CDS |
TACATACCAAGCAGCACTGG+TGG | 0.605474 | 4_4:-45805081 | None:intergenic |
CTGTCACTATCTCGTGACAA+TGG | 0.606131 | 4_4:-45805563 | None:intergenic |
AGACAATCAGGGTTGATGCA+AGG | 0.607350 | 4_4:-45804282 | None:intergenic |
CCAATGGAATGGGTGGAATG+AGG | 0.609376 | 4_4:+45809366 | Msa0683360:CDS |
CCGATAACAACCAATACAGC+CGG | 0.610345 | 4_4:+45805800 | Msa0683360:CDS |
GGGTGGAATGAGGTGCAGAG+TGG | 0.611848 | 4_4:+45809376 | Msa0683360:CDS |
CCGGTCCAGAGGAAGTGATA+CGG | 0.615172 | 4_4:+45805648 | Msa0683360:CDS |
ATCCCAGGGATCAAAATCGA+GGG | 0.615475 | 4_4:-45806293 | None:intergenic |
TATTACTTATTCAAACGAAG+AGG | 0.619236 | 4_4:+45803974 | Msa0683360:CDS |
TCCTTGTGGTATGAAGTATG+GGG | 0.619656 | 4_4:+45810110 | Msa0683360:three_prime_UTR |
GGAAAAGATTGTTGGGACAG+CGG | 0.620399 | 4_4:+45802819 | Msa0683360:CDS |
TCTTCATCTGCCAGATCCAG+AGG | 0.620516 | 4_4:-45803195 | None:intergenic |
ATGTTGGAAATGGTAAAACC+TGG | 0.621999 | 4_4:+45809556 | Msa0683360:three_prime_UTR |
CTGAGAAGGATGATACGGAT+GGG | 0.623043 | 4_4:+45802764 | Msa0683360:CDS |
TAAAAGTGTCTTAAACTACC+TGG | 0.624341 | 4_4:+45809751 | Msa0683360:three_prime_UTR |
TATGTGTGTTAGGGGCACAC+AGG | 0.625185 | 4_4:+45805169 | Msa0683360:intron |
GGACAGCGGCAAAATGTGAA+AGG | 0.625499 | 4_4:+45802833 | Msa0683360:CDS |
GCTTCTGCAGCACAATGTGA+TGG | 0.625739 | 4_4:+45805359 | Msa0683360:CDS |
GACGTTAAGGAGTCATCCCA+GGG | 0.627813 | 4_4:-45806307 | None:intergenic |
GAAACAGGCAAAGCATTGGA+AGG | 0.627985 | 4_4:+45806200 | Msa0683360:CDS |
ACCTCATAACCACATCTGCA+AGG | 0.628226 | 4_4:-45802275 | None:intergenic |
ATGTGATAAACCTCCAACAG+GGG | 0.629673 | 4_4:-45805207 | None:intergenic |
TTTCCAGCTGAGAGTGTCTG+AGG | 0.629927 | 4_4:-45809004 | None:intergenic |
AGAACATTACCTGGTGTAAG+CGG | 0.633037 | 4_4:-45804361 | None:intergenic |
TCATGCATGGCTCCGAAATG+CGG | 0.633847 | 4_4:+45804174 | Msa0683360:CDS |
TCTTAAAAGTGTCAATGTCA+CGG | 0.635277 | 4_4:+45803348 | Msa0683360:CDS |
TCACCATACTGCATTAGACA+AGG | 0.635869 | 4_4:-45806031 | None:intergenic |
AATAACTTCACTATATTATG+CGG | 0.636773 | 4_4:-45806331 | None:intergenic |
CATCCCAGGGATCAAAATCG+AGG | 0.639851 | 4_4:-45806294 | None:intergenic |
CGTGCAAATATAGACAATCA+GGG | 0.641408 | 4_4:-45804293 | None:intergenic |
CAAATGGCCAATGGAATGGG+TGG | 0.641492 | 4_4:+45809359 | Msa0683360:CDS |
TCATAAGGAGAACGACACGC+AGG | 0.644622 | 4_4:-45802793 | None:intergenic |
GCAATCCAACTATGTAAACA+AGG | 0.648676 | 4_4:-45803173 | None:intergenic |
AAAAGTGTCAATGTCACGGA+CGG | 0.649581 | 4_4:+45803352 | Msa0683360:CDS |
AAGAAGATGAAACTGTGAGG+AGG | 0.651594 | 4_4:-45801615 | None:intergenic |
GTGTCACAAACAGTATGCAA+CGG | 0.652666 | 4_4:+45804729 | Msa0683360:CDS |
CATAAGGAGAACGACACGCA+GGG | 0.654435 | 4_4:-45802792 | None:intergenic |
GTGTCGTTCTCCTTATGACA+AGG | 0.656317 | 4_4:+45802798 | Msa0683360:CDS |
GATGTGATAAACCTCCAACA+GGG | 0.658255 | 4_4:-45805208 | None:intergenic |
CTTGGAATTGAAAATCCTGG+TGG | 0.661159 | 4_4:-45808794 | None:intergenic |
ACATACCAAGCAGCACTGGT+GGG | 0.662474 | 4_4:-45805080 | None:intergenic |
GAGTCGTAATACAATACCAA+GGG | 0.664587 | 4_4:+45805409 | Msa0683360:CDS |
AGAGTCGTAATACAATACCA+AGG | 0.667565 | 4_4:+45805408 | Msa0683360:CDS |
TGTGATAAACCTCCAACAGG+GGG | 0.672431 | 4_4:-45805206 | None:intergenic |
TTGGTCCAATCATCTAGGGG+AGG | 0.674713 | 4_4:-45804773 | None:intergenic |
TTGAGACTGATCCAACCTTG+AGG | 0.676768 | 4_4:-45809275 | None:intergenic |
TTTAGTCCAAAGGAACAGTG+TGG | 0.681841 | 4_4:+45805851 | Msa0683360:CDS |
TCCATCTCTTCGGCACAGAG+AGG | 0.687071 | 4_4:-45802230 | None:intergenic |
TGATTGTCTATATTTGCACG+AGG | 0.691640 | 4_4:+45804296 | Msa0683360:CDS |
CACCATACTGCATTAGACAA+GGG | 0.693804 | 4_4:-45806030 | None:intergenic |
TGCTGGCTGACAGTATAAGA+CGG | 0.698728 | 4_4:-45806484 | None:intergenic |
TTGGCACCACATAATGGACA+TGG | 0.703228 | 4_4:+45802741 | Msa0683360:CDS |
TTGTCACGAGATAGTGACAG+AGG | 0.704816 | 4_4:+45805566 | Msa0683360:CDS |
TTATTGGTCCAATCATCTAG+GGG | 0.707559 | 4_4:-45804776 | None:intergenic |
CACAATGTGATGGTTCAAGG+AGG | 0.714959 | 4_4:+45805369 | Msa0683360:CDS |
TATCCTGAGAAATTGATCGG+TGG | 0.715354 | 4_4:+45806148 | Msa0683360:CDS |
GACTGCTGCATAGACAACTG+AGG | 0.729537 | 4_4:-45809319 | None:intergenic |
GAGAAGAAGATGAAACTGTG+AGG | 0.734883 | 4_4:-45801618 | None:intergenic |
TCACAAACAGTATGCAACGG+CGG | 0.734915 | 4_4:+45804732 | Msa0683360:CDS |
TCATGCGAAGAAAATCCAGG+AGG | 0.788800 | 4_4:-45808827 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATATTTTTAATTTTTTTTT+TGG | + | chr4_4:45801847-45801866 | Msa0683360:intron | 0.0% |
!!! | TTTTGAATTTTTTGTTAAAT+CGG | + | chr4_4:45801929-45801948 | Msa0683360:intron | 10.0% |
!!! | ATTTTTAAGTTATTTATACA+AGG | + | chr4_4:45802978-45802997 | Msa0683360:intron | 10.0% |
!!! | TTTTTAAGTTATTTATACAA+GGG | + | chr4_4:45802979-45802998 | Msa0683360:intron | 10.0% |
!!! | TAATTTTTTTTGTTTGTTTT+TGG | + | chr4_4:45804110-45804129 | Msa0683360:intron | 10.0% |
!! | AAAATTAGTGTATATTTATT+TGG | - | chr4_4:45804671-45804690 | None:intergenic | 10.0% |
!! | TAGAAATTAAACATAATATT+TGG | + | chr4_4:45807621-45807640 | Msa0683360:intron | 10.0% |
!!! | ATTTTTTTTTGTATTTATGT+TGG | + | chr4_4:45808912-45808931 | Msa0683360:intron | 10.0% |
!! | ATATATTCTGAATCAAATTA+GGG | - | chr4_4:45801700-45801719 | None:intergenic | 15.0% |
!! | ATTACTTATTAATCTGATAT+TGG | + | chr4_4:45801976-45801995 | Msa0683360:intron | 15.0% |
!!! | CAATTTTCTCAAATTATTAT+TGG | + | chr4_4:45802472-45802491 | Msa0683360:intron | 15.0% |
!! | AAGAGAAATACAATATAAAT+AGG | - | chr4_4:45803015-45803034 | None:intergenic | 15.0% |
!! | ATATTAAATGTATTACACAA+TGG | - | chr4_4:45803910-45803929 | None:intergenic | 15.0% |
!! | TAGATATATTCAACATTAAA+GGG | - | chr4_4:45805127-45805146 | None:intergenic | 15.0% |
!! | TTAGATATATTCAACATTAA+AGG | - | chr4_4:45805128-45805147 | None:intergenic | 15.0% |
!! | ATATATTGTTTAACAGATTT+CGG | - | chr4_4:45805449-45805468 | None:intergenic | 15.0% |
!! | AATACAAAAAAAAATGTGAA+AGG | - | chr4_4:45808907-45808926 | None:intergenic | 15.0% |
!! | TTATCGAAATAATTTAATTG+TGG | - | chr4_4:45809145-45809164 | None:intergenic | 15.0% |
!!! | TTTAAAATTGTTTTCATACT+AGG | + | chr4_4:45809806-45809825 | Msa0683360:three_prime_UTR | 15.0% |
!! | CATATATTCTGAATCAAATT+AGG | - | chr4_4:45801701-45801720 | None:intergenic | 20.0% |
!! | GTAATGCATTATAGAAAAAT+AGG | - | chr4_4:45801961-45801980 | None:intergenic | 20.0% |
!!! | TTATTATGAACTTGTGATTT+TGG | + | chr4_4:45802055-45802074 | Msa0683360:intron | 20.0% |
!!! | TATTATGAACTTGTGATTTT+GGG | + | chr4_4:45802056-45802075 | Msa0683360:intron | 20.0% |
!! | ATTCTATCAATGCAATTATT+TGG | + | chr4_4:45802301-45802320 | Msa0683360:intron | 20.0% |
!! | ACAATTTACATGGTTAATTT+AGG | + | chr4_4:45802606-45802625 | Msa0683360:intron | 20.0% |
!!! | GTTAAAAGTGTAATCAATTA+AGG | - | chr4_4:45804239-45804258 | None:intergenic | 20.0% |
!! | AAATAAATAAGAACATTACC+TGG | - | chr4_4:45804373-45804392 | None:intergenic | 20.0% |
!! | TATACAAAATTCTTGCAAAT+AGG | + | chr4_4:45804450-45804469 | Msa0683360:intron | 20.0% |
!! | TGTTAAACAATATATTAGCA+TGG | + | chr4_4:45805454-45805473 | Msa0683360:CDS | 20.0% |
!!! | TTTTCTATCAATGTTAATTG+AGG | - | chr4_4:45805693-45805712 | None:intergenic | 20.0% |
!!! | TAGAGAGTTTTGAATTATTA+AGG | - | chr4_4:45806009-45806028 | None:intergenic | 20.0% |
!! | AATAACTTCACTATATTATG+CGG | - | chr4_4:45806334-45806353 | None:intergenic | 20.0% |
!! | CATAATATAGTGAAGTTATT+GGG | + | chr4_4:45806334-45806353 | Msa0683360:CDS | 20.0% |
!!! | CTAGAATTAGATGTTTTTAA+AGG | - | chr4_4:45806385-45806404 | None:intergenic | 20.0% |
!!! | CTTTAAAAACATCTAATTCT+AGG | + | chr4_4:45806383-45806402 | Msa0683360:CDS | 20.0% |
!!! | CATAATTTTCATCCATATTT+TGG | + | chr4_4:45806834-45806853 | Msa0683360:intron | 20.0% |
!! | TACAAACAAAAAAATGTACA+TGG | - | chr4_4:45807073-45807092 | None:intergenic | 20.0% |
!!! | ATTATGTTTAATTTCTACCT+GGG | - | chr4_4:45807618-45807637 | None:intergenic | 20.0% |
!!! | TATTATGTTTAATTTCTACC+TGG | - | chr4_4:45807619-45807638 | None:intergenic | 20.0% |
!! | AAAAAAAATACCTCTACTTA+TGG | + | chr4_4:45807835-45807854 | Msa0683360:intron | 20.0% |
!! | AAATATGAAAATTTGATTCC+TGG | + | chr4_4:45808019-45808038 | Msa0683360:intron | 20.0% |
!! | AATATGAAAATTTGATTCCT+GGG | + | chr4_4:45808020-45808039 | Msa0683360:intron | 20.0% |
!!! | TATTTTTCAAAGAAAGTGTT+TGG | + | chr4_4:45808043-45808062 | Msa0683360:intron | 20.0% |
!! | ATTATTAAACTGCTTTCTTT+CGG | + | chr4_4:45808644-45808663 | Msa0683360:intron | 20.0% |
!! | GATATGATGATTCAAAATAT+CGG | + | chr4_4:45809464-45809483 | Msa0683360:CDS | 20.0% |
!! | TTGGTTAAATTGGATTAATA+TGG | + | chr4_4:45809706-45809725 | Msa0683360:three_prime_UTR | 20.0% |
!! | ATTATGAACTTGTGATTTTG+GGG | + | chr4_4:45802057-45802076 | Msa0683360:intron | 25.0% |
!! | TTTTGTTCAGTTTTTGTTGA+GGG | + | chr4_4:45802175-45802194 | Msa0683360:intron | 25.0% |
! | TAATACCATATGCAAAAACA+CGG | - | chr4_4:45802358-45802377 | None:intergenic | 25.0% |
!! | GAGTCTTTTTACAATTTACA+TGG | + | chr4_4:45802596-45802615 | Msa0683360:intron | 25.0% |
! | CTGTTAAATTTCACATAATC+AGG | - | chr4_4:45802654-45802673 | None:intergenic | 25.0% |
! | GATTATGTGAAATTTAACAG+AGG | + | chr4_4:45802654-45802673 | Msa0683360:intron | 25.0% |
!!! | TGGCAATTTTAAAAATTTCC+AGG | - | chr4_4:45802888-45802907 | None:intergenic | 25.0% |
! | TGAAATGAATTTGGAGAAAA+AGG | + | chr4_4:45803074-45803093 | Msa0683360:CDS | 25.0% |
! | AAACTGAAATAATCAAAGAG+TGG | - | chr4_4:45803240-45803259 | None:intergenic | 25.0% |
! | TTGTGGTAAATTAGATAGTT+AGG | + | chr4_4:45803523-45803542 | Msa0683360:intron | 25.0% |
!! | TGTGTTTGAAATATATTTGC+TGG | - | chr4_4:45803590-45803609 | None:intergenic | 25.0% |
!! | TCAAACACATTTTTGTAACT+TGG | + | chr4_4:45803601-45803620 | Msa0683360:intron | 25.0% |
!! | TCAAAGACATTTTTGTAACT+TGG | + | chr4_4:45803758-45803777 | Msa0683360:intron | 25.0% |
! | TATTACTTATTCAAACGAAG+AGG | + | chr4_4:45803974-45803993 | Msa0683360:CDS | 25.0% |
! | AAAATTAATAAGCAAGACCA+GGG | - | chr4_4:45804097-45804116 | None:intergenic | 25.0% |
! | AAAAATTAATAAGCAAGACC+AGG | - | chr4_4:45804098-45804117 | None:intergenic | 25.0% |
!! | TTTTTGGATTGTATGTTTCA+GGG | + | chr4_4:45804126-45804145 | Msa0683360:intron | 25.0% |
!! | AGGCAATGTTCTTATAATTT+TGG | + | chr4_4:45804404-45804423 | Msa0683360:intron | 25.0% |
! | TTAAAACCATGTTCTGATTT+AGG | + | chr4_4:45804589-45804608 | Msa0683360:intron | 25.0% |
! | AGCAATTAAAATGTGCAAAA+GGG | - | chr4_4:45804632-45804651 | None:intergenic | 25.0% |
! | AAGCAATTAAAATGTGCAAA+AGG | - | chr4_4:45804633-45804652 | None:intergenic | 25.0% |
!!! | GATGTGTTTCATTTTAATGA+TGG | + | chr4_4:45804989-45805008 | Msa0683360:intron | 25.0% |
! | GAATATATCTAACGAAGTTA+TGG | + | chr4_4:45805136-45805155 | Msa0683360:intron | 25.0% |
! | TTAAATGCTACTAACATTAC+TGG | + | chr4_4:45805611-45805630 | Msa0683360:CDS | 25.0% |
! | AAATAAGAAAGACAAACTTC+TGG | - | chr4_4:45805968-45805987 | None:intergenic | 25.0% |
! | GCATAATATAGTGAAGTTAT+TGG | + | chr4_4:45806333-45806352 | Msa0683360:CDS | 25.0% |
!!! | TTAGATGTTTTTAAAGGACA+AGG | - | chr4_4:45806379-45806398 | None:intergenic | 25.0% |
!! | GAATCTCAAATTCAATCTTT+TGG | + | chr4_4:45806454-45806473 | Msa0683360:CDS | 25.0% |
!! | AGATTTTTATATGGAGAAGT+TGG | + | chr4_4:45806549-45806568 | Msa0683360:CDS | 25.0% |
!! | GATTTTTATATGGAGAAGTT+GGG | + | chr4_4:45806550-45806569 | Msa0683360:CDS | 25.0% |
! | AAATGTCAAAATTTCAGCAT+AGG | - | chr4_4:45806748-45806767 | None:intergenic | 25.0% |
!!! | TTTCAGTAATTGATTTTGTG+TGG | + | chr4_4:45806765-45806784 | Msa0683360:intron | 25.0% |
! | GAAAAAGCAAAACCAAAATA+TGG | - | chr4_4:45806849-45806868 | None:intergenic | 25.0% |
! | TGTAGCATCTATTATGTATA+TGG | - | chr4_4:45807101-45807120 | None:intergenic | 25.0% |
! | ATAGATGCTACAAAGATTAA+TGG | + | chr4_4:45807109-45807128 | Msa0683360:intron | 25.0% |
! | ACATAAAAAATGTAGGAAGT+TGG | - | chr4_4:45807474-45807493 | None:intergenic | 25.0% |
!!! | ACTTCCTACATTTTTTATGT+TGG | + | chr4_4:45807474-45807493 | Msa0683360:intron | 25.0% |
! | AGAACCAACATAAAAAATGT+AGG | - | chr4_4:45807481-45807500 | None:intergenic | 25.0% |
!!! | TAGTTTTAGTAGAACTAAGT+CGG | + | chr4_4:45807530-45807549 | Msa0683360:intron | 25.0% |
! | TAAATGAAAAGCTAGAACAA+AGG | + | chr4_4:45807555-45807574 | Msa0683360:intron | 25.0% |
! | GTACATAATTTGACATTTCT+AGG | + | chr4_4:45808065-45808084 | Msa0683360:intron | 25.0% |
!! | TTTGACATTTCTAGGAAAAT+TGG | + | chr4_4:45808073-45808092 | Msa0683360:intron | 25.0% |
! | ATAATTAAAACGCCATCATA+GGG | + | chr4_4:45808364-45808383 | Msa0683360:intron | 25.0% |
! | TTATTAAACTGCTTTCTTTC+GGG | + | chr4_4:45808645-45808664 | Msa0683360:intron | 25.0% |
! | AGTGCAACTCATAAATTATA+GGG | - | chr4_4:45808683-45808702 | None:intergenic | 25.0% |
! | TGTCAAACATAGCAAAATAA+AGG | - | chr4_4:45808747-45808766 | None:intergenic | 25.0% |
! | AAAATACAACTAACCAGATA+GGG | - | chr4_4:45808876-45808895 | None:intergenic | 25.0% |
!! | ATTTTGAATCATCATATCCT+GGG | - | chr4_4:45809462-45809481 | None:intergenic | 25.0% |
!!! | TATTTTGAATCATCATATCC+TGG | - | chr4_4:45809463-45809482 | None:intergenic | 25.0% |
! | ATATCTACAACAGAACATTT+GGG | + | chr4_4:45809503-45809522 | Msa0683360:CDS | 25.0% |
! | TTTCTATGTTGTGTTAATGT+TGG | + | chr4_4:45809540-45809559 | Msa0683360:three_prime_UTR | 25.0% |
! | CAATTTAACCAAGAAAACAT+TGG | - | chr4_4:45809698-45809717 | None:intergenic | 25.0% |
!! | CAATGTTTTCTTGGTTAAAT+TGG | + | chr4_4:45809696-45809715 | Msa0683360:three_prime_UTR | 25.0% |
!! | ATTGTTTTCATACTAGGTTT+TGG | + | chr4_4:45809812-45809831 | Msa0683360:three_prime_UTR | 25.0% |
! | TTACAGTAATAAATCAGAGA+TGG | - | chr4_4:45810072-45810091 | None:intergenic | 25.0% |
!!! | TTTTTGTTTTACTATCCTTG+TGG | + | chr4_4:45810096-45810115 | Msa0683360:three_prime_UTR | 25.0% |
TTTAAAAGTGAGAGAGAAGA+AGG | - | chr4_4:45801495-45801514 | None:intergenic | 30.0% | |
AGAAATTAGGGTTAGAGATT+AGG | - | chr4_4:45801670-45801689 | None:intergenic | 30.0% | |
ATTAAAATACGACGAACCTA+TGG | - | chr4_4:45801905-45801924 | None:intergenic | 30.0% | |
! | AGTAGTTTAGAGTTAGTAAC+TGG | + | chr4_4:45802083-45802102 | Msa0683360:intron | 30.0% |
!! | GTTTTGTTCAGTTTTTGTTG+AGG | + | chr4_4:45802174-45802193 | Msa0683360:intron | 30.0% |
!! | TGGAGTAGCTAATTATTTTG+TGG | + | chr4_4:45802544-45802563 | Msa0683360:intron | 30.0% |
! | ACAATCTTTTCCTTGTCATA+AGG | - | chr4_4:45802811-45802830 | None:intergenic | 30.0% |
TATGACAAGGAAAAGATTGT+TGG | + | chr4_4:45802811-45802830 | Msa0683360:CDS | 30.0% | |
ATGACAAGGAAAAGATTGTT+GGG | + | chr4_4:45802812-45802831 | Msa0683360:CDS | 30.0% | |
ACAGTATATTTATGTAGTCC+TGG | + | chr4_4:45802867-45802886 | Msa0683360:intron | 30.0% | |
ACCTTCAAACATAAAAGCTT+TGG | - | chr4_4:45802908-45802927 | None:intergenic | 30.0% | |
ACTGCTGAATGAAATGAATT+TGG | + | chr4_4:45803065-45803084 | Msa0683360:CDS | 30.0% | |
! | GTTTTACCTCGTTTTCTATT+CGG | + | chr4_4:45803256-45803275 | Msa0683360:intron | 30.0% |
!! | TCTTAAAAGTGTCAATGTCA+CGG | + | chr4_4:45803348-45803367 | Msa0683360:CDS | 30.0% |
! | CATTATCGTTTTCTGTTTGT+TGG | + | chr4_4:45803444-45803463 | Msa0683360:intron | 30.0% |
! | TTTCTGTTTGTTGGCTATAT+AGG | + | chr4_4:45803453-45803472 | Msa0683360:intron | 30.0% |
!! | TTTTCCTTTTGTTGTCATTG+TGG | + | chr4_4:45803506-45803525 | Msa0683360:intron | 30.0% |
TTTACCACAATGACAACAAA+AGG | - | chr4_4:45803513-45803532 | None:intergenic | 30.0% | |
GGAGTCTGTATATATAGTTT+CGG | + | chr4_4:45803544-45803563 | Msa0683360:intron | 30.0% | |
GAGTCTGTATATATAGTTTC+GGG | + | chr4_4:45803545-45803564 | Msa0683360:intron | 30.0% | |
AGTCTGTATATATAGTTTCG+GGG | + | chr4_4:45803546-45803565 | Msa0683360:intron | 30.0% | |
TGTAACTTGGTTAAAAGAGA+AGG | + | chr4_4:45803614-45803633 | Msa0683360:intron | 30.0% | |
TCTCATGCTATGTAAAGAAA+TGG | - | chr4_4:45803647-45803666 | None:intergenic | 30.0% | |
TGAGATTAAAGAAACTGCTA+AGG | + | chr4_4:45803662-45803681 | Msa0683360:intron | 30.0% | |
!! | TGTCTTTGAAGTATATTTGC+TGG | - | chr4_4:45803747-45803766 | None:intergenic | 30.0% |
TGTAACTTGGTTAAAAGAGA+AGG | + | chr4_4:45803614-45803633 | Msa0683360:intron | 30.0% | |
! | TGTCATTTCTTTACATAGCA+CGG | + | chr4_4:45803799-45803818 | Msa0683360:intron | 30.0% |
AATGCTACAGTTTCTAATCA+AGG | + | chr4_4:45803937-45803956 | Msa0683360:intron | 30.0% | |
!! | AAATGTACACGGATTTGTTT+TGG | + | chr4_4:45804016-45804035 | Msa0683360:CDS | 30.0% |
!! | GTTTTTGGATTGTATGTTTC+AGG | + | chr4_4:45804125-45804144 | Msa0683360:intron | 30.0% |
! | CTAATTTTCATACCGCATTT+CGG | - | chr4_4:45804189-45804208 | None:intergenic | 30.0% |
AATGCGGTATGAAAATTAGT+AGG | + | chr4_4:45804190-45804209 | Msa0683360:intron | 30.0% | |
TATTTATTTCCGCTTACACT+AGG | + | chr4_4:45804384-45804403 | Msa0683360:intron | 30.0% | |
GCAATTAAAATGTGCAAAAG+GGG | - | chr4_4:45804631-45804650 | None:intergenic | 30.0% | |
ATTATTGGTCCAATCATCTA+GGG | - | chr4_4:45804780-45804799 | None:intergenic | 30.0% | |
AATTATTGGTCCAATCATCT+AGG | - | chr4_4:45804781-45804800 | None:intergenic | 30.0% | |
GAAAATAGAGGGACTATATA+GGG | - | chr4_4:45804858-45804877 | None:intergenic | 30.0% | |
! | CTATATAGTCCCTCTATTTT+CGG | + | chr4_4:45804857-45804876 | Msa0683360:intron | 30.0% |
TTCCAATGTTTATGTGTGTT+AGG | + | chr4_4:45805159-45805178 | Msa0683360:intron | 30.0% | |
TCCAATGTTTATGTGTGTTA+GGG | + | chr4_4:45805160-45805179 | Msa0683360:intron | 30.0% | |
AACTCGTTCTTTAAATTGAC+AGG | - | chr4_4:45805533-45805552 | None:intergenic | 30.0% | |
TTAGTCAAGACATATTCAGT+AGG | - | chr4_4:45805728-45805747 | None:intergenic | 30.0% | |
!! | TTTTGAGAATCAAAGACTCA+AGG | + | chr4_4:45805940-45805959 | Msa0683360:CDS | 30.0% |
!! | TTAAGGAAATTTGTTGCCTT+GGG | - | chr4_4:45805992-45806011 | None:intergenic | 30.0% |
!! | ATTAAGGAAATTTGTTGCCT+TGG | - | chr4_4:45805993-45806012 | None:intergenic | 30.0% |
TATCTTCCAATGATAGAGTT+CGG | + | chr4_4:45806083-45806102 | Msa0683360:CDS | 30.0% | |
! | TATTTTACATTCGTCTAGCA+TGG | + | chr4_4:45806114-45806133 | Msa0683360:CDS | 30.0% |
TTCAAAGTAACAATCAGTCA+AGG | + | chr4_4:45806410-45806429 | Msa0683360:CDS | 30.0% | |
! | GGGAGAAAGAGATTTTTATA+TGG | + | chr4_4:45806540-45806559 | Msa0683360:CDS | 30.0% |
! | ATAGATTTTACTCAACCCTA+TGG | - | chr4_4:45806797-45806816 | None:intergenic | 30.0% |
CAAACCTATAACAGAAAATC+TGG | + | chr4_4:45807014-45807033 | Msa0683360:intron | 30.0% | |
! | TCAACCAGATTTTCTGTTAT+AGG | - | chr4_4:45807021-45807040 | None:intergenic | 30.0% |
TGATTTAATACCAGAGAGAT+CGG | + | chr4_4:45807038-45807057 | Msa0683360:intron | 30.0% | |
ATTCAATGATGATTGCTCTA+CGG | + | chr4_4:45807266-45807285 | Msa0683360:intron | 30.0% | |
! | TTTTTACTCACAAAACCTAC+TGG | - | chr4_4:45807342-45807361 | None:intergenic | 30.0% |
AAAATACCCTACTAGAAGAT+AGG | + | chr4_4:45807359-45807378 | Msa0683360:intron | 30.0% | |
AAATACCCTACTAGAAGATA+GGG | + | chr4_4:45807360-45807379 | Msa0683360:intron | 30.0% | |
!!! | ACGAAGGATTTTTGTTTTTG+CGG | + | chr4_4:45807503-45807522 | Msa0683360:intron | 30.0% |
!! | AGTTTTAGTAGAACTAAGTC+GGG | + | chr4_4:45807531-45807550 | Msa0683360:intron | 30.0% |
TTGGAATGTAAGTTTAGCAA+AGG | + | chr4_4:45807640-45807659 | Msa0683360:intron | 30.0% | |
! | TACTTGAAATGAGACACTTT+TGG | - | chr4_4:45807711-45807730 | None:intergenic | 30.0% |
ACAAAGCAATGGAGAAATAA+AGG | + | chr4_4:45807746-45807765 | Msa0683360:intron | 30.0% | |
CAAAGCAATGGAGAAATAAA+GGG | + | chr4_4:45807747-45807766 | Msa0683360:intron | 30.0% | |
TTTATCACAAATCACACTCA+AGG | - | chr4_4:45807818-45807837 | None:intergenic | 30.0% | |
ATAAAGCCTATAATGTTGCA+TGG | + | chr4_4:45807877-45807896 | Msa0683360:intron | 30.0% | |
TCAGGCAGTAAAATAAACTA+AGG | + | chr4_4:45807924-45807943 | Msa0683360:intron | 30.0% | |
CAGGCAGTAAAATAAACTAA+GGG | + | chr4_4:45807925-45807944 | Msa0683360:intron | 30.0% | |
AGGCAGTAAAATAAACTAAG+GGG | + | chr4_4:45807926-45807945 | Msa0683360:intron | 30.0% | |
! | CTCTGTTACAAATTTTTACC+AGG | + | chr4_4:45807959-45807978 | Msa0683360:intron | 30.0% |
TCATATTTACATTCCTGAGT+AGG | - | chr4_4:45808007-45808026 | None:intergenic | 30.0% | |
! | ACTTTCTTTGAAAAATACCC+AGG | - | chr4_4:45808040-45808059 | None:intergenic | 30.0% |
TCTCAACCTTATAACAAACA+TGG | + | chr4_4:45808227-45808246 | Msa0683360:intron | 30.0% | |
CTCAACCTTATAACAAACAT+GGG | + | chr4_4:45808228-45808247 | Msa0683360:intron | 30.0% | |
!! | CTATACCCATGTTTGTTATA+AGG | - | chr4_4:45808236-45808255 | None:intergenic | 30.0% |
ATGAGAATGTTAACAAACTG+TGG | + | chr4_4:45808317-45808336 | Msa0683360:intron | 30.0% | |
!!! | TGGCGTTTTAATTATGGAAA+AGG | - | chr4_4:45808359-45808378 | None:intergenic | 30.0% |
!!! | CTATGATGGCGTTTTAATTA+TGG | - | chr4_4:45808365-45808384 | None:intergenic | 30.0% |
CATAATTAAAACGCCATCAT+AGG | + | chr4_4:45808363-45808382 | Msa0683360:intron | 30.0% | |
!!! | GTTGAAGAGCTTTTAAGTTA+TGG | + | chr4_4:45808465-45808484 | Msa0683360:intron | 30.0% |
TCAGATATGTAGTGTGTTAT+TGG | + | chr4_4:45808507-45808526 | Msa0683360:intron | 30.0% | |
CAACTCATAAATTATAGGGA+AGG | - | chr4_4:45808679-45808698 | None:intergenic | 30.0% | |
CAGTGCAACTCATAAATTAT+AGG | - | chr4_4:45808684-45808703 | None:intergenic | 30.0% | |
GAAAATACAACTAACCAGAT+AGG | - | chr4_4:45808877-45808896 | None:intergenic | 30.0% | |
! | ATAGTTGTTATCCTTTTGAC+AGG | + | chr4_4:45808941-45808960 | Msa0683360:intron | 30.0% |
GTAATGAATTACCTGTCAAA+AGG | - | chr4_4:45808955-45808974 | None:intergenic | 30.0% | |
!! | ATTTATGGATCCTGCTATTT+TGG | + | chr4_4:45809051-45809070 | Msa0683360:CDS | 30.0% |
AACCTTAGATTTCCTGAAAT+TGG | + | chr4_4:45809214-45809233 | Msa0683360:CDS | 30.0% | |
ACCTTAGATTTCCTGAAATT+GGG | + | chr4_4:45809215-45809234 | Msa0683360:CDS | 30.0% | |
!! | GAAAAAGTATTCCCAATTTC+AGG | - | chr4_4:45809229-45809248 | None:intergenic | 30.0% |
ATTCATATGGTATTTCCTCA+AGG | + | chr4_4:45809260-45809279 | Msa0683360:CDS | 30.0% | |
ACAAATCCAATCTTGTCAAA+TGG | + | chr4_4:45809343-45809362 | Msa0683360:CDS | 30.0% | |
TCTTTCATTCCTCAAAAGTT+CGG | - | chr4_4:45809419-45809438 | None:intergenic | 30.0% | |
GATATCTACAACAGAACATT+TGG | + | chr4_4:45809502-45809521 | Msa0683360:CDS | 30.0% | |
TGTTGTGTTAATGTTGGAAA+TGG | + | chr4_4:45809546-45809565 | Msa0683360:three_prime_UTR | 30.0% | |
! | ATCCCAAGAAGTGTAATTTA+TGG | + | chr4_4:45809648-45809667 | Msa0683360:three_prime_UTR | 30.0% |
AGCCATAAATTACACTTCTT+GGG | - | chr4_4:45809653-45809672 | None:intergenic | 30.0% | |
! | GTTAACTTCCAATGTTTTCT+TGG | + | chr4_4:45809687-45809706 | Msa0683360:three_prime_UTR | 30.0% |
!! | TAAAAGTGTCTTAAACTACC+TGG | + | chr4_4:45809751-45809770 | Msa0683360:three_prime_UTR | 30.0% |
!!! | CATTTTTTCCATTCTCGTTT+TGG | - | chr4_4:45809779-45809798 | None:intergenic | 30.0% |
! | TTTGATCATGTTAGCATTGA+CGG | - | chr4_4:45809943-45809962 | None:intergenic | 30.0% |
TACAGAGAATGAAAACTTGT+TGG | + | chr4_4:45810001-45810020 | Msa0683360:three_prime_UTR | 30.0% | |
!! | ACTTTTAAAAAGACACCCTG+AGG | + | chr4_4:45801506-45801525 | Msa0683360:five_prime_UTR | 35.0% |
TAGGGATCGAAGAGAAATTA+GGG | - | chr4_4:45801682-45801701 | None:intergenic | 35.0% | |
TTAGGGATCGAAGAGAAATT+AGG | - | chr4_4:45801683-45801702 | None:intergenic | 35.0% | |
TTTCCGTTCTGTTATTGTTG+CGG | + | chr4_4:45801774-45801793 | Msa0683360:intron | 35.0% | |
ATTCCGCAACAATAACAGAA+CGG | - | chr4_4:45801780-45801799 | None:intergenic | 35.0% | |
TTCTGTTATTGTTGCGGAAT+CGG | + | chr4_4:45801780-45801799 | Msa0683360:intron | 35.0% | |
GTTGATATGTATAGTGCCAT+AGG | + | chr4_4:45801886-45801905 | Msa0683360:intron | 35.0% | |
!! | GAAAACCGTGTTTTTGCATA+TGG | + | chr4_4:45802350-45802369 | Msa0683360:intron | 35.0% |
AGTGCTTCATAGGTTACATT+TGG | + | chr4_4:45802524-45802543 | Msa0683360:intron | 35.0% | |
! | GCCAAAGCTTTTATGTTTGA+AGG | + | chr4_4:45802904-45802923 | Msa0683360:intron | 35.0% |
TCCATCAGAAGATTTAGACT+TGG | - | chr4_4:45803115-45803134 | None:intergenic | 35.0% | |
AGTCTAAATCTTCTGATGGA+AGG | + | chr4_4:45803115-45803134 | Msa0683360:CDS | 35.0% | |
! | CGAAACCTTGTTTACATAGT+TGG | + | chr4_4:45803168-45803187 | Msa0683360:CDS | 35.0% |
GCAATCCAACTATGTAAACA+AGG | - | chr4_4:45803176-45803195 | None:intergenic | 35.0% | |
AAATAATCAAAGAGTGGAGG+AGG | - | chr4_4:45803234-45803253 | None:intergenic | 35.0% | |
CTGAAATAATCAAAGAGTGG+AGG | - | chr4_4:45803237-45803256 | None:intergenic | 35.0% | |
!!! | GAGAGTATTTTGGTCAGTAT+GGG | + | chr4_4:45803321-45803340 | Msa0683360:CDS | 35.0% |
TACACACTGCAAGTTTCATT+AGG | - | chr4_4:45803401-45803420 | None:intergenic | 35.0% | |
GATTAAAGAAACTGCTAAGG+TGG | + | chr4_4:45803665-45803684 | Msa0683360:intron | 35.0% | |
GTCATTTCTTTACATAGCAC+GGG | + | chr4_4:45803800-45803819 | Msa0683360:intron | 35.0% | |
GATTAAAGAAACTGCTAAGG+TGG | + | chr4_4:45803665-45803684 | Msa0683360:intron | 35.0% | |
CAAACGAAGAGGAATCAATT+CGG | + | chr4_4:45803985-45804004 | Msa0683360:CDS | 35.0% | |
CGGTGTATTCAAAATGTACA+CGG | + | chr4_4:45804005-45804024 | Msa0683360:CDS | 35.0% | |
AGCAGATATGTGTACCTTAA+AGG | - | chr4_4:45804050-45804069 | None:intergenic | 35.0% | |
! | CCATGCATGACAATATTTTG+TGG | - | chr4_4:45804164-45804183 | None:intergenic | 35.0% |
CCACAAAATATTGTCATGCA+TGG | + | chr4_4:45804161-45804180 | Msa0683360:CDS | 35.0% | |
CGTGCAAATATAGACAATCA+GGG | - | chr4_4:45804296-45804315 | None:intergenic | 35.0% | |
TCGTGCAAATATAGACAATC+AGG | - | chr4_4:45804297-45804316 | None:intergenic | 35.0% | |
TGATTGTCTATATTTGCACG+AGG | + | chr4_4:45804296-45804315 | Msa0683360:CDS | 35.0% | |
AAATAATTTCCGCTTACACC+AGG | + | chr4_4:45804352-45804371 | Msa0683360:CDS | 35.0% | |
TTATTGGTCCAATCATCTAG+GGG | - | chr4_4:45804779-45804798 | None:intergenic | 35.0% | |
! | GGGCTTTTCTGTAGAATTAT+TGG | - | chr4_4:45804795-45804814 | None:intergenic | 35.0% |
! | GTTGGTGCACTTTTAACAAT+GGG | - | chr4_4:45804815-45804834 | None:intergenic | 35.0% |
!! | AGTTGGTGCACTTTTAACAA+TGG | - | chr4_4:45804816-45804835 | None:intergenic | 35.0% |
TATATAGGGACGTCAAAAAG+GGG | - | chr4_4:45804844-45804863 | None:intergenic | 35.0% | |
CTATATAGGGACGTCAAAAA+GGG | - | chr4_4:45804845-45804864 | None:intergenic | 35.0% | |
ACTATATAGGGACGTCAAAA+AGG | - | chr4_4:45804846-45804865 | None:intergenic | 35.0% | |
CGAAAATAGAGGGACTATAT+AGG | - | chr4_4:45804859-45804878 | None:intergenic | 35.0% | |
AAGCTAAAGCCGAAAATAGA+GGG | - | chr4_4:45804869-45804888 | None:intergenic | 35.0% | |
AAAGCTAAAGCCGAAAATAG+AGG | - | chr4_4:45804870-45804889 | None:intergenic | 35.0% | |
!! | TCTATTTTCGGCTTTAGCTT+TGG | + | chr4_4:45804869-45804888 | Msa0683360:intron | 35.0% |
TCACCTCCAAATGGAATTAA+TGG | + | chr4_4:45805041-45805060 | Msa0683360:CDS | 35.0% | |
CACCTCCAAATGGAATTAAT+GGG | + | chr4_4:45805042-45805061 | Msa0683360:CDS | 35.0% | |
TGTCTCCCATTAATTCCATT+TGG | - | chr4_4:45805050-45805069 | None:intergenic | 35.0% | |
CCAATGTTTATGTGTGTTAG+GGG | + | chr4_4:45805161-45805180 | Msa0683360:intron | 35.0% | |
!! | CTGTTGACTGTATCAGATTT+TGG | - | chr4_4:45805299-45805318 | None:intergenic | 35.0% |
AGAGTCGTAATACAATACCA+AGG | + | chr4_4:45805408-45805427 | Msa0683360:CDS | 35.0% | |
GAGTCGTAATACAATACCAA+GGG | + | chr4_4:45805409-45805428 | Msa0683360:CDS | 35.0% | |
ATATATTAGCATGGACAGTC+TGG | + | chr4_4:45805463-45805482 | Msa0683360:CDS | 35.0% | |
TTCTTTAAATTGACAGGCAC+AGG | - | chr4_4:45805527-45805546 | None:intergenic | 35.0% | |
TAAAGAACGAGTTGTCTTCT+CGG | + | chr4_4:45805540-45805559 | Msa0683360:CDS | 35.0% | |
AAATCTCCTCAAGTTCAAGA+AGG | + | chr4_4:45805746-45805765 | Msa0683360:CDS | 35.0% | |
AAAACTTCCACACCAGTTAA+TGG | + | chr4_4:45805824-45805843 | Msa0683360:CDS | 35.0% | |
!!! | TAATGGCGTTTTTAGTCCAA+AGG | + | chr4_4:45805841-45805860 | Msa0683360:CDS | 35.0% |
! | TTGTCTTTCTTATTTGCCCA+AGG | + | chr4_4:45805973-45805992 | Msa0683360:CDS | 35.0% |
ATCTTCCAATGATAGAGTTC+GGG | + | chr4_4:45806084-45806103 | Msa0683360:CDS | 35.0% | |
TACTTCGTGATGAAAGAAAC+AGG | + | chr4_4:45806185-45806204 | Msa0683360:CDS | 35.0% | |
TGTGATGCTGCTATTGATAA+GGG | + | chr4_4:45806241-45806260 | Msa0683360:CDS | 35.0% | |
TATATTATGCGGTGACGTTA+AGG | - | chr4_4:45806323-45806342 | None:intergenic | 35.0% | |
!! | ATGTTTTTAAAGGACAAGGC+TGG | - | chr4_4:45806375-45806394 | None:intergenic | 35.0% |
TGATTGAGTATGTGACTCTT+AGG | - | chr4_4:45806514-45806533 | None:intergenic | 35.0% | |
TCACATACTCAATCAGAATC+TGG | + | chr4_4:45806519-45806538 | Msa0683360:CDS | 35.0% | |
CACATACTCAATCAGAATCT+GGG | + | chr4_4:45806520-45806539 | Msa0683360:CDS | 35.0% | |
! | TTTGAGGAAGCTGAAAGTAT+AGG | + | chr4_4:45806601-45806620 | Msa0683360:CDS | 35.0% |
AAGCTAATGTAGCAAGTTCA+AGG | - | chr4_4:45806682-45806701 | None:intergenic | 35.0% | |
AATCCTGTTGCTGAATGTAT+TGG | + | chr4_4:45806923-45806942 | Msa0683360:intron | 35.0% | |
ATTCCAATACATTCAGCAAC+AGG | - | chr4_4:45806929-45806948 | None:intergenic | 35.0% | |
AAAAATGTACATGGCAAGCA+TGG | - | chr4_4:45807064-45807083 | None:intergenic | 35.0% | |
GATTAATGGAGAGCTATTAG+AGG | + | chr4_4:45807123-45807142 | Msa0683360:intron | 35.0% | |
TATCTAGAGAAGTCTATGGA+AGG | + | chr4_4:45807193-45807212 | Msa0683360:intron | 35.0% | |
TTCAATGATGATTGCTCTAC+GGG | + | chr4_4:45807267-45807286 | Msa0683360:intron | 35.0% | |
!! | TTTATGTTGGTTCTAGACGA+AGG | + | chr4_4:45807487-45807506 | Msa0683360:intron | 35.0% |
! | CATGGTTTTTGAATTTTCCC+AGG | + | chr4_4:45807598-45807617 | Msa0683360:intron | 35.0% |
AGTTCCATCATACAAAGCAA+TGG | + | chr4_4:45807735-45807754 | Msa0683360:intron | 35.0% | |
TTCTCCATTGCTTTGTATGA+TGG | - | chr4_4:45807742-45807761 | None:intergenic | 35.0% | |
GGAAATTTCTCCATAAGTAG+AGG | - | chr4_4:45807848-45807867 | None:intergenic | 35.0% | |
! | TATAGGCTTTATAGTCGAGT+AGG | - | chr4_4:45807869-45807888 | None:intergenic | 35.0% |
TCAGTTCCATGCAACATTAT+AGG | - | chr4_4:45807886-45807905 | None:intergenic | 35.0% | |
GGCAGTAAAATAAACTAAGG+GGG | + | chr4_4:45807927-45807946 | Msa0683360:intron | 35.0% | |
! | GACATTTCTAGGAAAATTGG+AGG | + | chr4_4:45808076-45808095 | Msa0683360:intron | 35.0% |
TTATTCCCATATGAGAAGGT+GGG | - | chr4_4:45808149-45808168 | None:intergenic | 35.0% | |
ACCTTCTCATATGGGAATAA+GGG | + | chr4_4:45808149-45808168 | Msa0683360:intron | 35.0% | |
TATGGGAATAAGGGAAATCA+CGG | + | chr4_4:45808158-45808177 | Msa0683360:intron | 35.0% | |
GTTGAGAAAAGACTGTTCAT+GGG | - | chr4_4:45808214-45808233 | None:intergenic | 35.0% | |
AGTTTAAGAATGACATTCCC+GGG | - | chr4_4:45808279-45808298 | None:intergenic | 35.0% | |
GAGTTTAAGAATGACATTCC+CGG | - | chr4_4:45808280-45808299 | None:intergenic | 35.0% | |
TCTCATTTGTGCAACACTAA+GGG | - | chr4_4:45808303-45808322 | None:intergenic | 35.0% | |
TTCTCATTTGTGCAACACTA+AGG | - | chr4_4:45808304-45808323 | None:intergenic | 35.0% | |
GCTTTGTAAGAACCAAGTAA+TGG | + | chr4_4:45808386-45808405 | Msa0683360:intron | 35.0% | |
! | TACAACTGCAACTTCTAAAG+CGG | + | chr4_4:45808589-45808608 | Msa0683360:intron | 35.0% |
!! | TGCTTGATTCGTTGTTTTCA+AGG | + | chr4_4:45808613-45808632 | Msa0683360:intron | 35.0% |
CTGAGGTGAATTTCTCAAAA+AGG | - | chr4_4:45808990-45809009 | None:intergenic | 35.0% | |
CACAGGCGAAATTGAATTTA+TGG | + | chr4_4:45809036-45809055 | Msa0683360:CDS | 35.0% | |
TCCCAATTTCAGGAAATCTA+AGG | - | chr4_4:45809219-45809238 | None:intergenic | 35.0% | |
!!! | GGGAATACTTTTTCTCAACT+TGG | + | chr4_4:45809235-45809254 | Msa0683360:CDS | 35.0% |
! | TCTCAACTTGGTGATTCATA+TGG | + | chr4_4:45809247-45809266 | Msa0683360:CDS | 35.0% |
ATATGGTATTTCCTCAAGGT+TGG | + | chr4_4:45809264-45809283 | Msa0683360:CDS | 35.0% | |
!! | CTTTTGAGGAATGAAAGACT+TGG | + | chr4_4:45809421-45809440 | Msa0683360:CDS | 35.0% |
! | GGATTTAACAAGTTTTACCC+AGG | + | chr4_4:45809442-45809461 | Msa0683360:CDS | 35.0% |
TTGTAGATATCTCCAGAGTT+TGG | - | chr4_4:45809493-45809512 | None:intergenic | 35.0% | |
!! | ACATTTGGGATGTGACTTTT+TGG | + | chr4_4:45809517-45809536 | Msa0683360:exon | 35.0% |
ATGTTGGAAATGGTAAAACC+TGG | + | chr4_4:45809556-45809575 | Msa0683360:three_prime_UTR | 35.0% | |
GTACTCATGACTGGTATATT+GGG | + | chr4_4:45809612-45809631 | Msa0683360:three_prime_UTR | 35.0% | |
CAGCCATAAATTACACTTCT+TGG | - | chr4_4:45809654-45809673 | None:intergenic | 35.0% | |
CAGAACTAAAAAGGAAAGAG+GGG | - | chr4_4:45809891-45809910 | None:intergenic | 35.0% | |
CCAGAACTAAAAAGGAAAGA+GGG | - | chr4_4:45809892-45809911 | None:intergenic | 35.0% | |
TCCAGAACTAAAAAGGAAAG+AGG | - | chr4_4:45809893-45809912 | None:intergenic | 35.0% | |
CTGCAAATCCAGAACTAAAA+AGG | - | chr4_4:45809900-45809919 | None:intergenic | 35.0% | |
!!! | CTTTTTAGTTCTGGATTTGC+AGG | + | chr4_4:45809898-45809917 | Msa0683360:three_prime_UTR | 35.0% |
GCTAACATGATCAAATTAGC+AGG | + | chr4_4:45809948-45809967 | Msa0683360:three_prime_UTR | 35.0% | |
TATCCTTGTGGTATGAAGTA+TGG | + | chr4_4:45810108-45810127 | Msa0683360:three_prime_UTR | 35.0% | |
ATCCTTGTGGTATGAAGTAT+GGG | + | chr4_4:45810109-45810128 | Msa0683360:three_prime_UTR | 35.0% | |
AAGAAGATGAAACTGTGAGG+AGG | - | chr4_4:45801618-45801637 | None:intergenic | 40.0% | |
GAGAAGAAGATGAAACTGTG+AGG | - | chr4_4:45801621-45801640 | None:intergenic | 40.0% | |
TAGGAGTTGAAGACTAACAG+TGG | - | chr4_4:45801651-45801670 | None:intergenic | 40.0% | |
AGGGAAATCATGAGTGATGA+AGG | + | chr4_4:45802194-45802213 | Msa0683360:exon | 40.0% | |
TCATGAGTGATGAAGGAGAA+AGG | + | chr4_4:45802201-45802220 | Msa0683360:exon | 40.0% | |
ATCCGTCAAATCCATCTCTT+CGG | - | chr4_4:45802243-45802262 | None:intergenic | 40.0% | |
CTTGATTGCAGATCTGTGTA+TGG | + | chr4_4:45802716-45802735 | Msa0683360:intron | 40.0% | |
GCCAAGTCTAAATCTTCTGA+TGG | + | chr4_4:45803111-45803130 | Msa0683360:CDS | 40.0% | |
TTACATAGTTGGATTGCCTC+TGG | + | chr4_4:45803179-45803198 | Msa0683360:CDS | 40.0% | |
AAGACTCCGAATAGAAAACG+AGG | - | chr4_4:45803265-45803284 | None:intergenic | 40.0% | |
!!! | CGAGAGTATTTTGGTCAGTA+TGG | + | chr4_4:45803320-45803339 | Msa0683360:CDS | 40.0% |
!!! | GTATTTTGGTCAGTATGGGA+AGG | + | chr4_4:45803325-45803344 | Msa0683360:CDS | 40.0% |
!! | AAAAGTGTCAATGTCACGGA+CGG | + | chr4_4:45803352-45803371 | Msa0683360:CDS | 40.0% |
AAAGAAACTGCTAAGGTGGA+AGG | + | chr4_4:45803669-45803688 | Msa0683360:intron | 40.0% | |
CGGGATTAAAGAAACTGCTA+AGG | + | chr4_4:45803819-45803838 | Msa0683360:intron | 40.0% | |
TAAAGAAACTGCTAAGGTGG+AGG | + | chr4_4:45803668-45803687 | Msa0683360:intron | 40.0% | |
AAAGAAACTGCTAAGGTGGA+GGG | + | chr4_4:45803669-45803688 | Msa0683360:intron | 40.0% | |
AAGGAGTCATATGGAGAAAG+GGG | - | chr4_4:45803857-45803876 | None:intergenic | 40.0% | |
CAAGGAGTCATATGGAGAAA+GGG | - | chr4_4:45803858-45803877 | None:intergenic | 40.0% | |
!!! | TGTACACGGATTTGTTTTGG+AGG | + | chr4_4:45804019-45804038 | Msa0683360:CDS | 40.0% |
!!! | GTACACGGATTTGTTTTGGA+GGG | + | chr4_4:45804020-45804039 | Msa0683360:CDS | 40.0% |
! | GTATGTTTCAGGGCATGTTT+TGG | + | chr4_4:45804136-45804155 | Msa0683360:intron | 40.0% |
TGTCTATATTTGCACGAGGT+TGG | + | chr4_4:45804300-45804319 | Msa0683360:CDS | 40.0% | |
AGAACATTACCTGGTGTAAG+CGG | - | chr4_4:45804364-45804383 | None:intergenic | 40.0% | |
AGAACATTGCCTAGTGTAAG+CGG | - | chr4_4:45804396-45804415 | None:intergenic | 40.0% | |
!! | CGTTTTGTTCTGAGTTCTGA+TGG | + | chr4_4:45804549-45804568 | Msa0683360:intron | 40.0% |
CTGAAGCCTAAATCAGAACA+TGG | - | chr4_4:45804598-45804617 | None:intergenic | 40.0% | |
GTGTCACAAACAGTATGCAA+CGG | + | chr4_4:45804729-45804748 | Msa0683360:CDS | 40.0% | |
GTAAGAAGTTCACCTCCAAA+TGG | + | chr4_4:45805032-45805051 | Msa0683360:CDS | 40.0% | |
CTCCCATTAATTCCATTTGG+AGG | - | chr4_4:45805047-45805066 | None:intergenic | 40.0% | |
CCCCTAACACACATAAACAT+TGG | - | chr4_4:45805164-45805183 | None:intergenic | 40.0% | |
ATGTGATAAACCTCCAACAG+GGG | - | chr4_4:45805210-45805229 | None:intergenic | 40.0% | |
GATGTGATAAACCTCCAACA+GGG | - | chr4_4:45805211-45805230 | None:intergenic | 40.0% | |
!! | CTGTTGACTGTATCAGGTTT+TGG | - | chr4_4:45805251-45805270 | None:intergenic | 40.0% |
!!! | TATCAGATTTTGGCTTGGAC+AGG | - | chr4_4:45805289-45805308 | None:intergenic | 40.0% |
!!! | GACTGTATCAGATTTTGGCT+TGG | - | chr4_4:45805294-45805313 | None:intergenic | 40.0% |
! | TGCCTTTTCTACTGCTGTTA+CGG | + | chr4_4:45805325-45805344 | Msa0683360:CDS | 40.0% |
CGACTCTCATCATTCAATAG+TGG | - | chr4_4:45805395-45805414 | None:intergenic | 40.0% | |
! | ACTGGACATTCTTTTTGCAC+CGG | + | chr4_4:45805629-45805648 | Msa0683360:CDS | 40.0% |
AAATTCCGTATCACTTCCTC+TGG | - | chr4_4:45805656-45805675 | None:intergenic | 40.0% | |
GTTAATTGAGGAGAACTCAC+TGG | - | chr4_4:45805681-45805700 | None:intergenic | 40.0% | |
TCAAGACATATTCAGTAGGC+AGG | - | chr4_4:45805724-45805743 | None:intergenic | 40.0% | |
TGTGATCCTTCTTGAACTTG+AGG | - | chr4_4:45805755-45805774 | None:intergenic | 40.0% | |
! | AACTGGTGTGGAAGTTTTAC+CGG | - | chr4_4:45805822-45805841 | None:intergenic | 40.0% |
AAAAACGCCATTAACTGGTG+TGG | - | chr4_4:45805834-45805853 | None:intergenic | 40.0% | |
GGACTAAAAACGCCATTAAC+TGG | - | chr4_4:45805839-45805858 | None:intergenic | 40.0% | |
TTTAGTCCAAAGGAACAGTG+TGG | + | chr4_4:45805851-45805870 | Msa0683360:CDS | 40.0% | |
CACCATACTGCATTAGACAA+GGG | - | chr4_4:45806033-45806052 | None:intergenic | 40.0% | |
TCACCATACTGCATTAGACA+AGG | - | chr4_4:45806034-45806053 | None:intergenic | 40.0% | |
ACATCATTTCCAGCAGTACA+AGG | - | chr4_4:45806058-45806077 | None:intergenic | 40.0% | |
TTCATCCCGAACTCTATCAT+TGG | - | chr4_4:45806092-45806111 | None:intergenic | 40.0% | |
TCGTCTAGCATGGTATGTAA+TGG | + | chr4_4:45806124-45806143 | Msa0683360:CDS | 40.0% | |
GGCTATCCTGAGAAATTGAT+CGG | + | chr4_4:45806145-45806164 | Msa0683360:CDS | 40.0% | |
TATCCTGAGAAATTGATCGG+TGG | + | chr4_4:45806148-45806167 | Msa0683360:CDS | 40.0% | |
GAAAGAAACAGGCAAAGCAT+TGG | + | chr4_4:45806196-45806215 | Msa0683360:CDS | 40.0% | |
!! | CAAAGCATTGGAAGGTTAGT+TGG | + | chr4_4:45806208-45806227 | Msa0683360:CDS | 40.0% |
GTGTGATGCTGCTATTGATA+AGG | + | chr4_4:45806240-45806259 | Msa0683360:CDS | 40.0% | |
! | AGTCAAGGTTCTCTTTTGCA+AGG | + | chr4_4:45806425-45806444 | Msa0683360:CDS | 40.0% |
CTTTCCTACCAGTAACTTTG+AGG | + | chr4_4:45806585-45806604 | Msa0683360:CDS | 40.0% | |
TTCAGCTTCCTCAAAGTTAC+TGG | - | chr4_4:45806596-45806615 | None:intergenic | 40.0% | |
!! | AAGCTTGTTGGAAGAAGCAA+TGG | - | chr4_4:45806638-45806657 | None:intergenic | 40.0% |
ATACTCACCAGAAAGCTTGT+TGG | - | chr4_4:45806650-45806669 | None:intergenic | 40.0% | |
CAGATGATCAGATTTGTCAC+TGG | - | chr4_4:45806721-45806740 | None:intergenic | 40.0% | |
CGAGTATCTAGAGAAGTCTA+TGG | + | chr4_4:45807189-45807208 | Msa0683360:intron | 40.0% | |
!! | TGCATTTTGAGTAAGATGGG+GGG | - | chr4_4:45807293-45807312 | None:intergenic | 40.0% |
!! | CTGCATTTTGAGTAAGATGG+GGG | - | chr4_4:45807294-45807313 | None:intergenic | 40.0% |
!! | CCTGCATTTTGAGTAAGATG+GGG | - | chr4_4:45807295-45807314 | None:intergenic | 40.0% |
!! | CCCTGCATTTTGAGTAAGAT+GGG | - | chr4_4:45807296-45807315 | None:intergenic | 40.0% |
CCCATCTTACTCAAAATGCA+GGG | + | chr4_4:45807293-45807312 | Msa0683360:intron | 40.0% | |
!! | TCCCTGCATTTTGAGTAAGA+TGG | - | chr4_4:45807297-45807316 | None:intergenic | 40.0% |
AACAAAGGAGAAACAAGCCA+GGG | + | chr4_4:45807570-45807589 | Msa0683360:intron | 40.0% | |
TCAAAAACCATGTTTCTCCC+TGG | - | chr4_4:45807590-45807609 | None:intergenic | 40.0% | |
! | GAAATGAGACACTTTTGGTG+TGG | - | chr4_4:45807706-45807725 | None:intergenic | 40.0% |
ATACCAACCAGAATCCAAGT+AGG | + | chr4_4:45807772-45807791 | Msa0683360:intron | 40.0% | |
TACCAACCAGAATCCAAGTA+GGG | + | chr4_4:45807773-45807792 | Msa0683360:intron | 40.0% | |
TCCAAGTAGGGTAGATGAAA+TGG | + | chr4_4:45807785-45807804 | Msa0683360:intron | 40.0% | |
TCCATTTCATCTACCCTACT+TGG | - | chr4_4:45807789-45807808 | None:intergenic | 40.0% | |
ATGTCAGGCAGTAAAAAGTC+AGG | + | chr4_4:45807906-45807925 | Msa0683360:intron | 40.0% | |
AGTAGGATATTCCTGTGAGT+AGG | - | chr4_4:45807990-45808009 | None:intergenic | 40.0% | |
ACATTCCCACCTTCTCATAT+GGG | + | chr4_4:45808141-45808160 | Msa0683360:intron | 40.0% | |
CTTATTCCCATATGAGAAGG+TGG | - | chr4_4:45808150-45808169 | None:intergenic | 40.0% | |
CACCTTCTCATATGGGAATA+AGG | + | chr4_4:45808148-45808167 | Msa0683360:intron | 40.0% | |
TCCCTTATTCCCATATGAGA+AGG | - | chr4_4:45808153-45808172 | None:intergenic | 40.0% | |
ATGGGAATAAGGGAAATCAC+GGG | + | chr4_4:45808159-45808178 | Msa0683360:intron | 40.0% | |
AAGACTGTTCATGGGTACAA+AGG | - | chr4_4:45808206-45808225 | None:intergenic | 40.0% | |
GGTTGAGAAAAGACTGTTCA+TGG | - | chr4_4:45808215-45808234 | None:intergenic | 40.0% | |
ATTCCCTAGCTATGTATTCC+CGG | + | chr4_4:45808258-45808277 | Msa0683360:intron | 40.0% | |
CTCATTTGTGCAACACTAAG+GGG | - | chr4_4:45808302-45808321 | None:intergenic | 40.0% | |
AATGTTAACAAACTGTGGCC+TGG | + | chr4_4:45808322-45808341 | Msa0683360:intron | 40.0% | |
GTTCTTACAAAGCCCTATGA+TGG | - | chr4_4:45808379-45808398 | None:intergenic | 40.0% | |
ACCAAGTAATGGCTCGTAAA+AGG | + | chr4_4:45808397-45808416 | Msa0683360:intron | 40.0% | |
! | ACCTTTTACGAGCCATTACT+TGG | - | chr4_4:45808401-45808420 | None:intergenic | 40.0% |
TTGGATACAAGTGTGTTGTC+TGG | + | chr4_4:45808526-45808545 | Msa0683360:intron | 40.0% | |
CTTGGAATTGAAAATCCTGG+TGG | - | chr4_4:45808797-45808816 | None:intergenic | 40.0% | |
CTGCTTGGAATTGAAAATCC+TGG | - | chr4_4:45808800-45808819 | None:intergenic | 40.0% | |
! | CAGGATTTTCAATTCCAAGC+AGG | + | chr4_4:45808798-45808817 | Msa0683360:CDS | 40.0% |
CAGATAGGGAGTCAAAAAAC+TGG | - | chr4_4:45808862-45808881 | None:intergenic | 40.0% | |
!!! | CAGTTTTTTGACTCCCTATC+TGG | + | chr4_4:45808860-45808879 | Msa0683360:CDS | 40.0% |
ACACTCTCAGCTGGAAATAT+TGG | + | chr4_4:45809010-45809029 | Msa0683360:CDS | 40.0% | |
TGCACAAAACAGTCAATCAC+TGG | + | chr4_4:45809099-45809118 | Msa0683360:CDS | 40.0% | |
GTGCTAGAGTTCTTTGCATT+AGG | - | chr4_4:45809186-45809205 | None:intergenic | 40.0% | |
CATAGACAACTGAGGATAAG+GGG | - | chr4_4:45809314-45809333 | None:intergenic | 40.0% | |
GCATAGACAACTGAGGATAA+GGG | - | chr4_4:45809315-45809334 | None:intergenic | 40.0% | |
TGCATAGACAACTGAGGATA+AGG | - | chr4_4:45809316-45809335 | None:intergenic | 40.0% | |
CATTGGCCATTTGACAAGAT+TGG | - | chr4_4:45809352-45809371 | None:intergenic | 40.0% | |
CAATCTTGTCAAATGGCCAA+TGG | + | chr4_4:45809350-45809369 | Msa0683360:CDS | 40.0% | |
TTGTCAAATGGCCAATGGAA+TGG | + | chr4_4:45809355-45809374 | Msa0683360:CDS | 40.0% | |
TGTCAAATGGCCAATGGAAT+GGG | + | chr4_4:45809356-45809375 | Msa0683360:CDS | 40.0% | |
AAATATCGGATGCCAAACTC+TGG | + | chr4_4:45809478-45809497 | Msa0683360:CDS | 40.0% | |
ATGGTAAAACCTGGCAGAAA+TGG | + | chr4_4:45809565-45809584 | Msa0683360:three_prime_UTR | 40.0% | |
AAAATCTGTCCATTTCTGCC+AGG | - | chr4_4:45809577-45809596 | None:intergenic | 40.0% | |
! | AGATTTTGTGCAGCTATGGA+TGG | + | chr4_4:45809590-45809609 | Msa0683360:three_prime_UTR | 40.0% |
GGTACTCATGACTGGTATAT+TGG | + | chr4_4:45809611-45809630 | Msa0683360:three_prime_UTR | 40.0% | |
CACTTCTTGGGATCATCATT+AGG | - | chr4_4:45809641-45809660 | None:intergenic | 40.0% | |
GTGTAATTTATGGCTGCAGT+TGG | + | chr4_4:45809658-45809677 | Msa0683360:three_prime_UTR | 40.0% | |
!!! | CCCTCTTTCCTTTTTAGTTC+TGG | + | chr4_4:45809889-45809908 | Msa0683360:three_prime_UTR | 40.0% |
!! | ATTTGCAGGTGAGCTGTTTT+GGG | + | chr4_4:45809912-45809931 | Msa0683360:three_prime_UTR | 40.0% |
TCCTTGTGGTATGAAGTATG+GGG | + | chr4_4:45810110-45810129 | Msa0683360:three_prime_UTR | 40.0% | |
!! | AGAGAGAAGAAGGTGCTGTT+TGG | - | chr4_4:45801485-45801504 | None:intergenic | 45.0% |
! | TGCCGAAGAGATGGATTTGA+CGG | + | chr4_4:45802238-45802257 | Msa0683360:CDS | 45.0% |
CAGTTGAAACCTTGCAGATG+TGG | + | chr4_4:45802266-45802285 | Msa0683360:CDS | 45.0% | |
ACCTTGCAGATGTGGTTATG+AGG | + | chr4_4:45802274-45802293 | Msa0683360:CDS | 45.0% | |
ACCTCATAACCACATCTGCA+AGG | - | chr4_4:45802278-45802297 | None:intergenic | 45.0% | |
TTGTCGTGTCAGTGCTTCAT+AGG | + | chr4_4:45802514-45802533 | Msa0683360:intron | 45.0% | |
TGCAGATCTGTGTATGGTGT+TGG | + | chr4_4:45802722-45802741 | Msa0683360:intron | 45.0% | |
!! | ATGGTGTTGGCACCACATAA+TGG | + | chr4_4:45802735-45802754 | Msa0683360:CDS | 45.0% |
!! | TTGGCACCACATAATGGACA+TGG | + | chr4_4:45802741-45802760 | Msa0683360:CDS | 45.0% |
TCTCAGCCATGTCCATTATG+TGG | - | chr4_4:45802750-45802769 | None:intergenic | 45.0% | |
!! | CATAATGGACATGGCTGAGA+AGG | + | chr4_4:45802750-45802769 | Msa0683360:CDS | 45.0% |
CATGGCTGAGAAGGATGATA+CGG | + | chr4_4:45802759-45802778 | Msa0683360:CDS | 45.0% | |
CTGAGAAGGATGATACGGAT+GGG | + | chr4_4:45802764-45802783 | Msa0683360:CDS | 45.0% | |
! | GTGTCGTTCTCCTTATGACA+AGG | + | chr4_4:45802798-45802817 | Msa0683360:CDS | 45.0% |
GGAAAAGATTGTTGGGACAG+CGG | + | chr4_4:45802819-45802838 | Msa0683360:CDS | 45.0% | |
!!! | CTCCAGAAGCGAGAGTATTT+TGG | + | chr4_4:45803311-45803330 | Msa0683360:CDS | 45.0% |
GACCAAAATACTCTCGCTTC+TGG | - | chr4_4:45803316-45803335 | None:intergenic | 45.0% | |
AAGGAGTCAGATGGAGAAAG+GGG | - | chr4_4:45803700-45803719 | None:intergenic | 45.0% | |
CAAGGAGTCAGATGGAGAAA+GGG | - | chr4_4:45803701-45803720 | None:intergenic | 45.0% | |
GCAAGGAGTCATATGGAGAA+AGG | - | chr4_4:45803859-45803878 | None:intergenic | 45.0% | |
!! | TTTTGGAGGGCAGACCTTTA+AGG | + | chr4_4:45804033-45804052 | Msa0683360:CDS | 45.0% |
ACACATCTTACTCATGTCCC+TGG | + | chr4_4:45804077-45804096 | Msa0683360:intron | 45.0% | |
!! | AGACAATCAGGGTTGATGCA+AGG | - | chr4_4:45804285-45804304 | None:intergenic | 45.0% |
AGTCGAGTTCAACAGATCAC+TGG | + | chr4_4:45804707-45804726 | Msa0683360:CDS | 45.0% | |
TCACAAACAGTATGCAACGG+CGG | + | chr4_4:45804732-45804751 | Msa0683360:CDS | 45.0% | |
GTCAAAAAGGGGCTTACAGT+TGG | - | chr4_4:45804833-45804852 | None:intergenic | 45.0% | |
TGATACATACCAAGCAGCAC+TGG | - | chr4_4:45805087-45805106 | None:intergenic | 45.0% | |
TGTGATAAACCTCCAACAGG+GGG | - | chr4_4:45805209-45805228 | None:intergenic | 45.0% | |
GGATGTGATAAACCTCCAAC+AGG | - | chr4_4:45805212-45805231 | None:intergenic | 45.0% | |
!!! | GTATCAGGTTTTGGCTTGGA+CGG | - | chr4_4:45805242-45805261 | None:intergenic | 45.0% |
!!! | GACTGTATCAGGTTTTGGCT+TGG | - | chr4_4:45805246-45805265 | None:intergenic | 45.0% |
! | GCCTTTTCTACTGCTGTTAC+GGG | + | chr4_4:45805326-45805345 | Msa0683360:CDS | 45.0% |
! | CCTTTTCTACTGCTGTTACG+GGG | + | chr4_4:45805327-45805346 | Msa0683360:CDS | 45.0% |
CAGCACAATGTGATGGTTCA+AGG | + | chr4_4:45805366-45805385 | Msa0683360:CDS | 45.0% | |
CACAATGTGATGGTTCAAGG+AGG | + | chr4_4:45805369-45805388 | Msa0683360:CDS | 45.0% | |
CTGTCACTATCTCGTGACAA+TGG | - | chr4_4:45805566-45805585 | None:intergenic | 45.0% | |
TTGTCACGAGATAGTGACAG+AGG | + | chr4_4:45805566-45805585 | Msa0683360:CDS | 45.0% | |
TATTCAGTAGGCAGGCTACT+AGG | - | chr4_4:45805716-45805735 | None:intergenic | 45.0% | |
!! | CGGCTGTATTGGTTGTTATC+GGG | - | chr4_4:45805802-45805821 | None:intergenic | 45.0% |
!! | CCGGCTGTATTGGTTGTTAT+CGG | - | chr4_4:45805803-45805822 | None:intergenic | 45.0% |
CCGATAACAACCAATACAGC+CGG | + | chr4_4:45805800-45805819 | Msa0683360:CDS | 45.0% | |
!! | GGAAGTTTTACCGGCTGTAT+TGG | - | chr4_4:45805813-45805832 | None:intergenic | 45.0% |
AGCCCTTGTCTAATGCAGTA+TGG | + | chr4_4:45806028-45806047 | Msa0683360:CDS | 45.0% | |
TATGGTGAACCTTGTACTGC+TGG | + | chr4_4:45806046-45806065 | Msa0683360:CDS | 45.0% | |
!! | GAAACAGGCAAAGCATTGGA+AGG | + | chr4_4:45806200-45806219 | Msa0683360:CDS | 45.0% |
!! | GAAGGTTAGTTGGTGATGCT+GGG | + | chr4_4:45806218-45806237 | Msa0683360:CDS | 45.0% |
ATCCCAGGGATCAAAATCGA+GGG | - | chr4_4:45806296-45806315 | None:intergenic | 45.0% | |
! | AAGGTTCTCTTTTGCAAGGC+AGG | + | chr4_4:45806429-45806448 | Msa0683360:CDS | 45.0% |
! | TGCTGGCTGACAGTATAAGA+CGG | - | chr4_4:45806487-45806506 | None:intergenic | 45.0% |
TGAGTATGTGACTCTTAGGC+TGG | - | chr4_4:45806510-45806529 | None:intergenic | 45.0% | |
GAGAAGTTGGGCATAGCAAA+TGG | + | chr4_4:45806562-45806581 | Msa0683360:CDS | 45.0% | |
GCTTCCTCAAAGTTACTGGT+AGG | - | chr4_4:45806592-45806611 | None:intergenic | 45.0% | |
GCTTCTTCCAACAAGCTTTC+TGG | + | chr4_4:45806640-45806659 | Msa0683360:CDS | 45.0% | |
! | TTTTGTGTGGTGCTTGCCAT+AGG | + | chr4_4:45806778-45806797 | Msa0683360:intron | 45.0% |
TTTGTGTGGTGCTTGCCATA+GGG | + | chr4_4:45806779-45806798 | Msa0683360:intron | 45.0% | |
! | AGGATTTGATAACCTGCGCA+TGG | + | chr4_4:45807143-45807162 | Msa0683360:intron | 45.0% |
! | GGATTTGATAACCTGCGCAT+GGG | + | chr4_4:45807144-45807163 | Msa0683360:intron | 45.0% |
CCCCATCTTACTCAAAATGC+AGG | + | chr4_4:45807292-45807311 | Msa0683360:intron | 45.0% | |
ACTGGAATCCATCTTCTGGT+AGG | - | chr4_4:45807324-45807343 | None:intergenic | 45.0% | |
! | ACCAGAAGATGGATTCCAGT+AGG | + | chr4_4:45807324-45807343 | Msa0683360:intron | 45.0% |
ACCTACTGGAATCCATCTTC+TGG | - | chr4_4:45807328-45807347 | None:intergenic | 45.0% | |
GCAGACCCTATCTTCTAGTA+GGG | - | chr4_4:45807368-45807387 | None:intergenic | 45.0% | |
AGCAGACCCTATCTTCTAGT+AGG | - | chr4_4:45807369-45807388 | None:intergenic | 45.0% | |
TACTAGAAGATAGGGTCTGC+TGG | + | chr4_4:45807368-45807387 | Msa0683360:intron | 45.0% | |
ACTAGAAGATAGGGTCTGCT+GGG | + | chr4_4:45807369-45807388 | Msa0683360:intron | 45.0% | |
GAACAAAGGAGAAACAAGCC+AGG | + | chr4_4:45807569-45807588 | Msa0683360:intron | 45.0% | |
AAACAAGCCAGGGAGAAACA+TGG | + | chr4_4:45807580-45807599 | Msa0683360:intron | 45.0% | |
TACCCTACTTGGATTCTGGT+TGG | - | chr4_4:45807778-45807797 | None:intergenic | 45.0% | |
CATCTACCCTACTTGGATTC+TGG | - | chr4_4:45807782-45807801 | None:intergenic | 45.0% | |
GTTGCATGGAACTGAATGTC+AGG | + | chr4_4:45807891-45807910 | Msa0683360:intron | 45.0% | |
ACCAGGAATATCCTACTCAC+AGG | + | chr4_4:45807976-45807995 | Msa0683360:intron | 45.0% | |
TCCTGTGAGTAGGATATTCC+TGG | - | chr4_4:45807980-45807999 | None:intergenic | 45.0% | |
CTCACAGGAATATCCTACTC+AGG | + | chr4_4:45807991-45808010 | Msa0683360:intron | 45.0% | |
CACATTCCCACCTTCTCATA+TGG | + | chr4_4:45808140-45808159 | Msa0683360:intron | 45.0% | |
TGGGAATAAGGGAAATCACG+GGG | + | chr4_4:45808160-45808179 | Msa0683360:intron | 45.0% | |
TTCATGGGTACAAAGGTTCC+CGG | - | chr4_4:45808199-45808218 | None:intergenic | 45.0% | |
TTCCCTAGCTATGTATTCCC+GGG | + | chr4_4:45808259-45808278 | Msa0683360:intron | 45.0% | |
TTCCCGGGAATACATAGCTA+GGG | - | chr4_4:45808264-45808283 | None:intergenic | 45.0% | |
ATTCCCGGGAATACATAGCT+AGG | - | chr4_4:45808265-45808284 | None:intergenic | 45.0% | |
TCATGCGAAGAAAATCCAGG+AGG | - | chr4_4:45808830-45808849 | None:intergenic | 45.0% | |
CTCTCATGCGAAGAAAATCC+AGG | - | chr4_4:45808833-45808852 | None:intergenic | 45.0% | |
CTCTCAGCTGGAAATATTGG+TGG | + | chr4_4:45809013-45809032 | Msa0683360:CDS | 45.0% | |
!!! | GATCCTGCTATTTTGGCAGT+TGG | + | chr4_4:45809058-45809077 | Msa0683360:CDS | 45.0% |
TTGCCAACTGCCAAAATAGC+AGG | - | chr4_4:45809064-45809083 | None:intergenic | 45.0% | |
!!! | TGCTATTTTGGCAGTTGGCA+AGG | + | chr4_4:45809063-45809082 | Msa0683360:CDS | 45.0% |
!!! | GCTATTTTGGCAGTTGGCAA+GGG | + | chr4_4:45809064-45809083 | Msa0683360:CDS | 45.0% |
!!! | CTATTTTGGCAGTTGGCAAG+GGG | + | chr4_4:45809065-45809084 | Msa0683360:CDS | 45.0% |
ACAGTCAATCACTGGACGTA+CGG | + | chr4_4:45809107-45809126 | Msa0683360:CDS | 45.0% | |
TTGAGACTGATCCAACCTTG+AGG | - | chr4_4:45809278-45809297 | None:intergenic | 45.0% | |
! | GGACAGATTTTGTGCAGCTA+TGG | + | chr4_4:45809586-45809605 | Msa0683360:three_prime_UTR | 45.0% |
CTATGGATGGTACTCATGAC+TGG | + | chr4_4:45809603-45809622 | Msa0683360:three_prime_UTR | 45.0% | |
! | GATTTGCAGGTGAGCTGTTT+TGG | + | chr4_4:45809911-45809930 | Msa0683360:three_prime_UTR | 45.0% |
!! | TTTGCAGGTGAGCTGTTTTG+GGG | + | chr4_4:45809913-45809932 | Msa0683360:three_prime_UTR | 45.0% |
CCTTGTGGTATGAAGTATGG+GGG | + | chr4_4:45810111-45810130 | Msa0683360:three_prime_UTR | 45.0% | |
GAGAGAGAGAGAGAGCGATA+TGG | - | chr4_4:45801552-45801571 | None:intergenic | 50.0% | |
!! | CAGAAGTGTTGGTGCTTCAG+AGG | - | chr4_4:45802406-45802425 | None:intergenic | 50.0% |
GCACCAACACTTCTGATCGA+AGG | + | chr4_4:45802411-45802430 | Msa0683360:intron | 50.0% | |
! | ACGCCTTCGATCAGAAGTGT+TGG | - | chr4_4:45802417-45802436 | None:intergenic | 50.0% |
! | CTTCTGATCGAAGGCGTGTT+CGG | + | chr4_4:45802420-45802439 | Msa0683360:intron | 50.0% |
GCTGAGAAGGATGATACGGA+TGG | + | chr4_4:45802763-45802782 | Msa0683360:CDS | 50.0% | |
CATAAGGAGAACGACACGCA+GGG | - | chr4_4:45802795-45802814 | None:intergenic | 50.0% | |
TCATAAGGAGAACGACACGC+AGG | - | chr4_4:45802796-45802815 | None:intergenic | 50.0% | |
GGACAGCGGCAAAATGTGAA+AGG | + | chr4_4:45802833-45802852 | Msa0683360:CDS | 50.0% | |
AGTTGGATTGCCTCTGGATC+TGG | + | chr4_4:45803185-45803204 | Msa0683360:CDS | 50.0% | |
TCTTCATCTGCCAGATCCAG+AGG | - | chr4_4:45803198-45803217 | None:intergenic | 50.0% | |
GCAAGGAGTCAGATGGAGAA+AGG | - | chr4_4:45803702-45803721 | None:intergenic | 50.0% | |
GCTACTATAGCACTGCAGCA+AGG | - | chr4_4:45803719-45803738 | None:intergenic | 50.0% | |
CACTGCAGCAAGGAGTCATA+TGG | - | chr4_4:45803866-45803885 | None:intergenic | 50.0% | |
GCTACTATAGCACTGCAGCA+AGG | - | chr4_4:45803719-45803738 | None:intergenic | 50.0% | |
TCATGCATGGCTCCGAAATG+CGG | + | chr4_4:45804174-45804193 | Msa0683360:CDS | 50.0% | |
!! | AATCAGGGTTGATGCAAGGC+TGG | - | chr4_4:45804281-45804300 | None:intergenic | 50.0% |
TACCTCCTCCCCTAGATGAT+TGG | + | chr4_4:45804768-45804787 | Msa0683360:CDS | 50.0% | |
TTGGTCCAATCATCTAGGGG+AGG | - | chr4_4:45804776-45804795 | None:intergenic | 50.0% | |
!! | ACATACCAAGCAGCACTGGT+GGG | - | chr4_4:45805083-45805102 | None:intergenic | 50.0% |
! | TACATACCAAGCAGCACTGG+TGG | - | chr4_4:45805084-45805103 | None:intergenic | 50.0% |
! | TATGTGTGTTAGGGGCACAC+AGG | + | chr4_4:45805169-45805188 | Msa0683360:intron | 50.0% |
! | TGCGTGCTGTTGACTGTATC+AGG | - | chr4_4:45805257-45805276 | None:intergenic | 50.0% |
!! | TTTGGCTTGGACAGGACAGA+GGG | - | chr4_4:45805281-45805300 | None:intergenic | 50.0% |
!!! | TTTTGGCTTGGACAGGACAG+AGG | - | chr4_4:45805282-45805301 | None:intergenic | 50.0% |
CCCCGTAACAGCAGTAGAAA+AGG | - | chr4_4:45805330-45805349 | None:intergenic | 50.0% | |
GCTTCTGCAGCACAATGTGA+TGG | + | chr4_4:45805359-45805378 | Msa0683360:CDS | 50.0% | |
GGCATTTCACTCTTCACCCT+TGG | - | chr4_4:45805428-45805447 | None:intergenic | 50.0% | |
!! | TTCTTTTTGCACCGGTCCAG+AGG | + | chr4_4:45805637-45805656 | Msa0683360:CDS | 50.0% |
AGTCCAAAGGAACAGTGTGG+AGG | + | chr4_4:45805854-45805873 | Msa0683360:CDS | 50.0% | |
GTCCAAAGGAACAGTGTGGA+GGG | + | chr4_4:45805855-45805874 | Msa0683360:CDS | 50.0% | |
ATCCCTCCACACTGTTCCTT+TGG | - | chr4_4:45805860-45805879 | None:intergenic | 50.0% | |
GGAACAGTGTGGAGGGATAT+TGG | + | chr4_4:45805862-45805881 | Msa0683360:CDS | 50.0% | |
CTGCCACCGATCAATTTCTC+AGG | - | chr4_4:45806154-45806173 | None:intergenic | 50.0% | |
! | TTGATCGGTGGCAGCTCTAA+TGG | + | chr4_4:45806160-45806179 | Msa0683360:CDS | 50.0% |
!! | GGAAGGTTAGTTGGTGATGC+TGG | + | chr4_4:45806217-45806236 | Msa0683360:CDS | 50.0% |
!! | TGTCCCTCGATTTTGATCCC+TGG | + | chr4_4:45806290-45806309 | Msa0683360:CDS | 50.0% |
!! | GTCCCTCGATTTTGATCCCT+GGG | + | chr4_4:45806291-45806310 | Msa0683360:CDS | 50.0% |
CATCCCAGGGATCAAAATCG+AGG | - | chr4_4:45806297-45806316 | None:intergenic | 50.0% | |
GACGTTAAGGAGTCATCCCA+GGG | - | chr4_4:45806310-45806329 | None:intergenic | 50.0% | |
TGACGTTAAGGAGTCATCCC+AGG | - | chr4_4:45806311-45806330 | None:intergenic | 50.0% | |
CATCAATGAAACCCATGCGC+AGG | - | chr4_4:45807158-45807177 | None:intergenic | 50.0% | |
GCGCATGGGTTTCATTGATG+TGG | + | chr4_4:45807158-45807177 | Msa0683360:intron | 50.0% | |
GGGAAACACCTACCAGAAGA+TGG | + | chr4_4:45807313-45807332 | Msa0683360:intron | 50.0% | |
GGGGGGATAACAGAGCAATA+CGG | + | chr4_4:45807393-45807412 | Msa0683360:intron | 50.0% | |
GGGGGATAACAGAGCAATAC+GGG | + | chr4_4:45807394-45807413 | Msa0683360:intron | 50.0% | |
GGGGATAACAGAGCAATACG+GGG | + | chr4_4:45807395-45807414 | Msa0683360:intron | 50.0% | |
GGGATAACAGAGCAATACGG+GGG | + | chr4_4:45807396-45807415 | Msa0683360:intron | 50.0% | |
GGATAACAGAGCAATACGGG+GGG | + | chr4_4:45807397-45807416 | Msa0683360:intron | 50.0% | |
CCACGTCCTTGATTGCTTGA+GGG | - | chr4_4:45807437-45807456 | None:intergenic | 50.0% | |
ACCACGTCCTTGATTGCTTG+AGG | - | chr4_4:45807438-45807457 | None:intergenic | 50.0% | |
ACGGGGAGTTACTTCATTCC+CGG | + | chr4_4:45808177-45808196 | Msa0683360:intron | 50.0% | |
TCATGGGTACAAAGGTTCCC+GGG | - | chr4_4:45808198-45808217 | None:intergenic | 50.0% | |
GAAAAGGTTGACAGCAAGCC+AGG | - | chr4_4:45808343-45808362 | None:intergenic | 50.0% | |
ATCAGATGAGCTGAGACAGC+TGG | - | chr4_4:45808722-45808741 | None:intergenic | 50.0% | |
TCACAAGTTTCAGCTCCACC+AGG | + | chr4_4:45808779-45808798 | Msa0683360:CDS | 50.0% | |
TGCGAAGAAAATCCAGGAGG+TGG | - | chr4_4:45808827-45808846 | None:intergenic | 50.0% | |
!! | TTTCCAGCTGAGAGTGTCTG+AGG | - | chr4_4:45809007-45809026 | None:intergenic | 50.0% |
! | GCTGGAAATATTGGTGGCAC+AGG | + | chr4_4:45809019-45809038 | Msa0683360:CDS | 50.0% |
ACAACTGAGGATAAGGGGCT+AGG | - | chr4_4:45809309-45809328 | None:intergenic | 50.0% | |
GACTGCTGCATAGACAACTG+AGG | - | chr4_4:45809322-45809341 | None:intergenic | 50.0% | |
CAAATGGCCAATGGAATGGG+TGG | + | chr4_4:45809359-45809378 | Msa0683360:CDS | 50.0% | |
CCTCATTCCACCCATTCCAT+TGG | - | chr4_4:45809369-45809388 | None:intergenic | 50.0% | |
CCAATGGAATGGGTGGAATG+AGG | + | chr4_4:45809366-45809385 | Msa0683360:CDS | 50.0% | |
AATGAGGTGCAGAGTGGGAA+TGG | + | chr4_4:45809382-45809401 | Msa0683360:CDS | 50.0% | |
! | ACCTGGTGCCAAAACGAGAA+TGG | + | chr4_4:45809768-45809787 | Msa0683360:three_prime_UTR | 50.0% |
!! | TCCATTCTCGTTTTGGCACC+AGG | - | chr4_4:45809772-45809791 | None:intergenic | 50.0% |
CCCCCATACTTCATACCACA+AGG | - | chr4_4:45810114-45810133 | None:intergenic | 50.0% | |
! | GAGAGAGAAAGCGCACCTCA+GGG | - | chr4_4:45801524-45801543 | None:intergenic | 55.0% |
! | AGAGAGAGAAAGCGCACCTC+AGG | - | chr4_4:45801525-45801544 | None:intergenic | 55.0% |
TCCTCTCTGTGCCGAAGAGA+TGG | + | chr4_4:45802229-45802248 | Msa0683360:CDS | 55.0% | |
TCCATCTCTTCGGCACAGAG+AGG | - | chr4_4:45802233-45802252 | None:intergenic | 55.0% | |
CACTGCAGCAAGGAGTCAGA+TGG | - | chr4_4:45803709-45803728 | None:intergenic | 55.0% | |
! | GGTTGATGCAAGGCTGGTCA+CGG | - | chr4_4:45804275-45804294 | None:intergenic | 55.0% |
AACAGTATGCAACGGCGGTC+AGG | + | chr4_4:45804737-45804756 | Msa0683360:CDS | 55.0% | |
ACAGTATGCAACGGCGGTCA+GGG | + | chr4_4:45804738-45804757 | Msa0683360:CDS | 55.0% | |
GTCCAATCATCTAGGGGAGG+AGG | - | chr4_4:45804773-45804792 | None:intergenic | 55.0% | |
ACAAGTTGTCAGCCCCCTGT+TGG | + | chr4_4:45805194-45805213 | Msa0683360:CDS | 55.0% | |
!! | TTTGGCTTGGACGGCACAGA+GGG | - | chr4_4:45805233-45805252 | None:intergenic | 55.0% |
!!! | TTTTGGCTTGGACGGCACAG+AGG | - | chr4_4:45805234-45805253 | None:intergenic | 55.0% |
TGCTGTTACGGGGACGATTC+AGG | + | chr4_4:45805337-45805356 | Msa0683360:CDS | 55.0% | |
CCGTATCACTTCCTCTGGAC+CGG | - | chr4_4:45805651-45805670 | None:intergenic | 55.0% | |
CCGGTCCAGAGGAAGTGATA+CGG | + | chr4_4:45805648-45805667 | Msa0683360:CDS | 55.0% | |
TGTGACTCTTAGGCTGGTGC+TGG | - | chr4_4:45806504-45806523 | None:intergenic | 55.0% | |
AGAAGATAGGGTCTGCTGGG+TGG | + | chr4_4:45807372-45807391 | Msa0683360:intron | 55.0% | |
GAAGATAGGGTCTGCTGGGT+GGG | + | chr4_4:45807373-45807392 | Msa0683360:intron | 55.0% | |
AAGATAGGGTCTGCTGGGTG+GGG | + | chr4_4:45807374-45807393 | Msa0683360:intron | 55.0% | |
AACAGAGCAATACGGGGGGA+TGG | + | chr4_4:45807401-45807420 | Msa0683360:intron | 55.0% | |
GCTGCACCCTCAAGCAATCA+AGG | + | chr4_4:45807428-45807447 | Msa0683360:intron | 55.0% | |
CCCTCAAGCAATCAAGGACG+TGG | + | chr4_4:45807434-45807453 | Msa0683360:intron | 55.0% | |
!! | AAGGACGTGGTGTCGCAACT+AGG | + | chr4_4:45807447-45807466 | Msa0683360:intron | 55.0% |
!! | AGGACGTGGTGTCGCAACTA+GGG | + | chr4_4:45807448-45807467 | Msa0683360:intron | 55.0% |
CGGGGAGTTACTTCATTCCC+GGG | + | chr4_4:45808178-45808197 | Msa0683360:intron | 55.0% | |
TCACCTCAGACACTCTCAGC+TGG | + | chr4_4:45809001-45809020 | Msa0683360:CDS | 55.0% | |
GTTGGCAAGGGGAGACTTCA+AGG | + | chr4_4:45809076-45809095 | Msa0683360:CDS | 55.0% | |
GGTGGAATGAGGTGCAGAGT+GGG | + | chr4_4:45809377-45809396 | Msa0683360:CDS | 55.0% | |
GTGCAGAGTGGGAATGGTCT+GGG | + | chr4_4:45809388-45809407 | Msa0683360:CDS | 55.0% | |
! | TGGGTGTGGCCGAACTTTTG+AGG | + | chr4_4:45809407-45809426 | Msa0683360:CDS | 55.0% |
TCAATGTCACGGACGGCAGC+TGG | + | chr4_4:45803359-45803378 | Msa0683360:CDS | 60.0% | |
! | CTCTTCCCACCAGTGCTGCT+TGG | + | chr4_4:45805075-45805094 | Msa0683360:CDS | 60.0% |
AGTTGTCAGCCCCCTGTTGG+AGG | + | chr4_4:45805197-45805216 | Msa0683360:CDS | 60.0% | |
GCAAGCATGGCCGATCTCTC+TGG | - | chr4_4:45807051-45807070 | None:intergenic | 60.0% | |
AGATAGGGTCTGCTGGGTGG+GGG | + | chr4_4:45807375-45807394 | Msa0683360:intron | 60.0% | |
GGGTGGAATGAGGTGCAGAG+TGG | + | chr4_4:45809376-45809395 | Msa0683360:CDS | 60.0% | |
GGTGCAGAGTGGGAATGGTC+TGG | + | chr4_4:45809387-45809406 | Msa0683360:CDS | 60.0% | |
GAGTGGGAATGGTCTGGGTG+TGG | + | chr4_4:45809393-45809412 | Msa0683360:CDS | 60.0% | |
GATAGGGTCTGCTGGGTGGG+GGG | + | chr4_4:45807376-45807395 | Msa0683360:intron | 65.0% | |
CCAGGAGGTGGAAGCCTGCT+TGG | - | chr4_4:45808815-45808834 | None:intergenic | 65.0% | |
CCAAGCAGGCTTCCACCTCC+TGG | + | chr4_4:45808812-45808831 | Msa0683360:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 45801458 | 45810143 | 45801458 | ID=Msa0683360;Name=Msa0683360 |
chr4_4 | mRNA | 45801458 | 45810143 | 45801458 | ID=Msa0683360-mRNA-1;Parent=Msa0683360;Name=Msa0683360-mRNA-1;_AED=0.07;_eAED=0.07;_QI=213|1|1|1|0.91|0.92|13|612|1027 |
chr4_4 | exon | 45801458 | 45801652 | 45801458 | ID=Msa0683360-mRNA-1:exon:11220;Parent=Msa0683360-mRNA-1 |
chr4_4 | exon | 45802185 | 45802295 | 45802185 | ID=Msa0683360-mRNA-1:exon:11221;Parent=Msa0683360-mRNA-1 |
chr4_4 | exon | 45802727 | 45802854 | 45802727 | ID=Msa0683360-mRNA-1:exon:11222;Parent=Msa0683360-mRNA-1 |
chr4_4 | exon | 45803065 | 45803218 | 45803065 | ID=Msa0683360-mRNA-1:exon:11223;Parent=Msa0683360-mRNA-1 |
chr4_4 | exon | 45803308 | 45803417 | 45803308 | ID=Msa0683360-mRNA-1:exon:11224;Parent=Msa0683360-mRNA-1 |
chr4_4 | exon | 45803971 | 45804054 | 45803971 | ID=Msa0683360-mRNA-1:exon:11225;Parent=Msa0683360-mRNA-1 |
chr4_4 | exon | 45804147 | 45804195 | 45804147 | ID=Msa0683360-mRNA-1:exon:11226;Parent=Msa0683360-mRNA-1 |
chr4_4 | exon | 45804282 | 45804373 | 45804282 | ID=Msa0683360-mRNA-1:exon:11227;Parent=Msa0683360-mRNA-1 |
chr4_4 | exon | 45804706 | 45804835 | 45804706 | ID=Msa0683360-mRNA-1:exon:11228;Parent=Msa0683360-mRNA-1 |
chr4_4 | exon | 45805017 | 45805096 | 45805017 | ID=Msa0683360-mRNA-1:exon:11229;Parent=Msa0683360-mRNA-1 |
chr4_4 | exon | 45805181 | 45806661 | 45805181 | ID=Msa0683360-mRNA-1:exon:11230;Parent=Msa0683360-mRNA-1 |
chr4_4 | exon | 45808768 | 45808881 | 45808768 | ID=Msa0683360-mRNA-1:exon:11231;Parent=Msa0683360-mRNA-1 |
chr4_4 | exon | 45808963 | 45810143 | 45808963 | ID=Msa0683360-mRNA-1:exon:11232;Parent=Msa0683360-mRNA-1 |
chr4_4 | five_prime_UTR | 45801458 | 45801652 | 45801458 | ID=Msa0683360-mRNA-1:five_prime_utr;Parent=Msa0683360-mRNA-1 |
chr4_4 | five_prime_UTR | 45802185 | 45802202 | 45802185 | ID=Msa0683360-mRNA-1:five_prime_utr;Parent=Msa0683360-mRNA-1 |
chr4_4 | CDS | 45802203 | 45802295 | 45802203 | ID=Msa0683360-mRNA-1:cds;Parent=Msa0683360-mRNA-1 |
chr4_4 | CDS | 45802727 | 45802854 | 45802727 | ID=Msa0683360-mRNA-1:cds;Parent=Msa0683360-mRNA-1 |
chr4_4 | CDS | 45803065 | 45803218 | 45803065 | ID=Msa0683360-mRNA-1:cds;Parent=Msa0683360-mRNA-1 |
chr4_4 | CDS | 45803308 | 45803417 | 45803308 | ID=Msa0683360-mRNA-1:cds;Parent=Msa0683360-mRNA-1 |
chr4_4 | CDS | 45803971 | 45804054 | 45803971 | ID=Msa0683360-mRNA-1:cds;Parent=Msa0683360-mRNA-1 |
chr4_4 | CDS | 45804147 | 45804195 | 45804147 | ID=Msa0683360-mRNA-1:cds;Parent=Msa0683360-mRNA-1 |
chr4_4 | CDS | 45804282 | 45804373 | 45804282 | ID=Msa0683360-mRNA-1:cds;Parent=Msa0683360-mRNA-1 |
chr4_4 | CDS | 45804706 | 45804835 | 45804706 | ID=Msa0683360-mRNA-1:cds;Parent=Msa0683360-mRNA-1 |
chr4_4 | CDS | 45805017 | 45805096 | 45805017 | ID=Msa0683360-mRNA-1:cds;Parent=Msa0683360-mRNA-1 |
chr4_4 | CDS | 45805181 | 45806661 | 45805181 | ID=Msa0683360-mRNA-1:cds;Parent=Msa0683360-mRNA-1 |
chr4_4 | CDS | 45808768 | 45808881 | 45808768 | ID=Msa0683360-mRNA-1:cds;Parent=Msa0683360-mRNA-1 |
chr4_4 | CDS | 45808963 | 45809531 | 45808963 | ID=Msa0683360-mRNA-1:cds;Parent=Msa0683360-mRNA-1 |
chr4_4 | three_prime_UTR | 45809532 | 45810143 | 45809532 | ID=Msa0683360-mRNA-1:three_prime_utr;Parent=Msa0683360-mRNA-1 |
Gene Sequence |
Protein sequence |