Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0602570 | XP_039689583.1 | 92.658 | 1076 | 36 | 3 | 1 | 1076 | 1 | 1033 | 0.0 | 2038 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0602570 | sp|Q8BT14|CNOT4_MOUSE | 36.986 | 292 | 133 | 6 | 9 | 295 | 14 | 259 | 7.04e-53 | 199 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0602570 | A0A396I5D0 | 91.805 | 1086 | 36 | 4 | 1 | 1076 | 1 | 1043 | 0.0 | 2031 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0167210 | Msa0602570 | 0.801736 | 7.821120e-49 | -8.615850e-47 |
Msa0259860 | Msa0602570 | 0.808793 | 2.600897e-50 | -8.615850e-47 |
Msa0602570 | Msa0683360 | 0.806234 | 9.082663e-50 | -8.615850e-47 |
Msa0602570 | Msa0717920 | 0.804833 | 1.786478e-49 | -8.615850e-47 |
Msa0602570 | Msa0813320 | 0.803629 | 3.181766e-49 | -8.615850e-47 |
Msa0602570 | Msa0867050 | 0.802153 | 6.421142e-49 | -8.615850e-47 |
Msa0602570 | Msa1307660 | 0.811724 | 6.067832e-51 | -8.615850e-47 |
Msa0602570 | Msa1396750 | 0.829107 | 6.194108e-55 | -8.615850e-47 |
Msa0602570 | Msa1410430 | 0.808079 | 3.693905e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0602570 | MtrunA17_Chr4g0030181 | 91.805 | 1086 | 36 | 4 | 1 | 1076 | 1 | 1043 | 0.0 | 2031 |
Msa0602570 | MtrunA17_Chr2g0325921 | 60.882 | 1089 | 330 | 18 | 1 | 1076 | 1 | 1006 | 0.0 | 1227 |
Msa0602570 | MtrunA17_Chr1g0181751 | 58.790 | 347 | 99 | 5 | 1 | 346 | 1 | 304 | 1.06e-126 | 409 |
Msa0602570 | MtrunA17_Chr1g0181751 | 38.082 | 365 | 199 | 14 | 705 | 1065 | 567 | 908 | 2.39e-49 | 189 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0602570 | AT3G45630.2 | 44.922 | 1093 | 481 | 29 | 1 | 1076 | 1 | 989 | 0.0 | 776 |
Msa0602570 | AT3G45630.1 | 44.922 | 1093 | 481 | 29 | 1 | 1076 | 1 | 989 | 0.0 | 776 |
Msa0602570 | AT5G60170.2 | 43.739 | 1102 | 479 | 30 | 1 | 1076 | 1 | 987 | 0.0 | 763 |
Msa0602570 | AT5G60170.1 | 43.557 | 1102 | 479 | 31 | 1 | 1076 | 1 | 985 | 0.0 | 755 |
Msa0602570 | AT2G28540.1 | 54.545 | 396 | 119 | 6 | 1 | 395 | 1 | 336 | 2.63e-141 | 447 |
Msa0602570 | AT2G28540.2 | 54.545 | 396 | 119 | 6 | 1 | 395 | 1 | 336 | 1.95e-140 | 447 |
Msa0602570 | AT3G48070.1 | 42.857 | 63 | 30 | 1 | 8 | 70 | 243 | 299 | 2.00e-11 | 67.0 |
Msa0602570 | AT5G62910.1 | 43.103 | 58 | 27 | 1 | 8 | 65 | 251 | 302 | 2.89e-11 | 66.6 |
Msa0602570 | AT5G62910.2 | 43.103 | 58 | 27 | 1 | 8 | 65 | 251 | 302 | 2.89e-11 | 66.6 |
Msa0602570 | AT3G48070.2 | 42.857 | 63 | 30 | 1 | 8 | 70 | 243 | 299 | 3.72e-11 | 66.6 |
Msa0602570 | AT3G48070.3 | 42.857 | 63 | 30 | 1 | 8 | 70 | 194 | 250 | 4.29e-11 | 65.9 |
Find 271 sgRNAs with CRISPR-Local
Find 645 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACCTTAGATTTCCTGAAAT+TGG | 0.060258 | 4_2:+46275621 | Msa0602570:CDS |
GCTTCTTCCAACAAGCTTTC+TGG | 0.145083 | 4_2:+46273068 | Msa0602570:CDS |
CACAGGCGAAATTGAATTTA+TGG | 0.174838 | 4_2:+46275443 | Msa0602570:CDS |
ATTTATGGATCCTGCTATTT+TGG | 0.179669 | 4_2:+46275458 | Msa0602570:CDS |
CTGTTGACTGTATCAGATTT+TGG | 0.200603 | 4_2:-46271691 | None:intergenic |
GATTTGCAGGTGAGCTGTTT+TGG | 0.206336 | 4_2:+46276318 | Msa0602570:three_prime_UTR |
TCACCTCCAAATGGAATTAA+TGG | 0.240073 | 4_2:+46271436 | Msa0602570:CDS |
GAATCTCAAATTCAATCTTT+TGG | 0.241208 | 4_2:+46272882 | Msa0602570:CDS |
CCGGCTGTATTGGTTGTTAT+CGG | 0.244156 | 4_2:-46272216 | None:intergenic |
GGTACTCATGACTGGTATAT+TGG | 0.245289 | 4_2:+46276018 | Msa0602570:three_prime_UTR |
TATCCTTGTGGTATGAAGTA+TGG | 0.245430 | 4_2:+46276547 | Msa0602570:three_prime_UTR |
CAGCCATAAATTACACTTCT+TGG | 0.255963 | 4_2:-46276058 | None:intergenic |
ATATATTGTTTAACAGATTT+CGG | 0.262309 | 4_2:-46271841 | None:intergenic |
ATCCCAAGAAGTGTAATTTA+TGG | 0.269085 | 4_2:+46276055 | Msa0602570:three_prime_UTR |
AAATGTACACGGATTTGTTT+TGG | 0.271434 | 4_2:+46270411 | Msa0602570:CDS |
CATTGGCCATTTGACAAGAT+TGG | 0.278280 | 4_2:-46275756 | None:intergenic |
CTGCAAATCCAGAACTAAAA+AGG | 0.286465 | 4_2:-46276304 | None:intergenic |
TGAAATGAATTTGGAGAAAA+AGG | 0.287175 | 4_2:+46269444 | Msa0602570:CDS |
GTTTGACCCAAATAGTTAAA+AGG | 0.288368 | 4_2:+46276572 | Msa0602570:three_prime_UTR |
AGCAGATATGTGTACCTTAA+AGG | 0.295462 | 4_2:-46270442 | None:intergenic |
CGAAACCTTGTTTACATAGT+TGG | 0.297705 | 4_2:+46269538 | Msa0602570:CDS |
CTCCAGAAGCGAGAGTATTT+TGG | 0.299226 | 4_2:+46269706 | Msa0602570:CDS |
TGCTGTTACGGGGACGATTC+AGG | 0.299403 | 4_2:+46271732 | Msa0602570:CDS |
TTGGTTAAATTGGATTAATA+TGG | 0.305560 | 4_2:+46276113 | Msa0602570:three_prime_UTR |
TTCAGCTTCCTCAAAGTTAC+TGG | 0.311605 | 4_2:-46273021 | None:intergenic |
CTGTTGACTGTATCAGGTTT+TGG | 0.312082 | 4_2:-46271643 | None:intergenic |
TTAAATGCTACTAACATTAC+TGG | 0.313862 | 4_2:+46272006 | Msa0602570:CDS |
ACTGCTGAATGAAATGAATT+TGG | 0.320971 | 4_2:+46269435 | Msa0602570:CDS |
GATATCTACAACAGAACATT+TGG | 0.326142 | 4_2:+46275909 | Msa0602570:CDS |
GGTGATGCTGGGTGTGATGC+TGG | 0.331077 | 4_2:+46272645 | Msa0602570:CDS |
GACCAAAATACTCTCGCTTC+TGG | 0.331323 | 4_2:-46269708 | None:intergenic |
GGAACAGTGTGGAGGGATAT+TGG | 0.333843 | 4_2:+46272278 | Msa0602570:CDS |
GCATAATATAGTGAAGTTAT+TGG | 0.334033 | 4_2:+46272761 | Msa0602570:CDS |
GTGCTAGAGTTCTTTGCATT+AGG | 0.340231 | 4_2:-46275590 | None:intergenic |
ATTAAGGAAATTTGTTGCCT+TGG | 0.340363 | 4_2:-46272406 | None:intergenic |
ACACTCTCAGCTGGAAATAT+TGG | 0.344375 | 4_2:+46275417 | Msa0602570:CDS |
GTATGTTTCAGGGCATGTTT+TGG | 0.345767 | 4_2:+46270531 | Msa0602570:intron |
TCCCAATTTCAGGAAATCTA+AGG | 0.348059 | 4_2:-46275623 | None:intergenic |
GGAAGGTTAGTTGGTGATGC+TGG | 0.349300 | 4_2:+46272633 | Msa0602570:CDS |
TTTGATCATGTTAGCATTGA+CGG | 0.349698 | 4_2:-46276347 | None:intergenic |
AGAGAGAAGAAGGTGCTGTT+TGG | 0.350051 | 4_2:-46267881 | None:intergenic |
TGCGTGCTGTTGACTGTATC+AGG | 0.352665 | 4_2:-46271649 | None:intergenic |
TTGATCGGTGGCAGCTCTAA+TGG | 0.352881 | 4_2:+46272576 | Msa0602570:CDS |
TCACATACTCAATCAGAATC+TGG | 0.354282 | 4_2:+46272947 | Msa0602570:CDS |
AAAACTTCCACACCAGTTAA+TGG | 0.354286 | 4_2:+46272240 | Msa0602570:CDS |
ATCCCTCCACACTGTTCCTT+TGG | 0.359314 | 4_2:-46272273 | None:intergenic |
ATGGTAAAACCTGGCAGAAA+TGG | 0.361766 | 4_2:+46275972 | Msa0602570:three_prime_UTR |
ACCTTAGATTTCCTGAAATT+GGG | 0.364158 | 4_2:+46275622 | Msa0602570:CDS |
TGTCTCCCATTAATTCCATT+TGG | 0.368769 | 4_2:-46271442 | None:intergenic |
TCTCAACTTGGTGATTCATA+TGG | 0.374510 | 4_2:+46275654 | Msa0602570:CDS |
TCGTGCAAATATAGACAATC+AGG | 0.375610 | 4_2:-46270689 | None:intergenic |
AACAGTATGCAACGGCGGTC+AGG | 0.378191 | 4_2:+46271132 | Msa0602570:CDS |
CACTTCTTGGGATCATCATT+AGG | 0.385233 | 4_2:-46276045 | None:intergenic |
CTGAGGTGAATTTCTCAAAA+AGG | 0.386624 | 4_2:-46275394 | None:intergenic |
GAAAATACAACTAACCAGAT+AGG | 0.387188 | 4_2:-46275282 | None:intergenic |
TACACACTGCAAGTTTCATT+AGG | 0.393770 | 4_2:-46269793 | None:intergenic |
ATCTTCCAATGATAGAGTTC+GGG | 0.395042 | 4_2:+46272500 | Msa0602570:CDS |
CATAATATAGTGAAGTTATT+GGG | 0.396539 | 4_2:+46272762 | Msa0602570:CDS |
CAAATTCCGTATCACTTCAT+TGG | 0.398093 | 4_2:-46272070 | None:intergenic |
TTAAGGAAATTTGTTGCCTT+GGG | 0.399746 | 4_2:-46272405 | None:intergenic |
TTACATAGTTGGATTGCCTC+TGG | 0.401908 | 4_2:+46269549 | Msa0602570:CDS |
TTTAAAAGAGAGAGAGAAGA+AGG | 0.402797 | 4_2:-46267891 | None:intergenic |
TAAAGAACGAGTTGTCTTCT+CGG | 0.403477 | 4_2:+46271935 | Msa0602570:CDS |
TGCATAGACAACTGAGGATA+AGG | 0.403516 | 4_2:-46275720 | None:intergenic |
ATATGATTAAAGACTCTCTA+AGG | 0.403904 | 4_2:-46269666 | None:intergenic |
TTGTAGATATCTCCAGAGTT+TGG | 0.406565 | 4_2:-46275897 | None:intergenic |
GAGAGAAAGAGAGAGCGATA+TGG | 0.409356 | 4_2:-46267946 | None:intergenic |
TGATTGAGTATGTGACTCTT+AGG | 0.409553 | 4_2:-46272939 | None:intergenic |
TATCTTCCAATGATAGAGTT+CGG | 0.410594 | 4_2:+46272499 | Msa0602570:CDS |
CGGCTGTATTGGTTGTTATC+GGG | 0.414934 | 4_2:-46272215 | None:intergenic |
TTCTTTAAATTGACAGGCAC+AGG | 0.415228 | 4_2:-46271919 | None:intergenic |
AGTTGGATTGCCTCTGGATC+TGG | 0.415860 | 4_2:+46269555 | Msa0602570:CDS |
GTACTCATGACTGGTATATT+GGG | 0.415880 | 4_2:+46276019 | Msa0602570:three_prime_UTR |
TACCTCCTCCCCTAGATGAT+TGG | 0.421395 | 4_2:+46271163 | Msa0602570:CDS |
TATATTATGCGGTGACGTTA+AGG | 0.425682 | 4_2:-46272748 | None:intergenic |
CCAAGCAGGCTTCCACCTCC+TGG | 0.427554 | 4_2:+46275220 | Msa0602570:CDS |
CAAAGCATTGGAAGGTTAGT+TGG | 0.427898 | 4_2:+46272624 | Msa0602570:CDS |
TACAGAGAATGAAAACTTGT+TGG | 0.428178 | 4_2:+46276440 | Msa0602570:intron |
TATGACAAGGAAAAGATTGT+TGG | 0.433396 | 4_2:+46269181 | Msa0602570:CDS |
TGTCTATATTTGCACGAGGT+TGG | 0.433909 | 4_2:+46270695 | Msa0602570:CDS |
CTTTCCTACCAGTAACTTTG+AGG | 0.434334 | 4_2:+46273013 | Msa0602570:CDS |
TCTTTCATTCCTCAAAAGTT+CGG | 0.434397 | 4_2:-46275823 | None:intergenic |
GGCGCAGAGTGGGAATGGTC+TGG | 0.435917 | 4_2:+46275794 | Msa0602570:CDS |
GCATAGACAACTGAGGATAA+GGG | 0.437992 | 4_2:-46275719 | None:intergenic |
CACCTCCAAATGGAATTAAT+GGG | 0.438030 | 4_2:+46271437 | Msa0602570:CDS |
AACTCGTTCTTTAAATTGAC+AGG | 0.438428 | 4_2:-46271925 | None:intergenic |
CTCTTCCCACCAGTGCTGCT+TGG | 0.439317 | 4_2:+46271470 | Msa0602570:CDS |
AGCCATAAATTACACTTCTT+GGG | 0.439402 | 4_2:-46276057 | None:intergenic |
ATCCTTGTGGTATGAAGTAT+GGG | 0.439572 | 4_2:+46276548 | Msa0602570:three_prime_UTR |
CCAGGAGGTGGAAGCCTGCT+TGG | 0.445404 | 4_2:-46275220 | None:intergenic |
AATTATTGGTCCAATCATCT+AGG | 0.446433 | 4_2:-46271173 | None:intergenic |
GGCATTTCACTCTTCACCCT+TGG | 0.447702 | 4_2:-46271820 | None:intergenic |
TTAGCAGTGGATTAGCGTCT+TGG | 0.450081 | 4_2:+46276602 | Msa0602570:three_prime_UTR |
AGAGAGAGAAAGCGCACCAC+AGG | 0.450247 | 4_2:-46267921 | None:intergenic |
TTCATCCCGAACTCTATCAT+TGG | 0.451494 | 4_2:-46272505 | None:intergenic |
TCCTCTCTGTGCTGAAGAGA+TGG | 0.454177 | 4_2:+46268599 | Msa0602570:CDS |
CAGCACAATGTGATGGTTCA+AGG | 0.454403 | 4_2:+46271761 | Msa0602570:CDS |
GGATGTGATAAACCTCCAAC+AGG | 0.456167 | 4_2:-46271604 | None:intergenic |
AGCCCTTGTCTAATGCAGTA+TGG | 0.458876 | 4_2:+46272444 | Msa0602570:CDS |
TACTTCGTGATGAAAGAAAC+AGG | 0.459556 | 4_2:+46272601 | Msa0602570:CDS |
GATATGATGATTCAAAATAT+CGG | 0.463500 | 4_2:+46275871 | Msa0602570:CDS |
GTGTGATGCTGCTATTGATA+AGG | 0.464608 | 4_2:+46272668 | Msa0602570:CDS |
CCTCATTCCACCCATTCCAT+TGG | 0.464851 | 4_2:-46275773 | None:intergenic |
ATATATTAGCATGGACAGTC+TGG | 0.464890 | 4_2:+46271858 | Msa0602570:CDS |
ACAAATCCAATCTTGTCAAA+TGG | 0.464962 | 4_2:+46275750 | Msa0602570:CDS |
ATATGGTATTTCCTCAAGGT+TGG | 0.466637 | 4_2:+46275671 | Msa0602570:CDS |
AGGGAAATCATGAGTGATGA+AGG | 0.467043 | 4_2:+46268564 | Msa0602570:exon |
GTTGGCAAGGGGAGACTTCA+AGG | 0.470588 | 4_2:+46275483 | Msa0602570:CDS |
CCCCGTAACAGCAGTAGAAA+AGG | 0.472096 | 4_2:-46271722 | None:intergenic |
GTAGCAGACACTGCTTCCTC+TGG | 0.472376 | 4_2:-46272048 | None:intergenic |
ATACTCACCAGAAAGCTTGT+TGG | 0.472472 | 4_2:-46273075 | None:intergenic |
GATATGAATTATTATTATGA+TGG | 0.474961 | 4_2:-46267853 | None:intergenic |
GAAGGTTAGTTGGTGATGCT+GGG | 0.478133 | 4_2:+46272634 | Msa0602570:CDS |
CTCCCATTAATTCCATTTGG+AGG | 0.480285 | 4_2:-46271439 | None:intergenic |
ATGACAAGGAAAAGATTGTT+GGG | 0.480597 | 4_2:+46269182 | Msa0602570:CDS |
CGACTCTCATCATTCAATAG+TGG | 0.484165 | 4_2:-46271787 | None:intergenic |
ATTATTGGTCCAATCATCTA+GGG | 0.486060 | 4_2:-46271172 | None:intergenic |
CTTGATTGCAGATCTGTGTA+TGG | 0.488405 | 4_2:+46269086 | Msa0602570:intron |
GCGCAGAGTGGGAATGGTCT+GGG | 0.490478 | 4_2:+46275795 | Msa0602570:CDS |
GTGATGCTGGGTGTGATGCT+GGG | 0.491798 | 4_2:+46272646 | Msa0602570:CDS |
TATTCAGTAGGCAGGCTACT+AGG | 0.493023 | 4_2:-46272129 | None:intergenic |
TATGGTGAACCTTGTACTGC+TGG | 0.494515 | 4_2:+46272462 | Msa0602570:CDS |
ACCTGGTGACAAAACGAGAA+TGG | 0.495161 | 4_2:+46276175 | Msa0602570:three_prime_UTR |
AAATATCGGATGCCAAACTC+TGG | 0.498643 | 4_2:+46275885 | Msa0602570:CDS |
TTGCCAACTGCCAAAATAGC+AGG | 0.498652 | 4_2:-46275468 | None:intergenic |
ACCTTGCAGATGTGGTTATG+AGG | 0.499084 | 4_2:+46268644 | Msa0602570:CDS |
GCCAAGTCTAAATCTTCTGA+TGG | 0.500557 | 4_2:+46269481 | Msa0602570:CDS |
GAGAAGTTGGGCATAGCAAA+TGG | 0.501740 | 4_2:+46272990 | Msa0602570:CDS |
TGTGACTCTTAGGCTGGTGC+TGG | 0.502905 | 4_2:-46272929 | None:intergenic |
CTGCCACCGATCAATTTCTC+AGG | 0.504791 | 4_2:-46272567 | None:intergenic |
TCAATGTCACGGACGGCAGC+TGG | 0.505325 | 4_2:+46269754 | Msa0602570:CDS |
AAATAAGAAAGACAAACTTC+TGG | 0.505500 | 4_2:-46272381 | None:intergenic |
TGTTGTGTTAATGTCGGAAA+TGG | 0.509256 | 4_2:+46275953 | Msa0602570:three_prime_UTR |
CATAATGGACATGGCTGAGA+AGG | 0.510522 | 4_2:+46269120 | Msa0602570:CDS |
TTTGAGGAAGCTGAAAGTAT+AGG | 0.512246 | 4_2:+46273029 | Msa0602570:CDS |
TCAAGACATATTCAGTAGGC+AGG | 0.516346 | 4_2:-46272137 | None:intergenic |
CAAACGAAGAGGAATCAATT+CGG | 0.517332 | 4_2:+46270380 | Msa0602570:CDS |
CTCTCATGCGAAGAAAATCC+AGG | 0.520083 | 4_2:-46275238 | None:intergenic |
ACATCATTTCCAGCAGTACA+AGG | 0.520778 | 4_2:-46272471 | None:intergenic |
CAGTTGAAACCTTGCAGATG+TGG | 0.520917 | 4_2:+46268636 | Msa0602570:CDS |
TTGTCAAATGGCCAATGGAA+TGG | 0.521253 | 4_2:+46275762 | Msa0602570:CDS |
TGTGATGCTGCTATTGATAA+GGG | 0.521539 | 4_2:+46272669 | Msa0602570:CDS |
TGCTGAAGAGATGGATTTGA+CGG | 0.522080 | 4_2:+46268608 | Msa0602570:CDS |
TGCAGATCTGTGTATGGTGT+TGG | 0.522658 | 4_2:+46269092 | Msa0602570:intron |
TGTGATCCTTCTTGAACTTG+AGG | 0.522666 | 4_2:-46272168 | None:intergenic |
CACATACTCAATCAGAATCT+GGG | 0.523481 | 4_2:+46272948 | Msa0602570:CDS |
AAAATCTGTCCATTTCTGCC+AGG | 0.524175 | 4_2:-46275981 | None:intergenic |
AAAATACAACTAACCAGATA+GGG | 0.525817 | 4_2:-46275281 | None:intergenic |
GAAAGAAACAGGCAAAGCAT+TGG | 0.527347 | 4_2:+46272612 | Msa0602570:CDS |
TCACCTCAGACACTCTCAGC+TGG | 0.528005 | 4_2:+46275408 | Msa0602570:CDS |
TCGTCTAGCATGGTATGTAA+TGG | 0.528351 | 4_2:+46272540 | Msa0602570:CDS |
TCATGAGTGATGAAGGAGAA+AGG | 0.528395 | 4_2:+46268571 | Msa0602570:exon |
GCTAACATGATCAAATTAGC+AGG | 0.530607 | 4_2:+46276355 | Msa0602570:three_prime_UTR |
CTCTCAGCTGGAAATATTGG+TGG | 0.531090 | 4_2:+46275420 | Msa0602570:CDS |
GTAAGAAGTTCACCTCCAAA+TGG | 0.531797 | 4_2:+46271427 | Msa0602570:CDS |
TCTCAGCCATGTCCATTATG+TGG | 0.533611 | 4_2:-46269117 | None:intergenic |
TGCGAAGAAAATCCAGGAGG+TGG | 0.533776 | 4_2:-46275232 | None:intergenic |
TGTCAAATGGCCAATGGAAT+GGG | 0.533947 | 4_2:+46275763 | Msa0602570:CDS |
ATTCATATGGTATTTCCTCA+AGG | 0.535059 | 4_2:+46275667 | Msa0602570:CDS |
ACAGTATGCAACGGCGGTCA+GGG | 0.535587 | 4_2:+46271133 | Msa0602570:CDS |
TCCATCAGAAGATTTAGACT+TGG | 0.536050 | 4_2:-46269482 | None:intergenic |
ATATCTACAACAGAACATTT+GGG | 0.537644 | 4_2:+46275910 | Msa0602570:CDS |
TGCACAAAACAGTCAATCAC+TGG | 0.538022 | 4_2:+46275506 | Msa0602570:CDS |
TTATCGAAATAATTTAATTG+TGG | 0.538393 | 4_2:-46275549 | None:intergenic |
CTGCTTGGAATTGAAAATCC+TGG | 0.541862 | 4_2:-46275205 | None:intergenic |
TTTCTATGTTGTGTTAATGT+CGG | 0.542848 | 4_2:+46275947 | Msa0602570:three_prime_UTR |
GCTGGAAATATTGGTGGCAC+AGG | 0.544731 | 4_2:+46275426 | Msa0602570:CDS |
GAGTGGGAATGGTCTGGGTG+TGG | 0.545071 | 4_2:+46275800 | Msa0602570:CDS |
AAGCTTGTTGGAAGAAGCAA+TGG | 0.545728 | 4_2:-46273063 | None:intergenic |
AATGAGGCGCAGAGTGGGAA+TGG | 0.546688 | 4_2:+46275789 | Msa0602570:CDS |
ACAACTGAGGATAAGGGGCT+AGG | 0.546909 | 4_2:-46275713 | None:intergenic |
AAATAATCAAAGAGTGGAGG+AGG | 0.547380 | 4_2:-46269601 | None:intergenic |
TTGTCTTTCTTATTTGCCCA+AGG | 0.547862 | 4_2:+46272389 | Msa0602570:CDS |
TGACGTTAAGGAGTCATCCC+AGG | 0.548957 | 4_2:-46272736 | None:intergenic |
CTATGGATGGTACTCATGAC+TGG | 0.549894 | 4_2:+46276010 | Msa0602570:three_prime_UTR |
GTCCAATCATCTAGGGGAGG+AGG | 0.550314 | 4_2:-46271165 | None:intergenic |
ACAGTCAATCACTGGACGTA+CGG | 0.553072 | 4_2:+46275514 | Msa0602570:CDS |
AAATAATTTCCGCTTACACC+AGG | 0.553800 | 4_2:+46270747 | Msa0602570:CDS |
TGAGTATGTGACTCTTAGGC+TGG | 0.553889 | 4_2:-46272935 | None:intergenic |
CAATCTTGTCAAATGGCCAA+TGG | 0.556140 | 4_2:+46275757 | Msa0602570:CDS |
CGGTGTATTCAAAATGTACA+CGG | 0.559138 | 4_2:+46270400 | Msa0602570:CDS |
TCACAAGTTTCAGCTCCACC+AGG | 0.560660 | 4_2:+46275187 | Msa0602570:CDS |
TTACAGTAATAAATCAGAGA+TGG | 0.560906 | 4_2:-46276508 | None:intergenic |
ATGGTGTTGGCACCACATAA+TGG | 0.561273 | 4_2:+46269105 | Msa0602570:CDS |
TTTGGCTTGGACGGCACAGA+GGG | 0.562058 | 4_2:-46271625 | None:intergenic |
TGATACATACCAAGCAGCAC+TGG | 0.568396 | 4_2:-46271479 | None:intergenic |
CAATTTAACCAAGAAAACAT+TGG | 0.569537 | 4_2:-46276102 | None:intergenic |
GTCCAAAGGAACAGTGTGGA+GGG | 0.570249 | 4_2:+46272271 | Msa0602570:CDS |
CTGCTACCAATGAAGTGATA+CGG | 0.570295 | 4_2:+46272064 | Msa0602570:CDS |
GGCTATCCTGAGAAATTGAT+CGG | 0.570394 | 4_2:+46272561 | Msa0602570:CDS |
CCACAAAATATTGTCATGCA+TGG | 0.573891 | 4_2:+46270556 | Msa0602570:CDS |
AGACACTGCTTCCTCTGGAC+CGG | 0.575412 | 4_2:-46272043 | None:intergenic |
TTTGGCTTGGACAGGACAGA+GGG | 0.575802 | 4_2:-46271673 | None:intergenic |
AGTCTAAATCTTCTGATGGA+AGG | 0.576123 | 4_2:+46269485 | Msa0602570:CDS |
GCTTCCTCAAAGTTACTGGT+AGG | 0.576306 | 4_2:-46273017 | None:intergenic |
GGTGGAATGAGGCGCAGAGT+GGG | 0.580142 | 4_2:+46275784 | Msa0602570:CDS |
TTAGTCAAGACATATTCAGT+AGG | 0.584549 | 4_2:-46272141 | None:intergenic |
AAATCTCCTCAAGTTCAAGA+AGG | 0.584893 | 4_2:+46272162 | Msa0602570:CDS |
GCTGAGAAGGATGATACGGA+TGG | 0.584953 | 4_2:+46269133 | Msa0602570:CDS |
CCAATGGAATGGGTGGAATG+AGG | 0.589384 | 4_2:+46275773 | Msa0602570:CDS |
GTGTAATTTATGGCTGCAGT+TGG | 0.589802 | 4_2:+46276065 | Msa0602570:three_prime_UTR |
AGTCGAGTTCAACAGATCAC+TGG | 0.589840 | 4_2:+46271102 | Msa0602570:CDS |
GTTAATTGAGGAGAACTCAC+TGG | 0.596913 | 4_2:-46272094 | None:intergenic |
CCTTGTGGTATGAAGTATGG+GGG | 0.597183 | 4_2:+46276550 | Msa0602570:three_prime_UTR |
CATAGACAACTGAGGATAAG+GGG | 0.597857 | 4_2:-46275718 | None:intergenic |
AGTCCAAAGGAACAGTGTGG+AGG | 0.599437 | 4_2:+46272270 | Msa0602570:CDS |
TGTTAAACAATATATTAGCA+TGG | 0.601825 | 4_2:+46271849 | Msa0602570:CDS |
CATGGCTGAGAAGGATGATA+CGG | 0.602355 | 4_2:+46269129 | Msa0602570:CDS |
ATGTCGGAAATGGTAAAACC+TGG | 0.605222 | 4_2:+46275963 | Msa0602570:three_prime_UTR |
TTCAAAGTAACAATCAGTCA+AGG | 0.605457 | 4_2:+46272838 | Msa0602570:CDS |
TACATACCAAGCAGCACTGG+TGG | 0.605474 | 4_2:-46271476 | None:intergenic |
CTGTCACTATCTCGTGACAA+TGG | 0.606131 | 4_2:-46271958 | None:intergenic |
AGACAATCAGGGTTGATGCA+AGG | 0.607350 | 4_2:-46270677 | None:intergenic |
CCGATAACAACCAATACAGC+CGG | 0.610345 | 4_2:+46272216 | Msa0602570:CDS |
CTGAAATAATCAAAGAGTGG+AGG | 0.610416 | 4_2:-46269604 | None:intergenic |
ATCCCAGGGATCAAAATCGA+GGG | 0.615475 | 4_2:-46272721 | None:intergenic |
TATTACTTATTCAAACGAAG+AGG | 0.619236 | 4_2:+46270369 | Msa0602570:CDS |
TCCTTGTGGTATGAAGTATG+GGG | 0.619656 | 4_2:+46276549 | Msa0602570:three_prime_UTR |
GGAAAAGATTGTTGGGACAG+CGG | 0.620399 | 4_2:+46269189 | Msa0602570:CDS |
TCTTCATCTGCCAGATCCAG+AGG | 0.620516 | 4_2:-46269565 | None:intergenic |
CTGAGAAGGATGATACGGAT+GGG | 0.623043 | 4_2:+46269134 | Msa0602570:CDS |
TAAAAGTGTCTTAAACTACC+TGG | 0.624341 | 4_2:+46276158 | Msa0602570:three_prime_UTR |
TATGTGTGTTAGGGGCACAC+AGG | 0.625185 | 4_2:+46271564 | Msa0602570:intron |
AAACTGAAATAATCAAAGAG+TGG | 0.625407 | 4_2:-46269607 | None:intergenic |
GGACAGCGGCAAAATGTGAA+AGG | 0.625499 | 4_2:+46269203 | Msa0602570:CDS |
GCTTCTGCAGCACAATGTGA+TGG | 0.625739 | 4_2:+46271754 | Msa0602570:CDS |
GACGTTAAGGAGTCATCCCA+GGG | 0.627813 | 4_2:-46272735 | None:intergenic |
GAAACAGGCAAAGCATTGGA+AGG | 0.627985 | 4_2:+46272616 | Msa0602570:CDS |
ACCTCATAACCACATCTGCA+AGG | 0.628226 | 4_2:-46268645 | None:intergenic |
ATGTGATAAACCTCCAACAG+GGG | 0.629673 | 4_2:-46271602 | None:intergenic |
TTTCCAGCTGAGAGTGTCTG+AGG | 0.629927 | 4_2:-46275411 | None:intergenic |
AGAACATTACCTGGTGTAAG+CGG | 0.633037 | 4_2:-46270756 | None:intergenic |
TCATGCATGGCTCCGAAATG+CGG | 0.633847 | 4_2:+46270569 | Msa0602570:CDS |
TCTTAAAAGTGTCAATGTCA+CGG | 0.635277 | 4_2:+46269743 | Msa0602570:CDS |
TCACCATACTGCATTAGACA+AGG | 0.635869 | 4_2:-46272447 | None:intergenic |
AATAACTTCACTATATTATG+CGG | 0.636773 | 4_2:-46272759 | None:intergenic |
GAGAGAGAAAGCGCACCACA+GGG | 0.638965 | 4_2:-46267920 | None:intergenic |
CATCCCAGGGATCAAAATCG+AGG | 0.639851 | 4_2:-46272722 | None:intergenic |
CGTGCAAATATAGACAATCA+GGG | 0.641408 | 4_2:-46270688 | None:intergenic |
CAAATGGCCAATGGAATGGG+TGG | 0.641492 | 4_2:+46275766 | Msa0602570:CDS |
TCATAAGGAGAACGACACGC+AGG | 0.644622 | 4_2:-46269163 | None:intergenic |
GCAATCCAACTATGTAAACA+AGG | 0.648676 | 4_2:-46269543 | None:intergenic |
AAAAGTGTCAATGTCACGGA+CGG | 0.649581 | 4_2:+46269747 | Msa0602570:CDS |
AAGAAGATGAAACTGTGAGG+AGG | 0.651594 | 4_2:-46268012 | None:intergenic |
GTGTCACAAACAGTATGCAA+CGG | 0.652666 | 4_2:+46271124 | Msa0602570:CDS |
CATAAGGAGAACGACACGCA+GGG | 0.654435 | 4_2:-46269162 | None:intergenic |
GTGTCGTTCTCCTTATGACA+AGG | 0.656317 | 4_2:+46269168 | Msa0602570:CDS |
GATGTGATAAACCTCCAACA+GGG | 0.658255 | 4_2:-46271603 | None:intergenic |
CTTGGAATTGAAAATCCTGG+TGG | 0.661159 | 4_2:-46275202 | None:intergenic |
ACATACCAAGCAGCACTGGT+GGG | 0.662474 | 4_2:-46271475 | None:intergenic |
GAGTCGTAATACAATACCAA+GGG | 0.664587 | 4_2:+46271804 | Msa0602570:CDS |
AGAGTCGTAATACAATACCA+AGG | 0.667565 | 4_2:+46271803 | Msa0602570:CDS |
TGTGATAAACCTCCAACAGG+GGG | 0.672431 | 4_2:-46271601 | None:intergenic |
TTGGTCCAATCATCTAGGGG+AGG | 0.674713 | 4_2:-46271168 | None:intergenic |
TTGAGACTGATCCAACCTTG+AGG | 0.676768 | 4_2:-46275682 | None:intergenic |
TTTAGTCCAAAGGAACAGTG+TGG | 0.681841 | 4_2:+46272267 | Msa0602570:CDS |
TGATTGTCTATATTTGCACG+AGG | 0.691640 | 4_2:+46270691 | Msa0602570:CDS |
GGGTGGAATGAGGCGCAGAG+TGG | 0.692146 | 4_2:+46275783 | Msa0602570:CDS |
CACCATACTGCATTAGACAA+GGG | 0.693804 | 4_2:-46272446 | None:intergenic |
TGCTGGCTGACAGTATAAGA+CGG | 0.698728 | 4_2:-46272912 | None:intergenic |
TCCATCTCTTCAGCACAGAG+AGG | 0.701846 | 4_2:-46268600 | None:intergenic |
TTGGCACCACATAATGGACA+TGG | 0.703228 | 4_2:+46269111 | Msa0602570:CDS |
TTGTCACGAGATAGTGACAG+AGG | 0.704816 | 4_2:+46271961 | Msa0602570:CDS |
TTATTGGTCCAATCATCTAG+GGG | 0.707559 | 4_2:-46271171 | None:intergenic |
CACAATGTGATGGTTCAAGG+AGG | 0.714959 | 4_2:+46271764 | Msa0602570:CDS |
TATCCTGAGAAATTGATCGG+TGG | 0.715354 | 4_2:+46272564 | Msa0602570:CDS |
GACTGCTGCATAGACAACTG+AGG | 0.729537 | 4_2:-46275726 | None:intergenic |
GAGAAGAAGATGAAACTGTG+AGG | 0.734883 | 4_2:-46268015 | None:intergenic |
TCACAAACAGTATGCAACGG+CGG | 0.734915 | 4_2:+46271127 | Msa0602570:CDS |
AAAACTCCGAATAGAAAACG+AGG | 0.739520 | 4_2:-46269632 | None:intergenic |
TCATGCGAAGAAAATCCAGG+AGG | 0.788800 | 4_2:-46275235 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTAATATTTTTAATTTTTTT+TGG | + | chr4_2:46268215-46268234 | Msa0602570:intron | 0.0% |
!!! | TTTTGAATTTTTTGTTAAAT+CGG | + | chr4_2:46268297-46268316 | Msa0602570:intron | 10.0% |
!! | ATTACTTATTAATCTAATAT+TGG | + | chr4_2:46268344-46268363 | Msa0602570:intron | 10.0% |
!!! | ATTTTTAAGTTATTTATACA+AGG | + | chr4_2:46269348-46269367 | Msa0602570:intron | 10.0% |
!!! | TTTTTAAGTTATTTATACAA+GGG | + | chr4_2:46269349-46269368 | Msa0602570:intron | 10.0% |
!! | AAAATTAGTGTATATTTATT+TGG | - | chr4_2:46271066-46271085 | None:intergenic | 10.0% |
!! | TAGAAATTAAACATAATATT+TGG | + | chr4_2:46274052-46274071 | Msa0602570:intron | 10.0% |
!! | ATATATTCTGAATCAAATTA+GGG | - | chr4_2:46268097-46268116 | None:intergenic | 15.0% |
!!! | CAATTTTCTCAAATTATTAT+TGG | + | chr4_2:46268842-46268861 | Msa0602570:intron | 15.0% |
!! | AAGAGAAATACAATATAAAT+AGG | - | chr4_2:46269385-46269404 | None:intergenic | 15.0% |
!! | ATATTAAATGTATTACACAA+TGG | - | chr4_2:46270305-46270324 | None:intergenic | 15.0% |
!!! | TAATTTTTTTTGCTTGTTTT+TGG | + | chr4_2:46270505-46270524 | Msa0602570:intron | 15.0% |
!! | TAGATATATTCAACATTAAA+GGG | - | chr4_2:46271522-46271541 | None:intergenic | 15.0% |
!! | TTAGATATATTCAACATTAA+AGG | - | chr4_2:46271523-46271542 | None:intergenic | 15.0% |
!! | ATATATTGTTTAACAGATTT+CGG | - | chr4_2:46271844-46271863 | None:intergenic | 15.0% |
!!! | CATAATTTTTATCCATATTT+TGG | + | chr4_2:46273262-46273281 | Msa0602570:intron | 15.0% |
!! | AAACAAAAAAAAAATGTACA+TGG | - | chr4_2:46273501-46273520 | None:intergenic | 15.0% |
!! | AAATACAAAAAAAATGTGAA+AGG | - | chr4_2:46275315-46275334 | None:intergenic | 15.0% |
!!! | CATTTTTTTTGTATTTATGT+TGG | + | chr4_2:46275319-46275338 | Msa0602570:intron | 15.0% |
!! | TTATCGAAATAATTTAATTG+TGG | - | chr4_2:46275552-46275571 | None:intergenic | 15.0% |
!!! | TTTAAAATTGTTTTCATACT+AGG | + | chr4_2:46276213-46276232 | Msa0602570:three_prime_UTR | 15.0% |
!!! | ATATTTCCTTTTAACTATTT+GGG | - | chr4_2:46276581-46276600 | None:intergenic | 15.0% |
!!! | AATATTTCCTTTTAACTATT+TGG | - | chr4_2:46276582-46276601 | None:intergenic | 15.0% |
!! | CATATATTCTGAATCAAATT+AGG | - | chr4_2:46268098-46268117 | None:intergenic | 20.0% |
!! | GTAATGCATTATAGAAAAAT+AGG | - | chr4_2:46268329-46268348 | None:intergenic | 20.0% |
!!! | TTATTATGAACTTGTGATTT+TGG | + | chr4_2:46268425-46268444 | Msa0602570:intron | 20.0% |
!!! | TATTATGAACTTGTGATTTT+GGG | + | chr4_2:46268426-46268445 | Msa0602570:intron | 20.0% |
!! | ATTCTATCAATGCAATTATT+TGG | + | chr4_2:46268671-46268690 | Msa0602570:intron | 20.0% |
!! | ACAATTTACATGGTTAATTT+AGG | + | chr4_2:46268976-46268995 | Msa0602570:intron | 20.0% |
!!! | GTTAAAAGTGTAATCAATTA+AGG | - | chr4_2:46270634-46270653 | None:intergenic | 20.0% |
!! | AAATAAATAAGAACATTACC+TGG | - | chr4_2:46270768-46270787 | None:intergenic | 20.0% |
!! | TATACAAAATTCTTGCAAAT+AGG | + | chr4_2:46270845-46270864 | Msa0602570:intron | 20.0% |
!! | TGTTAAACAATATATTAGCA+TGG | + | chr4_2:46271849-46271868 | Msa0602570:CDS | 20.0% |
!!! | TTTTCTATCAATGTTAATTG+AGG | - | chr4_2:46272109-46272128 | None:intergenic | 20.0% |
!!! | TAGAGAGTTTTGAATTATTA+AGG | - | chr4_2:46272425-46272444 | None:intergenic | 20.0% |
!! | AATAACTTCACTATATTATG+CGG | - | chr4_2:46272762-46272781 | None:intergenic | 20.0% |
!! | CATAATATAGTGAAGTTATT+GGG | + | chr4_2:46272762-46272781 | Msa0602570:CDS | 20.0% |
!!! | CTAGAATTAGATGTTTTTAA+AGG | - | chr4_2:46272813-46272832 | None:intergenic | 20.0% |
!!! | CTTTAAAAACATCTAATTCT+AGG | + | chr4_2:46272811-46272830 | Msa0602570:CDS | 20.0% |
!! | ACATAAAAAATGTAGAAAGT+TGG | - | chr4_2:46273905-46273924 | None:intergenic | 20.0% |
!!! | ACTTTCTACATTTTTTATGT+TGG | + | chr4_2:46273905-46273924 | Msa0602570:intron | 20.0% |
!!! | ATTATGTTTAATTTCTACCT+GGG | - | chr4_2:46274049-46274068 | None:intergenic | 20.0% |
!!! | TATTATGTTTAATTTCTACC+TGG | - | chr4_2:46274050-46274069 | None:intergenic | 20.0% |
!! | AAAAAAAATACCTCTACTTA+TGG | + | chr4_2:46274266-46274285 | Msa0602570:intron | 20.0% |
!! | AAATATGAAAATTTGATTCC+TGG | + | chr4_2:46274433-46274452 | Msa0602570:intron | 20.0% |
!! | AATATGAAAATTTGATTCCT+GGG | + | chr4_2:46274434-46274453 | Msa0602570:intron | 20.0% |
!!! | TATTTTTCAAAGAAAGTGTT+TGG | + | chr4_2:46274457-46274476 | Msa0602570:intron | 20.0% |
!! | ATTATTAAACTGCTTTCTTT+CGG | + | chr4_2:46275052-46275071 | Msa0602570:intron | 20.0% |
!! | GATATGATGATTCAAAATAT+CGG | + | chr4_2:46275871-46275890 | Msa0602570:CDS | 20.0% |
!! | TTGGTTAAATTGGATTAATA+TGG | + | chr4_2:46276113-46276132 | Msa0602570:three_prime_UTR | 20.0% |
!! | ATTATGAACTTGTGATTTTG+GGG | + | chr4_2:46268427-46268446 | Msa0602570:intron | 25.0% |
!! | GAGTCTTTTTACAATTTACA+TGG | + | chr4_2:46268966-46268985 | Msa0602570:intron | 25.0% |
! | CTGTTAAATTTCACATAATC+AGG | - | chr4_2:46269024-46269043 | None:intergenic | 25.0% |
! | GATTATGTGAAATTTAACAG+AGG | + | chr4_2:46269024-46269043 | Msa0602570:intron | 25.0% |
!!! | TGGCAATTTTAAAAATTTCC+AGG | - | chr4_2:46269258-46269277 | None:intergenic | 25.0% |
! | TGAAATGAATTTGGAGAAAA+AGG | + | chr4_2:46269444-46269463 | Msa0602570:CDS | 25.0% |
! | AAACTGAAATAATCAAAGAG+TGG | - | chr4_2:46269610-46269629 | None:intergenic | 25.0% |
! | ATATGATTAAAGACTCTCTA+AGG | - | chr4_2:46269669-46269688 | None:intergenic | 25.0% |
! | TTGTGGTAAATTAGATAGTT+AGG | + | chr4_2:46269918-46269937 | Msa0602570:intron | 25.0% |
!! | TCAAACACATTTTTGTAACT+TGG | + | chr4_2:46269996-46270015 | Msa0602570:intron | 25.0% |
!! | TCAAAGACATTTTTGTAACT+TGG | + | chr4_2:46270153-46270172 | Msa0602570:intron | 25.0% |
! | TATTACTTATTCAAACGAAG+AGG | + | chr4_2:46270369-46270388 | Msa0602570:CDS | 25.0% |
! | AAAATTAATAAGCAAGACCA+GGG | - | chr4_2:46270492-46270511 | None:intergenic | 25.0% |
! | AAAAATTAATAAGCAAGACC+AGG | - | chr4_2:46270493-46270512 | None:intergenic | 25.0% |
!! | TTTTTGGATTGTATGTTTCA+GGG | + | chr4_2:46270521-46270540 | Msa0602570:intron | 25.0% |
!! | AGGCAATGTTCTTATAATTT+TGG | + | chr4_2:46270799-46270818 | Msa0602570:intron | 25.0% |
! | TTAAAACCATGTTCTGATTT+AGG | + | chr4_2:46270984-46271003 | Msa0602570:intron | 25.0% |
! | AGCAATTAAAATGTGCAAAA+GGG | - | chr4_2:46271027-46271046 | None:intergenic | 25.0% |
! | AAGCAATTAAAATGTGCAAA+AGG | - | chr4_2:46271028-46271047 | None:intergenic | 25.0% |
!!! | GATGTGTTTCATTTTAATGA+TGG | + | chr4_2:46271384-46271403 | Msa0602570:intron | 25.0% |
! | GAATATATCTAACGAAGTTA+TGG | + | chr4_2:46271531-46271550 | Msa0602570:intron | 25.0% |
! | TTAAATGCTACTAACATTAC+TGG | + | chr4_2:46272006-46272025 | Msa0602570:CDS | 25.0% |
! | AAATAAGAAAGACAAACTTC+TGG | - | chr4_2:46272384-46272403 | None:intergenic | 25.0% |
! | GCATAATATAGTGAAGTTAT+TGG | + | chr4_2:46272761-46272780 | Msa0602570:CDS | 25.0% |
!!! | TTAGATGTTTTTAAAGGACA+AGG | - | chr4_2:46272807-46272826 | None:intergenic | 25.0% |
!! | GAATCTCAAATTCAATCTTT+TGG | + | chr4_2:46272882-46272901 | Msa0602570:CDS | 25.0% |
!! | AGATTTTTATATGGAGAAGT+TGG | + | chr4_2:46272977-46272996 | Msa0602570:CDS | 25.0% |
!! | GATTTTTATATGGAGAAGTT+GGG | + | chr4_2:46272978-46272997 | Msa0602570:CDS | 25.0% |
! | AAATGTCAAAATTTCAGCAT+AGG | - | chr4_2:46273176-46273195 | None:intergenic | 25.0% |
!!! | TTTCAGTAATTGATTTTGTG+TGG | + | chr4_2:46273193-46273212 | Msa0602570:intron | 25.0% |
! | GAAAAAGCAAAACCAAAATA+TGG | - | chr4_2:46273277-46273296 | None:intergenic | 25.0% |
! | TGTATTGGAATTGTTTATAG+AGG | + | chr4_2:46273366-46273385 | Msa0602570:intron | 25.0% |
! | TGTAGCATCTATTATGTATA+TGG | - | chr4_2:46273532-46273551 | None:intergenic | 25.0% |
! | ATAGATGCTACAAAGATTAA+TGG | + | chr4_2:46273540-46273559 | Msa0602570:intron | 25.0% |
!!! | TAGTTTTAGTAGAACTAAGT+CGG | + | chr4_2:46273961-46273980 | Msa0602570:intron | 25.0% |
! | TAAATGAAAAGCTAGAACAA+AGG | + | chr4_2:46273986-46274005 | Msa0602570:intron | 25.0% |
! | GTACATAATTTGACATTTCT+AGG | + | chr4_2:46274479-46274498 | Msa0602570:intron | 25.0% |
!! | TTTGACATTTCTAGGAAAAT+TGG | + | chr4_2:46274487-46274506 | Msa0602570:intron | 25.0% |
! | ATAATTAAAACGCCATCATA+GGG | + | chr4_2:46274778-46274797 | Msa0602570:intron | 25.0% |
! | TTATTAAACTGCTTTCTTTC+GGG | + | chr4_2:46275053-46275072 | Msa0602570:intron | 25.0% |
! | AGTGCAACTCATAAATTATA+GGG | - | chr4_2:46275091-46275110 | None:intergenic | 25.0% |
! | TGTCAAACATAGCAAAATAA+AGG | - | chr4_2:46275155-46275174 | None:intergenic | 25.0% |
! | AAAATACAACTAACCAGATA+GGG | - | chr4_2:46275284-46275303 | None:intergenic | 25.0% |
!! | ATTTTGAATCATCATATCCT+GGG | - | chr4_2:46275869-46275888 | None:intergenic | 25.0% |
!!! | TATTTTGAATCATCATATCC+TGG | - | chr4_2:46275870-46275889 | None:intergenic | 25.0% |
! | ATATCTACAACAGAACATTT+GGG | + | chr4_2:46275910-46275929 | Msa0602570:CDS | 25.0% |
! | TTTCTATGTTGTGTTAATGT+CGG | + | chr4_2:46275947-46275966 | Msa0602570:three_prime_UTR | 25.0% |
! | CAATTTAACCAAGAAAACAT+TGG | - | chr4_2:46276105-46276124 | None:intergenic | 25.0% |
!! | CAATGTTTTCTTGGTTAAAT+TGG | + | chr4_2:46276103-46276122 | Msa0602570:three_prime_UTR | 25.0% |
!! | ATTGTTTTCATACTAGGTTT+TGG | + | chr4_2:46276219-46276238 | Msa0602570:three_prime_UTR | 25.0% |
! | TTACAGTAATAAATCAGAGA+TGG | - | chr4_2:46276511-46276530 | None:intergenic | 25.0% |
!!! | TTTTTGTTTTACTATCCTTG+TGG | + | chr4_2:46276535-46276554 | Msa0602570:three_prime_UTR | 25.0% |
!!! | AAAAGGAAATATTTTAGCAG+TGG | + | chr4_2:46276589-46276608 | Msa0602570:three_prime_UTR | 25.0% |
TTTAAAAGAGAGAGAGAAGA+AGG | - | chr4_2:46267894-46267913 | None:intergenic | 30.0% | |
AGAAATTAGGGTTAGAGATT+AGG | - | chr4_2:46268067-46268086 | None:intergenic | 30.0% | |
ATTAAAATACGACGAACCTA+AGG | - | chr4_2:46268273-46268292 | None:intergenic | 30.0% | |
! | AGTAGTTTAGAGTTAGTAAC+TGG | + | chr4_2:46268453-46268472 | Msa0602570:intron | 30.0% |
! | TTGTGTTCAGTTTTTGTTGA+GGG | + | chr4_2:46268545-46268564 | Msa0602570:intron | 30.0% |
!! | GAAAACTGTGTTTTTGCATA+TGG | + | chr4_2:46268720-46268739 | Msa0602570:intron | 30.0% |
!! | TGGAGTAGCTAATTATTTTG+TGG | + | chr4_2:46268914-46268933 | Msa0602570:intron | 30.0% |
! | ACAATCTTTTCCTTGTCATA+AGG | - | chr4_2:46269181-46269200 | None:intergenic | 30.0% |
TATGACAAGGAAAAGATTGT+TGG | + | chr4_2:46269181-46269200 | Msa0602570:CDS | 30.0% | |
ATGACAAGGAAAAGATTGTT+GGG | + | chr4_2:46269182-46269201 | Msa0602570:CDS | 30.0% | |
ACAGTATATTTATGTAGTCC+TGG | + | chr4_2:46269237-46269256 | Msa0602570:intron | 30.0% | |
ACCTTCAAACATAAAAGCTT+TGG | - | chr4_2:46269278-46269297 | None:intergenic | 30.0% | |
ACTGCTGAATGAAATGAATT+TGG | + | chr4_2:46269435-46269454 | Msa0602570:CDS | 30.0% | |
! | GTTTTACCTCGTTTTCTATT+CGG | + | chr4_2:46269626-46269645 | Msa0602570:CDS | 30.0% |
!! | TCTTAAAAGTGTCAATGTCA+CGG | + | chr4_2:46269743-46269762 | Msa0602570:CDS | 30.0% |
! | CATTATCGTTTTCTGTTTGT+TGG | + | chr4_2:46269839-46269858 | Msa0602570:intron | 30.0% |
! | TTTCTGTTTGTTGGCTATAT+AGG | + | chr4_2:46269848-46269867 | Msa0602570:intron | 30.0% |
!! | TTTTCCTTTTGTTGTCATTG+TGG | + | chr4_2:46269901-46269920 | Msa0602570:intron | 30.0% |
TTTACCACAATGACAACAAA+AGG | - | chr4_2:46269908-46269927 | None:intergenic | 30.0% | |
GGAGTCTGTATATATAGTTT+CGG | + | chr4_2:46269939-46269958 | Msa0602570:intron | 30.0% | |
GAGTCTGTATATATAGTTTC+GGG | + | chr4_2:46269940-46269959 | Msa0602570:intron | 30.0% | |
AGTCTGTATATATAGTTTCG+GGG | + | chr4_2:46269941-46269960 | Msa0602570:intron | 30.0% | |
! | TGTGTTTGAAGTATATTTGC+TGG | - | chr4_2:46269985-46270004 | None:intergenic | 30.0% |
TGTAACTTGGTTAAAAGAGA+AGG | + | chr4_2:46270009-46270028 | Msa0602570:intron | 30.0% | |
TCTCATGCTATGTAAAGAAA+TGG | - | chr4_2:46270042-46270061 | None:intergenic | 30.0% | |
TGAGATTAAAGAAACTGCTA+AGG | + | chr4_2:46270057-46270076 | Msa0602570:intron | 30.0% | |
!! | TGTCTTTGAAGTATATTTGC+TGG | - | chr4_2:46270142-46270161 | None:intergenic | 30.0% |
TGTAACTTGGTTAAAAGAGA+AGG | + | chr4_2:46270009-46270028 | Msa0602570:intron | 30.0% | |
! | TGTCATTTCTTTACATAGCA+CGG | + | chr4_2:46270194-46270213 | Msa0602570:intron | 30.0% |
AATGCTACAGTTTCTAATCA+AGG | + | chr4_2:46270332-46270351 | Msa0602570:intron | 30.0% | |
!! | AAATGTACACGGATTTGTTT+TGG | + | chr4_2:46270411-46270430 | Msa0602570:CDS | 30.0% |
!! | GTTTTTGGATTGTATGTTTC+AGG | + | chr4_2:46270520-46270539 | Msa0602570:intron | 30.0% |
! | CTAATTTTCATACCGCATTT+CGG | - | chr4_2:46270584-46270603 | None:intergenic | 30.0% |
AATGCGGTATGAAAATTAGT+AGG | + | chr4_2:46270585-46270604 | Msa0602570:intron | 30.0% | |
TATTTATTTCCGCTTACACT+AGG | + | chr4_2:46270779-46270798 | Msa0602570:intron | 30.0% | |
GCAATTAAAATGTGCAAAAG+GGG | - | chr4_2:46271026-46271045 | None:intergenic | 30.0% | |
ATTATTGGTCCAATCATCTA+GGG | - | chr4_2:46271175-46271194 | None:intergenic | 30.0% | |
AATTATTGGTCCAATCATCT+AGG | - | chr4_2:46271176-46271195 | None:intergenic | 30.0% | |
GAAAATAGAGGGACTATATA+GGG | - | chr4_2:46271253-46271272 | None:intergenic | 30.0% | |
! | CTATATAGTCCCTCTATTTT+CGG | + | chr4_2:46271252-46271271 | Msa0602570:intron | 30.0% |
TTCCAATGTTTATGTGTGTT+AGG | + | chr4_2:46271554-46271573 | Msa0602570:intron | 30.0% | |
TCCAATGTTTATGTGTGTTA+GGG | + | chr4_2:46271555-46271574 | Msa0602570:intron | 30.0% | |
AACTCGTTCTTTAAATTGAC+AGG | - | chr4_2:46271928-46271947 | None:intergenic | 30.0% | |
TTAGTCAAGACATATTCAGT+AGG | - | chr4_2:46272144-46272163 | None:intergenic | 30.0% | |
!! | TTTTGAGAATCAAAGACTCA+AGG | + | chr4_2:46272356-46272375 | Msa0602570:CDS | 30.0% |
!! | TTAAGGAAATTTGTTGCCTT+GGG | - | chr4_2:46272408-46272427 | None:intergenic | 30.0% |
!! | ATTAAGGAAATTTGTTGCCT+TGG | - | chr4_2:46272409-46272428 | None:intergenic | 30.0% |
TATCTTCCAATGATAGAGTT+CGG | + | chr4_2:46272499-46272518 | Msa0602570:CDS | 30.0% | |
! | TATTTTACATTCGTCTAGCA+TGG | + | chr4_2:46272530-46272549 | Msa0602570:CDS | 30.0% |
TTCAAAGTAACAATCAGTCA+AGG | + | chr4_2:46272838-46272857 | Msa0602570:CDS | 30.0% | |
! | GGGAGAAAGAGATTTTTATA+TGG | + | chr4_2:46272968-46272987 | Msa0602570:CDS | 30.0% |
! | ATAGATTTTACTCAACCCTA+TGG | - | chr4_2:46273225-46273244 | None:intergenic | 30.0% |
CAAACCTATAACAGAAAATC+TGG | + | chr4_2:46273442-46273461 | Msa0602570:intron | 30.0% | |
! | TCAACCAGATTTTCTGTTAT+AGG | - | chr4_2:46273449-46273468 | None:intergenic | 30.0% |
TGATTTAATACCAGAGAGAT+CGG | + | chr4_2:46273466-46273485 | Msa0602570:intron | 30.0% | |
ATTCAATGATGATTGCTCTA+CGG | + | chr4_2:46273697-46273716 | Msa0602570:intron | 30.0% | |
! | TTTTTACTCACAAAACCTAC+TGG | - | chr4_2:46273773-46273792 | None:intergenic | 30.0% |
!!! | ACGAAGGATTTTTGTTTTTG+CGG | + | chr4_2:46273934-46273953 | Msa0602570:intron | 30.0% |
!! | AGTTTTAGTAGAACTAAGTC+GGG | + | chr4_2:46273962-46273981 | Msa0602570:intron | 30.0% |
TTGGAATGTAAGTTTAGCAA+AGG | + | chr4_2:46274071-46274090 | Msa0602570:intron | 30.0% | |
! | TACTTGAAATGAGACACTTT+TGG | - | chr4_2:46274142-46274161 | None:intergenic | 30.0% |
ACAAAGCAATGGAGAAATAA+AGG | + | chr4_2:46274177-46274196 | Msa0602570:intron | 30.0% | |
CAAAGCAATGGAGAAATAAA+GGG | + | chr4_2:46274178-46274197 | Msa0602570:intron | 30.0% | |
ATAAAGCCTATAATGTTGCA+TGG | + | chr4_2:46274308-46274327 | Msa0602570:intron | 30.0% | |
TCAGGCAGTAAAATAAACTA+AGG | + | chr4_2:46274355-46274374 | Msa0602570:intron | 30.0% | |
CAGGCAGTAAAATAAACTAA+GGG | + | chr4_2:46274356-46274375 | Msa0602570:intron | 30.0% | |
AGGCAGTAAAATAAACTAAG+GGG | + | chr4_2:46274357-46274376 | Msa0602570:intron | 30.0% | |
! | CTCTGTTACAAATTTTTACC+AGG | + | chr4_2:46274390-46274409 | Msa0602570:intron | 30.0% |
TCATATTTACATTCCTGAGT+AGG | - | chr4_2:46274421-46274440 | None:intergenic | 30.0% | |
! | ACTTTCTTTGAAAAATACCC+AGG | - | chr4_2:46274454-46274473 | None:intergenic | 30.0% |
TCTCAACCTTATAACAAACA+TGG | + | chr4_2:46274641-46274660 | Msa0602570:intron | 30.0% | |
CTCAACCTTATAACAAACAT+GGG | + | chr4_2:46274642-46274661 | Msa0602570:intron | 30.0% | |
!! | CTATACCCATGTTTGTTATA+AGG | - | chr4_2:46274650-46274669 | None:intergenic | 30.0% |
ATGAGAATGTTAACAAACTG+TGG | + | chr4_2:46274731-46274750 | Msa0602570:intron | 30.0% | |
!!! | TGGCGTTTTAATTATGGAAA+AGG | - | chr4_2:46274773-46274792 | None:intergenic | 30.0% |
!!! | CTATGATGGCGTTTTAATTA+TGG | - | chr4_2:46274779-46274798 | None:intergenic | 30.0% |
CATAATTAAAACGCCATCAT+AGG | + | chr4_2:46274777-46274796 | Msa0602570:intron | 30.0% | |
!!! | GTTGAAGAGCTTTTAAGTTA+TGG | + | chr4_2:46274879-46274898 | Msa0602570:intron | 30.0% |
TCAGATATGTAGTGTGTTAT+TGG | + | chr4_2:46274921-46274940 | Msa0602570:intron | 30.0% | |
CAACTCATAAATTATAGGGA+AGG | - | chr4_2:46275087-46275106 | None:intergenic | 30.0% | |
CAGTGCAACTCATAAATTAT+AGG | - | chr4_2:46275092-46275111 | None:intergenic | 30.0% | |
GAAAATACAACTAACCAGAT+AGG | - | chr4_2:46275285-46275304 | None:intergenic | 30.0% | |
! | ATAGTTGTTATCCTTTTGAC+AGG | + | chr4_2:46275348-46275367 | Msa0602570:intron | 30.0% |
GTAATGAATTACCTGTCAAA+AGG | - | chr4_2:46275362-46275381 | None:intergenic | 30.0% | |
!! | ATTTATGGATCCTGCTATTT+TGG | + | chr4_2:46275458-46275477 | Msa0602570:CDS | 30.0% |
AACCTTAGATTTCCTGAAAT+TGG | + | chr4_2:46275621-46275640 | Msa0602570:CDS | 30.0% | |
ACCTTAGATTTCCTGAAATT+GGG | + | chr4_2:46275622-46275641 | Msa0602570:CDS | 30.0% | |
!! | GAAAAAGTATTCCCAATTTC+AGG | - | chr4_2:46275636-46275655 | None:intergenic | 30.0% |
ATTCATATGGTATTTCCTCA+AGG | + | chr4_2:46275667-46275686 | Msa0602570:CDS | 30.0% | |
ACAAATCCAATCTTGTCAAA+TGG | + | chr4_2:46275750-46275769 | Msa0602570:CDS | 30.0% | |
TCTTTCATTCCTCAAAAGTT+CGG | - | chr4_2:46275826-46275845 | None:intergenic | 30.0% | |
GATATCTACAACAGAACATT+TGG | + | chr4_2:46275909-46275928 | Msa0602570:CDS | 30.0% | |
! | ATCCCAAGAAGTGTAATTTA+TGG | + | chr4_2:46276055-46276074 | Msa0602570:three_prime_UTR | 30.0% |
AGCCATAAATTACACTTCTT+GGG | - | chr4_2:46276060-46276079 | None:intergenic | 30.0% | |
! | GTTAACTTCCAATGTTTTCT+TGG | + | chr4_2:46276094-46276113 | Msa0602570:three_prime_UTR | 30.0% |
!! | TAAAAGTGTCTTAAACTACC+TGG | + | chr4_2:46276158-46276177 | Msa0602570:three_prime_UTR | 30.0% |
! | TTTGATCATGTTAGCATTGA+CGG | - | chr4_2:46276350-46276369 | None:intergenic | 30.0% |
TACAGAGAATGAAAACTTGT+TGG | + | chr4_2:46276408-46276427 | Msa0602570:intron | 30.0% | |
TACAGAGAATGAAAACTTGT+TGG | + | chr4_2:46276408-46276427 | Msa0602570:intron | 30.0% | |
GTTTGACCCAAATAGTTAAA+AGG | + | chr4_2:46276572-46276591 | Msa0602570:three_prime_UTR | 30.0% | |
!! | TCTTTTAAAAAGACACCCTG+TGG | + | chr4_2:46267905-46267924 | Msa0602570:five_prime_UTR | 35.0% |
TAGGGATCGAAGAGAAATTA+GGG | - | chr4_2:46268079-46268098 | None:intergenic | 35.0% | |
TTAGGGATCGAAGAGAAATT+AGG | - | chr4_2:46268080-46268099 | None:intergenic | 35.0% | |
TTTCCGTTCTGTTATTGTTG+CGG | + | chr4_2:46268144-46268163 | Msa0602570:intron | 35.0% | |
ATTCCGCAACAATAACAGAA+CGG | - | chr4_2:46268150-46268169 | None:intergenic | 35.0% | |
TTCTGTTATTGTTGCGGAAT+CGG | + | chr4_2:46268150-46268169 | Msa0602570:intron | 35.0% | |
GTTGATATGTATAGTGCCTT+AGG | + | chr4_2:46268254-46268273 | Msa0602570:intron | 35.0% | |
! | GTTGTGTTCAGTTTTTGTTG+AGG | + | chr4_2:46268544-46268563 | Msa0602570:intron | 35.0% |
AGTGCTTCATAGGTTACATT+TGG | + | chr4_2:46268894-46268913 | Msa0602570:intron | 35.0% | |
! | GCCAAAGCTTTTATGTTTGA+AGG | + | chr4_2:46269274-46269293 | Msa0602570:intron | 35.0% |
TCCATCAGAAGATTTAGACT+TGG | - | chr4_2:46269485-46269504 | None:intergenic | 35.0% | |
AGTCTAAATCTTCTGATGGA+AGG | + | chr4_2:46269485-46269504 | Msa0602570:CDS | 35.0% | |
! | CGAAACCTTGTTTACATAGT+TGG | + | chr4_2:46269538-46269557 | Msa0602570:CDS | 35.0% |
GCAATCCAACTATGTAAACA+AGG | - | chr4_2:46269546-46269565 | None:intergenic | 35.0% | |
AAATAATCAAAGAGTGGAGG+AGG | - | chr4_2:46269604-46269623 | None:intergenic | 35.0% | |
CTGAAATAATCAAAGAGTGG+AGG | - | chr4_2:46269607-46269626 | None:intergenic | 35.0% | |
AAAACTCCGAATAGAAAACG+AGG | - | chr4_2:46269635-46269654 | None:intergenic | 35.0% | |
! | CGTTTTCTATTCGGAGTTTT+CGG | + | chr4_2:46269635-46269654 | Msa0602570:CDS | 35.0% |
!!! | GAGAGTATTTTGGTCAGTAT+GGG | + | chr4_2:46269716-46269735 | Msa0602570:CDS | 35.0% |
TACACACTGCAAGTTTCATT+AGG | - | chr4_2:46269796-46269815 | None:intergenic | 35.0% | |
GATTAAAGAAACTGCTAAGG+TGG | + | chr4_2:46270060-46270079 | Msa0602570:intron | 35.0% | |
GTCATTTCTTTACATAGCAC+GGG | + | chr4_2:46270195-46270214 | Msa0602570:intron | 35.0% | |
GATTAAAGAAACTGCTAAGG+TGG | + | chr4_2:46270060-46270079 | Msa0602570:intron | 35.0% | |
CAAACGAAGAGGAATCAATT+CGG | + | chr4_2:46270380-46270399 | Msa0602570:CDS | 35.0% | |
CGGTGTATTCAAAATGTACA+CGG | + | chr4_2:46270400-46270419 | Msa0602570:CDS | 35.0% | |
AGCAGATATGTGTACCTTAA+AGG | - | chr4_2:46270445-46270464 | None:intergenic | 35.0% | |
! | CCATGCATGACAATATTTTG+TGG | - | chr4_2:46270559-46270578 | None:intergenic | 35.0% |
CCACAAAATATTGTCATGCA+TGG | + | chr4_2:46270556-46270575 | Msa0602570:CDS | 35.0% | |
CGTGCAAATATAGACAATCA+GGG | - | chr4_2:46270691-46270710 | None:intergenic | 35.0% | |
TCGTGCAAATATAGACAATC+AGG | - | chr4_2:46270692-46270711 | None:intergenic | 35.0% | |
TGATTGTCTATATTTGCACG+AGG | + | chr4_2:46270691-46270710 | Msa0602570:CDS | 35.0% | |
AAATAATTTCCGCTTACACC+AGG | + | chr4_2:46270747-46270766 | Msa0602570:CDS | 35.0% | |
TTATTGGTCCAATCATCTAG+GGG | - | chr4_2:46271174-46271193 | None:intergenic | 35.0% | |
! | GGGCTTTTCTGTAGAATTAT+TGG | - | chr4_2:46271190-46271209 | None:intergenic | 35.0% |
! | GTTGGTGCACTTTTAACAAT+GGG | - | chr4_2:46271210-46271229 | None:intergenic | 35.0% |
!! | AGTTGGTGCACTTTTAACAA+TGG | - | chr4_2:46271211-46271230 | None:intergenic | 35.0% |
TATATAGGGACGTCAAAAAG+GGG | - | chr4_2:46271239-46271258 | None:intergenic | 35.0% | |
CTATATAGGGACGTCAAAAA+GGG | - | chr4_2:46271240-46271259 | None:intergenic | 35.0% | |
ACTATATAGGGACGTCAAAA+AGG | - | chr4_2:46271241-46271260 | None:intergenic | 35.0% | |
CGAAAATAGAGGGACTATAT+AGG | - | chr4_2:46271254-46271273 | None:intergenic | 35.0% | |
AAGCTAAAGCCGAAAATAGA+GGG | - | chr4_2:46271264-46271283 | None:intergenic | 35.0% | |
AAAGCTAAAGCCGAAAATAG+AGG | - | chr4_2:46271265-46271284 | None:intergenic | 35.0% | |
!! | TCTATTTTCGGCTTTAGCTT+TGG | + | chr4_2:46271264-46271283 | Msa0602570:intron | 35.0% |
TCACCTCCAAATGGAATTAA+TGG | + | chr4_2:46271436-46271455 | Msa0602570:CDS | 35.0% | |
CACCTCCAAATGGAATTAAT+GGG | + | chr4_2:46271437-46271456 | Msa0602570:CDS | 35.0% | |
TGTCTCCCATTAATTCCATT+TGG | - | chr4_2:46271445-46271464 | None:intergenic | 35.0% | |
CCAATGTTTATGTGTGTTAG+GGG | + | chr4_2:46271556-46271575 | Msa0602570:intron | 35.0% | |
!! | CTGTTGACTGTATCAGATTT+TGG | - | chr4_2:46271694-46271713 | None:intergenic | 35.0% |
AGAGTCGTAATACAATACCA+AGG | + | chr4_2:46271803-46271822 | Msa0602570:CDS | 35.0% | |
GAGTCGTAATACAATACCAA+GGG | + | chr4_2:46271804-46271823 | Msa0602570:CDS | 35.0% | |
ATATATTAGCATGGACAGTC+TGG | + | chr4_2:46271858-46271877 | Msa0602570:CDS | 35.0% | |
TTCTTTAAATTGACAGGCAC+AGG | - | chr4_2:46271922-46271941 | None:intergenic | 35.0% | |
TAAAGAACGAGTTGTCTTCT+CGG | + | chr4_2:46271935-46271954 | Msa0602570:CDS | 35.0% | |
CAAATTCCGTATCACTTCAT+TGG | - | chr4_2:46272073-46272092 | None:intergenic | 35.0% | |
AAATCTCCTCAAGTTCAAGA+AGG | + | chr4_2:46272162-46272181 | Msa0602570:CDS | 35.0% | |
AAAACTTCCACACCAGTTAA+TGG | + | chr4_2:46272240-46272259 | Msa0602570:CDS | 35.0% | |
!!! | TAATGGCGTTTTTAGTCCAA+AGG | + | chr4_2:46272257-46272276 | Msa0602570:CDS | 35.0% |
! | TTGTCTTTCTTATTTGCCCA+AGG | + | chr4_2:46272389-46272408 | Msa0602570:CDS | 35.0% |
ATCTTCCAATGATAGAGTTC+GGG | + | chr4_2:46272500-46272519 | Msa0602570:CDS | 35.0% | |
TACTTCGTGATGAAAGAAAC+AGG | + | chr4_2:46272601-46272620 | Msa0602570:CDS | 35.0% | |
TGTGATGCTGCTATTGATAA+GGG | + | chr4_2:46272669-46272688 | Msa0602570:CDS | 35.0% | |
TATATTATGCGGTGACGTTA+AGG | - | chr4_2:46272751-46272770 | None:intergenic | 35.0% | |
!! | ATGTTTTTAAAGGACAAGGC+TGG | - | chr4_2:46272803-46272822 | None:intergenic | 35.0% |
TGATTGAGTATGTGACTCTT+AGG | - | chr4_2:46272942-46272961 | None:intergenic | 35.0% | |
TCACATACTCAATCAGAATC+TGG | + | chr4_2:46272947-46272966 | Msa0602570:CDS | 35.0% | |
CACATACTCAATCAGAATCT+GGG | + | chr4_2:46272948-46272967 | Msa0602570:CDS | 35.0% | |
! | TTTGAGGAAGCTGAAAGTAT+AGG | + | chr4_2:46273029-46273048 | Msa0602570:CDS | 35.0% |
AAGCTAATGTAGCAAGTTCA+AGG | - | chr4_2:46273110-46273129 | None:intergenic | 35.0% | |
ATTCCAATACATTCAGCAAC+AGG | - | chr4_2:46273357-46273376 | None:intergenic | 35.0% | |
AAAAATGTACATGGCAAGCA+TGG | - | chr4_2:46273492-46273511 | None:intergenic | 35.0% | |
GATTAATGGAGAGCTATTAG+AGG | + | chr4_2:46273554-46273573 | Msa0602570:intron | 35.0% | |
TATCTAGAGAAGTCTATGGA+AGG | + | chr4_2:46273624-46273643 | Msa0602570:intron | 35.0% | |
TTCAATGATGATTGCTCTAC+GGG | + | chr4_2:46273698-46273717 | Msa0602570:intron | 35.0% | |
AAAATACCCTACCAGAAGAT+AGG | + | chr4_2:46273790-46273809 | Msa0602570:intron | 35.0% | |
AAATACCCTACCAGAAGATA+GGG | + | chr4_2:46273791-46273810 | Msa0602570:intron | 35.0% | |
!! | TTTATGTTGGTTCTAGACGA+AGG | + | chr4_2:46273918-46273937 | Msa0602570:intron | 35.0% |
! | CATGGTTTTTGAATTTTCCC+AGG | + | chr4_2:46274029-46274048 | Msa0602570:intron | 35.0% |
AGTTCCATCATACAAAGCAA+TGG | + | chr4_2:46274166-46274185 | Msa0602570:intron | 35.0% | |
TTCTCCATTGCTTTGTATGA+TGG | - | chr4_2:46274173-46274192 | None:intergenic | 35.0% | |
TTTATCACAAATCACACCCA+AGG | - | chr4_2:46274249-46274268 | None:intergenic | 35.0% | |
GGAAATTTCTCCATAAGTAG+AGG | - | chr4_2:46274279-46274298 | None:intergenic | 35.0% | |
! | TATAGGCTTTATAGTCGAGT+AGG | - | chr4_2:46274300-46274319 | None:intergenic | 35.0% |
TCAGTTCCATGCAACATTAT+AGG | - | chr4_2:46274317-46274336 | None:intergenic | 35.0% | |
GGCAGTAAAATAAACTAAGG+GGG | + | chr4_2:46274358-46274377 | Msa0602570:intron | 35.0% | |
! | GACATTTCTAGGAAAATTGG+AGG | + | chr4_2:46274490-46274509 | Msa0602570:intron | 35.0% |
GTTGAGAAAAGACTGTTCAT+GGG | - | chr4_2:46274628-46274647 | None:intergenic | 35.0% | |
AGTTTAAGAATGACATTCCC+GGG | - | chr4_2:46274693-46274712 | None:intergenic | 35.0% | |
GAGTTTAAGAATGACATTCC+CGG | - | chr4_2:46274694-46274713 | None:intergenic | 35.0% | |
TCTCATTTGTGCAACACTAA+GGG | - | chr4_2:46274717-46274736 | None:intergenic | 35.0% | |
TTCTCATTTGTGCAACACTA+AGG | - | chr4_2:46274718-46274737 | None:intergenic | 35.0% | |
GCTTTGTAAGAACCAAGTAA+TGG | + | chr4_2:46274800-46274819 | Msa0602570:intron | 35.0% | |
! | TACAACTGCAACTTCTAAAG+CGG | + | chr4_2:46274997-46275016 | Msa0602570:intron | 35.0% |
!! | TGCTTGATTCGTTGTTTTCA+AGG | + | chr4_2:46275021-46275040 | Msa0602570:intron | 35.0% |
CTGAGGTGAATTTCTCAAAA+AGG | - | chr4_2:46275397-46275416 | None:intergenic | 35.0% | |
CACAGGCGAAATTGAATTTA+TGG | + | chr4_2:46275443-46275462 | Msa0602570:CDS | 35.0% | |
TCCCAATTTCAGGAAATCTA+AGG | - | chr4_2:46275626-46275645 | None:intergenic | 35.0% | |
!!! | GGGAATACTTTTTCTCAACT+TGG | + | chr4_2:46275642-46275661 | Msa0602570:CDS | 35.0% |
! | TCTCAACTTGGTGATTCATA+TGG | + | chr4_2:46275654-46275673 | Msa0602570:CDS | 35.0% |
ATATGGTATTTCCTCAAGGT+TGG | + | chr4_2:46275671-46275690 | Msa0602570:CDS | 35.0% | |
!! | CTTTTGAGGAATGAAAGACT+TGG | + | chr4_2:46275828-46275847 | Msa0602570:CDS | 35.0% |
! | GGATTTAACAAGTTTTACCC+AGG | + | chr4_2:46275849-46275868 | Msa0602570:CDS | 35.0% |
TTGTAGATATCTCCAGAGTT+TGG | - | chr4_2:46275900-46275919 | None:intergenic | 35.0% | |
!! | ACATTTGGGATGTGACTTTT+TGG | + | chr4_2:46275924-46275943 | Msa0602570:exon | 35.0% |
TGTTGTGTTAATGTCGGAAA+TGG | + | chr4_2:46275953-46275972 | Msa0602570:three_prime_UTR | 35.0% | |
GTACTCATGACTGGTATATT+GGG | + | chr4_2:46276019-46276038 | Msa0602570:three_prime_UTR | 35.0% | |
CAGCCATAAATTACACTTCT+TGG | - | chr4_2:46276061-46276080 | None:intergenic | 35.0% | |
CAGAACTAAAAAGGAAAGAG+GGG | - | chr4_2:46276298-46276317 | None:intergenic | 35.0% | |
CCAGAACTAAAAAGGAAAGA+GGG | - | chr4_2:46276299-46276318 | None:intergenic | 35.0% | |
TCCAGAACTAAAAAGGAAAG+AGG | - | chr4_2:46276300-46276319 | None:intergenic | 35.0% | |
CTGCAAATCCAGAACTAAAA+AGG | - | chr4_2:46276307-46276326 | None:intergenic | 35.0% | |
!!! | CTTTTTAGTTCTGGATTTGC+AGG | + | chr4_2:46276305-46276324 | Msa0602570:three_prime_UTR | 35.0% |
GCTAACATGATCAAATTAGC+AGG | + | chr4_2:46276355-46276374 | Msa0602570:three_prime_UTR | 35.0% | |
TATCCTTGTGGTATGAAGTA+TGG | + | chr4_2:46276547-46276566 | Msa0602570:three_prime_UTR | 35.0% | |
ATCCTTGTGGTATGAAGTAT+GGG | + | chr4_2:46276548-46276567 | Msa0602570:three_prime_UTR | 35.0% | |
AAGAAGATGAAACTGTGAGG+AGG | - | chr4_2:46268015-46268034 | None:intergenic | 40.0% | |
GAGAAGAAGATGAAACTGTG+AGG | - | chr4_2:46268018-46268037 | None:intergenic | 40.0% | |
TAGGAGTTGAAGACTAACAG+TGG | - | chr4_2:46268048-46268067 | None:intergenic | 40.0% | |
AGGGAAATCATGAGTGATGA+AGG | + | chr4_2:46268564-46268583 | Msa0602570:exon | 40.0% | |
TCATGAGTGATGAAGGAGAA+AGG | + | chr4_2:46268571-46268590 | Msa0602570:exon | 40.0% | |
! | TGCTGAAGAGATGGATTTGA+CGG | + | chr4_2:46268608-46268627 | Msa0602570:CDS | 40.0% |
CTTGATTGCAGATCTGTGTA+TGG | + | chr4_2:46269086-46269105 | Msa0602570:intron | 40.0% | |
GCCAAGTCTAAATCTTCTGA+TGG | + | chr4_2:46269481-46269500 | Msa0602570:CDS | 40.0% | |
TTACATAGTTGGATTGCCTC+TGG | + | chr4_2:46269549-46269568 | Msa0602570:CDS | 40.0% | |
!!! | CGAGAGTATTTTGGTCAGTA+TGG | + | chr4_2:46269715-46269734 | Msa0602570:CDS | 40.0% |
!!! | GTATTTTGGTCAGTATGGGA+AGG | + | chr4_2:46269720-46269739 | Msa0602570:CDS | 40.0% |
!! | AAAAGTGTCAATGTCACGGA+CGG | + | chr4_2:46269747-46269766 | Msa0602570:CDS | 40.0% |
TAAAGAAACTGCTAAGGTGG+AGG | + | chr4_2:46270063-46270082 | Msa0602570:intron | 40.0% | |
AAAGAAACTGCTAAGGTGGA+GGG | + | chr4_2:46270064-46270083 | Msa0602570:intron | 40.0% | |
CGGGATTAAAGAAACTGCTA+AGG | + | chr4_2:46270214-46270233 | Msa0602570:intron | 40.0% | |
TAAAGAAACTGCTAAGGTGG+AGG | + | chr4_2:46270063-46270082 | Msa0602570:intron | 40.0% | |
AAAGAAACTGCTAAGGTGGA+GGG | + | chr4_2:46270064-46270083 | Msa0602570:intron | 40.0% | |
AAGGAGTCATATGGAGAAAG+GGG | - | chr4_2:46270252-46270271 | None:intergenic | 40.0% | |
CAAGGAGTCATATGGAGAAA+GGG | - | chr4_2:46270253-46270272 | None:intergenic | 40.0% | |
!!! | TGTACACGGATTTGTTTTGG+AGG | + | chr4_2:46270414-46270433 | Msa0602570:CDS | 40.0% |
!!! | GTACACGGATTTGTTTTGGA+GGG | + | chr4_2:46270415-46270434 | Msa0602570:CDS | 40.0% |
! | GTATGTTTCAGGGCATGTTT+TGG | + | chr4_2:46270531-46270550 | Msa0602570:intron | 40.0% |
TGTCTATATTTGCACGAGGT+TGG | + | chr4_2:46270695-46270714 | Msa0602570:CDS | 40.0% | |
AGAACATTACCTGGTGTAAG+CGG | - | chr4_2:46270759-46270778 | None:intergenic | 40.0% | |
AGAACATTGCCTAGTGTAAG+CGG | - | chr4_2:46270791-46270810 | None:intergenic | 40.0% | |
!! | CGTTTTGTTCTGAGTTCTGA+TGG | + | chr4_2:46270944-46270963 | Msa0602570:intron | 40.0% |
CTGAAGCCTAAATCAGAACA+TGG | - | chr4_2:46270993-46271012 | None:intergenic | 40.0% | |
GTGTCACAAACAGTATGCAA+CGG | + | chr4_2:46271124-46271143 | Msa0602570:CDS | 40.0% | |
GTAAGAAGTTCACCTCCAAA+TGG | + | chr4_2:46271427-46271446 | Msa0602570:CDS | 40.0% | |
CTCCCATTAATTCCATTTGG+AGG | - | chr4_2:46271442-46271461 | None:intergenic | 40.0% | |
CCCCTAACACACATAAACAT+TGG | - | chr4_2:46271559-46271578 | None:intergenic | 40.0% | |
ATGTGATAAACCTCCAACAG+GGG | - | chr4_2:46271605-46271624 | None:intergenic | 40.0% | |
GATGTGATAAACCTCCAACA+GGG | - | chr4_2:46271606-46271625 | None:intergenic | 40.0% | |
!! | CTGTTGACTGTATCAGGTTT+TGG | - | chr4_2:46271646-46271665 | None:intergenic | 40.0% |
!!! | TATCAGATTTTGGCTTGGAC+AGG | - | chr4_2:46271684-46271703 | None:intergenic | 40.0% |
!!! | GACTGTATCAGATTTTGGCT+TGG | - | chr4_2:46271689-46271708 | None:intergenic | 40.0% |
! | TGCCTTTTCTACTGCTGTTA+CGG | + | chr4_2:46271720-46271739 | Msa0602570:CDS | 40.0% |
CGACTCTCATCATTCAATAG+TGG | - | chr4_2:46271790-46271809 | None:intergenic | 40.0% | |
! | ACTGGACATTCTTTTAGCAC+CGG | + | chr4_2:46272024-46272043 | Msa0602570:CDS | 40.0% |
CTGCTACCAATGAAGTGATA+CGG | + | chr4_2:46272064-46272083 | Msa0602570:CDS | 40.0% | |
GTTAATTGAGGAGAACTCAC+TGG | - | chr4_2:46272097-46272116 | None:intergenic | 40.0% | |
TCAAGACATATTCAGTAGGC+AGG | - | chr4_2:46272140-46272159 | None:intergenic | 40.0% | |
TGTGATCCTTCTTGAACTTG+AGG | - | chr4_2:46272171-46272190 | None:intergenic | 40.0% | |
! | AACTGGTGTGGAAGTTTTAC+CGG | - | chr4_2:46272238-46272257 | None:intergenic | 40.0% |
AAAAACGCCATTAACTGGTG+TGG | - | chr4_2:46272250-46272269 | None:intergenic | 40.0% | |
GGACTAAAAACGCCATTAAC+TGG | - | chr4_2:46272255-46272274 | None:intergenic | 40.0% | |
TTTAGTCCAAAGGAACAGTG+TGG | + | chr4_2:46272267-46272286 | Msa0602570:CDS | 40.0% | |
CACCATACTGCATTAGACAA+GGG | - | chr4_2:46272449-46272468 | None:intergenic | 40.0% | |
TCACCATACTGCATTAGACA+AGG | - | chr4_2:46272450-46272469 | None:intergenic | 40.0% | |
ACATCATTTCCAGCAGTACA+AGG | - | chr4_2:46272474-46272493 | None:intergenic | 40.0% | |
TTCATCCCGAACTCTATCAT+TGG | - | chr4_2:46272508-46272527 | None:intergenic | 40.0% | |
TCGTCTAGCATGGTATGTAA+TGG | + | chr4_2:46272540-46272559 | Msa0602570:CDS | 40.0% | |
GGCTATCCTGAGAAATTGAT+CGG | + | chr4_2:46272561-46272580 | Msa0602570:CDS | 40.0% | |
TATCCTGAGAAATTGATCGG+TGG | + | chr4_2:46272564-46272583 | Msa0602570:CDS | 40.0% | |
GAAAGAAACAGGCAAAGCAT+TGG | + | chr4_2:46272612-46272631 | Msa0602570:CDS | 40.0% | |
!! | CAAAGCATTGGAAGGTTAGT+TGG | + | chr4_2:46272624-46272643 | Msa0602570:CDS | 40.0% |
GTGTGATGCTGCTATTGATA+AGG | + | chr4_2:46272668-46272687 | Msa0602570:CDS | 40.0% | |
! | AGTCAAGGTTCTCTTTTGCA+AGG | + | chr4_2:46272853-46272872 | Msa0602570:CDS | 40.0% |
CTTTCCTACCAGTAACTTTG+AGG | + | chr4_2:46273013-46273032 | Msa0602570:CDS | 40.0% | |
TTCAGCTTCCTCAAAGTTAC+TGG | - | chr4_2:46273024-46273043 | None:intergenic | 40.0% | |
!! | AAGCTTGTTGGAAGAAGCAA+TGG | - | chr4_2:46273066-46273085 | None:intergenic | 40.0% |
ATACTCACCAGAAAGCTTGT+TGG | - | chr4_2:46273078-46273097 | None:intergenic | 40.0% | |
CAGATGATCAGATTTGTCAC+TGG | - | chr4_2:46273149-46273168 | None:intergenic | 40.0% | |
CGAGTATCTAGAGAAGTCTA+TGG | + | chr4_2:46273620-46273639 | Msa0602570:intron | 40.0% | |
!! | TGCATTTTGAGTAAGATGGG+GGG | - | chr4_2:46273724-46273743 | None:intergenic | 40.0% |
!! | CTGCATTTTGAGTAAGATGG+GGG | - | chr4_2:46273725-46273744 | None:intergenic | 40.0% |
!! | CCTGCATTTTGAGTAAGATG+GGG | - | chr4_2:46273726-46273745 | None:intergenic | 40.0% |
!! | CCCTGCATTTTGAGTAAGAT+GGG | - | chr4_2:46273727-46273746 | None:intergenic | 40.0% |
CCCATCTTACTCAAAATGCA+GGG | + | chr4_2:46273724-46273743 | Msa0602570:intron | 40.0% | |
!! | TCCCTGCATTTTGAGTAAGA+TGG | - | chr4_2:46273728-46273747 | None:intergenic | 40.0% |
AACAAAGGAGAAACAAGCCA+GGG | + | chr4_2:46274001-46274020 | Msa0602570:intron | 40.0% | |
TCAAAAACCATGTTTCTCCC+TGG | - | chr4_2:46274021-46274040 | None:intergenic | 40.0% | |
! | GAAATGAGACACTTTTGGTG+TGG | - | chr4_2:46274137-46274156 | None:intergenic | 40.0% |
ATACCAACCAGAATCCAAGT+AGG | + | chr4_2:46274203-46274222 | Msa0602570:intron | 40.0% | |
TACCAACCAGAATCCAAGTA+GGG | + | chr4_2:46274204-46274223 | Msa0602570:intron | 40.0% | |
TCCAAGTAGGGTAGATGAAA+TGG | + | chr4_2:46274216-46274235 | Msa0602570:intron | 40.0% | |
TCCATTTCATCTACCCTACT+TGG | - | chr4_2:46274220-46274239 | None:intergenic | 40.0% | |
ATGAAATGGAGCAATGCCTT+GGG | + | chr4_2:46274230-46274249 | Msa0602570:intron | 40.0% | |
ATGTCAGGCAGTAAAAAGTC+AGG | + | chr4_2:46274337-46274356 | Msa0602570:intron | 40.0% | |
TTACCAGGAATATCCTACTC+AGG | + | chr4_2:46274405-46274424 | Msa0602570:intron | 40.0% | |
ATTCCTGAGTAGGATATTCC+TGG | - | chr4_2:46274411-46274430 | None:intergenic | 40.0% | |
TTATTCCCGTATGAGAAGGT+GGG | - | chr4_2:46274563-46274582 | None:intergenic | 40.0% | |
ACCTTCTCATACGGGAATAA+GGG | + | chr4_2:46274563-46274582 | Msa0602570:intron | 40.0% | |
TACGGGAATAAGGGAAATCA+CGG | + | chr4_2:46274572-46274591 | Msa0602570:intron | 40.0% | |
AAGACTGTTCATGGGTACAA+AGG | - | chr4_2:46274620-46274639 | None:intergenic | 40.0% | |
GGTTGAGAAAAGACTGTTCA+TGG | - | chr4_2:46274629-46274648 | None:intergenic | 40.0% | |
ATTCCCTAGCTATGTATTCC+CGG | + | chr4_2:46274672-46274691 | Msa0602570:intron | 40.0% | |
CTCATTTGTGCAACACTAAG+GGG | - | chr4_2:46274716-46274735 | None:intergenic | 40.0% | |
AATGTTAACAAACTGTGGCC+TGG | + | chr4_2:46274736-46274755 | Msa0602570:intron | 40.0% | |
GTTCTTACAAAGCCCTATGA+TGG | - | chr4_2:46274793-46274812 | None:intergenic | 40.0% | |
ACCAAGTAATGGCTCGTAAA+AGG | + | chr4_2:46274811-46274830 | Msa0602570:intron | 40.0% | |
! | ACCTTTTACGAGCCATTACT+TGG | - | chr4_2:46274815-46274834 | None:intergenic | 40.0% |
CTTGGAATTGAAAATCCTGG+TGG | - | chr4_2:46275205-46275224 | None:intergenic | 40.0% | |
CTGCTTGGAATTGAAAATCC+TGG | - | chr4_2:46275208-46275227 | None:intergenic | 40.0% | |
! | CAGGATTTTCAATTCCAAGC+AGG | + | chr4_2:46275206-46275225 | Msa0602570:CDS | 40.0% |
CAGATAGGGAGTCAAAAAAC+TGG | - | chr4_2:46275270-46275289 | None:intergenic | 40.0% | |
!!! | CAGTTTTTTGACTCCCTATC+TGG | + | chr4_2:46275268-46275287 | Msa0602570:CDS | 40.0% |
ACACTCTCAGCTGGAAATAT+TGG | + | chr4_2:46275417-46275436 | Msa0602570:CDS | 40.0% | |
TGCACAAAACAGTCAATCAC+TGG | + | chr4_2:46275506-46275525 | Msa0602570:CDS | 40.0% | |
GTGCTAGAGTTCTTTGCATT+AGG | - | chr4_2:46275593-46275612 | None:intergenic | 40.0% | |
CATAGACAACTGAGGATAAG+GGG | - | chr4_2:46275721-46275740 | None:intergenic | 40.0% | |
GCATAGACAACTGAGGATAA+GGG | - | chr4_2:46275722-46275741 | None:intergenic | 40.0% | |
TGCATAGACAACTGAGGATA+AGG | - | chr4_2:46275723-46275742 | None:intergenic | 40.0% | |
CATTGGCCATTTGACAAGAT+TGG | - | chr4_2:46275759-46275778 | None:intergenic | 40.0% | |
CAATCTTGTCAAATGGCCAA+TGG | + | chr4_2:46275757-46275776 | Msa0602570:CDS | 40.0% | |
TTGTCAAATGGCCAATGGAA+TGG | + | chr4_2:46275762-46275781 | Msa0602570:CDS | 40.0% | |
TGTCAAATGGCCAATGGAAT+GGG | + | chr4_2:46275763-46275782 | Msa0602570:CDS | 40.0% | |
AAATATCGGATGCCAAACTC+TGG | + | chr4_2:46275885-46275904 | Msa0602570:CDS | 40.0% | |
ATGTCGGAAATGGTAAAACC+TGG | + | chr4_2:46275963-46275982 | Msa0602570:three_prime_UTR | 40.0% | |
ATGGTAAAACCTGGCAGAAA+TGG | + | chr4_2:46275972-46275991 | Msa0602570:three_prime_UTR | 40.0% | |
AAAATCTGTCCATTTCTGCC+AGG | - | chr4_2:46275984-46276003 | None:intergenic | 40.0% | |
! | AGATTTTGTGCAGCTATGGA+TGG | + | chr4_2:46275997-46276016 | Msa0602570:three_prime_UTR | 40.0% |
GGTACTCATGACTGGTATAT+TGG | + | chr4_2:46276018-46276037 | Msa0602570:three_prime_UTR | 40.0% | |
CACTTCTTGGGATCATCATT+AGG | - | chr4_2:46276048-46276067 | None:intergenic | 40.0% | |
GTGTAATTTATGGCTGCAGT+TGG | + | chr4_2:46276065-46276084 | Msa0602570:three_prime_UTR | 40.0% | |
!!! | CCCTCTTTCCTTTTTAGTTC+TGG | + | chr4_2:46276296-46276315 | Msa0602570:three_prime_UTR | 40.0% |
!! | ATTTGCAGGTGAGCTGTTTT+GGG | + | chr4_2:46276319-46276338 | Msa0602570:three_prime_UTR | 40.0% |
TCCTTGTGGTATGAAGTATG+GGG | + | chr4_2:46276549-46276568 | Msa0602570:three_prime_UTR | 40.0% | |
!! | AGAGAGAAGAAGGTGCTGTT+TGG | - | chr4_2:46267884-46267903 | None:intergenic | 45.0% |
GAGAGAAAGAGAGAGCGATA+TGG | - | chr4_2:46267949-46267968 | None:intergenic | 45.0% | |
CAGTTGAAACCTTGCAGATG+TGG | + | chr4_2:46268636-46268655 | Msa0602570:CDS | 45.0% | |
ACCTTGCAGATGTGGTTATG+AGG | + | chr4_2:46268644-46268663 | Msa0602570:CDS | 45.0% | |
ACCTCATAACCACATCTGCA+AGG | - | chr4_2:46268648-46268667 | None:intergenic | 45.0% | |
TTGTCGTGTCAGTGCTTCAT+AGG | + | chr4_2:46268884-46268903 | Msa0602570:intron | 45.0% | |
TGCAGATCTGTGTATGGTGT+TGG | + | chr4_2:46269092-46269111 | Msa0602570:intron | 45.0% | |
!! | ATGGTGTTGGCACCACATAA+TGG | + | chr4_2:46269105-46269124 | Msa0602570:CDS | 45.0% |
!! | TTGGCACCACATAATGGACA+TGG | + | chr4_2:46269111-46269130 | Msa0602570:CDS | 45.0% |
TCTCAGCCATGTCCATTATG+TGG | - | chr4_2:46269120-46269139 | None:intergenic | 45.0% | |
!! | CATAATGGACATGGCTGAGA+AGG | + | chr4_2:46269120-46269139 | Msa0602570:CDS | 45.0% |
CATGGCTGAGAAGGATGATA+CGG | + | chr4_2:46269129-46269148 | Msa0602570:CDS | 45.0% | |
CTGAGAAGGATGATACGGAT+GGG | + | chr4_2:46269134-46269153 | Msa0602570:CDS | 45.0% | |
! | GTGTCGTTCTCCTTATGACA+AGG | + | chr4_2:46269168-46269187 | Msa0602570:CDS | 45.0% |
GGAAAAGATTGTTGGGACAG+CGG | + | chr4_2:46269189-46269208 | Msa0602570:CDS | 45.0% | |
!!! | CTCCAGAAGCGAGAGTATTT+TGG | + | chr4_2:46269706-46269725 | Msa0602570:CDS | 45.0% |
GACCAAAATACTCTCGCTTC+TGG | - | chr4_2:46269711-46269730 | None:intergenic | 45.0% | |
AAGGAGTCAGATGGAGAAAG+GGG | - | chr4_2:46270095-46270114 | None:intergenic | 45.0% | |
CAAGGAGTCAGATGGAGAAA+GGG | - | chr4_2:46270096-46270115 | None:intergenic | 45.0% | |
GCAAGGAGTCATATGGAGAA+AGG | - | chr4_2:46270254-46270273 | None:intergenic | 45.0% | |
!! | TTTTGGAGGGCAGACCTTTA+AGG | + | chr4_2:46270428-46270447 | Msa0602570:CDS | 45.0% |
ACACATCTTACTCATGTCCC+TGG | + | chr4_2:46270472-46270491 | Msa0602570:intron | 45.0% | |
!! | AGACAATCAGGGTTGATGCA+AGG | - | chr4_2:46270680-46270699 | None:intergenic | 45.0% |
AGTCGAGTTCAACAGATCAC+TGG | + | chr4_2:46271102-46271121 | Msa0602570:CDS | 45.0% | |
TCACAAACAGTATGCAACGG+CGG | + | chr4_2:46271127-46271146 | Msa0602570:CDS | 45.0% | |
GTCAAAAAGGGGCTTACAGT+TGG | - | chr4_2:46271228-46271247 | None:intergenic | 45.0% | |
TGATACATACCAAGCAGCAC+TGG | - | chr4_2:46271482-46271501 | None:intergenic | 45.0% | |
TGTGATAAACCTCCAACAGG+GGG | - | chr4_2:46271604-46271623 | None:intergenic | 45.0% | |
GGATGTGATAAACCTCCAAC+AGG | - | chr4_2:46271607-46271626 | None:intergenic | 45.0% | |
!!! | GTATCAGGTTTTGGCTTGGA+CGG | - | chr4_2:46271637-46271656 | None:intergenic | 45.0% |
!!! | GACTGTATCAGGTTTTGGCT+TGG | - | chr4_2:46271641-46271660 | None:intergenic | 45.0% |
! | GCCTTTTCTACTGCTGTTAC+GGG | + | chr4_2:46271721-46271740 | Msa0602570:CDS | 45.0% |
! | CCTTTTCTACTGCTGTTACG+GGG | + | chr4_2:46271722-46271741 | Msa0602570:CDS | 45.0% |
CAGCACAATGTGATGGTTCA+AGG | + | chr4_2:46271761-46271780 | Msa0602570:CDS | 45.0% | |
CACAATGTGATGGTTCAAGG+AGG | + | chr4_2:46271764-46271783 | Msa0602570:CDS | 45.0% | |
CTGTCACTATCTCGTGACAA+TGG | - | chr4_2:46271961-46271980 | None:intergenic | 45.0% | |
TTGTCACGAGATAGTGACAG+AGG | + | chr4_2:46271961-46271980 | Msa0602570:CDS | 45.0% | |
TATTCAGTAGGCAGGCTACT+AGG | - | chr4_2:46272132-46272151 | None:intergenic | 45.0% | |
!! | CGGCTGTATTGGTTGTTATC+GGG | - | chr4_2:46272218-46272237 | None:intergenic | 45.0% |
!! | CCGGCTGTATTGGTTGTTAT+CGG | - | chr4_2:46272219-46272238 | None:intergenic | 45.0% |
CCGATAACAACCAATACAGC+CGG | + | chr4_2:46272216-46272235 | Msa0602570:CDS | 45.0% | |
!! | GGAAGTTTTACCGGCTGTAT+TGG | - | chr4_2:46272229-46272248 | None:intergenic | 45.0% |
AGCCCTTGTCTAATGCAGTA+TGG | + | chr4_2:46272444-46272463 | Msa0602570:CDS | 45.0% | |
TATGGTGAACCTTGTACTGC+TGG | + | chr4_2:46272462-46272481 | Msa0602570:CDS | 45.0% | |
!! | GAAACAGGCAAAGCATTGGA+AGG | + | chr4_2:46272616-46272635 | Msa0602570:CDS | 45.0% |
!! | GAAGGTTAGTTGGTGATGCT+GGG | + | chr4_2:46272634-46272653 | Msa0602570:CDS | 45.0% |
ATCCCAGGGATCAAAATCGA+GGG | - | chr4_2:46272724-46272743 | None:intergenic | 45.0% | |
! | AAGGTTCTCTTTTGCAAGGC+AGG | + | chr4_2:46272857-46272876 | Msa0602570:CDS | 45.0% |
! | TGCTGGCTGACAGTATAAGA+CGG | - | chr4_2:46272915-46272934 | None:intergenic | 45.0% |
TGAGTATGTGACTCTTAGGC+TGG | - | chr4_2:46272938-46272957 | None:intergenic | 45.0% | |
GAGAAGTTGGGCATAGCAAA+TGG | + | chr4_2:46272990-46273009 | Msa0602570:CDS | 45.0% | |
GCTTCCTCAAAGTTACTGGT+AGG | - | chr4_2:46273020-46273039 | None:intergenic | 45.0% | |
GCTTCTTCCAACAAGCTTTC+TGG | + | chr4_2:46273068-46273087 | Msa0602570:CDS | 45.0% | |
! | TTTTGTGTGGTGCTTGCCAT+AGG | + | chr4_2:46273206-46273225 | Msa0602570:intron | 45.0% |
TTTGTGTGGTGCTTGCCATA+GGG | + | chr4_2:46273207-46273226 | Msa0602570:intron | 45.0% | |
! | AGGATTTGATAACCTGCGCA+TGG | + | chr4_2:46273574-46273593 | Msa0602570:intron | 45.0% |
! | GGATTTGATAACCTGCGCAT+GGG | + | chr4_2:46273575-46273594 | Msa0602570:intron | 45.0% |
CCCCATCTTACTCAAAATGC+AGG | + | chr4_2:46273723-46273742 | Msa0602570:intron | 45.0% | |
ACTGGAATCCATCTTCTGGT+AGG | - | chr4_2:46273755-46273774 | None:intergenic | 45.0% | |
! | ACCAGAAGATGGATTCCAGT+AGG | + | chr4_2:46273755-46273774 | Msa0602570:intron | 45.0% |
ACCTACTGGAATCCATCTTC+TGG | - | chr4_2:46273759-46273778 | None:intergenic | 45.0% | |
GAACAAAGGAGAAACAAGCC+AGG | + | chr4_2:46274000-46274019 | Msa0602570:intron | 45.0% | |
AAACAAGCCAGGGAGAAACA+TGG | + | chr4_2:46274011-46274030 | Msa0602570:intron | 45.0% | |
TACCCTACTTGGATTCTGGT+TGG | - | chr4_2:46274209-46274228 | None:intergenic | 45.0% | |
CATCTACCCTACTTGGATTC+TGG | - | chr4_2:46274213-46274232 | None:intergenic | 45.0% | |
GATGAAATGGAGCAATGCCT+TGG | + | chr4_2:46274229-46274248 | Msa0602570:intron | 45.0% | |
GTTGCATGGAACTGAATGTC+AGG | + | chr4_2:46274322-46274341 | Msa0602570:intron | 45.0% | |
CACATTCCCACCTTCTCATA+CGG | + | chr4_2:46274554-46274573 | Msa0602570:intron | 45.0% | |
ACATTCCCACCTTCTCATAC+GGG | + | chr4_2:46274555-46274574 | Msa0602570:intron | 45.0% | |
CTTATTCCCGTATGAGAAGG+TGG | - | chr4_2:46274564-46274583 | None:intergenic | 45.0% | |
CACCTTCTCATACGGGAATA+AGG | + | chr4_2:46274562-46274581 | Msa0602570:intron | 45.0% | |
TCCCTTATTCCCGTATGAGA+AGG | - | chr4_2:46274567-46274586 | None:intergenic | 45.0% | |
ACGGGAATAAGGGAAATCAC+GGG | + | chr4_2:46274573-46274592 | Msa0602570:intron | 45.0% | |
TTCATGGGTACAAAGGTTCC+CGG | - | chr4_2:46274613-46274632 | None:intergenic | 45.0% | |
TTCCCTAGCTATGTATTCCC+GGG | + | chr4_2:46274673-46274692 | Msa0602570:intron | 45.0% | |
TTCCCGGGAATACATAGCTA+GGG | - | chr4_2:46274678-46274697 | None:intergenic | 45.0% | |
ATTCCCGGGAATACATAGCT+AGG | - | chr4_2:46274679-46274698 | None:intergenic | 45.0% | |
TCATGCGAAGAAAATCCAGG+AGG | - | chr4_2:46275238-46275257 | None:intergenic | 45.0% | |
CTCTCATGCGAAGAAAATCC+AGG | - | chr4_2:46275241-46275260 | None:intergenic | 45.0% | |
CTCTCAGCTGGAAATATTGG+TGG | + | chr4_2:46275420-46275439 | Msa0602570:CDS | 45.0% | |
!!! | GATCCTGCTATTTTGGCAGT+TGG | + | chr4_2:46275465-46275484 | Msa0602570:CDS | 45.0% |
TTGCCAACTGCCAAAATAGC+AGG | - | chr4_2:46275471-46275490 | None:intergenic | 45.0% | |
!!! | TGCTATTTTGGCAGTTGGCA+AGG | + | chr4_2:46275470-46275489 | Msa0602570:CDS | 45.0% |
!!! | GCTATTTTGGCAGTTGGCAA+GGG | + | chr4_2:46275471-46275490 | Msa0602570:CDS | 45.0% |
!!! | CTATTTTGGCAGTTGGCAAG+GGG | + | chr4_2:46275472-46275491 | Msa0602570:CDS | 45.0% |
ACAGTCAATCACTGGACGTA+CGG | + | chr4_2:46275514-46275533 | Msa0602570:CDS | 45.0% | |
TTGAGACTGATCCAACCTTG+AGG | - | chr4_2:46275685-46275704 | None:intergenic | 45.0% | |
! | GGACAGATTTTGTGCAGCTA+TGG | + | chr4_2:46275993-46276012 | Msa0602570:three_prime_UTR | 45.0% |
CTATGGATGGTACTCATGAC+TGG | + | chr4_2:46276010-46276029 | Msa0602570:three_prime_UTR | 45.0% | |
ACCTGGTGACAAAACGAGAA+TGG | + | chr4_2:46276175-46276194 | Msa0602570:three_prime_UTR | 45.0% | |
! | TCCATTCTCGTTTTGTCACC+AGG | - | chr4_2:46276179-46276198 | None:intergenic | 45.0% |
! | GATTTGCAGGTGAGCTGTTT+TGG | + | chr4_2:46276318-46276337 | Msa0602570:three_prime_UTR | 45.0% |
!! | TTTGCAGGTGAGCTGTTTTG+GGG | + | chr4_2:46276320-46276339 | Msa0602570:three_prime_UTR | 45.0% |
CCTTGTGGTATGAAGTATGG+GGG | + | chr4_2:46276550-46276569 | Msa0602570:three_prime_UTR | 45.0% | |
!! | TTAGCAGTGGATTAGCGTCT+TGG | + | chr4_2:46276602-46276621 | Msa0602570:three_prime_UTR | 45.0% |
TCCTCTCTGTGCTGAAGAGA+TGG | + | chr4_2:46268599-46268618 | Msa0602570:CDS | 50.0% | |
TCCATCTCTTCAGCACAGAG+AGG | - | chr4_2:46268603-46268622 | None:intergenic | 50.0% | |
GCTGAGAAGGATGATACGGA+TGG | + | chr4_2:46269133-46269152 | Msa0602570:CDS | 50.0% | |
CATAAGGAGAACGACACGCA+GGG | - | chr4_2:46269165-46269184 | None:intergenic | 50.0% | |
TCATAAGGAGAACGACACGC+AGG | - | chr4_2:46269166-46269185 | None:intergenic | 50.0% | |
GGACAGCGGCAAAATGTGAA+AGG | + | chr4_2:46269203-46269222 | Msa0602570:CDS | 50.0% | |
AGTTGGATTGCCTCTGGATC+TGG | + | chr4_2:46269555-46269574 | Msa0602570:CDS | 50.0% | |
TCTTCATCTGCCAGATCCAG+AGG | - | chr4_2:46269568-46269587 | None:intergenic | 50.0% | |
GCAAGGAGTCAGATGGAGAA+AGG | - | chr4_2:46270097-46270116 | None:intergenic | 50.0% | |
GCTACTATAGCACTGCAGCA+AGG | - | chr4_2:46270114-46270133 | None:intergenic | 50.0% | |
CACTGCAGCAAGGAGTCATA+TGG | - | chr4_2:46270261-46270280 | None:intergenic | 50.0% | |
TCATGCATGGCTCCGAAATG+CGG | + | chr4_2:46270569-46270588 | Msa0602570:CDS | 50.0% | |
!! | AATCAGGGTTGATGCAAGGC+TGG | - | chr4_2:46270676-46270695 | None:intergenic | 50.0% |
TACCTCCTCCCCTAGATGAT+TGG | + | chr4_2:46271163-46271182 | Msa0602570:CDS | 50.0% | |
TTGGTCCAATCATCTAGGGG+AGG | - | chr4_2:46271171-46271190 | None:intergenic | 50.0% | |
!! | ACATACCAAGCAGCACTGGT+GGG | - | chr4_2:46271478-46271497 | None:intergenic | 50.0% |
! | TACATACCAAGCAGCACTGG+TGG | - | chr4_2:46271479-46271498 | None:intergenic | 50.0% |
! | TATGTGTGTTAGGGGCACAC+AGG | + | chr4_2:46271564-46271583 | Msa0602570:intron | 50.0% |
! | TGCGTGCTGTTGACTGTATC+AGG | - | chr4_2:46271652-46271671 | None:intergenic | 50.0% |
!! | TTTGGCTTGGACAGGACAGA+GGG | - | chr4_2:46271676-46271695 | None:intergenic | 50.0% |
!!! | TTTTGGCTTGGACAGGACAG+AGG | - | chr4_2:46271677-46271696 | None:intergenic | 50.0% |
CCCCGTAACAGCAGTAGAAA+AGG | - | chr4_2:46271725-46271744 | None:intergenic | 50.0% | |
GCTTCTGCAGCACAATGTGA+TGG | + | chr4_2:46271754-46271773 | Msa0602570:CDS | 50.0% | |
GGCATTTCACTCTTCACCCT+TGG | - | chr4_2:46271823-46271842 | None:intergenic | 50.0% | |
!!! | TTCTTTTAGCACCGGTCCAG+AGG | + | chr4_2:46272032-46272051 | Msa0602570:CDS | 50.0% |
AGTCCAAAGGAACAGTGTGG+AGG | + | chr4_2:46272270-46272289 | Msa0602570:CDS | 50.0% | |
GTCCAAAGGAACAGTGTGGA+GGG | + | chr4_2:46272271-46272290 | Msa0602570:CDS | 50.0% | |
ATCCCTCCACACTGTTCCTT+TGG | - | chr4_2:46272276-46272295 | None:intergenic | 50.0% | |
GGAACAGTGTGGAGGGATAT+TGG | + | chr4_2:46272278-46272297 | Msa0602570:CDS | 50.0% | |
CTGCCACCGATCAATTTCTC+AGG | - | chr4_2:46272570-46272589 | None:intergenic | 50.0% | |
! | TTGATCGGTGGCAGCTCTAA+TGG | + | chr4_2:46272576-46272595 | Msa0602570:CDS | 50.0% |
!! | GGAAGGTTAGTTGGTGATGC+TGG | + | chr4_2:46272633-46272652 | Msa0602570:CDS | 50.0% |
!! | TGTCCCTCGATTTTGATCCC+TGG | + | chr4_2:46272718-46272737 | Msa0602570:CDS | 50.0% |
!! | GTCCCTCGATTTTGATCCCT+GGG | + | chr4_2:46272719-46272738 | Msa0602570:CDS | 50.0% |
CATCCCAGGGATCAAAATCG+AGG | - | chr4_2:46272725-46272744 | None:intergenic | 50.0% | |
GACGTTAAGGAGTCATCCCA+GGG | - | chr4_2:46272738-46272757 | None:intergenic | 50.0% | |
TGACGTTAAGGAGTCATCCC+AGG | - | chr4_2:46272739-46272758 | None:intergenic | 50.0% | |
CATCAATGAAACCCATGCGC+AGG | - | chr4_2:46273589-46273608 | None:intergenic | 50.0% | |
GCGCATGGGTTTCATTGATG+TGG | + | chr4_2:46273589-46273608 | Msa0602570:intron | 50.0% | |
GGGAAACACCTACCAGAAGA+TGG | + | chr4_2:46273744-46273763 | Msa0602570:intron | 50.0% | |
GCAGACCCTATCTTCTGGTA+GGG | - | chr4_2:46273799-46273818 | None:intergenic | 50.0% | |
AGCAGACCCTATCTTCTGGT+AGG | - | chr4_2:46273800-46273819 | None:intergenic | 50.0% | |
TACCAGAAGATAGGGTCTGC+TGG | + | chr4_2:46273799-46273818 | Msa0602570:intron | 50.0% | |
ACCAGAAGATAGGGTCTGCT+GGG | + | chr4_2:46273800-46273819 | Msa0602570:intron | 50.0% | |
GGGGGGATAACAGAGCAATA+CGG | + | chr4_2:46273824-46273843 | Msa0602570:intron | 50.0% | |
GGGGGATAACAGAGCAATAC+GGG | + | chr4_2:46273825-46273844 | Msa0602570:intron | 50.0% | |
GGGGATAACAGAGCAATACG+GGG | + | chr4_2:46273826-46273845 | Msa0602570:intron | 50.0% | |
GGGATAACAGAGCAATACGG+GGG | + | chr4_2:46273827-46273846 | Msa0602570:intron | 50.0% | |
GGATAACAGAGCAATACGGG+GGG | + | chr4_2:46273828-46273847 | Msa0602570:intron | 50.0% | |
CCACGTCCTTGATTGCTTGA+GGG | - | chr4_2:46273868-46273887 | None:intergenic | 50.0% | |
ACCACGTCCTTGATTGCTTG+AGG | - | chr4_2:46273869-46273888 | None:intergenic | 50.0% | |
CGGGAATAAGGGAAATCACG+GGG | + | chr4_2:46274574-46274593 | Msa0602570:intron | 50.0% | |
ACGGGGAGTTACTTCATTCC+CGG | + | chr4_2:46274591-46274610 | Msa0602570:intron | 50.0% | |
TCATGGGTACAAAGGTTCCC+GGG | - | chr4_2:46274612-46274631 | None:intergenic | 50.0% | |
GAAAAGGTTGACAGCAAGCC+AGG | - | chr4_2:46274757-46274776 | None:intergenic | 50.0% | |
ATCAGATGAGCTGAGACAGC+TGG | - | chr4_2:46275130-46275149 | None:intergenic | 50.0% | |
TCACAAGTTTCAGCTCCACC+AGG | + | chr4_2:46275187-46275206 | Msa0602570:CDS | 50.0% | |
TGCGAAGAAAATCCAGGAGG+TGG | - | chr4_2:46275235-46275254 | None:intergenic | 50.0% | |
!! | TTTCCAGCTGAGAGTGTCTG+AGG | - | chr4_2:46275414-46275433 | None:intergenic | 50.0% |
! | GCTGGAAATATTGGTGGCAC+AGG | + | chr4_2:46275426-46275445 | Msa0602570:CDS | 50.0% |
ACAACTGAGGATAAGGGGCT+AGG | - | chr4_2:46275716-46275735 | None:intergenic | 50.0% | |
GACTGCTGCATAGACAACTG+AGG | - | chr4_2:46275729-46275748 | None:intergenic | 50.0% | |
CAAATGGCCAATGGAATGGG+TGG | + | chr4_2:46275766-46275785 | Msa0602570:CDS | 50.0% | |
CCTCATTCCACCCATTCCAT+TGG | - | chr4_2:46275776-46275795 | None:intergenic | 50.0% | |
CCAATGGAATGGGTGGAATG+AGG | + | chr4_2:46275773-46275792 | Msa0602570:CDS | 50.0% | |
CCCCCATACTTCATACCACA+AGG | - | chr4_2:46276553-46276572 | None:intergenic | 50.0% | |
! | GAGAGAGAAAGCGCACCACA+GGG | - | chr4_2:46267923-46267942 | None:intergenic | 55.0% |
! | AGAGAGAGAAAGCGCACCAC+AGG | - | chr4_2:46267924-46267943 | None:intergenic | 55.0% |
!! | CAGGAGTGTTGGTGCTTCAG+AGG | - | chr4_2:46268776-46268795 | None:intergenic | 55.0% |
GCACCAACACTCCTGATCGA+AGG | + | chr4_2:46268781-46268800 | Msa0602570:intron | 55.0% | |
! | ACGCCTTCGATCAGGAGTGT+TGG | - | chr4_2:46268787-46268806 | None:intergenic | 55.0% |
! | CTCCTGATCGAAGGCGTGTT+CGG | + | chr4_2:46268790-46268809 | Msa0602570:intron | 55.0% |
CACTGCAGCAAGGAGTCAGA+TGG | - | chr4_2:46270104-46270123 | None:intergenic | 55.0% | |
GCTACTGTAGCACTGCAGCA+AGG | - | chr4_2:46270271-46270290 | None:intergenic | 55.0% | |
! | GGTTGATGCAAGGCTGGTCA+CGG | - | chr4_2:46270670-46270689 | None:intergenic | 55.0% |
AACAGTATGCAACGGCGGTC+AGG | + | chr4_2:46271132-46271151 | Msa0602570:CDS | 55.0% | |
ACAGTATGCAACGGCGGTCA+GGG | + | chr4_2:46271133-46271152 | Msa0602570:CDS | 55.0% | |
GTCCAATCATCTAGGGGAGG+AGG | - | chr4_2:46271168-46271187 | None:intergenic | 55.0% | |
ACAAGTTGTCAGCCCCCTGT+TGG | + | chr4_2:46271589-46271608 | Msa0602570:CDS | 55.0% | |
!! | TTTGGCTTGGACGGCACAGA+GGG | - | chr4_2:46271628-46271647 | None:intergenic | 55.0% |
!!! | TTTTGGCTTGGACGGCACAG+AGG | - | chr4_2:46271629-46271648 | None:intergenic | 55.0% |
TGCTGTTACGGGGACGATTC+AGG | + | chr4_2:46271732-46271751 | Msa0602570:CDS | 55.0% | |
AGACACTGCTTCCTCTGGAC+CGG | - | chr4_2:46272046-46272065 | None:intergenic | 55.0% | |
GTAGCAGACACTGCTTCCTC+TGG | - | chr4_2:46272051-46272070 | None:intergenic | 55.0% | |
GTGATGCTGGGTGTGATGCT+GGG | + | chr4_2:46272646-46272665 | Msa0602570:CDS | 55.0% | |
TGTGACTCTTAGGCTGGTGC+TGG | - | chr4_2:46272932-46272951 | None:intergenic | 55.0% | |
ACCCAGCAGACCCTATCTTC+TGG | - | chr4_2:46273804-46273823 | None:intergenic | 55.0% | |
AGAAGATAGGGTCTGCTGGG+TGG | + | chr4_2:46273803-46273822 | Msa0602570:intron | 55.0% | |
GAAGATAGGGTCTGCTGGGT+GGG | + | chr4_2:46273804-46273823 | Msa0602570:intron | 55.0% | |
AAGATAGGGTCTGCTGGGTG+GGG | + | chr4_2:46273805-46273824 | Msa0602570:intron | 55.0% | |
AACAGAGCAATACGGGGGGA+TGG | + | chr4_2:46273832-46273851 | Msa0602570:intron | 55.0% | |
GCTGCACCCTCAAGCAATCA+AGG | + | chr4_2:46273859-46273878 | Msa0602570:intron | 55.0% | |
CCCTCAAGCAATCAAGGACG+TGG | + | chr4_2:46273865-46273884 | Msa0602570:intron | 55.0% | |
!! | AAGGACGTGGTGTCGCAACT+AGG | + | chr4_2:46273878-46273897 | Msa0602570:intron | 55.0% |
!! | AGGACGTGGTGTCGCAACTA+GGG | + | chr4_2:46273879-46273898 | Msa0602570:intron | 55.0% |
CGGGGAGTTACTTCATTCCC+GGG | + | chr4_2:46274592-46274611 | Msa0602570:intron | 55.0% | |
TCACCTCAGACACTCTCAGC+TGG | + | chr4_2:46275408-46275427 | Msa0602570:CDS | 55.0% | |
GTTGGCAAGGGGAGACTTCA+AGG | + | chr4_2:46275483-46275502 | Msa0602570:CDS | 55.0% | |
AATGAGGCGCAGAGTGGGAA+TGG | + | chr4_2:46275789-46275808 | Msa0602570:CDS | 55.0% | |
! | TGGGTGTGGCCGAACTTTTG+AGG | + | chr4_2:46275814-46275833 | Msa0602570:CDS | 55.0% |
CACCGAACACGCCTTCGATC+AGG | - | chr4_2:46268795-46268814 | None:intergenic | 60.0% | |
TCAATGTCACGGACGGCAGC+TGG | + | chr4_2:46269754-46269773 | Msa0602570:CDS | 60.0% | |
! | CTCTTCCCACCAGTGCTGCT+TGG | + | chr4_2:46271470-46271489 | Msa0602570:CDS | 60.0% |
AGTTGTCAGCCCCCTGTTGG+AGG | + | chr4_2:46271592-46271611 | Msa0602570:CDS | 60.0% | |
GGTGATGCTGGGTGTGATGC+TGG | + | chr4_2:46272645-46272664 | Msa0602570:CDS | 60.0% | |
GCAAGCATGGCCGATCTCTC+TGG | - | chr4_2:46273479-46273498 | None:intergenic | 60.0% | |
AGATAGGGTCTGCTGGGTGG+GGG | + | chr4_2:46273806-46273825 | Msa0602570:intron | 60.0% | |
GGTGGAATGAGGCGCAGAGT+GGG | + | chr4_2:46275784-46275803 | Msa0602570:CDS | 60.0% | |
GCGCAGAGTGGGAATGGTCT+GGG | + | chr4_2:46275795-46275814 | Msa0602570:CDS | 60.0% | |
GAGTGGGAATGGTCTGGGTG+TGG | + | chr4_2:46275800-46275819 | Msa0602570:CDS | 60.0% | |
GATAGGGTCTGCTGGGTGGG+GGG | + | chr4_2:46273807-46273826 | Msa0602570:intron | 65.0% | |
CCAGGAGGTGGAAGCCTGCT+TGG | - | chr4_2:46275223-46275242 | None:intergenic | 65.0% | |
CCAAGCAGGCTTCCACCTCC+TGG | + | chr4_2:46275220-46275239 | Msa0602570:CDS | 65.0% | |
GGGTGGAATGAGGCGCAGAG+TGG | + | chr4_2:46275783-46275802 | Msa0602570:CDS | 65.0% | |
GGCGCAGAGTGGGAATGGTC+TGG | + | chr4_2:46275794-46275813 | Msa0602570:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 46267854 | 46276633 | 46267854 | ID=Msa0602570;Name=Msa0602570 |
chr4_2 | mRNA | 46267854 | 46276633 | 46267854 | ID=Msa0602570-mRNA-1;Parent=Msa0602570;Name=Msa0602570-mRNA-1;_AED=0.07;_eAED=0.07;_QI=214|1|0.92|1|0.83|0.69|13|663|1076 |
chr4_2 | exon | 46267854 | 46268049 | 46267854 | ID=Msa0602570-mRNA-1:exon:10436;Parent=Msa0602570-mRNA-1 |
chr4_2 | exon | 46268555 | 46268665 | 46268555 | ID=Msa0602570-mRNA-1:exon:10437;Parent=Msa0602570-mRNA-1 |
chr4_2 | exon | 46269097 | 46269224 | 46269097 | ID=Msa0602570-mRNA-1:exon:10438;Parent=Msa0602570-mRNA-1 |
chr4_2 | exon | 46269435 | 46269812 | 46269435 | ID=Msa0602570-mRNA-1:exon:10439;Parent=Msa0602570-mRNA-1 |
chr4_2 | exon | 46270366 | 46270449 | 46270366 | ID=Msa0602570-mRNA-1:exon:10440;Parent=Msa0602570-mRNA-1 |
chr4_2 | exon | 46270542 | 46270590 | 46270542 | ID=Msa0602570-mRNA-1:exon:10441;Parent=Msa0602570-mRNA-1 |
chr4_2 | exon | 46270677 | 46270768 | 46270677 | ID=Msa0602570-mRNA-1:exon:10442;Parent=Msa0602570-mRNA-1 |
chr4_2 | exon | 46271101 | 46271230 | 46271101 | ID=Msa0602570-mRNA-1:exon:10443;Parent=Msa0602570-mRNA-1 |
chr4_2 | exon | 46271412 | 46271491 | 46271412 | ID=Msa0602570-mRNA-1:exon:10444;Parent=Msa0602570-mRNA-1 |
chr4_2 | exon | 46271576 | 46273089 | 46271576 | ID=Msa0602570-mRNA-1:exon:10445;Parent=Msa0602570-mRNA-1 |
chr4_2 | exon | 46275176 | 46275289 | 46275176 | ID=Msa0602570-mRNA-1:exon:10446;Parent=Msa0602570-mRNA-1 |
chr4_2 | exon | 46275370 | 46276412 | 46275370 | ID=Msa0602570-mRNA-1:exon:10447;Parent=Msa0602570-mRNA-1 |
chr4_2 | exon | 46276445 | 46276633 | 46276445 | ID=Msa0602570-mRNA-1:exon:10448;Parent=Msa0602570-mRNA-1 |
chr4_2 | five_prime_UTR | 46267854 | 46268049 | 46267854 | ID=Msa0602570-mRNA-1:five_prime_utr;Parent=Msa0602570-mRNA-1 |
chr4_2 | five_prime_UTR | 46268555 | 46268572 | 46268555 | ID=Msa0602570-mRNA-1:five_prime_utr;Parent=Msa0602570-mRNA-1 |
chr4_2 | CDS | 46268573 | 46268665 | 46268573 | ID=Msa0602570-mRNA-1:cds;Parent=Msa0602570-mRNA-1 |
chr4_2 | CDS | 46269097 | 46269224 | 46269097 | ID=Msa0602570-mRNA-1:cds;Parent=Msa0602570-mRNA-1 |
chr4_2 | CDS | 46269435 | 46269812 | 46269435 | ID=Msa0602570-mRNA-1:cds;Parent=Msa0602570-mRNA-1 |
chr4_2 | CDS | 46270366 | 46270449 | 46270366 | ID=Msa0602570-mRNA-1:cds;Parent=Msa0602570-mRNA-1 |
chr4_2 | CDS | 46270542 | 46270590 | 46270542 | ID=Msa0602570-mRNA-1:cds;Parent=Msa0602570-mRNA-1 |
chr4_2 | CDS | 46270677 | 46270768 | 46270677 | ID=Msa0602570-mRNA-1:cds;Parent=Msa0602570-mRNA-1 |
chr4_2 | CDS | 46271101 | 46271230 | 46271101 | ID=Msa0602570-mRNA-1:cds;Parent=Msa0602570-mRNA-1 |
chr4_2 | CDS | 46271412 | 46271491 | 46271412 | ID=Msa0602570-mRNA-1:cds;Parent=Msa0602570-mRNA-1 |
chr4_2 | CDS | 46271576 | 46273089 | 46271576 | ID=Msa0602570-mRNA-1:cds;Parent=Msa0602570-mRNA-1 |
chr4_2 | CDS | 46275176 | 46275289 | 46275176 | ID=Msa0602570-mRNA-1:cds;Parent=Msa0602570-mRNA-1 |
chr4_2 | CDS | 46275370 | 46275938 | 46275370 | ID=Msa0602570-mRNA-1:cds;Parent=Msa0602570-mRNA-1 |
chr4_2 | three_prime_UTR | 46275939 | 46276412 | 46275939 | ID=Msa0602570-mRNA-1:three_prime_utr;Parent=Msa0602570-mRNA-1 |
chr4_2 | three_prime_UTR | 46276445 | 46276633 | 46276445 | ID=Msa0602570-mRNA-1:three_prime_utr;Parent=Msa0602570-mRNA-1 |
Gene Sequence |
Protein sequence |