Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0686940 | XP_003607198.1 | 96.920 | 552 | 2 | 1 | 1 | 552 | 1 | 537 | 0.0 | 1085 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0686940 | sp|Q9SKR2|SYT1_ARATH | 72.252 | 555 | 136 | 4 | 1 | 552 | 1 | 540 | 0.0 | 828 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0686940 | G7JNF4 | 96.920 | 552 | 2 | 1 | 1 | 552 | 1 | 537 | 0.0 | 1085 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0686940 | Msa0827510 | 0.997717 | 8.879180e-248 | -8.615850e-47 |
| Msa0686940 | Msa1339200 | 0.827744 | 1.320944e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0686940 | MtrunA17_Chr1g0156811 | 71.014 | 552 | 141 | 3 | 1 | 551 | 1 | 534 | 0.0 | 812 |
| Msa0686940 | MtrunA17_Chr4g0037111 | 95.714 | 350 | 0 | 1 | 1 | 350 | 1 | 335 | 0.0 | 674 |
| Msa0686940 | MtrunA17_Chr1g0199571 | 53.750 | 560 | 235 | 4 | 1 | 552 | 1 | 544 | 0.0 | 582 |
| Msa0686940 | MtrunA17_Chr4g0037121 | 98.980 | 196 | 2 | 0 | 357 | 552 | 1 | 196 | 2.46e-139 | 401 |
| Msa0686940 | MtrunA17_Chr4g0064531 | 30.444 | 496 | 306 | 11 | 85 | 549 | 70 | 557 | 2.52e-65 | 222 |
| Msa0686940 | MtrunA17_Chr7g0246311 | 31.116 | 421 | 253 | 12 | 1 | 410 | 1 | 395 | 2.11e-60 | 208 |
| Msa0686940 | MtrunA17_Chr8g0351231 | 30.254 | 433 | 264 | 12 | 1 | 421 | 1 | 407 | 9.59e-55 | 192 |
| Msa0686940 | MtrunA17_Chr4g0037181 | 82.883 | 111 | 14 | 1 | 357 | 467 | 1 | 106 | 3.80e-54 | 180 |
| Msa0686940 | MtrunA17_Chr4g0037181 | 62.712 | 59 | 8 | 2 | 84 | 142 | 105 | 149 | 1.45e-12 | 65.9 |
| Msa0686940 | MtrunA17_Chr3g0137471 | 27.103 | 535 | 303 | 15 | 86 | 549 | 64 | 582 | 1.19e-49 | 180 |
| Msa0686940 | MtrunA17_Chr7g0249671 | 70.000 | 80 | 21 | 3 | 471 | 548 | 2 | 80 | 1.78e-24 | 97.1 |
| Msa0686940 | MtrunA17_Chr2g0313621 | 25.175 | 286 | 184 | 10 | 86 | 347 | 76 | 355 | 1.31e-14 | 77.0 |
| Msa0686940 | MtrunA17_Chr6g0478401 | 44.944 | 89 | 44 | 3 | 270 | 358 | 13 | 96 | 1.30e-12 | 66.2 |
| Msa0686940 | MtrunA17_Chr3g0111361 | 41.573 | 89 | 47 | 3 | 270 | 358 | 1 | 84 | 2.06e-11 | 62.8 |
| Msa0686940 | MtrunA17_Chr2g0280981 | 40.000 | 85 | 46 | 3 | 274 | 358 | 4 | 83 | 7.15e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0686940 | AT2G20990.1 | 72.252 | 555 | 136 | 4 | 1 | 552 | 1 | 540 | 0.0 | 828 |
| Msa0686940 | AT1G20080.2 | 70.109 | 552 | 149 | 2 | 1 | 552 | 1 | 536 | 0.0 | 820 |
| Msa0686940 | AT1G20080.3 | 70.109 | 552 | 149 | 2 | 1 | 552 | 1 | 536 | 0.0 | 820 |
| Msa0686940 | AT1G20080.4 | 70.109 | 552 | 149 | 2 | 1 | 552 | 1 | 536 | 0.0 | 820 |
| Msa0686940 | AT1G20080.1 | 70.109 | 552 | 149 | 2 | 1 | 552 | 1 | 536 | 0.0 | 820 |
| Msa0686940 | AT1G20080.5 | 70.109 | 552 | 149 | 2 | 1 | 552 | 1 | 536 | 0.0 | 820 |
| Msa0686940 | AT2G20990.2 | 69.257 | 579 | 136 | 5 | 1 | 552 | 1 | 564 | 0.0 | 814 |
| Msa0686940 | AT2G20990.3 | 67.622 | 593 | 136 | 5 | 1 | 552 | 1 | 578 | 0.0 | 811 |
| Msa0686940 | AT5G04220.2 | 52.072 | 555 | 248 | 4 | 1 | 552 | 1 | 540 | 0.0 | 576 |
| Msa0686940 | AT5G04220.3 | 52.941 | 493 | 214 | 4 | 63 | 552 | 1 | 478 | 0.0 | 526 |
| Msa0686940 | AT2G21010.1 | 62.977 | 262 | 88 | 3 | 293 | 552 | 1 | 255 | 1.88e-114 | 340 |
| Msa0686940 | AT5G04220.1 | 51.266 | 316 | 151 | 3 | 240 | 552 | 3 | 318 | 8.61e-102 | 310 |
| Msa0686940 | AT1G05500.1 | 29.825 | 570 | 350 | 11 | 11 | 549 | 1 | 551 | 1.39e-71 | 239 |
| Msa0686940 | AT3G61050.2 | 30.093 | 432 | 265 | 11 | 1 | 421 | 1 | 406 | 2.88e-56 | 197 |
| Msa0686940 | AT3G61050.1 | 30.093 | 432 | 265 | 11 | 1 | 421 | 1 | 406 | 2.88e-56 | 197 |
| Msa0686940 | AT1G05500.2 | 29.736 | 417 | 255 | 8 | 161 | 549 | 1 | 407 | 1.72e-50 | 179 |
| Msa0686940 | AT2G21040.1 | 62.921 | 89 | 33 | 0 | 419 | 507 | 2 | 90 | 4.00e-34 | 130 |
| Msa0686940 | AT3G60950.1 | 28.859 | 298 | 164 | 11 | 86 | 381 | 39 | 290 | 2.00e-22 | 101 |
| Msa0686940 | AT3G61030.1 | 27.852 | 298 | 160 | 10 | 86 | 381 | 39 | 283 | 8.34e-20 | 93.2 |
| Msa0686940 | AT1G48590.4 | 43.820 | 89 | 45 | 3 | 270 | 358 | 6 | 89 | 1.24e-13 | 69.7 |
| Msa0686940 | AT1G48590.1 | 43.820 | 89 | 45 | 3 | 270 | 358 | 6 | 89 | 1.24e-13 | 69.7 |
| Msa0686940 | AT1G48590.2 | 43.820 | 89 | 45 | 3 | 270 | 358 | 37 | 120 | 1.72e-13 | 70.1 |
| Msa0686940 | AT1G53590.1 | 26.374 | 273 | 165 | 10 | 86 | 331 | 72 | 335 | 2.35e-13 | 73.6 |
| Msa0686940 | AT5G47710.1 | 42.708 | 96 | 50 | 3 | 270 | 365 | 1 | 91 | 3.10e-13 | 68.2 |
| Msa0686940 | AT5G47710.2 | 42.708 | 96 | 50 | 3 | 270 | 365 | 1 | 91 | 3.10e-13 | 68.2 |
| Msa0686940 | AT5G47710.3 | 42.708 | 96 | 50 | 3 | 270 | 365 | 1 | 91 | 3.10e-13 | 68.2 |
| Msa0686940 | AT5G47710.4 | 42.708 | 96 | 50 | 3 | 270 | 365 | 1 | 91 | 3.10e-13 | 68.2 |
| Msa0686940 | AT3G14590.2 | 25.484 | 310 | 192 | 12 | 86 | 366 | 72 | 371 | 4.61e-13 | 72.4 |
| Msa0686940 | AT3G14590.3 | 25.484 | 310 | 192 | 12 | 86 | 366 | 41 | 340 | 5.02e-13 | 72.4 |
| Msa0686940 | AT3G14590.1 | 25.484 | 310 | 192 | 12 | 86 | 366 | 27 | 326 | 5.26e-13 | 72.4 |
| Msa0686940 | AT3G61300.1 | 27.509 | 269 | 168 | 10 | 273 | 531 | 247 | 498 | 1.18e-12 | 71.2 |
| Msa0686940 | AT1G50260.1 | 23.513 | 353 | 234 | 14 | 85 | 410 | 191 | 534 | 3.93e-12 | 69.3 |
| Msa0686940 | AT1G70810.1 | 39.583 | 96 | 53 | 3 | 270 | 365 | 1 | 91 | 1.11e-11 | 63.9 |
| Msa0686940 | AT2G01540.1 | 38.636 | 88 | 49 | 3 | 271 | 358 | 3 | 85 | 1.58e-11 | 63.9 |
| Msa0686940 | AT3G17980.1 | 41.176 | 85 | 45 | 3 | 274 | 358 | 17 | 96 | 3.75e-11 | 62.8 |
| Msa0686940 | AT1G73580.1 | 36.429 | 140 | 69 | 6 | 270 | 403 | 4 | 129 | 7.16e-11 | 61.6 |
Find 167 sgRNAs with CRISPR-Local
Find 505 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCCATCTCCTCTTCATTTA+AGG | 0.082315 | 4_4:-51574747 | None:intergenic |
| TGGAATCTGCTCTTCAATTA+TGG | 0.144763 | 4_4:-51570699 | None:intergenic |
| TTATGGAGCCTTCTATAAAA+TGG | 0.186283 | 4_4:+51571298 | Msa0686940:CDS |
| ACCATTGCTGTTAAGGCATT+TGG | 0.186930 | 4_4:+51571339 | Msa0686940:CDS |
| TGTACTGAAGAAACCCATTT+TGG | 0.193252 | 4_4:-51569890 | None:intergenic |
| CACTTAGATCCATTCCAAAA+TGG | 0.203755 | 4_4:+51569876 | Msa0686940:exon |
| CCCATCTCCTCTTCATTTAA+GGG | 0.224515 | 4_4:-51574746 | None:intergenic |
| CCTCAACATCTTGAGCTTCA+TGG | 0.244110 | 4_4:-51574850 | None:intergenic |
| GTTAAAGAAGAAAGATCTTC+TGG | 0.245042 | 4_4:+51574306 | Msa0686940:CDS |
| CTAAAACGTTTAGGTTCTTC+AGG | 0.245789 | 4_4:-51574638 | None:intergenic |
| AGGGATGGGGATGGGGATGG+TGG | 0.257830 | 4_4:-51569738 | None:intergenic |
| ATGGAATGAAGAATTTAATT+TGG | 0.277673 | 4_4:+51574420 | Msa0686940:CDS |
| GGAATCTGCTCTTCAATTAT+GGG | 0.285493 | 4_4:-51570698 | None:intergenic |
| GACTTTGGGCTAAAGCTTCT+AGG | 0.286163 | 4_4:+51573090 | Msa0686940:CDS |
| CCATCCCCATCCCTAGATTT+AGG | 0.288816 | 4_4:+51569747 | Msa0686940:five_prime_UTR |
| TCCACCAGCTGGAGTGCCTT+CGG | 0.297237 | 4_4:-51574807 | None:intergenic |
| TTAAATTCTTCATTCCATTC+AGG | 0.303352 | 4_4:-51574415 | None:intergenic |
| CCATTGCTGTTAAGGCATTT+GGG | 0.308327 | 4_4:+51571340 | Msa0686940:CDS |
| AGCTGTAAAACCTGGGTCTC+TGG | 0.315296 | 4_4:-51574454 | None:intergenic |
| TATCTAATATTTGAACTTCC+AGG | 0.317043 | 4_4:-51574110 | None:intergenic |
| CTTTCCTTATTAGGAATCAC+TGG | 0.318237 | 4_4:+51576918 | Msa0686940:intron |
| CAATGTCACCATTGCTGTTA+AGG | 0.325081 | 4_4:+51571332 | Msa0686940:CDS |
| TCATCGTCTTGGTCCACTAT+TGG | 0.325815 | 4_4:-51570120 | None:intergenic |
| GGATGGGGATGGGGATGGTG+GGG | 0.334435 | 4_4:-51569736 | None:intergenic |
| TGCTTCCTGAGATTCCAAAT+TGG | 0.339865 | 4_4:+51570157 | Msa0686940:CDS |
| AATGGTGACATTGGGATTTC+CGG | 0.341259 | 4_4:-51571322 | None:intergenic |
| GAGGCTCCTCTGCTATAAAT+TGG | 0.349999 | 4_4:-51575905 | None:intergenic |
| CCACCAGCTGGAGTGCCTTC+GGG | 0.353731 | 4_4:-51574806 | None:intergenic |
| GGAGTGCCTTCGGGAGCTTT+AGG | 0.360023 | 4_4:-51574797 | None:intergenic |
| TCGCATTACATTGAAGCCTT+TGG | 0.361595 | 4_4:+51571497 | Msa0686940:CDS |
| TGATGAGAAGGAGTTGATTA+TGG | 0.372111 | 4_4:+51571281 | Msa0686940:CDS |
| AGGTCCAGACTAAAACGTTT+AGG | 0.372756 | 4_4:-51574647 | None:intergenic |
| TGGAACTCATCTTCCCATCT+TGG | 0.380983 | 4_4:-51575885 | None:intergenic |
| TTAATCCAATTTGGAATCTC+AGG | 0.390421 | 4_4:-51570162 | None:intergenic |
| TGGTGTCTACAGGATTGTTC+AGG | 0.391879 | 4_4:+51573134 | Msa0686940:CDS |
| ACTTAGATCCATTCCAAAAT+GGG | 0.392659 | 4_4:+51569877 | Msa0686940:exon |
| ATCAACAAACCTTGAAAAGT+TGG | 0.399135 | 4_4:-51570776 | None:intergenic |
| GCTGATCTTATGTCTATTCC+TGG | 0.399296 | 4_4:+51573114 | Msa0686940:CDS |
| TTTGGTGTTGGAATTTCAAT+TGG | 0.403525 | 4_4:+51569931 | Msa0686940:CDS |
| AGGTGTAACAGAAAATGATT+AGG | 0.403951 | 4_4:-51569788 | None:intergenic |
| TTAATGATGAATACTTTATG+AGG | 0.404880 | 4_4:+51569626 | Msa0686940:five_prime_UTR |
| ACTTTGGGCTAAAGCTTCTA+GGG | 0.405305 | 4_4:+51573091 | Msa0686940:CDS |
| GGGATGGGGATGGGGATGGT+GGG | 0.406758 | 4_4:-51569737 | None:intergenic |
| GGTGATGTTGTCCTAAATCT+AGG | 0.408735 | 4_4:-51569758 | None:intergenic |
| CTCCACATGTAGTTTATCAT+TGG | 0.409415 | 4_4:-51575931 | None:intergenic |
| GGAAGTTCAAATATTAGATA+TGG | 0.410316 | 4_4:+51574113 | Msa0686940:CDS |
| TAAATCTAGGGATGGGGATG+GGG | 0.411881 | 4_4:-51569745 | None:intergenic |
| CACGGGACCGAAACCCTTGC+TGG | 0.423799 | 4_4:-51577292 | None:intergenic |
| TGTCTATTCCTGGTGTCTAC+AGG | 0.425149 | 4_4:+51573124 | Msa0686940:CDS |
| CCAGGAGCTTATCAAAGATC+AGG | 0.425584 | 4_4:+51574059 | Msa0686940:intron |
| GTGCAGCCACATGTTGACTT+TGG | 0.426065 | 4_4:+51573075 | Msa0686940:intron |
| ATTTCAATTGGTCTCGTTGT+TGG | 0.427047 | 4_4:+51569943 | Msa0686940:CDS |
| CTAAATCTAGGGATGGGGAT+GGG | 0.432721 | 4_4:-51569746 | None:intergenic |
| GGTGTAACAGAAAATGATTA+GGG | 0.435050 | 4_4:-51569787 | None:intergenic |
| TCAACAAACCTTGAAAAGTT+GGG | 0.435324 | 4_4:-51570775 | None:intergenic |
| ATATATACCAGCAAGGGTTT+CGG | 0.438708 | 4_4:+51577285 | Msa0686940:three_prime_UTR |
| TTTGCAAAGTTTCATCGTCT+TGG | 0.441142 | 4_4:-51570131 | None:intergenic |
| TACAGCTCAATGTTTATGAC+TGG | 0.443325 | 4_4:+51574470 | Msa0686940:CDS |
| TATGTGGCCTTATCTTGATA+AGG | 0.443807 | 4_4:+51570527 | Msa0686940:CDS |
| TCCTAAAATTACGCCAATAG+TGG | 0.445532 | 4_4:+51570107 | Msa0686940:CDS |
| TGCAGCCACATGTTGACTTT+GGG | 0.447473 | 4_4:+51573076 | Msa0686940:intron |
| TTCTCCACTGCAACTCTACC+TGG | 0.452380 | 4_4:-51577029 | None:intergenic |
| TGGGTTGAAAGCAACCGTTC+AGG | 0.454217 | 4_4:+51571359 | Msa0686940:CDS |
| TTTACATGTAAAATTCCAAC+GGG | 0.457448 | 4_4:-51574265 | None:intergenic |
| GAGTTTCAGACGCTCACTCT+CGG | 0.463988 | 4_4:+51570743 | Msa0686940:CDS |
| TAATTTACCCTATCAAAGTC+AGG | 0.465817 | 4_4:-51570189 | None:intergenic |
| ACCCTTAAATGAAGAGGAGA+TGG | 0.469354 | 4_4:+51574745 | Msa0686940:CDS |
| CTTAACAGCAATGGTGACAT+TGG | 0.478386 | 4_4:-51571331 | None:intergenic |
| CTATGTCGCTCTCATGGAAA+AGG | 0.478673 | 4_4:+51571548 | Msa0686940:CDS |
| GATCTAAGTGATTTCAGATC+GGG | 0.481855 | 4_4:-51569863 | None:intergenic |
| TTAACAGCAATGGTGACATT+GGG | 0.483816 | 4_4:-51571330 | None:intergenic |
| GGTTGGGAAGCATGACAAGA+TGG | 0.484765 | 4_4:+51574583 | Msa0686940:intron |
| TATGGAGCCTTCTATAAAAT+GGG | 0.488425 | 4_4:+51571299 | Msa0686940:CDS |
| CATCTTATAGATTCTAAGAA+TGG | 0.489619 | 4_4:+51577000 | Msa0686940:CDS |
| AGTTTCAGACGCTCACTCTC+GGG | 0.489815 | 4_4:+51570744 | Msa0686940:CDS |
| TTGGCAAAGCAAGGAAAGCT+TGG | 0.490618 | 4_4:-51571522 | None:intergenic |
| CAACATACCTTATCAAGATA+AGG | 0.492149 | 4_4:-51570534 | None:intergenic |
| GGTTATGTCGACATCAATCT+CGG | 0.493324 | 4_4:+51576940 | Msa0686940:CDS |
| TTAAAGAAGAAAGATCTTCT+GGG | 0.496144 | 4_4:+51574307 | Msa0686940:CDS |
| GAATCAGAAGTACATATGTA+TGG | 0.496829 | 4_4:-51577078 | None:intergenic |
| TCTAGGGATGGGGATGGGGA+TGG | 0.496849 | 4_4:-51569741 | None:intergenic |
| GCTGTAAAACCTGGGTCTCT+GGG | 0.497195 | 4_4:-51574453 | None:intergenic |
| TAAAACGTTTAGGTTCTTCA+GGG | 0.505411 | 4_4:-51574637 | None:intergenic |
| ACAAGTTTATAGAACTTATG+TGG | 0.506312 | 4_4:+51570511 | Msa0686940:CDS |
| AAACATTGAGCTGTAAAACC+TGG | 0.513710 | 4_4:-51574462 | None:intergenic |
| AAAAGAACAGAGATCCAAGA+TGG | 0.515166 | 4_4:+51575871 | Msa0686940:CDS |
| GTAAGCTTTAGTTTCACGTA+AGG | 0.517833 | 4_4:-51574340 | None:intergenic |
| GGAGACTAAAATTTAAGAGA+TGG | 0.520852 | 4_4:-51577119 | None:intergenic |
| GTTGTCCTAAATCTAGGGAT+GGG | 0.521281 | 4_4:-51569752 | None:intergenic |
| ACAAGTTGACCTCCACCAGC+TGG | 0.524770 | 4_4:-51574818 | None:intergenic |
| CAACATCTATGTCGCTCTCA+TGG | 0.531738 | 4_4:+51571542 | Msa0686940:CDS |
| GAATGAATGAATGAAACGGC+TGG | 0.531874 | 4_4:-51569705 | None:intergenic |
| TTCTAAGAATGGTCGCATCC+AGG | 0.534118 | 4_4:+51577011 | Msa0686940:CDS |
| GCTCCCGAAGGCACTCCAGC+TGG | 0.535017 | 4_4:+51574803 | Msa0686940:CDS |
| GTTATGTCGACATCAATCTC+GGG | 0.535331 | 4_4:+51576941 | Msa0686940:CDS |
| CATGAGAGCGACATAGATGT+TGG | 0.539276 | 4_4:-51571541 | None:intergenic |
| CAAGGAAAGCTTGGAACCAA+AGG | 0.539777 | 4_4:-51571513 | None:intergenic |
| ACAAGAACTTAAATCCTGAA+TGG | 0.542041 | 4_4:+51574401 | Msa0686940:CDS |
| CCCGAAGGCACTCCAGCTGG+TGG | 0.542115 | 4_4:+51574806 | Msa0686940:CDS |
| CATGAAGCTCAAGATGTTGA+GGG | 0.543113 | 4_4:+51574851 | Msa0686940:CDS |
| CGAAGAAAGCAAAGTATCGA+TGG | 0.543706 | 4_4:-51569657 | None:intergenic |
| CCATGAAGCTCAAGATGTTG+AGG | 0.550519 | 4_4:+51574850 | Msa0686940:CDS |
| ACAGCTCAATGTTTATGACT+GGG | 0.553354 | 4_4:+51574471 | Msa0686940:CDS |
| ATTTGGATATATACCAGCAA+GGG | 0.555762 | 4_4:+51577279 | Msa0686940:three_prime_UTR |
| TGAAGAATGAATGAATGAAA+CGG | 0.557768 | 4_4:-51569709 | None:intergenic |
| CTTTCAACCTACAGATGTTG+AGG | 0.558020 | 4_4:+51569984 | Msa0686940:CDS |
| TGAGTTCCAATTTATAGCAG+AGG | 0.560485 | 4_4:+51575899 | Msa0686940:CDS |
| TTTCCTTATTAGGAATCACT+GGG | 0.560765 | 4_4:+51576919 | Msa0686940:intron |
| ACATAGATGTTGGCAAAGCA+AGG | 0.563378 | 4_4:-51571531 | None:intergenic |
| CAACAAACCTTGAAAAGTTG+GGG | 0.565270 | 4_4:-51570774 | None:intergenic |
| GAAGGCACTCCAGCTGGTGG+AGG | 0.565743 | 4_4:+51574809 | Msa0686940:CDS |
| CTTTACATGTAAAATTCCAA+CGG | 0.567784 | 4_4:-51574266 | None:intergenic |
| TCATATCATAGTAGTAGTAA+TGG | 0.569787 | 4_4:+51569825 | Msa0686940:five_prime_UTR |
| TACCAATGATAAACTACATG+TGG | 0.571745 | 4_4:+51575929 | Msa0686940:CDS |
| CTGAAAATAAGACGTGCTTG+TGG | 0.573459 | 4_4:-51574890 | None:intergenic |
| TTATAAACCCTTAAATGAAG+AGG | 0.574026 | 4_4:+51574739 | Msa0686940:CDS |
| CCCAAATGCCTTAACAGCAA+TGG | 0.574272 | 4_4:-51571340 | None:intergenic |
| GAGCCTTCTATAAAATGGGC+CGG | 0.574886 | 4_4:+51571303 | Msa0686940:CDS |
| CAGCAAGGGTTTCGGTCCCG+TGG | 0.575434 | 4_4:+51577293 | Msa0686940:three_prime_UTR |
| CCCTTAAATGAAGAGGAGAT+GGG | 0.578046 | 4_4:+51574746 | Msa0686940:CDS |
| TTGTCCTAAATCTAGGGATG+GGG | 0.580024 | 4_4:-51569751 | None:intergenic |
| GGATCTAAGTGATTTCAGAT+CGG | 0.580195 | 4_4:-51569864 | None:intergenic |
| CAATGTTTATGACTGGGAGC+AGG | 0.580843 | 4_4:+51574477 | Msa0686940:CDS |
| ACGAACCTTGCTTCATCAGA+AGG | 0.580909 | 4_4:+51575971 | Msa0686940:CDS |
| ATGATTACCTCAACATCTGT+AGG | 0.580981 | 4_4:-51569991 | None:intergenic |
| CATTCTTAGAATCTATAAGA+TGG | 0.583722 | 4_4:-51576999 | None:intergenic |
| TTGGGAATCTTAGAGCTATG+AGG | 0.585506 | 4_4:+51574239 | Msa0686940:intron |
| CTTTGGGCTAAAGCTTCTAG+GGG | 0.586412 | 4_4:+51573092 | Msa0686940:CDS |
| GTTGGGAAGCATGACAAGAT+GGG | 0.586514 | 4_4:+51574584 | Msa0686940:CDS |
| TGTTGTCCTAAATCTAGGGA+TGG | 0.587303 | 4_4:-51569753 | None:intergenic |
| GTGTAACGAAAACAGTGAGA+AGG | 0.589516 | 4_4:+51577147 | Msa0686940:three_prime_UTR |
| AAGTACCTTCTGATGAAGCA+AGG | 0.591243 | 4_4:-51575976 | None:intergenic |
| AACATTGAGCTGTAAAACCT+GGG | 0.596132 | 4_4:-51574461 | None:intergenic |
| TGTAACGAAAACAGTGAGAA+GGG | 0.597167 | 4_4:+51577148 | Msa0686940:three_prime_UTR |
| AAATGAAGAGGAGATGGGCA+AGG | 0.600205 | 4_4:+51574751 | Msa0686940:CDS |
| AGTCAAAGACCCAGAGACCC+AGG | 0.601172 | 4_4:+51574444 | Msa0686940:CDS |
| TAGAACAGAATATTTATCCA+CGG | 0.604446 | 4_4:-51577310 | None:intergenic |
| AGAACAGAATATTTATCCAC+GGG | 0.606822 | 4_4:-51577309 | None:intergenic |
| AATGAAGAGGAGATGGGCAA+GGG | 0.610144 | 4_4:+51574752 | Msa0686940:CDS |
| ACATGTAGTTTATCATTGGT+AGG | 0.611492 | 4_4:-51575927 | None:intergenic |
| CCTAAATCTAGGGATGGGGA+TGG | 0.612581 | 4_4:-51569747 | None:intergenic |
| CAACAAAGTTGTTACCTGAA+CGG | 0.614430 | 4_4:-51571373 | None:intergenic |
| TGTAGTTTATCATTGGTAGG+AGG | 0.614487 | 4_4:-51575924 | None:intergenic |
| GATTTGGATATATACCAGCA+AGG | 0.615454 | 4_4:+51577278 | Msa0686940:three_prime_UTR |
| CAATGATAAACTACATGTGG+AGG | 0.618426 | 4_4:+51575932 | Msa0686940:CDS |
| AAAACGTTTAGGTTCTTCAG+GGG | 0.621049 | 4_4:-51574636 | None:intergenic |
| GCATCCAGGTAGAGTTGCAG+TGG | 0.621739 | 4_4:+51577025 | Msa0686940:CDS |
| AGTTTATGTGACTGATGAGA+AGG | 0.622742 | 4_4:+51571269 | Msa0686940:CDS |
| GTGATGTTGTCCTAAATCTA+GGG | 0.623219 | 4_4:-51569757 | None:intergenic |
| AAAGAACAGAGATCCAAGAT+GGG | 0.625196 | 4_4:+51575872 | Msa0686940:CDS |
| ATCGCGAGGACAGATTGTTG+TGG | 0.631945 | 4_4:+51574709 | Msa0686940:CDS |
| AGAGCTATGAGGAGACCCGT+TGG | 0.633398 | 4_4:+51574250 | Msa0686940:intron |
| ATATGATACGACGAAGGTGA+AGG | 0.636471 | 4_4:-51569808 | None:intergenic |
| CTGATGAAGCAAGGTTCGTG+AGG | 0.636887 | 4_4:-51575967 | None:intergenic |
| TGTAACAGAAAATGATTAGG+GGG | 0.642075 | 4_4:-51569785 | None:intergenic |
| AGGTTGCAAACATGTATCTG+TGG | 0.648677 | 4_4:+51574079 | Msa0686940:CDS |
| AAAGGCTTCAATGTAATGCG+AGG | 0.652346 | 4_4:-51571495 | None:intergenic |
| GGAGAACTGCATAAGCATGA+TGG | 0.658709 | 4_4:+51577046 | Msa0686940:exon |
| TGAACAATCCTGTAGACACC+AGG | 0.661769 | 4_4:-51573132 | None:intergenic |
| ATGAAGCTCAAGATGTTGAG+GGG | 0.672133 | 4_4:+51574852 | Msa0686940:CDS |
| TTTAGCCCAAAGTCAACATG+TGG | 0.676209 | 4_4:-51573081 | None:intergenic |
| TTATGTCGACATCAATCTCG+GGG | 0.683350 | 4_4:+51576942 | Msa0686940:CDS |
| GCTCAAAATGAGAAATCGCG+AGG | 0.690879 | 4_4:+51574695 | Msa0686940:CDS |
| GTGTAACAGAAAATGATTAG+GGG | 0.694947 | 4_4:-51569786 | None:intergenic |
| AACAAACCTTGAAAAGTTGG+GGG | 0.698689 | 4_4:-51570773 | None:intergenic |
| ACAATTCCTAAAGCTCCCGA+AGG | 0.699450 | 4_4:+51574791 | Msa0686940:CDS |
| ACTATGATATGATACGACGA+AGG | 0.741345 | 4_4:-51569814 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTCTAAATTAATATTC+AGG | + | chr4_4:51574152-51574171 | Msa0686940:intron | 10.0% |
| !!! | ACAGAATCAATTTTATATTT+TGG | - | chr4_4:51570722-51570741 | None:intergenic | 15.0% |
| !!! | AGTTTGTTCAAATTATAAAT+GGG | - | chr4_4:51571004-51571023 | None:intergenic | 15.0% |
| !!! | AAGTTTGTTCAAATTATAAA+TGG | - | chr4_4:51571005-51571024 | None:intergenic | 15.0% |
| !!! | ATTAAGCAATTTTTATAAGA+AGG | - | chr4_4:51572127-51572146 | None:intergenic | 15.0% |
| !! | TGTTAAACTATTAATAAGAA+AGG | - | chr4_4:51572502-51572521 | None:intergenic | 15.0% |
| !!! | AAAATTTGTTTTAACTTTAC+TGG | + | chr4_4:51572577-51572596 | Msa0686940:intron | 15.0% |
| !!! | TTATTTTGAATGTGTAATAA+AGG | + | chr4_4:51573001-51573020 | Msa0686940:intron | 15.0% |
| !! | AATTAATATTCAGGATATAA+TGG | + | chr4_4:51574161-51574180 | Msa0686940:intron | 15.0% |
| !! | GAATACTATAAGTTAAAATA+AGG | + | chr4_4:51576589-51576608 | Msa0686940:intron | 15.0% |
| !!! | ATAAGTTAAAATAAGGATTT+TGG | + | chr4_4:51576596-51576615 | Msa0686940:intron | 15.0% |
| !!! | AGAATATATTTGTTTTGATT+TGG | + | chr4_4:51577262-51577281 | Msa0686940:three_prime_UTR | 15.0% |
| !!! | CTTATTCACATTTTTTTTTT+AGG | + | chr4_4:51577333-51577352 | Msa0686940:three_prime_UTR | 15.0% |
| !! | TTAATGATGAATACTTTATG+AGG | + | chr4_4:51569626-51569645 | Msa0686940:five_prime_UTR | 20.0% |
| !!! | AGTACAATTTTTGGTTTTTT+CGG | + | chr4_4:51569907-51569926 | Msa0686940:CDS | 20.0% |
| !!! | GAGTTTTTTGTTTTTGATTT+TGG | + | chr4_4:51570077-51570096 | Msa0686940:intron | 20.0% |
| !!! | TATGGTACATTTCTATTTTT+AGG | + | chr4_4:51570410-51570429 | Msa0686940:intron | 20.0% |
| !!! | TATTTTTAGGTTTTGAGTTT+TGG | + | chr4_4:51570423-51570442 | Msa0686940:intron | 20.0% |
| !!! | TGAAATATTGTTTTTGTTTG+TGG | + | chr4_4:51570464-51570483 | Msa0686940:CDS | 20.0% |
| !!! | TGTTTTTTGTTTTGATGTTT+AGG | + | chr4_4:51570643-51570662 | Msa0686940:intron | 20.0% |
| !! | AACAAAAAATACCAAAAAGA+GGG | - | chr4_4:51571057-51571076 | None:intergenic | 20.0% |
| !! | TAACAAAAAATACCAAAAAG+AGG | - | chr4_4:51571058-51571077 | None:intergenic | 20.0% |
| !! | ATATGTTATCAAGACAAAAA+TGG | - | chr4_4:51571195-51571214 | None:intergenic | 20.0% |
| !! | CTAAAATATATGTAATTTCC+AGG | + | chr4_4:51571446-51571465 | Msa0686940:intron | 20.0% |
| !!! | TTTTTACCTTTTAGGAATTA+AGG | + | chr4_4:51572254-51572273 | Msa0686940:intron | 20.0% |
| !!! | TGCGTTTTTGTTTTTTATTT+TGG | + | chr4_4:51572809-51572828 | Msa0686940:intron | 20.0% |
| !!! | GCGTTTTTGTTTTTTATTTT+GGG | + | chr4_4:51572810-51572829 | Msa0686940:intron | 20.0% |
| !! | CAAGTAGCAAATTATAAAAA+GGG | - | chr4_4:51572978-51572997 | None:intergenic | 20.0% |
| !! | TCAAGTAGCAAATTATAAAA+AGG | - | chr4_4:51572979-51572998 | None:intergenic | 20.0% |
| !! | GAAGAGTAATATATGTTTAA+TGG | - | chr4_4:51573950-51573969 | None:intergenic | 20.0% |
| !!! | CACACTTTAAATTAGTTTAA+TGG | - | chr4_4:51574036-51574055 | None:intergenic | 20.0% |
| !!! | TTTTTCTTGTGAATGTTATT+GGG | + | chr4_4:51574221-51574240 | Msa0686940:intron | 20.0% |
| !! | ATGGAATGAAGAATTTAATT+TGG | + | chr4_4:51574420-51574439 | Msa0686940:CDS | 20.0% |
| !! | CTTTAATAAGGAGAATAAAT+TGG | + | chr4_4:51575511-51575530 | Msa0686940:intron | 20.0% |
| !!! | TAACATAGTTTTGATTCATA+TGG | + | chr4_4:51575640-51575659 | Msa0686940:intron | 20.0% |
| !!! | TATTCTTGTTCTTTTAACTT+TGG | + | chr4_4:51576196-51576215 | Msa0686940:intron | 20.0% |
| !!! | ATTCTTGTTCTTTTAACTTT+GGG | + | chr4_4:51576197-51576216 | Msa0686940:intron | 20.0% |
| !! | ATGCTATATATTTAACACAT+AGG | + | chr4_4:51576367-51576386 | Msa0686940:intron | 20.0% |
| !! | TGCTATATATTTAACACATA+GGG | + | chr4_4:51576368-51576387 | Msa0686940:intron | 20.0% |
| !!! | ACATATTTACTTTCTAAAGA+AGG | - | chr4_4:51576473-51576492 | None:intergenic | 20.0% |
| !!! | ATTAAGACGGAATTTTAAAT+TGG | - | chr4_4:51576509-51576528 | None:intergenic | 20.0% |
| !! | GAGTTCAAAATCATATATTA+AGG | - | chr4_4:51576554-51576573 | None:intergenic | 20.0% |
| !!! | TTTTAACTTATAGTATTCCT+TGG | - | chr4_4:51576587-51576606 | None:intergenic | 20.0% |
| !!! | GATATAAAAGGAACTTTTTA+AGG | - | chr4_4:51576775-51576794 | None:intergenic | 20.0% |
| ! | TGAAGAATGAATGAATGAAA+CGG | - | chr4_4:51569712-51569731 | None:intergenic | 25.0% |
| ! | TCATATCATAGTAGTAGTAA+TGG | + | chr4_4:51569825-51569844 | Msa0686940:five_prime_UTR | 25.0% |
| !!! | ATTTTTGGTTTTTTCGGATT+TGG | + | chr4_4:51569913-51569932 | Msa0686940:CDS | 25.0% |
| !!! | TTTGTTTTTGATTTTGGAAC+AGG | + | chr4_4:51570083-51570102 | Msa0686940:intron | 25.0% |
| !! | TCAGGATTTTTAATCCAATT+TGG | - | chr4_4:51570174-51570193 | None:intergenic | 25.0% |
| ! | TTAAAAATCCTGACTTTGAT+AGG | + | chr4_4:51570181-51570200 | Msa0686940:CDS | 25.0% |
| ! | TAAAAATCCTGACTTTGATA+GGG | + | chr4_4:51570182-51570201 | Msa0686940:CDS | 25.0% |
| !! | TTATTTTCTCAAACTATCTC+CGG | - | chr4_4:51570298-51570317 | None:intergenic | 25.0% |
| ! | ACAAGTTTATAGAACTTATG+TGG | + | chr4_4:51570511-51570530 | Msa0686940:CDS | 25.0% |
| ! | ACTTATTTCACTGTTTGTAA+AGG | + | chr4_4:51570885-51570904 | Msa0686940:intron | 25.0% |
| ! | CTTATTTCACTGTTTGTAAA+GGG | + | chr4_4:51570886-51570905 | Msa0686940:intron | 25.0% |
| ! | TTGTGTATAAAATAGCAAAG+CGG | - | chr4_4:51571169-51571188 | None:intergenic | 25.0% |
| !!! | ACAAAGGAATATTTTCTAGT+TGG | + | chr4_4:51571736-51571755 | Msa0686940:intron | 25.0% |
| !!! | ACAAAGGAATATTTTCTAGT+TGG | + | chr4_4:51571736-51571755 | Msa0686940:intron | 25.0% |
| !! | ATTTTCTATCATCCAATAAG+TGG | - | chr4_4:51572021-51572040 | None:intergenic | 25.0% |
| ! | ATTTCAGTCTTGAATCTTTA+TGG | + | chr4_4:51572039-51572058 | Msa0686940:intron | 25.0% |
| ! | TATAAATTTCAAGACCTCAT+GGG | - | chr4_4:51572207-51572226 | None:intergenic | 25.0% |
| ! | TTATAAATTTCAAGACCTCA+TGG | - | chr4_4:51572208-51572227 | None:intergenic | 25.0% |
| ! | ATGAGGTCTTGAAATTTATA+AGG | + | chr4_4:51572207-51572226 | Msa0686940:intron | 25.0% |
| !!! | AGTAGTTGTTTTTACCTTTT+AGG | + | chr4_4:51572246-51572265 | Msa0686940:intron | 25.0% |
| ! | GTTTAACAACCTAAAATACA+AGG | + | chr4_4:51572514-51572533 | Msa0686940:intron | 25.0% |
| ! | ATTTCCAAAAATACACACAA+TGG | - | chr4_4:51572640-51572659 | None:intergenic | 25.0% |
| !!! | ATTTTAACTTGCTCATAAGA+AGG | - | chr4_4:51572765-51572784 | None:intergenic | 25.0% |
| ! | AACAAAAACGCAACAAAATT+AGG | - | chr4_4:51572801-51572820 | None:intergenic | 25.0% |
| !!! | TTGTTTTTTATTTTGGGCAT+AGG | + | chr4_4:51572816-51572835 | Msa0686940:intron | 25.0% |
| ! | GAAGAACAGGAAAATTAAAA+TGG | + | chr4_4:51573404-51573423 | Msa0686940:intron | 25.0% |
| ! | GTTACTTAATAGTTCATTGA+AGG | + | chr4_4:51573629-51573648 | Msa0686940:intron | 25.0% |
| !! | GATGATTTGAAAGATTTTGA+TGG | + | chr4_4:51573819-51573838 | Msa0686940:intron | 25.0% |
| !!! | CTCTCATACATTTTTTTTTG+AGG | + | chr4_4:51573861-51573880 | Msa0686940:intron | 25.0% |
| ! | TATCTAATATTTGAACTTCC+AGG | - | chr4_4:51574113-51574132 | None:intergenic | 25.0% |
| ! | GGAAGTTCAAATATTAGATA+TGG | + | chr4_4:51574113-51574132 | Msa0686940:CDS | 25.0% |
| ! | ATATTCAGGATATAATGGTA+TGG | + | chr4_4:51574166-51574185 | Msa0686940:intron | 25.0% |
| !! | CTTTTTCTTGTGAATGTTAT+TGG | + | chr4_4:51574220-51574239 | Msa0686940:intron | 25.0% |
| ! | TTTACATGTAAAATTCCAAC+GGG | - | chr4_4:51574268-51574287 | None:intergenic | 25.0% |
| ! | CTTTACATGTAAAATTCCAA+CGG | - | chr4_4:51574269-51574288 | None:intergenic | 25.0% |
| ! | TTAAAGAAGAAAGATCTTCT+GGG | + | chr4_4:51574307-51574326 | Msa0686940:CDS | 25.0% |
| !!! | TTTACAGTAGTCTTTTTTGA+TGG | - | chr4_4:51574379-51574398 | None:intergenic | 25.0% |
| ! | TTAAATTCTTCATTCCATTC+AGG | - | chr4_4:51574418-51574437 | None:intergenic | 25.0% |
| ! | TTATAAACCCTTAAATGAAG+AGG | + | chr4_4:51574739-51574758 | Msa0686940:CDS | 25.0% |
| !! | TAATATACCTCATTAGTTTC+TGG | + | chr4_4:51575069-51575088 | Msa0686940:intron | 25.0% |
| ! | GCTGTATGTAATAAAATGTT+TGG | + | chr4_4:51575312-51575331 | Msa0686940:intron | 25.0% |
| ! | TATCTCACTTTAGATGATTT+AGG | + | chr4_4:51575463-51575482 | Msa0686940:intron | 25.0% |
| ! | AAGAAGGATTTGGATTTAAA+TGG | + | chr4_4:51575587-51575606 | Msa0686940:intron | 25.0% |
| !!! | ATTGAAATCTGTTTTTTGTG+TGG | + | chr4_4:51575810-51575829 | Msa0686940:intron | 25.0% |
| !! | AATAGGTTTTACTTTCTGAA+TGG | - | chr4_4:51576044-51576063 | None:intergenic | 25.0% |
| !!! | TCTAACTTTTTTCAACAATG+AGG | - | chr4_4:51576110-51576129 | None:intergenic | 25.0% |
| !!! | AAAAAAGTTAGAAGTACTAG+TGG | + | chr4_4:51576118-51576137 | Msa0686940:intron | 25.0% |
| ! | TCTTGAGCTTCTATTAATAT+GGG | - | chr4_4:51576332-51576351 | None:intergenic | 25.0% |
| ! | ATCTTGAGCTTCTATTAATA+TGG | - | chr4_4:51576333-51576352 | None:intergenic | 25.0% |
| !! | ATTTACTTTCTAAAGAAGGA+TGG | - | chr4_4:51576469-51576488 | None:intergenic | 25.0% |
| ! | ATCTTAATAGAGGATTAAGA+CGG | - | chr4_4:51576522-51576541 | None:intergenic | 25.0% |
| ! | GATAGTATGAATCTTAATAG+AGG | - | chr4_4:51576532-51576551 | None:intergenic | 25.0% |
| ! | TTGTTTCAATGCTGATAAAT+TGG | + | chr4_4:51576622-51576641 | Msa0686940:intron | 25.0% |
| ! | TGTTTCAATGCTGATAAATT+GGG | + | chr4_4:51576623-51576642 | Msa0686940:intron | 25.0% |
| ! | AGAGAAAAAGTTATACTGAA+AGG | + | chr4_4:51576728-51576747 | Msa0686940:intron | 25.0% |
| ! | CATTCTTAGAATCTATAAGA+TGG | - | chr4_4:51577002-51577021 | None:intergenic | 25.0% |
| !! | CATCTTATAGATTCTAAGAA+TGG | + | chr4_4:51577000-51577019 | Msa0686940:CDS | 25.0% |
| !!! | AAATTTAAGAGATGGTTTTG+CGG | - | chr4_4:51577114-51577133 | None:intergenic | 25.0% |
| ! | ATGCCTGTGATAAAAAAAAA+AGG | + | chr4_4:51577222-51577241 | Msa0686940:three_prime_UTR | 25.0% |
| !!! | AGACCTTTTTTTTTTATCAC+AGG | - | chr4_4:51577228-51577247 | None:intergenic | 25.0% |
| ! | TAGAACAGAATATTTATCCA+CGG | - | chr4_4:51577313-51577332 | None:intergenic | 25.0% |
| TGTAACAGAAAATGATTAGG+GGG | - | chr4_4:51569788-51569807 | None:intergenic | 30.0% | |
| GTGTAACAGAAAATGATTAG+GGG | - | chr4_4:51569789-51569808 | None:intergenic | 30.0% | |
| GGTGTAACAGAAAATGATTA+GGG | - | chr4_4:51569790-51569809 | None:intergenic | 30.0% | |
| AGGTGTAACAGAAAATGATT+AGG | - | chr4_4:51569791-51569810 | None:intergenic | 30.0% | |
| ACTTAGATCCATTCCAAAAT+GGG | + | chr4_4:51569877-51569896 | Msa0686940:exon | 30.0% | |
| ! | GGTTTCTTCAGTACAATTTT+TGG | + | chr4_4:51569898-51569917 | Msa0686940:CDS | 30.0% |
| !! | TTTGGTGTTGGAATTTCAAT+TGG | + | chr4_4:51569931-51569950 | Msa0686940:CDS | 30.0% |
| ! | TTAATCCAATTTGGAATCTC+AGG | - | chr4_4:51570165-51570184 | None:intergenic | 30.0% |
| TAATTTACCCTATCAAAGTC+AGG | - | chr4_4:51570192-51570211 | None:intergenic | 30.0% | |
| CATAGAGTAGTATACAACTA+TGG | + | chr4_4:51570392-51570411 | Msa0686940:intron | 30.0% | |
| ! | TTTGTTTGTGGTTTTTGTCA+AGG | + | chr4_4:51570476-51570495 | Msa0686940:CDS | 30.0% |
| CAACATACCTTATCAAGATA+AGG | - | chr4_4:51570537-51570556 | None:intergenic | 30.0% | |
| TCAACAAACCTTGAAAAGTT+GGG | - | chr4_4:51570778-51570797 | None:intergenic | 30.0% | |
| ATCAACAAACCTTGAAAAGT+TGG | - | chr4_4:51570779-51570798 | None:intergenic | 30.0% | |
| TTTCAAACCTCGATATTAAG+AGG | - | chr4_4:51570937-51570956 | None:intergenic | 30.0% | |
| ATACTTTCTGTCATATTCAC+AGG | + | chr4_4:51571240-51571259 | Msa0686940:intron | 30.0% | |
| TTATGGAGCCTTCTATAAAA+TGG | + | chr4_4:51571298-51571317 | Msa0686940:CDS | 30.0% | |
| TATGGAGCCTTCTATAAAAT+GGG | + | chr4_4:51571299-51571318 | Msa0686940:CDS | 30.0% | |
| TATATGTAATTTCCAGGTTG+TGG | + | chr4_4:51571452-51571471 | Msa0686940:intron | 30.0% | |
| !!! | TTTTTTGTGTATGTGTGTAG+GGG | - | chr4_4:51571598-51571617 | None:intergenic | 30.0% |
| !!! | CTTTTTTGTGTATGTGTGTA+GGG | - | chr4_4:51571599-51571618 | None:intergenic | 30.0% |
| !! | AGTTGATAGTGTTATGATCA+TGG | + | chr4_4:51571671-51571690 | Msa0686940:intron | 30.0% |
| !!! | TTTTTTGTGTATGTGTGTAG+GGG | - | chr4_4:51571598-51571617 | None:intergenic | 30.0% |
| !!! | CTTTTTTGTGTATGTGTGTA+GGG | - | chr4_4:51571599-51571618 | None:intergenic | 30.0% |
| ! | CTTGTACTACTATTTCAAGT+GGG | - | chr4_4:51571876-51571895 | None:intergenic | 30.0% |
| TCTTGTACTACTATTTCAAG+TGG | - | chr4_4:51571877-51571896 | None:intergenic | 30.0% | |
| !! | AGTTGATAGTGTTATGATCA+TGG | + | chr4_4:51571671-51571690 | Msa0686940:intron | 30.0% |
| ! | TGTTGATAGAAACCACTTAT+TGG | + | chr4_4:51572006-51572025 | Msa0686940:intron | 30.0% |
| TATAGAGATGTCAGAATGAA+AGG | - | chr4_4:51572084-51572103 | None:intergenic | 30.0% | |
| TATATACAGATACACAATGC+AGG | + | chr4_4:51572100-51572119 | Msa0686940:intron | 30.0% | |
| ATATACAGATACACAATGCA+GGG | + | chr4_4:51572101-51572120 | Msa0686940:intron | 30.0% | |
| AATATTTGTGCAGCAAAACA+AGG | - | chr4_4:51572167-51572186 | None:intergenic | 30.0% | |
| !!! | AGATGAGTATTTTTAGTGCA+AGG | - | chr4_4:51572344-51572363 | None:intergenic | 30.0% |
| ! | AATGTTTTCACAAAGCGAAT+GGG | - | chr4_4:51572541-51572560 | None:intergenic | 30.0% |
| ! | AAATGTTTTCACAAAGCGAA+TGG | - | chr4_4:51572542-51572561 | None:intergenic | 30.0% |
| ! | TGAACCATTGTGTGTATTTT+TGG | + | chr4_4:51572633-51572652 | Msa0686940:intron | 30.0% |
| ATATTGCCTACGAAAATCAA+TGG | - | chr4_4:51573359-51573378 | None:intergenic | 30.0% | |
| !! | ATGCATTGGTTCTATTTCTT+TGG | - | chr4_4:51573515-51573534 | None:intergenic | 30.0% |
| ! | ATTGAAGGTATAGTTGTATG+TGG | + | chr4_4:51573644-51573663 | Msa0686940:intron | 30.0% |
| ! | TTGAAGGTATAGTTGTATGT+GGG | + | chr4_4:51573645-51573664 | Msa0686940:intron | 30.0% |
| AAGCGAAAACAGAAAATTGA+TGG | + | chr4_4:51573902-51573921 | Msa0686940:intron | 30.0% | |
| TCAATGTACTTAGATAGTCT+TGG | + | chr4_4:51573991-51574010 | Msa0686940:intron | 30.0% | |
| !!! | AGATAGTCTTGGTTTTATTC+AGG | + | chr4_4:51574002-51574021 | Msa0686940:intron | 30.0% |
| ! | CTAATTTAAAGTGTGTTTCC+AGG | + | chr4_4:51574041-51574060 | Msa0686940:intron | 30.0% |
| ! | ATTTGAACTTCCAGGTTTTT+GGG | - | chr4_4:51574105-51574124 | None:intergenic | 30.0% |
| ! | TATTTGAACTTCCAGGTTTT+TGG | - | chr4_4:51574106-51574125 | None:intergenic | 30.0% |
| ! | CGTTGGAATTTTACATGTAA+AGG | + | chr4_4:51574267-51574286 | Msa0686940:CDS | 30.0% |
| GTTAAAGAAGAAAGATCTTC+TGG | + | chr4_4:51574306-51574325 | Msa0686940:CDS | 30.0% | |
| ACAAGAACTTAAATCCTGAA+TGG | + | chr4_4:51574401-51574420 | Msa0686940:CDS | 30.0% | |
| AATAAAACTTTCAGCTCAAG+AGG | - | chr4_4:51574507-51574526 | None:intergenic | 30.0% | |
| ! | TTATAGTTTCGAGTGATATC+TGG | + | chr4_4:51574528-51574547 | Msa0686940:intron | 30.0% |
| ! | TAAAACGTTTAGGTTCTTCA+GGG | - | chr4_4:51574640-51574659 | None:intergenic | 30.0% |
| ! | TTCTCATTTTGAGCATCATT+GGG | - | chr4_4:51574689-51574708 | None:intergenic | 30.0% |
| ! | TTTCTCATTTTGAGCATCAT+TGG | - | chr4_4:51574690-51574709 | None:intergenic | 30.0% |
| ATAGAATGCAAGTACTTCTT+AGG | - | chr4_4:51574947-51574966 | None:intergenic | 30.0% | |
| !! | TATATTTTAGGGAAAAGGTC+GGG | - | chr4_4:51575013-51575032 | None:intergenic | 30.0% |
| !! | CTATATTTTAGGGAAAAGGT+CGG | - | chr4_4:51575014-51575033 | None:intergenic | 30.0% |
| ! | GACCTTTTCCCTAAAATATA+GGG | + | chr4_4:51575013-51575032 | Msa0686940:intron | 30.0% |
| ! | ACCTTTTCCCTAAAATATAG+GGG | + | chr4_4:51575014-51575033 | Msa0686940:intron | 30.0% |
| ! | TGGTTTTCCCCTATATTTTA+GGG | - | chr4_4:51575024-51575043 | None:intergenic | 30.0% |
| CAGAAAACCTCTTTACAATT+CGG | + | chr4_4:51575042-51575061 | Msa0686940:intron | 30.0% | |
| AGAAAACCTCTTTACAATTC+GGG | + | chr4_4:51575043-51575062 | Msa0686940:intron | 30.0% | |
| AAGAATTCCAGAAACTAATG+AGG | - | chr4_4:51575079-51575098 | None:intergenic | 30.0% | |
| GTCACTTATATATGCTTCTT+AGG | + | chr4_4:51575126-51575145 | Msa0686940:intron | 30.0% | |
| ATAGCTTGGTAAATCTCTTA+TGG | + | chr4_4:51575164-51575183 | Msa0686940:intron | 30.0% | |
| TCACTTCATTAAAAGCTTTC+GGG | - | chr4_4:51575202-51575221 | None:intergenic | 30.0% | |
| CTCACTTCATTAAAAGCTTT+CGG | - | chr4_4:51575203-51575222 | None:intergenic | 30.0% | |
| ! | AAGCTTTTAATGAAGTGAGT+TGG | + | chr4_4:51575204-51575223 | Msa0686940:intron | 30.0% |
| AAAAATGTTACTCAAGCTCA+AGG | + | chr4_4:51575258-51575277 | Msa0686940:intron | 30.0% | |
| AAAATGTTACTCAAGCTCAA+GGG | + | chr4_4:51575259-51575278 | Msa0686940:intron | 30.0% | |
| TTTCGAAGTCAATCTCAAAA+TGG | - | chr4_4:51575549-51575568 | None:intergenic | 30.0% | |
| GATATAGATTAGAGTAGTAG+TGG | + | chr4_4:51575762-51575781 | Msa0686940:intron | 30.0% | |
| AACAGATTTCAATCTGAATG+TGG | - | chr4_4:51575803-51575822 | None:intergenic | 30.0% | |
| !!! | AAATCTGTTTTTTGTGTGGA+AGG | + | chr4_4:51575814-51575833 | Msa0686940:intron | 30.0% |
| ACATGTAGTTTATCATTGGT+AGG | - | chr4_4:51575930-51575949 | None:intergenic | 30.0% | |
| TACCAATGATAAACTACATG+TGG | + | chr4_4:51575929-51575948 | Msa0686940:CDS | 30.0% | |
| AAGTAAAACCTATTCAGAGT+TGG | + | chr4_4:51576050-51576069 | Msa0686940:intron | 30.0% | |
| CAAAAGTGAAGGTTAGATTA+GGG | + | chr4_4:51576082-51576101 | Msa0686940:intron | 30.0% | |
| TTTCCTTATTAGGAATCACT+GGG | + | chr4_4:51576919-51576938 | Msa0686940:intron | 30.0% | |
| ! | GAATCAGAAGTACATATGTA+TGG | - | chr4_4:51577081-51577100 | None:intergenic | 30.0% |
| !! | AATTTAAGAGATGGTTTTGC+GGG | - | chr4_4:51577113-51577132 | None:intergenic | 30.0% |
| GGAGACTAAAATTTAAGAGA+TGG | - | chr4_4:51577122-51577141 | None:intergenic | 30.0% | |
| ATTTGGATATATACCAGCAA+GGG | + | chr4_4:51577279-51577298 | Msa0686940:three_prime_UTR | 30.0% | |
| AGAACAGAATATTTATCCAC+GGG | - | chr4_4:51577312-51577331 | None:intergenic | 30.0% | |
| GTGATGTTGTCCTAAATCTA+GGG | - | chr4_4:51569760-51569779 | None:intergenic | 35.0% | |
| ACTATGATATGATACGACGA+AGG | - | chr4_4:51569817-51569836 | None:intergenic | 35.0% | |
| GATCTAAGTGATTTCAGATC+GGG | - | chr4_4:51569866-51569885 | None:intergenic | 35.0% | |
| GGATCTAAGTGATTTCAGAT+CGG | - | chr4_4:51569867-51569886 | None:intergenic | 35.0% | |
| CACTTAGATCCATTCCAAAA+TGG | + | chr4_4:51569876-51569895 | Msa0686940:exon | 35.0% | |
| !! | TGAAGAAACCCATTTTGGAA+TGG | - | chr4_4:51569888-51569907 | None:intergenic | 35.0% |
| ! | TGTACTGAAGAAACCCATTT+TGG | - | chr4_4:51569893-51569912 | None:intergenic | 35.0% |
| ! | ATTTCAATTGGTCTCGTTGT+TGG | + | chr4_4:51569943-51569962 | Msa0686940:CDS | 35.0% |
| ATGATTACCTCAACATCTGT+AGG | - | chr4_4:51569994-51570013 | None:intergenic | 35.0% | |
| TCCTAAAATTACGCCAATAG+TGG | + | chr4_4:51570107-51570126 | Msa0686940:CDS | 35.0% | |
| ! | TCCACTATTGGCGTAATTTT+AGG | - | chr4_4:51570111-51570130 | None:intergenic | 35.0% |
| TTTGCAAAGTTTCATCGTCT+TGG | - | chr4_4:51570134-51570153 | None:intergenic | 35.0% | |
| !! | TGGTTTTTGTCAAGGTTGAT+TGG | + | chr4_4:51570484-51570503 | Msa0686940:CDS | 35.0% |
| !! | TATGTGGCCTTATCTTGATA+AGG | + | chr4_4:51570527-51570546 | Msa0686940:CDS | 35.0% |
| ! | CTTCTCATTGTTCTGTGTTT+TGG | + | chr4_4:51570613-51570632 | Msa0686940:intron | 35.0% |
| GGAATCTGCTCTTCAATTAT+GGG | - | chr4_4:51570701-51570720 | None:intergenic | 35.0% | |
| TGGAATCTGCTCTTCAATTA+TGG | - | chr4_4:51570702-51570721 | None:intergenic | 35.0% | |
| AACAAACCTTGAAAAGTTGG+GGG | - | chr4_4:51570776-51570795 | None:intergenic | 35.0% | |
| CAACAAACCTTGAAAAGTTG+GGG | - | chr4_4:51570777-51570796 | None:intergenic | 35.0% | |
| ATCTAGACATGATGCATTGT+TGG | + | chr4_4:51570797-51570816 | Msa0686940:intron | 35.0% | |
| CATCTGTGCATGCAATTAAA+AGG | - | chr4_4:51570830-51570849 | None:intergenic | 35.0% | |
| GAATTCTCCTCTTAATATCG+AGG | + | chr4_4:51570927-51570946 | Msa0686940:intron | 35.0% | |
| AGTTTATGTGACTGATGAGA+AGG | + | chr4_4:51571269-51571288 | Msa0686940:CDS | 35.0% | |
| ! | TGATGAGAAGGAGTTGATTA+TGG | + | chr4_4:51571281-51571300 | Msa0686940:CDS | 35.0% |
| TTAACAGCAATGGTGACATT+GGG | - | chr4_4:51571333-51571352 | None:intergenic | 35.0% | |
| CAACAAAGTTGTTACCTGAA+CGG | - | chr4_4:51571376-51571395 | None:intergenic | 35.0% | |
| ! | GTAACAACTTTGTTGTGTGT+CGG | + | chr4_4:51571381-51571400 | Msa0686940:intron | 35.0% |
| ! | TTTTTGTGTATGTGTGTAGG+GGG | - | chr4_4:51571597-51571616 | None:intergenic | 35.0% |
| !!! | GCTTTTTTGTGTATGTGTGT+AGG | - | chr4_4:51571600-51571619 | None:intergenic | 35.0% |
| ! | CTTGTGCTACTATTTCAAGT+GGG | - | chr4_4:51571635-51571654 | None:intergenic | 35.0% |
| ! | TCTTGTGCTACTATTTCAAG+TGG | - | chr4_4:51571636-51571655 | None:intergenic | 35.0% |
| ! | TTTTTGTGTATGTGTGTAGG+GGG | - | chr4_4:51571597-51571616 | None:intergenic | 35.0% |
| !!! | GCTTTTTTGTGTATGTGTGT+AGG | - | chr4_4:51571600-51571619 | None:intergenic | 35.0% |
| CAGTCTTGAATCTTTATGGA+AGG | + | chr4_4:51572043-51572062 | Msa0686940:intron | 35.0% | |
| TCTTGAATCTTTATGGAAGG+AGG | + | chr4_4:51572046-51572065 | Msa0686940:intron | 35.0% | |
| !!! | AATGCTATTTTGTTCCCATG+AGG | + | chr4_4:51572190-51572209 | Msa0686940:intron | 35.0% |
| AGCTGTCCTTAATTCCTAAA+AGG | - | chr4_4:51572263-51572282 | None:intergenic | 35.0% | |
| AAATCATGTCCCTATTTGAC+TGG | + | chr4_4:51572293-51572312 | Msa0686940:intron | 35.0% | |
| GGAGAAATTTATGTCCCTTA+GGG | - | chr4_4:51572323-51572342 | None:intergenic | 35.0% | |
| AGGAGAAATTTATGTCCCTT+AGG | - | chr4_4:51572324-51572343 | None:intergenic | 35.0% | |
| ! | AGTTGACTTCCATAATCTGT+TGG | + | chr4_4:51572388-51572407 | Msa0686940:intron | 35.0% |
| ! | GTTGACTTCCATAATCTGTT+GGG | + | chr4_4:51572389-51572408 | Msa0686940:intron | 35.0% |
| ! | TTTGGTTTCCCAACAGATTA+TGG | - | chr4_4:51572400-51572419 | None:intergenic | 35.0% |
| ATAATCTGTTGGGAAACCAA+AGG | + | chr4_4:51572399-51572418 | Msa0686940:intron | 35.0% | |
| TAATCTGTTGGGAAACCAAA+GGG | + | chr4_4:51572400-51572419 | Msa0686940:intron | 35.0% | |
| ! | ATGTTTTCACAAAGCGAATG+GGG | - | chr4_4:51572540-51572559 | None:intergenic | 35.0% |
| TCAAACATTAGGATAGGATG+GGG | - | chr4_4:51573195-51573214 | None:intergenic | 35.0% | |
| CTCAAACATTAGGATAGGAT+GGG | - | chr4_4:51573196-51573215 | None:intergenic | 35.0% | |
| CATCCTATCCTAATGTTTGA+GGG | + | chr4_4:51573195-51573214 | Msa0686940:intron | 35.0% | |
| CAATGGTTCATTTCAAGGAT+GGG | - | chr4_4:51573291-51573310 | None:intergenic | 35.0% | |
| ACAATGGTTCATTTCAAGGA+TGG | - | chr4_4:51573292-51573311 | None:intergenic | 35.0% | |
| GCAAACAATGGTTCATTTCA+AGG | - | chr4_4:51573296-51573315 | None:intergenic | 35.0% | |
| CGATTCAATCAAGAATGCAT+TGG | - | chr4_4:51573529-51573548 | None:intergenic | 35.0% | |
| CAAACTAAAAGAATGGCTTC+TGG | - | chr4_4:51573706-51573725 | None:intergenic | 35.0% | |
| TCCAGCTCAAACTAAAAGAA+TGG | - | chr4_4:51573713-51573732 | None:intergenic | 35.0% | |
| TCTCAAATTTGTGCATTTGC+TGG | + | chr4_4:51573759-51573778 | Msa0686940:intron | 35.0% | |
| ACAAGACGTGGATATATGTT+AGG | - | chr4_4:51573972-51573991 | None:intergenic | 35.0% | |
| ! | GTAAGCTTTAGTTTCACGTA+AGG | - | chr4_4:51574343-51574362 | None:intergenic | 35.0% |
| AACATTGAGCTGTAAAACCT+GGG | - | chr4_4:51574464-51574483 | None:intergenic | 35.0% | |
| AAACATTGAGCTGTAAAACC+TGG | - | chr4_4:51574465-51574484 | None:intergenic | 35.0% | |
| TACAGCTCAATGTTTATGAC+TGG | + | chr4_4:51574470-51574489 | Msa0686940:CDS | 35.0% | |
| ACAGCTCAATGTTTATGACT+GGG | + | chr4_4:51574471-51574490 | Msa0686940:CDS | 35.0% | |
| ! | AAAACGTTTAGGTTCTTCAG+GGG | - | chr4_4:51574639-51574658 | None:intergenic | 35.0% |
| ! | CTAAAACGTTTAGGTTCTTC+AGG | - | chr4_4:51574641-51574660 | None:intergenic | 35.0% |
| !! | AGAACCTAAACGTTTTAGTC+TGG | + | chr4_4:51574643-51574662 | Msa0686940:CDS | 35.0% |
| ! | TCTGGACCTTCTAAAAACTA+TGG | + | chr4_4:51574661-51574680 | Msa0686940:CDS | 35.0% |
| !! | TGGGATCCATAGTTTTTAGA+AGG | - | chr4_4:51574670-51574689 | None:intergenic | 35.0% |
| !!! | AAGCACGTCTTATTTTCAGA+GGG | + | chr4_4:51574894-51574913 | Msa0686940:CDS | 35.0% |
| AGAGAAAAAGACTAAGGTAC+AGG | + | chr4_4:51574919-51574938 | Msa0686940:intron | 35.0% | |
| !! | ATATTTTAGGGAAAAGGTCG+GGG | - | chr4_4:51575012-51575031 | None:intergenic | 35.0% |
| ! | CGACCTTTTCCCTAAAATAT+AGG | + | chr4_4:51575012-51575031 | Msa0686940:intron | 35.0% |
| !! | TCCCCTATATTTTAGGGAAA+AGG | - | chr4_4:51575018-51575037 | None:intergenic | 35.0% |
| !! | CTGGTTTTCCCCTATATTTT+AGG | - | chr4_4:51575025-51575044 | None:intergenic | 35.0% |
| ! | CGAATTGTAAAGAGGTTTTC+TGG | - | chr4_4:51575044-51575063 | None:intergenic | 35.0% |
| GAAAACCTCTTTACAATTCG+GGG | + | chr4_4:51575044-51575063 | Msa0686940:intron | 35.0% | |
| TTAAACCCCGAATTGTAAAG+AGG | - | chr4_4:51575052-51575071 | None:intergenic | 35.0% | |
| ATATATAAGTGACAGCCTAC+GGG | - | chr4_4:51575119-51575138 | None:intergenic | 35.0% | |
| CATATATAAGTGACAGCCTA+CGG | - | chr4_4:51575120-51575139 | None:intergenic | 35.0% | |
| ATATATGCTTCTTAGGAGAG+TGG | + | chr4_4:51575133-51575152 | Msa0686940:intron | 35.0% | |
| ACTTCATTAAAAGCTTTCGG+GGG | - | chr4_4:51575200-51575219 | None:intergenic | 35.0% | |
| CACTTCATTAAAAGCTTTCG+GGG | - | chr4_4:51575201-51575220 | None:intergenic | 35.0% | |
| ! | ATGAAGTGAGTTGGATGAAA+TGG | + | chr4_4:51575213-51575232 | Msa0686940:intron | 35.0% |
| !!! | GCTCAAGGGAATTTTTTTAC+CGG | + | chr4_4:51575273-51575292 | Msa0686940:intron | 35.0% |
| CGCTAGACAAAATAGGATTA+TGG | + | chr4_4:51575393-51575412 | Msa0686940:intron | 35.0% | |
| GGATGCATTAAATAGAGTCA+AGG | + | chr4_4:51575414-51575433 | Msa0686940:intron | 35.0% | |
| TTAGATGATTTAGGCATGTG+TGG | + | chr4_4:51575472-51575491 | Msa0686940:intron | 35.0% | |
| TCTCCTTATTAAAGCTTCTG+CGG | - | chr4_4:51575505-51575524 | None:intergenic | 35.0% | |
| TACAAGCCAAGTCATTAAGA+AGG | + | chr4_4:51575571-51575590 | Msa0686940:intron | 35.0% | |
| CCAAATCCTTCTTAATGACT+TGG | - | chr4_4:51575580-51575599 | None:intergenic | 35.0% | |
| CCAAGTCATTAAGAAGGATT+TGG | + | chr4_4:51575577-51575596 | Msa0686940:intron | 35.0% | |
| ATATGGCTAAATTGACCTAG+TGG | + | chr4_4:51575657-51575676 | Msa0686940:intron | 35.0% | |
| TATGGCTAAATTGACCTAGT+GGG | + | chr4_4:51575658-51575677 | Msa0686940:intron | 35.0% | |
| AAAAGAACAGAGATCCAAGA+TGG | + | chr4_4:51575871-51575890 | Msa0686940:CDS | 35.0% | |
| AAAGAACAGAGATCCAAGAT+GGG | + | chr4_4:51575872-51575891 | Msa0686940:CDS | 35.0% | |
| TGAGTTCCAATTTATAGCAG+AGG | + | chr4_4:51575899-51575918 | Msa0686940:CDS | 35.0% | |
| TGTAGTTTATCATTGGTAGG+AGG | - | chr4_4:51575927-51575946 | None:intergenic | 35.0% | |
| CTCCACATGTAGTTTATCAT+TGG | - | chr4_4:51575934-51575953 | None:intergenic | 35.0% | |
| CAATGATAAACTACATGTGG+AGG | + | chr4_4:51575932-51575951 | Msa0686940:CDS | 35.0% | |
| AGTTAACACCAACTCTGAAT+AGG | - | chr4_4:51576061-51576080 | None:intergenic | 35.0% | |
| GCAAAAGTGAAGGTTAGATT+AGG | + | chr4_4:51576081-51576100 | Msa0686940:intron | 35.0% | |
| ! | GATTTTATCGTATCAGGAAG+AGG | - | chr4_4:51576442-51576461 | None:intergenic | 35.0% |
| !!! | GGTGTTGATTTTATCGTATC+AGG | - | chr4_4:51576448-51576467 | None:intergenic | 35.0% |
| GTGTAAATATATATGCACGG+TGG | - | chr4_4:51576799-51576818 | None:intergenic | 35.0% | |
| CGCGTGTAAATATATATGCA+CGG | - | chr4_4:51576802-51576821 | None:intergenic | 35.0% | |
| CAGTGATTCCTAATAAGGAA+AGG | - | chr4_4:51576920-51576939 | None:intergenic | 35.0% | |
| CTTTCCTTATTAGGAATCAC+TGG | + | chr4_4:51576918-51576937 | Msa0686940:intron | 35.0% | |
| TAACCCAGTGATTCCTAATA+AGG | - | chr4_4:51576925-51576944 | None:intergenic | 35.0% | |
| !! | ATTTAAGAGATGGTTTTGCG+GGG | - | chr4_4:51577112-51577131 | None:intergenic | 35.0% |
| TGTAACGAAAACAGTGAGAA+GGG | + | chr4_4:51577148-51577167 | Msa0686940:three_prime_UTR | 35.0% | |
| GATTTGGATATATACCAGCA+AGG | + | chr4_4:51577278-51577297 | Msa0686940:three_prime_UTR | 35.0% | |
| ATATATACCAGCAAGGGTTT+CGG | + | chr4_4:51577285-51577304 | Msa0686940:three_prime_UTR | 35.0% | |
| !! | CGAAGAAAGCAAAGTATCGA+TGG | - | chr4_4:51569660-51569679 | None:intergenic | 40.0% |
| GAATGAATGAATGAAACGGC+TGG | - | chr4_4:51569708-51569727 | None:intergenic | 40.0% | |
| TTGTCCTAAATCTAGGGATG+GGG | - | chr4_4:51569754-51569773 | None:intergenic | 40.0% | |
| GTTGTCCTAAATCTAGGGAT+GGG | - | chr4_4:51569755-51569774 | None:intergenic | 40.0% | |
| TGTTGTCCTAAATCTAGGGA+TGG | - | chr4_4:51569756-51569775 | None:intergenic | 40.0% | |
| GGTGATGTTGTCCTAAATCT+AGG | - | chr4_4:51569761-51569780 | None:intergenic | 40.0% | |
| AGAAAATGATTAGGGGGTGA+TGG | - | chr4_4:51569782-51569801 | None:intergenic | 40.0% | |
| ATATGATACGACGAAGGTGA+AGG | - | chr4_4:51569811-51569830 | None:intergenic | 40.0% | |
| !!! | GGTTTTTTCGGATTTGGTGT+TGG | + | chr4_4:51569919-51569938 | Msa0686940:CDS | 40.0% |
| CTTTCAACCTACAGATGTTG+AGG | + | chr4_4:51569984-51570003 | Msa0686940:CDS | 40.0% | |
| TGCTTCCTGAGATTCCAAAT+TGG | + | chr4_4:51570157-51570176 | Msa0686940:CDS | 40.0% | |
| ACACTTATCGAAATCGTGTC+TGG | - | chr4_4:51570364-51570383 | None:intergenic | 40.0% | |
| GACACGATTTCGATAAGTGT+CGG | + | chr4_4:51570364-51570383 | Msa0686940:intron | 40.0% | |
| ! | TACCAAAAAGAGGGTCTTGT+GGG | - | chr4_4:51571048-51571067 | None:intergenic | 40.0% |
| ATACCAAAAAGAGGGTCTTG+TGG | - | chr4_4:51571049-51571068 | None:intergenic | 40.0% | |
| TAGTTCATATCTGCTCCCAA+AGG | + | chr4_4:51571130-51571149 | Msa0686940:intron | 40.0% | |
| AGTTCATATCTGCTCCCAAA+GGG | + | chr4_4:51571131-51571150 | Msa0686940:intron | 40.0% | |
| ! | TTTCCGGCCCATTTTATAGA+AGG | - | chr4_4:51571309-51571328 | None:intergenic | 40.0% |
| AATGGTGACATTGGGATTTC+CGG | - | chr4_4:51571325-51571344 | None:intergenic | 40.0% | |
| CTTAACAGCAATGGTGACAT+TGG | - | chr4_4:51571334-51571353 | None:intergenic | 40.0% | |
| ! | CAATGTCACCATTGCTGTTA+AGG | + | chr4_4:51571332-51571351 | Msa0686940:CDS | 40.0% |
| ! | ACCATTGCTGTTAAGGCATT+TGG | + | chr4_4:51571339-51571358 | Msa0686940:CDS | 40.0% |
| ! | CCATTGCTGTTAAGGCATTT+GGG | + | chr4_4:51571340-51571359 | Msa0686940:CDS | 40.0% |
| AAACTTGCAAATCCACAACC+TGG | - | chr4_4:51571467-51571486 | None:intergenic | 40.0% | |
| AAAGGCTTCAATGTAATGCG+AGG | - | chr4_4:51571498-51571517 | None:intergenic | 40.0% | |
| TCGCATTACATTGAAGCCTT+TGG | + | chr4_4:51571497-51571516 | Msa0686940:CDS | 40.0% | |
| ACATAGATGTTGGCAAAGCA+AGG | - | chr4_4:51571534-51571553 | None:intergenic | 40.0% | |
| ! | TTTTGTGTATGTGTGTAGGG+GGG | - | chr4_4:51571596-51571615 | None:intergenic | 40.0% |
| GTCGAGATATGCTCAAAACA+TGG | - | chr4_4:51571715-51571734 | None:intergenic | 40.0% | |
| TGAGCATATCTCGACAACAA+AGG | + | chr4_4:51571720-51571739 | Msa0686940:intron | 40.0% | |
| ACATAGATGTTGGCAAAGCA+AGG | - | chr4_4:51571534-51571553 | None:intergenic | 40.0% | |
| ! | TTTTGTGTATGTGTGTAGGG+GGG | - | chr4_4:51571596-51571615 | None:intergenic | 40.0% |
| GTCGAGATATGCTCAAAACA+TGG | - | chr4_4:51571715-51571734 | None:intergenic | 40.0% | |
| TGAGCATATCTCGACAACAA+AGG | + | chr4_4:51571720-51571739 | Msa0686940:intron | 40.0% | |
| ATCTTTATGGAAGGAGGAGT+TGG | + | chr4_4:51572052-51572071 | Msa0686940:intron | 40.0% | |
| ATTAAGGACAGCTAAGCATC+TGG | + | chr4_4:51572270-51572289 | Msa0686940:intron | 40.0% | |
| TAGGGTATGCCAGTCAAATA+GGG | - | chr4_4:51572305-51572324 | None:intergenic | 40.0% | |
| TTAGGGTATGCCAGTCAAAT+AGG | - | chr4_4:51572306-51572325 | None:intergenic | 40.0% | |
| TATTTGACTGGCATACCCTA+AGG | + | chr4_4:51572305-51572324 | Msa0686940:intron | 40.0% | |
| ATTTGACTGGCATACCCTAA+GGG | + | chr4_4:51572306-51572325 | Msa0686940:intron | 40.0% | |
| TCATCACTACAATAGCCCTT+TGG | - | chr4_4:51572418-51572437 | None:intergenic | 40.0% | |
| AGCTAGAGATGATGCATTTC+TGG | - | chr4_4:51572693-51572712 | None:intergenic | 40.0% | |
| TCATCTTCTCTCCATCACAT+TGG | + | chr4_4:51572719-51572738 | Msa0686940:intron | 40.0% | |
| CTTGAAGTGAACCAATGTGA+TGG | - | chr4_4:51572733-51572752 | None:intergenic | 40.0% | |
| TTTAGCCCAAAGTCAACATG+TGG | - | chr4_4:51573084-51573103 | None:intergenic | 40.0% | |
| ACTTTGGGCTAAAGCTTCTA+GGG | + | chr4_4:51573091-51573110 | Msa0686940:CDS | 40.0% | |
| GCTGATCTTATGTCTATTCC+TGG | + | chr4_4:51573114-51573133 | Msa0686940:CDS | 40.0% | |
| CCTCAAACATTAGGATAGGA+TGG | - | chr4_4:51573197-51573216 | None:intergenic | 40.0% | |
| CCATCCTATCCTAATGTTTG+AGG | + | chr4_4:51573194-51573213 | Msa0686940:intron | 40.0% | |
| AAGCCCTCAAACATTAGGAT+AGG | - | chr4_4:51573201-51573220 | None:intergenic | 40.0% | |
| AACTCAAGCCCTCAAACATT+AGG | - | chr4_4:51573206-51573225 | None:intergenic | 40.0% | |
| TCATCTTCCACTCTTTAAGC+CGG | + | chr4_4:51573234-51573253 | Msa0686940:intron | 40.0% | |
| TGAACCATTGTTTGCTCAAG+TGG | + | chr4_4:51573301-51573320 | Msa0686940:intron | 40.0% | |
| AGATCCACTTGAGCAAACAA+TGG | - | chr4_4:51573308-51573327 | None:intergenic | 40.0% | |
| !!! | AGCAGACCATTGATTTTCGT+AGG | + | chr4_4:51573350-51573369 | Msa0686940:intron | 40.0% |
| !!! | GCCATTCTTTTAGTTTGAGC+TGG | + | chr4_4:51573709-51573728 | Msa0686940:intron | 40.0% |
| TGAGATTCTAACTCTACCAG+AGG | - | chr4_4:51573744-51573763 | None:intergenic | 40.0% | |
| CTAAGTACATTGACAAGACG+TGG | - | chr4_4:51573984-51574003 | None:intergenic | 40.0% | |
| AGGTTGCAAACATGTATCTG+TGG | + | chr4_4:51574079-51574098 | Msa0686940:CDS | 40.0% | |
| TTGGGAATCTTAGAGCTATG+AGG | + | chr4_4:51574239-51574258 | Msa0686940:intron | 40.0% | |
| !! | GTTGTTTTATGCCTTCGCTT+AGG | + | chr4_4:51574562-51574581 | Msa0686940:intron | 40.0% |
| ! | TTTTATGCCTTCGCTTAGGT+TGG | + | chr4_4:51574566-51574585 | Msa0686940:intron | 40.0% |
| TTTATGCCTTCGCTTAGGTT+GGG | + | chr4_4:51574567-51574586 | Msa0686940:intron | 40.0% | |
| AGGTCCAGACTAAAACGTTT+AGG | - | chr4_4:51574650-51574669 | None:intergenic | 40.0% | |
| ACCCTTAAATGAAGAGGAGA+TGG | + | chr4_4:51574745-51574764 | Msa0686940:CDS | 40.0% | |
| CCCATCTCCTCTTCATTTAA+GGG | - | chr4_4:51574749-51574768 | None:intergenic | 40.0% | |
| CCCTTAAATGAAGAGGAGAT+GGG | + | chr4_4:51574746-51574765 | Msa0686940:CDS | 40.0% | |
| CATGAAGCTCAAGATGTTGA+GGG | + | chr4_4:51574851-51574870 | Msa0686940:CDS | 40.0% | |
| ATGAAGCTCAAGATGTTGAG+GGG | + | chr4_4:51574852-51574871 | Msa0686940:CDS | 40.0% | |
| CTGAAAATAAGACGTGCTTG+TGG | - | chr4_4:51574893-51574912 | None:intergenic | 40.0% | |
| !!! | CAAGCACGTCTTATTTTCAG+AGG | + | chr4_4:51574893-51574912 | Msa0686940:CDS | 40.0% |
| !!! | AGCACGTCTTATTTTCAGAG+GGG | + | chr4_4:51574895-51574914 | Msa0686940:CDS | 40.0% |
| AGGGGAAGAGAAAAAGACTA+AGG | + | chr4_4:51574913-51574932 | Msa0686940:CDS | 40.0% | |
| TATATAAGTGACAGCCTACG+GGG | - | chr4_4:51575118-51575137 | None:intergenic | 40.0% | |
| GAGTGGTTATGGATATAGCT+TGG | + | chr4_4:51575150-51575169 | Msa0686940:intron | 40.0% | |
| ! | AAGTGAGTTGGATGAAATGG+AGG | + | chr4_4:51575216-51575235 | Msa0686940:intron | 40.0% |
| GTCAACACGCTAGACAAAAT+AGG | + | chr4_4:51575386-51575405 | Msa0686940:intron | 40.0% | |
| ! | GAGTCAAGGTAGCACTATTT+TGG | + | chr4_4:51575428-51575447 | Msa0686940:intron | 40.0% |
| ! | TAGCCGCAGAAGCTTTAATA+AGG | + | chr4_4:51575499-51575518 | Msa0686940:intron | 40.0% |
| ! | CTAGTGGGAAAAAGCTTTAG+CGG | + | chr4_4:51575673-51575692 | Msa0686940:intron | 40.0% |
| TGTGTGGAAGGCTAATGATA+CGG | + | chr4_4:51575826-51575845 | Msa0686940:intron | 40.0% | |
| AAGTACCTTCTGATGAAGCA+AGG | - | chr4_4:51575979-51575998 | None:intergenic | 40.0% | |
| GGTGTTAACTGCAAAAGTGA+AGG | + | chr4_4:51576071-51576090 | Msa0686940:intron | 40.0% | |
| TGGGTTATGACGTTATGTCA+TGG | + | chr4_4:51576216-51576235 | Msa0686940:intron | 40.0% | |
| TGCTTTACTCGAAGCAAAAG+TGG | - | chr4_4:51576282-51576301 | None:intergenic | 40.0% | |
| AGAAGCTCAAGATGTGTACT+TGG | + | chr4_4:51576340-51576359 | Msa0686940:intron | 40.0% | |
| AGTATTCCTTGGTAGACAGT+AGG | - | chr4_4:51576576-51576595 | None:intergenic | 40.0% | |
| ATGCACGGTGGTGATATAAA+AGG | - | chr4_4:51576787-51576806 | None:intergenic | 40.0% | |
| CTGATGCTCCTTTCCTTATT+AGG | + | chr4_4:51576909-51576928 | Msa0686940:intron | 40.0% | |
| GGTTATGTCGACATCAATCT+CGG | + | chr4_4:51576940-51576959 | Msa0686940:CDS | 40.0% | |
| GTTATGTCGACATCAATCTC+GGG | + | chr4_4:51576941-51576960 | Msa0686940:CDS | 40.0% | |
| TTATGTCGACATCAATCTCG+GGG | + | chr4_4:51576942-51576961 | Msa0686940:CDS | 40.0% | |
| ! | ACTGTTTTCGTTACACTGCA+CGG | - | chr4_4:51577143-51577162 | None:intergenic | 40.0% |
| GTGTAACGAAAACAGTGAGA+AGG | + | chr4_4:51577147-51577166 | Msa0686940:three_prime_UTR | 40.0% | |
| TAAATCTAGGGATGGGGATG+GGG | - | chr4_4:51569748-51569767 | None:intergenic | 45.0% | |
| CTAAATCTAGGGATGGGGAT+GGG | - | chr4_4:51569749-51569768 | None:intergenic | 45.0% | |
| TCATCGTCTTGGTCCACTAT+TGG | - | chr4_4:51570123-51570142 | None:intergenic | 45.0% | |
| !! | TGAAGCACTGACACATACAC+CGG | + | chr4_4:51570236-51570255 | Msa0686940:intron | 45.0% |
| CAGTGTCGTAGTATCGTATC+CGG | - | chr4_4:51570258-51570277 | None:intergenic | 45.0% | |
| TGACACTGACATGTCAACAC+CGG | + | chr4_4:51570276-51570295 | Msa0686940:intron | 45.0% | |
| AATTGCATGCACAGATGCTC+AGG | + | chr4_4:51570833-51570852 | Msa0686940:intron | 45.0% | |
| ! | ACCAAAAAGAGGGTCTTGTG+GGG | - | chr4_4:51571047-51571066 | None:intergenic | 45.0% |
| ! | GGCGAAAAGTACATCCCTTT+GGG | - | chr4_4:51571148-51571167 | None:intergenic | 45.0% |
| GAGCCTTCTATAAAATGGGC+CGG | + | chr4_4:51571303-51571322 | Msa0686940:CDS | 45.0% | |
| CCCAAATGCCTTAACAGCAA+TGG | - | chr4_4:51571343-51571362 | None:intergenic | 45.0% | |
| CAAGGAAAGCTTGGAACCAA+AGG | - | chr4_4:51571516-51571535 | None:intergenic | 45.0% | |
| TTGGCAAAGCAAGGAAAGCT+TGG | - | chr4_4:51571525-51571544 | None:intergenic | 45.0% | |
| CATGAGAGCGACATAGATGT+TGG | - | chr4_4:51571544-51571563 | None:intergenic | 45.0% | |
| CAACATCTATGTCGCTCTCA+TGG | + | chr4_4:51571542-51571561 | Msa0686940:CDS | 45.0% | |
| CTATGTCGCTCTCATGGAAA+AGG | + | chr4_4:51571548-51571567 | Msa0686940:CDS | 45.0% | |
| CATGAGAGCGACATAGATGT+TGG | - | chr4_4:51571544-51571563 | None:intergenic | 45.0% | |
| CAACATCTATGTCGCTCTCA+TGG | + | chr4_4:51571542-51571561 | Msa0686940:CDS | 45.0% | |
| CTATGTCGCTCTCATGGAAA+AGG | + | chr4_4:51571548-51571567 | Msa0686940:CDS | 45.0% | |
| TTTGTGTATGTGTGTAGGGG+GGG | - | chr4_4:51571595-51571614 | None:intergenic | 45.0% | |
| ATGGAAGGAGGAGTTGGAAT+AGG | + | chr4_4:51572058-51572077 | Msa0686940:intron | 45.0% | |
| GACCAATGTTTGAGCTGTTG+TGG | + | chr4_4:51572443-51572462 | Msa0686940:intron | 45.0% | |
| GTCCACAACAGCTCAAACAT+TGG | - | chr4_4:51572448-51572467 | None:intergenic | 45.0% | |
| !! | CGAATGGGGCCTTGTATTTT+AGG | - | chr4_4:51572526-51572545 | None:intergenic | 45.0% |
| ! | CTTGCTCATAAGAAGGTGTG+AGG | - | chr4_4:51572758-51572777 | None:intergenic | 45.0% |
| !! | TGCAGCCACATGTTGACTTT+GGG | + | chr4_4:51573076-51573095 | Msa0686940:intron | 45.0% |
| GACTTTGGGCTAAAGCTTCT+AGG | + | chr4_4:51573090-51573109 | Msa0686940:CDS | 45.0% | |
| CTTTGGGCTAAAGCTTCTAG+GGG | + | chr4_4:51573092-51573111 | Msa0686940:CDS | 45.0% | |
| TGTCTATTCCTGGTGTCTAC+AGG | + | chr4_4:51573124-51573143 | Msa0686940:CDS | 45.0% | |
| TGAACAATCCTGTAGACACC+AGG | - | chr4_4:51573135-51573154 | None:intergenic | 45.0% | |
| TGGTGTCTACAGGATTGTTC+AGG | + | chr4_4:51573134-51573153 | Msa0686940:CDS | 45.0% | |
| CATCACTCTTGCAGAAGAAC+AGG | + | chr4_4:51573391-51573410 | Msa0686940:intron | 45.0% | |
| TATAGTTGTATGTGGGCCAG+TGG | + | chr4_4:51573652-51573671 | Msa0686940:intron | 45.0% | |
| ! | GAGCTGGATGTTTTATCCTC+TGG | + | chr4_4:51573725-51573744 | Msa0686940:intron | 45.0% |
| CCTGATCTTTGATAAGCTCC+TGG | - | chr4_4:51574062-51574081 | None:intergenic | 45.0% | |
| CCAGGAGCTTATCAAAGATC+AGG | + | chr4_4:51574059-51574078 | Msa0686940:intron | 45.0% | |
| CAATGTTTATGACTGGGAGC+AGG | + | chr4_4:51574477-51574496 | Msa0686940:CDS | 45.0% | |
| ! | AGTTTCGAGTGATATCTGGC+TGG | + | chr4_4:51574532-51574551 | Msa0686940:intron | 45.0% |
| GCTCAAAATGAGAAATCGCG+AGG | + | chr4_4:51574695-51574714 | Msa0686940:CDS | 45.0% | |
| GCCCATCTCCTCTTCATTTA+AGG | - | chr4_4:51574750-51574769 | None:intergenic | 45.0% | |
| AAATGAAGAGGAGATGGGCA+AGG | + | chr4_4:51574751-51574770 | Msa0686940:CDS | 45.0% | |
| AATGAAGAGGAGATGGGCAA+GGG | + | chr4_4:51574752-51574771 | Msa0686940:CDS | 45.0% | |
| ACAATTCCTAAAGCTCCCGA+AGG | + | chr4_4:51574791-51574810 | Msa0686940:CDS | 45.0% | |
| CCTCAACATCTTGAGCTTCA+TGG | - | chr4_4:51574853-51574872 | None:intergenic | 45.0% | |
| CCATGAAGCTCAAGATGTTG+AGG | + | chr4_4:51574850-51574869 | Msa0686940:CDS | 45.0% | |
| ATATAAGTGACAGCCTACGG+GGG | - | chr4_4:51575117-51575136 | None:intergenic | 45.0% | |
| GCTTCTTAGGAGAGTGGTTA+TGG | + | chr4_4:51575139-51575158 | Msa0686940:intron | 45.0% | |
| AGCGTTGCAAGTCATATAGC+CGG | - | chr4_4:51575295-51575314 | None:intergenic | 45.0% | |
| !! | CGCTAAAGCTTTTTCCCACT+AGG | - | chr4_4:51575675-51575694 | None:intergenic | 45.0% |
| TGGAACTCATCTTCCCATCT+TGG | - | chr4_4:51575888-51575907 | None:intergenic | 45.0% | |
| GAGGCTCCTCTGCTATAAAT+TGG | - | chr4_4:51575908-51575927 | None:intergenic | 45.0% | |
| ACGAACCTTGCTTCATCAGA+AGG | + | chr4_4:51575971-51575990 | Msa0686940:CDS | 45.0% | |
| TGAACTCCTACTGTCTACCA+AGG | + | chr4_4:51576567-51576586 | Msa0686940:intron | 45.0% | |
| CGCGTAAATGTGCTTTGACT+TGG | + | chr4_4:51576818-51576837 | Msa0686940:intron | 45.0% | |
| ! | TTCTAAGAATGGTCGCATCC+AGG | + | chr4_4:51577011-51577030 | Msa0686940:CDS | 45.0% |
| GGAGAACTGCATAAGCATGA+TGG | + | chr4_4:51577046-51577065 | Msa0686940:exon | 45.0% | |
| CCTAAATCTAGGGATGGGGA+TGG | - | chr4_4:51569750-51569769 | None:intergenic | 50.0% | |
| CCATCCCCATCCCTAGATTT+AGG | + | chr4_4:51569747-51569766 | Msa0686940:five_prime_UTR | 50.0% | |
| GAGTTTCAGACGCTCACTCT+CGG | + | chr4_4:51570743-51570762 | Msa0686940:CDS | 50.0% | |
| AGTTTCAGACGCTCACTCTC+GGG | + | chr4_4:51570744-51570763 | Msa0686940:CDS | 50.0% | |
| ACCTTGAAAAGTTGGGGGCA+GGG | - | chr4_4:51570771-51570790 | None:intergenic | 50.0% | |
| AACCTTGAAAAGTTGGGGGC+AGG | - | chr4_4:51570772-51570791 | None:intergenic | 50.0% | |
| ! | TCCCCACAAGACCCTCTTTT+TGG | + | chr4_4:51571043-51571062 | Msa0686940:intron | 50.0% |
| ! | CGGCGAAAAGTACATCCCTT+TGG | - | chr4_4:51571149-51571168 | None:intergenic | 50.0% |
| ! | TGGGTTGAAAGCAACCGTTC+AGG | + | chr4_4:51571359-51571378 | Msa0686940:CDS | 50.0% |
| GTCGCTCTCATGGAAAAGGT+TGG | + | chr4_4:51571552-51571571 | Msa0686940:intron | 50.0% | |
| GTCGCTCTCATGGAAAAGGT+TGG | + | chr4_4:51571552-51571571 | Msa0686940:intron | 50.0% | |
| !! | GTGCAGCCACATGTTGACTT+TGG | + | chr4_4:51573075-51573094 | Msa0686940:intron | 50.0% |
| TTCCACTCTTTAAGCCGGAG+TGG | + | chr4_4:51573239-51573258 | Msa0686940:intron | 50.0% | |
| TACCACTCCGGCTTAAAGAG+TGG | - | chr4_4:51573244-51573263 | None:intergenic | 50.0% | |
| ATGCAGGACAGTTACCACTC+CGG | - | chr4_4:51573256-51573275 | None:intergenic | 50.0% | |
| TGGGAGATTGTCTGTGATGC+AGG | - | chr4_4:51573272-51573291 | None:intergenic | 50.0% | |
| CAACATCCAACTGACACCAC+TGG | - | chr4_4:51573671-51573690 | None:intergenic | 50.0% | |
| GTATCTGTGGCCCAAAAACC+TGG | + | chr4_4:51574092-51574111 | Msa0686940:CDS | 50.0% | |
| GCTGTAAAACCTGGGTCTCT+GGG | - | chr4_4:51574456-51574475 | None:intergenic | 50.0% | |
| AGCTGTAAAACCTGGGTCTC+TGG | - | chr4_4:51574457-51574476 | None:intergenic | 50.0% | |
| ATCGCGAGGACAGATTGTTG+TGG | + | chr4_4:51574709-51574728 | Msa0686940:CDS | 50.0% | |
| !! | TTTTAGGGAAAAGGTCGGGG+AGG | - | chr4_4:51575009-51575028 | None:intergenic | 50.0% |
| AACTCAACTAATCCCCCCGT+AGG | + | chr4_4:51575101-51575120 | Msa0686940:intron | 50.0% | |
| TATAAGTGACAGCCTACGGG+GGG | - | chr4_4:51575116-51575135 | None:intergenic | 50.0% | |
| ! | GTGGGAAAAAGCTTTAGCGG+TGG | + | chr4_4:51575676-51575695 | Msa0686940:intron | 50.0% |
| GTGGAAGGCTAATGATACGG+TGG | + | chr4_4:51575829-51575848 | Msa0686940:intron | 50.0% | |
| CTGATGAAGCAAGGTTCGTG+AGG | - | chr4_4:51575970-51575989 | None:intergenic | 50.0% | |
| TGGGTAACTGTCAGCATGCT+GGG | - | chr4_4:51576313-51576332 | None:intergenic | 50.0% | |
| ATGGGTAACTGTCAGCATGC+TGG | - | chr4_4:51576314-51576333 | None:intergenic | 50.0% | |
| TTCTCCACTGCAACTCTACC+TGG | - | chr4_4:51577032-51577051 | None:intergenic | 50.0% | |
| CACATGTGTCTGCGTCGTGT+TGG | + | chr4_4:51570335-51570354 | Msa0686940:intron | 55.0% | |
| ! | ACCCTGCCCCCAACTTTTCA+AGG | + | chr4_4:51570767-51570786 | Msa0686940:CDS | 55.0% |
| AGAGCTATGAGGAGACCCGT+TGG | + | chr4_4:51574250-51574269 | Msa0686940:intron | 55.0% | |
| AGTCAAAGACCCAGAGACCC+AGG | + | chr4_4:51574444-51574463 | Msa0686940:CDS | 55.0% | |
| ! | ACAAGTTGACCTCCACCAGC+TGG | - | chr4_4:51574821-51574840 | None:intergenic | 55.0% |
| GTAACTGTCAGCATGCTGGG+GGG | - | chr4_4:51576310-51576329 | None:intergenic | 55.0% | |
| GGTAACTGTCAGCATGCTGG+GGG | - | chr4_4:51576311-51576330 | None:intergenic | 55.0% | |
| GGGTAACTGTCAGCATGCTG+GGG | - | chr4_4:51576312-51576331 | None:intergenic | 55.0% | |
| GCATCCAGGTAGAGTTGCAG+TGG | + | chr4_4:51577025-51577044 | Msa0686940:CDS | 55.0% | |
| !! | GAGATGGTTTTGCGGGGTGA+GGG | - | chr4_4:51577106-51577125 | None:intergenic | 55.0% |
| !! | AGAGATGGTTTTGCGGGGTG+AGG | - | chr4_4:51577107-51577126 | None:intergenic | 55.0% |
| TCTAGGGATGGGGATGGGGA+TGG | - | chr4_4:51569744-51569763 | None:intergenic | 60.0% | |
| ! | TGTGGGCCAGTGGTGTCAGT+TGG | + | chr4_4:51573662-51573681 | Msa0686940:intron | 60.0% |
| ! | GGAGTGCCTTCGGGAGCTTT+AGG | - | chr4_4:51574800-51574819 | None:intergenic | 60.0% |
| ! | TCCACCAGCTGGAGTGCCTT+CGG | - | chr4_4:51574810-51574829 | None:intergenic | 60.0% |
| !! | ATGGTTTTGCGGGGTGAGGG+TGG | - | chr4_4:51577103-51577122 | None:intergenic | 60.0% |
| GGATGGGGATGGGGATGGTG+GGG | - | chr4_4:51569739-51569758 | None:intergenic | 65.0% | |
| GGGATGGGGATGGGGATGGT+GGG | - | chr4_4:51569740-51569759 | None:intergenic | 65.0% | |
| AGGGATGGGGATGGGGATGG+TGG | - | chr4_4:51569741-51569760 | None:intergenic | 65.0% | |
| ! | CCACCAGCTGGAGTGCCTTC+GGG | - | chr4_4:51574809-51574828 | None:intergenic | 65.0% |
| !! | GAAGGCACTCCAGCTGGTGG+AGG | + | chr4_4:51574809-51574828 | Msa0686940:CDS | 65.0% |
| CACGGGACCGAAACCCTTGC+TGG | - | chr4_4:51577295-51577314 | None:intergenic | 65.0% | |
| CAGCAAGGGTTTCGGTCCCG+TGG | + | chr4_4:51577293-51577312 | Msa0686940:three_prime_UTR | 65.0% | |
| !! | GCTCCCGAAGGCACTCCAGC+TGG | + | chr4_4:51574803-51574822 | Msa0686940:CDS | 70.0% |
| !! | CCCGAAGGCACTCCAGCTGG+TGG | + | chr4_4:51574806-51574825 | Msa0686940:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 51569593 | 51577383 | 51569593 | ID=Msa0686940;Name=Msa0686940 |
| chr4_4 | mRNA | 51569593 | 51577383 | 51569593 | ID=Msa0686940-mRNA-1;Parent=Msa0686940;Name=Msa0686940-mRNA-1;_AED=0.15;_eAED=0.15;_QI=302|0.90|0.91|1|1|1|12|324|552 |
| chr4_4 | exon | 51569593 | 51570005 | 51569593 | ID=Msa0686940-mRNA-1:exon:13355;Parent=Msa0686940-mRNA-1 |
| chr4_4 | exon | 51570105 | 51570203 | 51570105 | ID=Msa0686940-mRNA-1:exon:13356;Parent=Msa0686940-mRNA-1 |
| chr4_4 | exon | 51570453 | 51570548 | 51570453 | ID=Msa0686940-mRNA-1:exon:13357;Parent=Msa0686940-mRNA-1 |
| chr4_4 | exon | 51570665 | 51570788 | 51570665 | ID=Msa0686940-mRNA-1:exon:13358;Parent=Msa0686940-mRNA-1 |
| chr4_4 | exon | 51571262 | 51571380 | 51571262 | ID=Msa0686940-mRNA-1:exon:13359;Parent=Msa0686940-mRNA-1 |
| chr4_4 | exon | 51571468 | 51571569 | 51571468 | ID=Msa0686940-mRNA-1:exon:13360;Parent=Msa0686940-mRNA-1 |
| chr4_4 | exon | 51573081 | 51573155 | 51573081 | ID=Msa0686940-mRNA-1:exon:13361;Parent=Msa0686940-mRNA-1 |
| chr4_4 | exon | 51574063 | 51574139 | 51574063 | ID=Msa0686940-mRNA-1:exon:13362;Parent=Msa0686940-mRNA-1 |
| chr4_4 | exon | 51574252 | 51574498 | 51574252 | ID=Msa0686940-mRNA-1:exon:13363;Parent=Msa0686940-mRNA-1 |
| chr4_4 | exon | 51574584 | 51574934 | 51574584 | ID=Msa0686940-mRNA-1:exon:13364;Parent=Msa0686940-mRNA-1 |
| chr4_4 | exon | 51575864 | 51575992 | 51575864 | ID=Msa0686940-mRNA-1:exon:13365;Parent=Msa0686940-mRNA-1 |
| chr4_4 | exon | 51576931 | 51577383 | 51576931 | ID=Msa0686940-mRNA-1:exon:13366;Parent=Msa0686940-mRNA-1 |
| chr4_4 | five_prime_UTR | 51569593 | 51569894 | 51569593 | ID=Msa0686940-mRNA-1:five_prime_utr;Parent=Msa0686940-mRNA-1 |
| chr4_4 | CDS | 51569895 | 51570005 | 51569895 | ID=Msa0686940-mRNA-1:cds;Parent=Msa0686940-mRNA-1 |
| chr4_4 | CDS | 51570105 | 51570203 | 51570105 | ID=Msa0686940-mRNA-1:cds;Parent=Msa0686940-mRNA-1 |
| chr4_4 | CDS | 51570453 | 51570548 | 51570453 | ID=Msa0686940-mRNA-1:cds;Parent=Msa0686940-mRNA-1 |
| chr4_4 | CDS | 51570665 | 51570788 | 51570665 | ID=Msa0686940-mRNA-1:cds;Parent=Msa0686940-mRNA-1 |
| chr4_4 | CDS | 51571262 | 51571380 | 51571262 | ID=Msa0686940-mRNA-1:cds;Parent=Msa0686940-mRNA-1 |
| chr4_4 | CDS | 51571468 | 51571569 | 51571468 | ID=Msa0686940-mRNA-1:cds;Parent=Msa0686940-mRNA-1 |
| chr4_4 | CDS | 51573081 | 51573155 | 51573081 | ID=Msa0686940-mRNA-1:cds;Parent=Msa0686940-mRNA-1 |
| chr4_4 | CDS | 51574063 | 51574139 | 51574063 | ID=Msa0686940-mRNA-1:cds;Parent=Msa0686940-mRNA-1 |
| chr4_4 | CDS | 51574252 | 51574498 | 51574252 | ID=Msa0686940-mRNA-1:cds;Parent=Msa0686940-mRNA-1 |
| chr4_4 | CDS | 51574584 | 51574934 | 51574584 | ID=Msa0686940-mRNA-1:cds;Parent=Msa0686940-mRNA-1 |
| chr4_4 | CDS | 51575864 | 51575992 | 51575864 | ID=Msa0686940-mRNA-1:cds;Parent=Msa0686940-mRNA-1 |
| chr4_4 | CDS | 51576931 | 51577059 | 51576931 | ID=Msa0686940-mRNA-1:cds;Parent=Msa0686940-mRNA-1 |
| chr4_4 | three_prime_UTR | 51577060 | 51577383 | 51577060 | ID=Msa0686940-mRNA-1:three_prime_utr;Parent=Msa0686940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
