Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0827510 | XP_003607198.1 | 96.920 | 552 | 2 | 1 | 1 | 552 | 1 | 537 | 0.0 | 1085 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0827510 | sp|Q9SKR2|SYT1_ARATH | 72.252 | 555 | 136 | 4 | 1 | 552 | 1 | 540 | 0.0 | 828 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0827510 | G7JNF4 | 96.920 | 552 | 2 | 1 | 1 | 552 | 1 | 537 | 0.0 | 1085 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0686940 | Msa0827510 | 0.997717 | 8.879180e-248 | -8.615850e-47 |
| Msa0827510 | Msa1339200 | 0.837795 | 4.210803e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0827510 | MtrunA17_Chr1g0156811 | 71.014 | 552 | 141 | 3 | 1 | 551 | 1 | 534 | 0.0 | 812 |
| Msa0827510 | MtrunA17_Chr4g0037111 | 95.714 | 350 | 0 | 1 | 1 | 350 | 1 | 335 | 0.0 | 674 |
| Msa0827510 | MtrunA17_Chr1g0199571 | 53.750 | 560 | 235 | 4 | 1 | 552 | 1 | 544 | 0.0 | 582 |
| Msa0827510 | MtrunA17_Chr4g0037121 | 98.980 | 196 | 2 | 0 | 357 | 552 | 1 | 196 | 2.46e-139 | 401 |
| Msa0827510 | MtrunA17_Chr4g0064531 | 30.444 | 496 | 306 | 11 | 85 | 549 | 70 | 557 | 2.52e-65 | 222 |
| Msa0827510 | MtrunA17_Chr7g0246311 | 31.116 | 421 | 253 | 12 | 1 | 410 | 1 | 395 | 2.11e-60 | 208 |
| Msa0827510 | MtrunA17_Chr8g0351231 | 30.254 | 433 | 264 | 12 | 1 | 421 | 1 | 407 | 9.59e-55 | 192 |
| Msa0827510 | MtrunA17_Chr4g0037181 | 82.883 | 111 | 14 | 1 | 357 | 467 | 1 | 106 | 3.80e-54 | 180 |
| Msa0827510 | MtrunA17_Chr4g0037181 | 62.712 | 59 | 8 | 2 | 84 | 142 | 105 | 149 | 1.45e-12 | 65.9 |
| Msa0827510 | MtrunA17_Chr3g0137471 | 27.103 | 535 | 303 | 15 | 86 | 549 | 64 | 582 | 1.19e-49 | 180 |
| Msa0827510 | MtrunA17_Chr7g0249671 | 70.000 | 80 | 21 | 3 | 471 | 548 | 2 | 80 | 1.78e-24 | 97.1 |
| Msa0827510 | MtrunA17_Chr2g0313621 | 25.175 | 286 | 184 | 10 | 86 | 347 | 76 | 355 | 1.31e-14 | 77.0 |
| Msa0827510 | MtrunA17_Chr6g0478401 | 44.944 | 89 | 44 | 3 | 270 | 358 | 13 | 96 | 1.30e-12 | 66.2 |
| Msa0827510 | MtrunA17_Chr3g0111361 | 41.573 | 89 | 47 | 3 | 270 | 358 | 1 | 84 | 2.06e-11 | 62.8 |
| Msa0827510 | MtrunA17_Chr2g0280981 | 40.000 | 85 | 46 | 3 | 274 | 358 | 4 | 83 | 7.15e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0827510 | AT2G20990.1 | 72.252 | 555 | 136 | 4 | 1 | 552 | 1 | 540 | 0.0 | 828 |
| Msa0827510 | AT1G20080.2 | 70.109 | 552 | 149 | 2 | 1 | 552 | 1 | 536 | 0.0 | 820 |
| Msa0827510 | AT1G20080.3 | 70.109 | 552 | 149 | 2 | 1 | 552 | 1 | 536 | 0.0 | 820 |
| Msa0827510 | AT1G20080.4 | 70.109 | 552 | 149 | 2 | 1 | 552 | 1 | 536 | 0.0 | 820 |
| Msa0827510 | AT1G20080.1 | 70.109 | 552 | 149 | 2 | 1 | 552 | 1 | 536 | 0.0 | 820 |
| Msa0827510 | AT1G20080.5 | 70.109 | 552 | 149 | 2 | 1 | 552 | 1 | 536 | 0.0 | 820 |
| Msa0827510 | AT2G20990.2 | 69.257 | 579 | 136 | 5 | 1 | 552 | 1 | 564 | 0.0 | 814 |
| Msa0827510 | AT2G20990.3 | 67.622 | 593 | 136 | 5 | 1 | 552 | 1 | 578 | 0.0 | 811 |
| Msa0827510 | AT5G04220.2 | 52.072 | 555 | 248 | 4 | 1 | 552 | 1 | 540 | 0.0 | 576 |
| Msa0827510 | AT5G04220.3 | 52.941 | 493 | 214 | 4 | 63 | 552 | 1 | 478 | 0.0 | 526 |
| Msa0827510 | AT2G21010.1 | 62.977 | 262 | 88 | 3 | 293 | 552 | 1 | 255 | 1.88e-114 | 340 |
| Msa0827510 | AT5G04220.1 | 51.266 | 316 | 151 | 3 | 240 | 552 | 3 | 318 | 8.61e-102 | 310 |
| Msa0827510 | AT1G05500.1 | 29.825 | 570 | 350 | 11 | 11 | 549 | 1 | 551 | 1.39e-71 | 239 |
| Msa0827510 | AT3G61050.2 | 30.093 | 432 | 265 | 11 | 1 | 421 | 1 | 406 | 2.88e-56 | 197 |
| Msa0827510 | AT3G61050.1 | 30.093 | 432 | 265 | 11 | 1 | 421 | 1 | 406 | 2.88e-56 | 197 |
| Msa0827510 | AT1G05500.2 | 29.736 | 417 | 255 | 8 | 161 | 549 | 1 | 407 | 1.72e-50 | 179 |
| Msa0827510 | AT2G21040.1 | 62.921 | 89 | 33 | 0 | 419 | 507 | 2 | 90 | 4.00e-34 | 130 |
| Msa0827510 | AT3G60950.1 | 28.859 | 298 | 164 | 11 | 86 | 381 | 39 | 290 | 2.00e-22 | 101 |
| Msa0827510 | AT3G61030.1 | 27.852 | 298 | 160 | 10 | 86 | 381 | 39 | 283 | 8.34e-20 | 93.2 |
| Msa0827510 | AT1G48590.4 | 43.820 | 89 | 45 | 3 | 270 | 358 | 6 | 89 | 1.24e-13 | 69.7 |
| Msa0827510 | AT1G48590.1 | 43.820 | 89 | 45 | 3 | 270 | 358 | 6 | 89 | 1.24e-13 | 69.7 |
| Msa0827510 | AT1G48590.2 | 43.820 | 89 | 45 | 3 | 270 | 358 | 37 | 120 | 1.72e-13 | 70.1 |
| Msa0827510 | AT1G53590.1 | 26.374 | 273 | 165 | 10 | 86 | 331 | 72 | 335 | 2.35e-13 | 73.6 |
| Msa0827510 | AT5G47710.1 | 42.708 | 96 | 50 | 3 | 270 | 365 | 1 | 91 | 3.10e-13 | 68.2 |
| Msa0827510 | AT5G47710.2 | 42.708 | 96 | 50 | 3 | 270 | 365 | 1 | 91 | 3.10e-13 | 68.2 |
| Msa0827510 | AT5G47710.3 | 42.708 | 96 | 50 | 3 | 270 | 365 | 1 | 91 | 3.10e-13 | 68.2 |
| Msa0827510 | AT5G47710.4 | 42.708 | 96 | 50 | 3 | 270 | 365 | 1 | 91 | 3.10e-13 | 68.2 |
| Msa0827510 | AT3G14590.2 | 25.484 | 310 | 192 | 12 | 86 | 366 | 72 | 371 | 4.61e-13 | 72.4 |
| Msa0827510 | AT3G14590.3 | 25.484 | 310 | 192 | 12 | 86 | 366 | 41 | 340 | 5.02e-13 | 72.4 |
| Msa0827510 | AT3G14590.1 | 25.484 | 310 | 192 | 12 | 86 | 366 | 27 | 326 | 5.26e-13 | 72.4 |
| Msa0827510 | AT3G61300.1 | 27.509 | 269 | 168 | 10 | 273 | 531 | 247 | 498 | 1.18e-12 | 71.2 |
| Msa0827510 | AT1G50260.1 | 23.513 | 353 | 234 | 14 | 85 | 410 | 191 | 534 | 3.93e-12 | 69.3 |
| Msa0827510 | AT1G70810.1 | 39.583 | 96 | 53 | 3 | 270 | 365 | 1 | 91 | 1.11e-11 | 63.9 |
| Msa0827510 | AT2G01540.1 | 38.636 | 88 | 49 | 3 | 271 | 358 | 3 | 85 | 1.58e-11 | 63.9 |
| Msa0827510 | AT3G17980.1 | 41.176 | 85 | 45 | 3 | 274 | 358 | 17 | 96 | 3.75e-11 | 62.8 |
| Msa0827510 | AT1G73580.1 | 36.429 | 140 | 69 | 6 | 270 | 403 | 4 | 129 | 7.16e-11 | 61.6 |
Find 167 sgRNAs with CRISPR-Local
Find 505 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCCATCTCCTCTTCATTTA+AGG | 0.082315 | 5_3:-68814151 | None:intergenic |
| TGGAATCTGCTCTTCAATTA+TGG | 0.144763 | 5_3:-68810102 | None:intergenic |
| TTATGGAGCCTTCTATAAAA+TGG | 0.186283 | 5_3:+68810701 | Msa0827510:CDS |
| ACCATTGCTGTTAAGGCATT+TGG | 0.186930 | 5_3:+68810742 | Msa0827510:CDS |
| TGTACTGAAGAAACCCATTT+TGG | 0.193252 | 5_3:-68809293 | None:intergenic |
| CACTTAGATCCATTCCAAAA+TGG | 0.203755 | 5_3:+68809279 | Msa0827510:exon |
| CCCATCTCCTCTTCATTTAA+GGG | 0.224515 | 5_3:-68814150 | None:intergenic |
| CCTCAACATCTTGAGCTTCA+TGG | 0.244110 | 5_3:-68814254 | None:intergenic |
| GTTAAAGAAGAAAGATCTTC+TGG | 0.245042 | 5_3:+68813710 | Msa0827510:CDS |
| CTAAAACGTTTAGGTTCTTC+AGG | 0.245789 | 5_3:-68814042 | None:intergenic |
| AGGGATGGGGATGGGGATGG+TGG | 0.257830 | 5_3:-68809141 | None:intergenic |
| ATGGAATGAAGAATTTAATT+TGG | 0.277673 | 5_3:+68813824 | Msa0827510:CDS |
| GGAATCTGCTCTTCAATTAT+GGG | 0.285493 | 5_3:-68810101 | None:intergenic |
| GACTTTGGGCTAAAGCTTCT+AGG | 0.286163 | 5_3:+68812494 | Msa0827510:CDS |
| CCATCCCCATCCCTAGATTT+AGG | 0.288816 | 5_3:+68809150 | Msa0827510:five_prime_UTR |
| TCCACCAGCTGGAGTGCCTT+CGG | 0.297237 | 5_3:-68814211 | None:intergenic |
| TTAAATTCTTCATTCCATTC+AGG | 0.303352 | 5_3:-68813819 | None:intergenic |
| CCATTGCTGTTAAGGCATTT+GGG | 0.308327 | 5_3:+68810743 | Msa0827510:CDS |
| AGCTGTAAAACCTGGGTCTC+TGG | 0.315296 | 5_3:-68813858 | None:intergenic |
| TATCTAATATTTGAACTTCC+AGG | 0.317043 | 5_3:-68813514 | None:intergenic |
| CTTTCCTTATTAGGAATCAC+TGG | 0.318237 | 5_3:+68816322 | Msa0827510:intron |
| CAATGTCACCATTGCTGTTA+AGG | 0.325081 | 5_3:+68810735 | Msa0827510:CDS |
| TCATCGTCTTGGTCCACTAT+TGG | 0.325815 | 5_3:-68809523 | None:intergenic |
| GGATGGGGATGGGGATGGTG+GGG | 0.334435 | 5_3:-68809139 | None:intergenic |
| TGCTTCCTGAGATTCCAAAT+TGG | 0.339865 | 5_3:+68809560 | Msa0827510:CDS |
| AATGGTGACATTGGGATTTC+CGG | 0.341259 | 5_3:-68810725 | None:intergenic |
| GAGGCTCCTCTGCTATAAAT+TGG | 0.349999 | 5_3:-68815309 | None:intergenic |
| CCACCAGCTGGAGTGCCTTC+GGG | 0.353731 | 5_3:-68814210 | None:intergenic |
| GGAGTGCCTTCGGGAGCTTT+AGG | 0.360023 | 5_3:-68814201 | None:intergenic |
| TCGCATTACATTGAAGCCTT+TGG | 0.361595 | 5_3:+68810901 | Msa0827510:CDS |
| TGATGAGAAGGAGTTGATTA+TGG | 0.372111 | 5_3:+68810684 | Msa0827510:CDS |
| AGGTCCAGACTAAAACGTTT+AGG | 0.372756 | 5_3:-68814051 | None:intergenic |
| TGGAACTCATCTTCCCATCT+TGG | 0.380983 | 5_3:-68815289 | None:intergenic |
| TTAATCCAATTTGGAATCTC+AGG | 0.390421 | 5_3:-68809565 | None:intergenic |
| TGGTGTCTACAGGATTGTTC+AGG | 0.391879 | 5_3:+68812538 | Msa0827510:CDS |
| ACTTAGATCCATTCCAAAAT+GGG | 0.392659 | 5_3:+68809280 | Msa0827510:exon |
| ATCAACAAACCTTGAAAAGT+TGG | 0.399135 | 5_3:-68810179 | None:intergenic |
| GCTGATCTTATGTCTATTCC+TGG | 0.399296 | 5_3:+68812518 | Msa0827510:CDS |
| TTTGGTGTTGGAATTTCAAT+TGG | 0.403525 | 5_3:+68809334 | Msa0827510:CDS |
| AGGTGTAACAGAAAATGATT+AGG | 0.403951 | 5_3:-68809191 | None:intergenic |
| TTAATGATGAATACTTTATG+AGG | 0.404880 | 5_3:+68809029 | Msa0827510:five_prime_UTR |
| ACTTTGGGCTAAAGCTTCTA+GGG | 0.405305 | 5_3:+68812495 | Msa0827510:CDS |
| GGGATGGGGATGGGGATGGT+GGG | 0.406758 | 5_3:-68809140 | None:intergenic |
| GGTGATGTTGTCCTAAATCT+AGG | 0.408735 | 5_3:-68809161 | None:intergenic |
| CTCCACATGTAGTTTATCAT+TGG | 0.409415 | 5_3:-68815335 | None:intergenic |
| GGAAGTTCAAATATTAGATA+TGG | 0.410316 | 5_3:+68813517 | Msa0827510:CDS |
| TAAATCTAGGGATGGGGATG+GGG | 0.411881 | 5_3:-68809148 | None:intergenic |
| CACGGGACCGAAACCCTTGC+TGG | 0.423799 | 5_3:-68816696 | None:intergenic |
| TGTCTATTCCTGGTGTCTAC+AGG | 0.425149 | 5_3:+68812528 | Msa0827510:CDS |
| CCAGGAGCTTATCAAAGATC+AGG | 0.425584 | 5_3:+68813463 | Msa0827510:intron |
| GTGCAGCCACATGTTGACTT+TGG | 0.426065 | 5_3:+68812479 | Msa0827510:intron |
| ATTTCAATTGGTCTCGTTGT+TGG | 0.427047 | 5_3:+68809346 | Msa0827510:CDS |
| CTAAATCTAGGGATGGGGAT+GGG | 0.432721 | 5_3:-68809149 | None:intergenic |
| GGTGTAACAGAAAATGATTA+GGG | 0.435050 | 5_3:-68809190 | None:intergenic |
| TCAACAAACCTTGAAAAGTT+GGG | 0.435324 | 5_3:-68810178 | None:intergenic |
| ATATATACCAGCAAGGGTTT+CGG | 0.438708 | 5_3:+68816689 | Msa0827510:three_prime_UTR |
| TTTGCAAAGTTTCATCGTCT+TGG | 0.441142 | 5_3:-68809534 | None:intergenic |
| TACAGCTCAATGTTTATGAC+TGG | 0.443325 | 5_3:+68813874 | Msa0827510:CDS |
| TATGTGGCCTTATCTTGATA+AGG | 0.443807 | 5_3:+68809930 | Msa0827510:CDS |
| TCCTAAAATTACGCCAATAG+TGG | 0.445532 | 5_3:+68809510 | Msa0827510:CDS |
| TGCAGCCACATGTTGACTTT+GGG | 0.447473 | 5_3:+68812480 | Msa0827510:intron |
| TTCTCCACTGCAACTCTACC+TGG | 0.452380 | 5_3:-68816433 | None:intergenic |
| TGGGTTGAAAGCAACCGTTC+AGG | 0.454217 | 5_3:+68810762 | Msa0827510:CDS |
| TTTACATGTAAAATTCCAAC+GGG | 0.457448 | 5_3:-68813669 | None:intergenic |
| GAGTTTCAGACGCTCACTCT+CGG | 0.463988 | 5_3:+68810146 | Msa0827510:CDS |
| TAATTTACCCTATCAAAGTC+AGG | 0.465817 | 5_3:-68809592 | None:intergenic |
| ACCCTTAAATGAAGAGGAGA+TGG | 0.469354 | 5_3:+68814149 | Msa0827510:CDS |
| CTTAACAGCAATGGTGACAT+TGG | 0.478386 | 5_3:-68810734 | None:intergenic |
| CTATGTCGCTCTCATGGAAA+AGG | 0.478673 | 5_3:+68810952 | Msa0827510:CDS |
| GATCTAAGTGATTTCAGATC+GGG | 0.481855 | 5_3:-68809266 | None:intergenic |
| TTAACAGCAATGGTGACATT+GGG | 0.483816 | 5_3:-68810733 | None:intergenic |
| GGTTGGGAAGCATGACAAGA+TGG | 0.484765 | 5_3:+68813987 | Msa0827510:intron |
| TATGGAGCCTTCTATAAAAT+GGG | 0.488425 | 5_3:+68810702 | Msa0827510:CDS |
| CATCTTATAGATTCTAAGAA+TGG | 0.489619 | 5_3:+68816404 | Msa0827510:CDS |
| AGTTTCAGACGCTCACTCTC+GGG | 0.489815 | 5_3:+68810147 | Msa0827510:CDS |
| TTGGCAAAGCAAGGAAAGCT+TGG | 0.490618 | 5_3:-68810926 | None:intergenic |
| CAACATACCTTATCAAGATA+AGG | 0.492149 | 5_3:-68809937 | None:intergenic |
| GGTTATGTCGACATCAATCT+CGG | 0.493324 | 5_3:+68816344 | Msa0827510:CDS |
| TTAAAGAAGAAAGATCTTCT+GGG | 0.496144 | 5_3:+68813711 | Msa0827510:CDS |
| GAATCAGAAGTACATATGTA+TGG | 0.496829 | 5_3:-68816482 | None:intergenic |
| TCTAGGGATGGGGATGGGGA+TGG | 0.496849 | 5_3:-68809144 | None:intergenic |
| GCTGTAAAACCTGGGTCTCT+GGG | 0.497195 | 5_3:-68813857 | None:intergenic |
| TAAAACGTTTAGGTTCTTCA+GGG | 0.505411 | 5_3:-68814041 | None:intergenic |
| ACAAGTTTATAGAACTTATG+TGG | 0.506312 | 5_3:+68809914 | Msa0827510:CDS |
| AAACATTGAGCTGTAAAACC+TGG | 0.513710 | 5_3:-68813866 | None:intergenic |
| AAAAGAACAGAGATCCAAGA+TGG | 0.515166 | 5_3:+68815275 | Msa0827510:CDS |
| GTAAGCTTTAGTTTCACGTA+AGG | 0.517833 | 5_3:-68813744 | None:intergenic |
| GGAGACTAAAATTTAAGAGA+TGG | 0.520852 | 5_3:-68816523 | None:intergenic |
| GTTGTCCTAAATCTAGGGAT+GGG | 0.521281 | 5_3:-68809155 | None:intergenic |
| ACAAGTTGACCTCCACCAGC+TGG | 0.524770 | 5_3:-68814222 | None:intergenic |
| CAACATCTATGTCGCTCTCA+TGG | 0.531738 | 5_3:+68810946 | Msa0827510:CDS |
| GAATGAATGAATGAAACGGC+TGG | 0.531874 | 5_3:-68809108 | None:intergenic |
| TTCTAAGAATGGTCGCATCC+AGG | 0.534118 | 5_3:+68816415 | Msa0827510:CDS |
| GCTCCCGAAGGCACTCCAGC+TGG | 0.535017 | 5_3:+68814207 | Msa0827510:CDS |
| GTTATGTCGACATCAATCTC+GGG | 0.535331 | 5_3:+68816345 | Msa0827510:CDS |
| CATGAGAGCGACATAGATGT+TGG | 0.539276 | 5_3:-68810945 | None:intergenic |
| CAAGGAAAGCTTGGAACCAA+AGG | 0.539777 | 5_3:-68810917 | None:intergenic |
| ACAAGAACTTAAATCCTGAA+TGG | 0.542041 | 5_3:+68813805 | Msa0827510:CDS |
| CCCGAAGGCACTCCAGCTGG+TGG | 0.542115 | 5_3:+68814210 | Msa0827510:CDS |
| CATGAAGCTCAAGATGTTGA+GGG | 0.543113 | 5_3:+68814255 | Msa0827510:CDS |
| CGAAGAAAGCAAAGTATCGA+TGG | 0.543706 | 5_3:-68809060 | None:intergenic |
| CCATGAAGCTCAAGATGTTG+AGG | 0.550519 | 5_3:+68814254 | Msa0827510:CDS |
| ACAGCTCAATGTTTATGACT+GGG | 0.553354 | 5_3:+68813875 | Msa0827510:CDS |
| ATTTGGATATATACCAGCAA+GGG | 0.555762 | 5_3:+68816683 | Msa0827510:three_prime_UTR |
| TGAAGAATGAATGAATGAAA+CGG | 0.557768 | 5_3:-68809112 | None:intergenic |
| CTTTCAACCTACAGATGTTG+AGG | 0.558020 | 5_3:+68809387 | Msa0827510:CDS |
| TGAGTTCCAATTTATAGCAG+AGG | 0.560485 | 5_3:+68815303 | Msa0827510:CDS |
| TTTCCTTATTAGGAATCACT+GGG | 0.560765 | 5_3:+68816323 | Msa0827510:intron |
| ACATAGATGTTGGCAAAGCA+AGG | 0.563378 | 5_3:-68810935 | None:intergenic |
| CAACAAACCTTGAAAAGTTG+GGG | 0.565270 | 5_3:-68810177 | None:intergenic |
| GAAGGCACTCCAGCTGGTGG+AGG | 0.565743 | 5_3:+68814213 | Msa0827510:CDS |
| CTTTACATGTAAAATTCCAA+CGG | 0.567784 | 5_3:-68813670 | None:intergenic |
| TCATATCATAGTAGTAGTAA+TGG | 0.569787 | 5_3:+68809228 | Msa0827510:five_prime_UTR |
| TACCAATGATAAACTACATG+TGG | 0.571745 | 5_3:+68815333 | Msa0827510:CDS |
| CTGAAAATAAGACGTGCTTG+TGG | 0.573459 | 5_3:-68814294 | None:intergenic |
| TTATAAACCCTTAAATGAAG+AGG | 0.574026 | 5_3:+68814143 | Msa0827510:CDS |
| CCCAAATGCCTTAACAGCAA+TGG | 0.574272 | 5_3:-68810743 | None:intergenic |
| GAGCCTTCTATAAAATGGGC+CGG | 0.574886 | 5_3:+68810706 | Msa0827510:CDS |
| CAGCAAGGGTTTCGGTCCCG+TGG | 0.575434 | 5_3:+68816697 | Msa0827510:three_prime_UTR |
| CCCTTAAATGAAGAGGAGAT+GGG | 0.578046 | 5_3:+68814150 | Msa0827510:CDS |
| TTGTCCTAAATCTAGGGATG+GGG | 0.580024 | 5_3:-68809154 | None:intergenic |
| GGATCTAAGTGATTTCAGAT+CGG | 0.580195 | 5_3:-68809267 | None:intergenic |
| CAATGTTTATGACTGGGAGC+AGG | 0.580843 | 5_3:+68813881 | Msa0827510:CDS |
| ACGAACCTTGCTTCATCAGA+AGG | 0.580909 | 5_3:+68815375 | Msa0827510:CDS |
| ATGATTACCTCAACATCTGT+AGG | 0.580981 | 5_3:-68809394 | None:intergenic |
| CATTCTTAGAATCTATAAGA+TGG | 0.583722 | 5_3:-68816403 | None:intergenic |
| TTGGGAATCTTAGAGCTATG+AGG | 0.585506 | 5_3:+68813643 | Msa0827510:intron |
| CTTTGGGCTAAAGCTTCTAG+GGG | 0.586412 | 5_3:+68812496 | Msa0827510:CDS |
| GTTGGGAAGCATGACAAGAT+GGG | 0.586514 | 5_3:+68813988 | Msa0827510:CDS |
| TGTTGTCCTAAATCTAGGGA+TGG | 0.587303 | 5_3:-68809156 | None:intergenic |
| GTGTAACGAAAACAGTGAGA+AGG | 0.589516 | 5_3:+68816551 | Msa0827510:three_prime_UTR |
| AAGTACCTTCTGATGAAGCA+AGG | 0.591243 | 5_3:-68815380 | None:intergenic |
| AACATTGAGCTGTAAAACCT+GGG | 0.596132 | 5_3:-68813865 | None:intergenic |
| TGTAACGAAAACAGTGAGAA+GGG | 0.597167 | 5_3:+68816552 | Msa0827510:three_prime_UTR |
| AAATGAAGAGGAGATGGGCA+AGG | 0.600205 | 5_3:+68814155 | Msa0827510:CDS |
| AGTCAAAGACCCAGAGACCC+AGG | 0.601172 | 5_3:+68813848 | Msa0827510:CDS |
| TAGAACAGAATATTTATCCA+CGG | 0.604446 | 5_3:-68816714 | None:intergenic |
| AGAACAGAATATTTATCCAC+GGG | 0.606822 | 5_3:-68816713 | None:intergenic |
| AATGAAGAGGAGATGGGCAA+GGG | 0.610144 | 5_3:+68814156 | Msa0827510:CDS |
| ACATGTAGTTTATCATTGGT+AGG | 0.611492 | 5_3:-68815331 | None:intergenic |
| CCTAAATCTAGGGATGGGGA+TGG | 0.612581 | 5_3:-68809150 | None:intergenic |
| CAACAAAGTTGTTACCTGAA+CGG | 0.614430 | 5_3:-68810776 | None:intergenic |
| TGTAGTTTATCATTGGTAGG+AGG | 0.614487 | 5_3:-68815328 | None:intergenic |
| GATTTGGATATATACCAGCA+AGG | 0.615454 | 5_3:+68816682 | Msa0827510:three_prime_UTR |
| CAATGATAAACTACATGTGG+AGG | 0.618426 | 5_3:+68815336 | Msa0827510:CDS |
| AAAACGTTTAGGTTCTTCAG+GGG | 0.621049 | 5_3:-68814040 | None:intergenic |
| GCATCCAGGTAGAGTTGCAG+TGG | 0.621739 | 5_3:+68816429 | Msa0827510:CDS |
| AGTTTATGTGACTGATGAGA+AGG | 0.622742 | 5_3:+68810672 | Msa0827510:CDS |
| GTGATGTTGTCCTAAATCTA+GGG | 0.623219 | 5_3:-68809160 | None:intergenic |
| AAAGAACAGAGATCCAAGAT+GGG | 0.625196 | 5_3:+68815276 | Msa0827510:CDS |
| ATCGCGAGGACAGATTGTTG+TGG | 0.631945 | 5_3:+68814113 | Msa0827510:CDS |
| AGAGCTATGAGGAGACCCGT+TGG | 0.633398 | 5_3:+68813654 | Msa0827510:intron |
| ATATGATACGACGAAGGTGA+AGG | 0.636471 | 5_3:-68809211 | None:intergenic |
| CTGATGAAGCAAGGTTCGTG+AGG | 0.636887 | 5_3:-68815371 | None:intergenic |
| TGTAACAGAAAATGATTAGG+GGG | 0.642075 | 5_3:-68809188 | None:intergenic |
| AGGTTGCAAACATGTATCTG+TGG | 0.648677 | 5_3:+68813483 | Msa0827510:CDS |
| AAAGGCTTCAATGTAATGCG+AGG | 0.652346 | 5_3:-68810899 | None:intergenic |
| GGAGAACTGCATAAGCATGA+TGG | 0.658709 | 5_3:+68816450 | Msa0827510:exon |
| TGAACAATCCTGTAGACACC+AGG | 0.661769 | 5_3:-68812536 | None:intergenic |
| ATGAAGCTCAAGATGTTGAG+GGG | 0.672133 | 5_3:+68814256 | Msa0827510:CDS |
| TTTAGCCCAAAGTCAACATG+TGG | 0.676209 | 5_3:-68812485 | None:intergenic |
| TTATGTCGACATCAATCTCG+GGG | 0.683350 | 5_3:+68816346 | Msa0827510:CDS |
| GCTCAAAATGAGAAATCGCG+AGG | 0.690879 | 5_3:+68814099 | Msa0827510:CDS |
| GTGTAACAGAAAATGATTAG+GGG | 0.694947 | 5_3:-68809189 | None:intergenic |
| AACAAACCTTGAAAAGTTGG+GGG | 0.698689 | 5_3:-68810176 | None:intergenic |
| ACAATTCCTAAAGCTCCCGA+AGG | 0.699450 | 5_3:+68814195 | Msa0827510:CDS |
| ACTATGATATGATACGACGA+AGG | 0.741345 | 5_3:-68809217 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTCTAAATTAATATTC+AGG | + | chr5_3:68813556-68813575 | Msa0827510:intron | 10.0% |
| !!! | ACAGAATCAATTTTATATTT+TGG | - | chr5_3:68810125-68810144 | None:intergenic | 15.0% |
| !!! | AGTTTGTTCAAATTATAAAT+GGG | - | chr5_3:68810407-68810426 | None:intergenic | 15.0% |
| !!! | AAGTTTGTTCAAATTATAAA+TGG | - | chr5_3:68810408-68810427 | None:intergenic | 15.0% |
| !!! | ATTAAGCAATTTTTATAAGA+AGG | - | chr5_3:68811531-68811550 | None:intergenic | 15.0% |
| !! | TGTTAAACTATTAATAAGAA+AGG | - | chr5_3:68811906-68811925 | None:intergenic | 15.0% |
| !!! | AAAATTTGTTTTAACTTTAC+TGG | + | chr5_3:68811981-68812000 | Msa0827510:intron | 15.0% |
| !!! | TTATTTTGAATGTGTAATAA+AGG | + | chr5_3:68812405-68812424 | Msa0827510:intron | 15.0% |
| !! | AATTAATATTCAGGATATAA+TGG | + | chr5_3:68813565-68813584 | Msa0827510:intron | 15.0% |
| !! | GAATACTATAAGTTAAAATA+AGG | + | chr5_3:68815993-68816012 | Msa0827510:intron | 15.0% |
| !!! | ATAAGTTAAAATAAGGATTT+TGG | + | chr5_3:68816000-68816019 | Msa0827510:intron | 15.0% |
| !!! | AGAATATATTTGTTTTGATT+TGG | + | chr5_3:68816666-68816685 | Msa0827510:three_prime_UTR | 15.0% |
| !!! | CTTATTCACATTTTTTTTTT+AGG | + | chr5_3:68816737-68816756 | Msa0827510:three_prime_UTR | 15.0% |
| !! | TTAATGATGAATACTTTATG+AGG | + | chr5_3:68809029-68809048 | Msa0827510:five_prime_UTR | 20.0% |
| !!! | AGTACAATTTTTGGTTTTTT+CGG | + | chr5_3:68809310-68809329 | Msa0827510:CDS | 20.0% |
| !!! | GAGTTTTTTGTTTTTGATTT+TGG | + | chr5_3:68809480-68809499 | Msa0827510:intron | 20.0% |
| !!! | TATGGTACATTTCTATTTTT+AGG | + | chr5_3:68809813-68809832 | Msa0827510:intron | 20.0% |
| !!! | TATTTTTAGGTTTTGAGTTT+TGG | + | chr5_3:68809826-68809845 | Msa0827510:intron | 20.0% |
| !!! | TGAAATATTGTTTTTGTTTG+TGG | + | chr5_3:68809867-68809886 | Msa0827510:CDS | 20.0% |
| !!! | TGTTTTTTGTTTTGATGTTT+AGG | + | chr5_3:68810046-68810065 | Msa0827510:intron | 20.0% |
| !! | AACAAAAAATACCAAAAAGA+GGG | - | chr5_3:68810460-68810479 | None:intergenic | 20.0% |
| !! | TAACAAAAAATACCAAAAAG+AGG | - | chr5_3:68810461-68810480 | None:intergenic | 20.0% |
| !! | ATATGTTATCAAGACAAAAA+TGG | - | chr5_3:68810598-68810617 | None:intergenic | 20.0% |
| !! | CTAAAATATATGTAATTTCC+AGG | + | chr5_3:68810850-68810869 | Msa0827510:intron | 20.0% |
| !!! | TTTTTACCTTTTAGGAATTA+AGG | + | chr5_3:68811658-68811677 | Msa0827510:intron | 20.0% |
| !!! | TGCGTTTTTGTTTTTTATTT+TGG | + | chr5_3:68812213-68812232 | Msa0827510:intron | 20.0% |
| !!! | GCGTTTTTGTTTTTTATTTT+GGG | + | chr5_3:68812214-68812233 | Msa0827510:intron | 20.0% |
| !! | CAAGTAGCAAATTATAAAAA+GGG | - | chr5_3:68812382-68812401 | None:intergenic | 20.0% |
| !! | TCAAGTAGCAAATTATAAAA+AGG | - | chr5_3:68812383-68812402 | None:intergenic | 20.0% |
| !! | GAAGAGTAATATATGTTTAA+TGG | - | chr5_3:68813354-68813373 | None:intergenic | 20.0% |
| !!! | CACACTTTAAATTAGTTTAA+TGG | - | chr5_3:68813440-68813459 | None:intergenic | 20.0% |
| !!! | TTTTTCTTGTGAATGTTATT+GGG | + | chr5_3:68813625-68813644 | Msa0827510:intron | 20.0% |
| !! | ATGGAATGAAGAATTTAATT+TGG | + | chr5_3:68813824-68813843 | Msa0827510:CDS | 20.0% |
| !! | CTTTAATAAGGAGAATAAAT+TGG | + | chr5_3:68814915-68814934 | Msa0827510:intron | 20.0% |
| !!! | TAACATAGTTTTGATTCATA+TGG | + | chr5_3:68815044-68815063 | Msa0827510:intron | 20.0% |
| !!! | TATTCTTGTTCTTTTAACTT+TGG | + | chr5_3:68815600-68815619 | Msa0827510:intron | 20.0% |
| !!! | ATTCTTGTTCTTTTAACTTT+GGG | + | chr5_3:68815601-68815620 | Msa0827510:intron | 20.0% |
| !! | ATGCTATATATTTAACACAT+AGG | + | chr5_3:68815771-68815790 | Msa0827510:intron | 20.0% |
| !! | TGCTATATATTTAACACATA+GGG | + | chr5_3:68815772-68815791 | Msa0827510:intron | 20.0% |
| !!! | ACATATTTACTTTCTAAAGA+AGG | - | chr5_3:68815877-68815896 | None:intergenic | 20.0% |
| !!! | ATTAAGACGGAATTTTAAAT+TGG | - | chr5_3:68815913-68815932 | None:intergenic | 20.0% |
| !! | GAGTTCAAAATCATATATTA+AGG | - | chr5_3:68815958-68815977 | None:intergenic | 20.0% |
| !!! | TTTTAACTTATAGTATTCCT+TGG | - | chr5_3:68815991-68816010 | None:intergenic | 20.0% |
| !!! | GATATAAAAGGAACTTTTTA+AGG | - | chr5_3:68816179-68816198 | None:intergenic | 20.0% |
| ! | TGAAGAATGAATGAATGAAA+CGG | - | chr5_3:68809115-68809134 | None:intergenic | 25.0% |
| ! | TCATATCATAGTAGTAGTAA+TGG | + | chr5_3:68809228-68809247 | Msa0827510:five_prime_UTR | 25.0% |
| !!! | ATTTTTGGTTTTTTCGGATT+TGG | + | chr5_3:68809316-68809335 | Msa0827510:CDS | 25.0% |
| !!! | TTTGTTTTTGATTTTGGAAC+AGG | + | chr5_3:68809486-68809505 | Msa0827510:intron | 25.0% |
| !! | TCAGGATTTTTAATCCAATT+TGG | - | chr5_3:68809577-68809596 | None:intergenic | 25.0% |
| ! | TTAAAAATCCTGACTTTGAT+AGG | + | chr5_3:68809584-68809603 | Msa0827510:CDS | 25.0% |
| ! | TAAAAATCCTGACTTTGATA+GGG | + | chr5_3:68809585-68809604 | Msa0827510:CDS | 25.0% |
| !! | TTATTTTCTCAAACTATCTC+CGG | - | chr5_3:68809701-68809720 | None:intergenic | 25.0% |
| ! | ACAAGTTTATAGAACTTATG+TGG | + | chr5_3:68809914-68809933 | Msa0827510:CDS | 25.0% |
| ! | ACTTATTTCACTGTTTGTAA+AGG | + | chr5_3:68810288-68810307 | Msa0827510:intron | 25.0% |
| ! | CTTATTTCACTGTTTGTAAA+GGG | + | chr5_3:68810289-68810308 | Msa0827510:intron | 25.0% |
| ! | TTGTGTATAAAATAGCAAAG+CGG | - | chr5_3:68810572-68810591 | None:intergenic | 25.0% |
| !!! | ACAAAGGAATATTTTCTAGT+TGG | + | chr5_3:68811140-68811159 | Msa0827510:intron | 25.0% |
| !!! | ACAAAGGAATATTTTCTAGT+TGG | + | chr5_3:68811140-68811159 | Msa0827510:intron | 25.0% |
| !! | ATTTTCTATCATCCAATAAG+TGG | - | chr5_3:68811425-68811444 | None:intergenic | 25.0% |
| ! | ATTTCAGTCTTGAATCTTTA+TGG | + | chr5_3:68811443-68811462 | Msa0827510:intron | 25.0% |
| ! | TATAAATTTCAAGACCTCAT+GGG | - | chr5_3:68811611-68811630 | None:intergenic | 25.0% |
| ! | TTATAAATTTCAAGACCTCA+TGG | - | chr5_3:68811612-68811631 | None:intergenic | 25.0% |
| ! | ATGAGGTCTTGAAATTTATA+AGG | + | chr5_3:68811611-68811630 | Msa0827510:intron | 25.0% |
| !!! | AGTAGTTGTTTTTACCTTTT+AGG | + | chr5_3:68811650-68811669 | Msa0827510:intron | 25.0% |
| ! | GTTTAACAACCTAAAATACA+AGG | + | chr5_3:68811918-68811937 | Msa0827510:intron | 25.0% |
| ! | ATTTCCAAAAATACACACAA+TGG | - | chr5_3:68812044-68812063 | None:intergenic | 25.0% |
| !!! | ATTTTAACTTGCTCATAAGA+AGG | - | chr5_3:68812169-68812188 | None:intergenic | 25.0% |
| ! | AACAAAAACGCAACAAAATT+AGG | - | chr5_3:68812205-68812224 | None:intergenic | 25.0% |
| !!! | TTGTTTTTTATTTTGGGCAT+AGG | + | chr5_3:68812220-68812239 | Msa0827510:intron | 25.0% |
| ! | GAAGAACAGGAAAATTAAAA+TGG | + | chr5_3:68812808-68812827 | Msa0827510:intron | 25.0% |
| ! | GTTACTTAATAGTTCATTGA+AGG | + | chr5_3:68813033-68813052 | Msa0827510:intron | 25.0% |
| !! | GATGATTTGAAAGATTTTGA+TGG | + | chr5_3:68813223-68813242 | Msa0827510:intron | 25.0% |
| !!! | CTCTCATACATTTTTTTTTG+AGG | + | chr5_3:68813265-68813284 | Msa0827510:intron | 25.0% |
| ! | TATCTAATATTTGAACTTCC+AGG | - | chr5_3:68813517-68813536 | None:intergenic | 25.0% |
| ! | GGAAGTTCAAATATTAGATA+TGG | + | chr5_3:68813517-68813536 | Msa0827510:CDS | 25.0% |
| ! | ATATTCAGGATATAATGGTA+TGG | + | chr5_3:68813570-68813589 | Msa0827510:intron | 25.0% |
| !! | CTTTTTCTTGTGAATGTTAT+TGG | + | chr5_3:68813624-68813643 | Msa0827510:intron | 25.0% |
| ! | TTTACATGTAAAATTCCAAC+GGG | - | chr5_3:68813672-68813691 | None:intergenic | 25.0% |
| ! | CTTTACATGTAAAATTCCAA+CGG | - | chr5_3:68813673-68813692 | None:intergenic | 25.0% |
| ! | TTAAAGAAGAAAGATCTTCT+GGG | + | chr5_3:68813711-68813730 | Msa0827510:CDS | 25.0% |
| !!! | TTTACAGTAGTCTTTTTTGA+TGG | - | chr5_3:68813783-68813802 | None:intergenic | 25.0% |
| ! | TTAAATTCTTCATTCCATTC+AGG | - | chr5_3:68813822-68813841 | None:intergenic | 25.0% |
| ! | TTATAAACCCTTAAATGAAG+AGG | + | chr5_3:68814143-68814162 | Msa0827510:CDS | 25.0% |
| !! | TAATATACCTCATTAGTTTC+TGG | + | chr5_3:68814473-68814492 | Msa0827510:intron | 25.0% |
| ! | GCTGTATGTAATAAAATGTT+TGG | + | chr5_3:68814716-68814735 | Msa0827510:intron | 25.0% |
| ! | TATCTCACTTTAGATGATTT+AGG | + | chr5_3:68814867-68814886 | Msa0827510:intron | 25.0% |
| ! | AAGAAGGATTTGGATTTAAA+TGG | + | chr5_3:68814991-68815010 | Msa0827510:intron | 25.0% |
| !!! | ATTGAAATCTGTTTTTTGTG+TGG | + | chr5_3:68815214-68815233 | Msa0827510:intron | 25.0% |
| !! | AATAGGTTTTACTTTCTGAA+TGG | - | chr5_3:68815448-68815467 | None:intergenic | 25.0% |
| !!! | TCTAACTTTTTTCAACAATG+AGG | - | chr5_3:68815514-68815533 | None:intergenic | 25.0% |
| !!! | AAAAAAGTTAGAAGTACTAG+TGG | + | chr5_3:68815522-68815541 | Msa0827510:intron | 25.0% |
| ! | TCTTGAGCTTCTATTAATAT+GGG | - | chr5_3:68815736-68815755 | None:intergenic | 25.0% |
| ! | ATCTTGAGCTTCTATTAATA+TGG | - | chr5_3:68815737-68815756 | None:intergenic | 25.0% |
| !! | ATTTACTTTCTAAAGAAGGA+TGG | - | chr5_3:68815873-68815892 | None:intergenic | 25.0% |
| ! | ATCTTAATAGAGGATTAAGA+CGG | - | chr5_3:68815926-68815945 | None:intergenic | 25.0% |
| ! | GATAGTATGAATCTTAATAG+AGG | - | chr5_3:68815936-68815955 | None:intergenic | 25.0% |
| ! | TTGTTTCAATGCTGATAAAT+TGG | + | chr5_3:68816026-68816045 | Msa0827510:intron | 25.0% |
| ! | TGTTTCAATGCTGATAAATT+GGG | + | chr5_3:68816027-68816046 | Msa0827510:intron | 25.0% |
| ! | AGAGAAAAAGTTATACTGAA+AGG | + | chr5_3:68816132-68816151 | Msa0827510:intron | 25.0% |
| ! | CATTCTTAGAATCTATAAGA+TGG | - | chr5_3:68816406-68816425 | None:intergenic | 25.0% |
| !! | CATCTTATAGATTCTAAGAA+TGG | + | chr5_3:68816404-68816423 | Msa0827510:CDS | 25.0% |
| !!! | AAATTTAAGAGATGGTTTTG+CGG | - | chr5_3:68816518-68816537 | None:intergenic | 25.0% |
| ! | ATGCCTGTGATAAAAAAAAA+AGG | + | chr5_3:68816626-68816645 | Msa0827510:three_prime_UTR | 25.0% |
| !!! | AGACCTTTTTTTTTTATCAC+AGG | - | chr5_3:68816632-68816651 | None:intergenic | 25.0% |
| ! | TAGAACAGAATATTTATCCA+CGG | - | chr5_3:68816717-68816736 | None:intergenic | 25.0% |
| TGTAACAGAAAATGATTAGG+GGG | - | chr5_3:68809191-68809210 | None:intergenic | 30.0% | |
| GTGTAACAGAAAATGATTAG+GGG | - | chr5_3:68809192-68809211 | None:intergenic | 30.0% | |
| GGTGTAACAGAAAATGATTA+GGG | - | chr5_3:68809193-68809212 | None:intergenic | 30.0% | |
| AGGTGTAACAGAAAATGATT+AGG | - | chr5_3:68809194-68809213 | None:intergenic | 30.0% | |
| ACTTAGATCCATTCCAAAAT+GGG | + | chr5_3:68809280-68809299 | Msa0827510:exon | 30.0% | |
| ! | GGTTTCTTCAGTACAATTTT+TGG | + | chr5_3:68809301-68809320 | Msa0827510:CDS | 30.0% |
| !! | TTTGGTGTTGGAATTTCAAT+TGG | + | chr5_3:68809334-68809353 | Msa0827510:CDS | 30.0% |
| ! | TTAATCCAATTTGGAATCTC+AGG | - | chr5_3:68809568-68809587 | None:intergenic | 30.0% |
| TAATTTACCCTATCAAAGTC+AGG | - | chr5_3:68809595-68809614 | None:intergenic | 30.0% | |
| CATAGAGTAGTATACAACTA+TGG | + | chr5_3:68809795-68809814 | Msa0827510:intron | 30.0% | |
| ! | TTTGTTTGTGGTTTTTGTCA+AGG | + | chr5_3:68809879-68809898 | Msa0827510:CDS | 30.0% |
| CAACATACCTTATCAAGATA+AGG | - | chr5_3:68809940-68809959 | None:intergenic | 30.0% | |
| TCAACAAACCTTGAAAAGTT+GGG | - | chr5_3:68810181-68810200 | None:intergenic | 30.0% | |
| ATCAACAAACCTTGAAAAGT+TGG | - | chr5_3:68810182-68810201 | None:intergenic | 30.0% | |
| TTTCAAACCTCGATATTAAG+AGG | - | chr5_3:68810340-68810359 | None:intergenic | 30.0% | |
| ATACTTTCTGTCATATTCAC+AGG | + | chr5_3:68810643-68810662 | Msa0827510:intron | 30.0% | |
| TTATGGAGCCTTCTATAAAA+TGG | + | chr5_3:68810701-68810720 | Msa0827510:CDS | 30.0% | |
| TATGGAGCCTTCTATAAAAT+GGG | + | chr5_3:68810702-68810721 | Msa0827510:CDS | 30.0% | |
| TATATGTAATTTCCAGGTTG+TGG | + | chr5_3:68810856-68810875 | Msa0827510:intron | 30.0% | |
| !!! | TTTTTTGTGTATGTGTGTAG+GGG | - | chr5_3:68811002-68811021 | None:intergenic | 30.0% |
| !!! | CTTTTTTGTGTATGTGTGTA+GGG | - | chr5_3:68811003-68811022 | None:intergenic | 30.0% |
| !! | AGTTGATAGTGTTATGATCA+TGG | + | chr5_3:68811075-68811094 | Msa0827510:intron | 30.0% |
| !!! | TTTTTTGTGTATGTGTGTAG+GGG | - | chr5_3:68811002-68811021 | None:intergenic | 30.0% |
| !!! | CTTTTTTGTGTATGTGTGTA+GGG | - | chr5_3:68811003-68811022 | None:intergenic | 30.0% |
| ! | CTTGTACTACTATTTCAAGT+GGG | - | chr5_3:68811280-68811299 | None:intergenic | 30.0% |
| TCTTGTACTACTATTTCAAG+TGG | - | chr5_3:68811281-68811300 | None:intergenic | 30.0% | |
| !! | AGTTGATAGTGTTATGATCA+TGG | + | chr5_3:68811075-68811094 | Msa0827510:intron | 30.0% |
| ! | TGTTGATAGAAACCACTTAT+TGG | + | chr5_3:68811410-68811429 | Msa0827510:intron | 30.0% |
| TATAGAGATGTCAGAATGAA+AGG | - | chr5_3:68811488-68811507 | None:intergenic | 30.0% | |
| TATATACAGATACACAATGC+AGG | + | chr5_3:68811504-68811523 | Msa0827510:intron | 30.0% | |
| ATATACAGATACACAATGCA+GGG | + | chr5_3:68811505-68811524 | Msa0827510:intron | 30.0% | |
| AATATTTGTGCAGCAAAACA+AGG | - | chr5_3:68811571-68811590 | None:intergenic | 30.0% | |
| !!! | AGATGAGTATTTTTAGTGCA+AGG | - | chr5_3:68811748-68811767 | None:intergenic | 30.0% |
| ! | AATGTTTTCACAAAGCGAAT+GGG | - | chr5_3:68811945-68811964 | None:intergenic | 30.0% |
| ! | AAATGTTTTCACAAAGCGAA+TGG | - | chr5_3:68811946-68811965 | None:intergenic | 30.0% |
| ! | TGAACCATTGTGTGTATTTT+TGG | + | chr5_3:68812037-68812056 | Msa0827510:intron | 30.0% |
| ATATTGCCTACGAAAATCAA+TGG | - | chr5_3:68812763-68812782 | None:intergenic | 30.0% | |
| !! | ATGCATTGGTTCTATTTCTT+TGG | - | chr5_3:68812919-68812938 | None:intergenic | 30.0% |
| ! | ATTGAAGGTATAGTTGTATG+TGG | + | chr5_3:68813048-68813067 | Msa0827510:intron | 30.0% |
| ! | TTGAAGGTATAGTTGTATGT+GGG | + | chr5_3:68813049-68813068 | Msa0827510:intron | 30.0% |
| AAGCGAAAACAGAAAATTGA+TGG | + | chr5_3:68813306-68813325 | Msa0827510:intron | 30.0% | |
| TCAATGTACTTAGATAGTCT+TGG | + | chr5_3:68813395-68813414 | Msa0827510:intron | 30.0% | |
| !!! | AGATAGTCTTGGTTTTATTC+AGG | + | chr5_3:68813406-68813425 | Msa0827510:intron | 30.0% |
| ! | CTAATTTAAAGTGTGTTTCC+AGG | + | chr5_3:68813445-68813464 | Msa0827510:intron | 30.0% |
| ! | ATTTGAACTTCCAGGTTTTT+GGG | - | chr5_3:68813509-68813528 | None:intergenic | 30.0% |
| ! | TATTTGAACTTCCAGGTTTT+TGG | - | chr5_3:68813510-68813529 | None:intergenic | 30.0% |
| ! | CGTTGGAATTTTACATGTAA+AGG | + | chr5_3:68813671-68813690 | Msa0827510:CDS | 30.0% |
| GTTAAAGAAGAAAGATCTTC+TGG | + | chr5_3:68813710-68813729 | Msa0827510:CDS | 30.0% | |
| ACAAGAACTTAAATCCTGAA+TGG | + | chr5_3:68813805-68813824 | Msa0827510:CDS | 30.0% | |
| AATAAAACTTTCAGCTCAAG+AGG | - | chr5_3:68813911-68813930 | None:intergenic | 30.0% | |
| ! | TTATAGTTTCGAGTGATATC+TGG | + | chr5_3:68813932-68813951 | Msa0827510:intron | 30.0% |
| ! | TAAAACGTTTAGGTTCTTCA+GGG | - | chr5_3:68814044-68814063 | None:intergenic | 30.0% |
| ! | TTCTCATTTTGAGCATCATT+GGG | - | chr5_3:68814093-68814112 | None:intergenic | 30.0% |
| ! | TTTCTCATTTTGAGCATCAT+TGG | - | chr5_3:68814094-68814113 | None:intergenic | 30.0% |
| ATAGAATGCAAGTACTTCTT+AGG | - | chr5_3:68814351-68814370 | None:intergenic | 30.0% | |
| !! | TATATTTTAGGGAAAAGGTC+GGG | - | chr5_3:68814417-68814436 | None:intergenic | 30.0% |
| !! | CTATATTTTAGGGAAAAGGT+CGG | - | chr5_3:68814418-68814437 | None:intergenic | 30.0% |
| ! | GACCTTTTCCCTAAAATATA+GGG | + | chr5_3:68814417-68814436 | Msa0827510:intron | 30.0% |
| ! | ACCTTTTCCCTAAAATATAG+GGG | + | chr5_3:68814418-68814437 | Msa0827510:intron | 30.0% |
| ! | TGGTTTTCCCCTATATTTTA+GGG | - | chr5_3:68814428-68814447 | None:intergenic | 30.0% |
| CAGAAAACCTCTTTACAATT+CGG | + | chr5_3:68814446-68814465 | Msa0827510:intron | 30.0% | |
| AGAAAACCTCTTTACAATTC+GGG | + | chr5_3:68814447-68814466 | Msa0827510:intron | 30.0% | |
| AAGAATTCCAGAAACTAATG+AGG | - | chr5_3:68814483-68814502 | None:intergenic | 30.0% | |
| GTCACTTATATATGCTTCTT+AGG | + | chr5_3:68814530-68814549 | Msa0827510:intron | 30.0% | |
| ATAGCTTGGTAAATCTCTTA+TGG | + | chr5_3:68814568-68814587 | Msa0827510:intron | 30.0% | |
| TCACTTCATTAAAAGCTTTC+GGG | - | chr5_3:68814606-68814625 | None:intergenic | 30.0% | |
| CTCACTTCATTAAAAGCTTT+CGG | - | chr5_3:68814607-68814626 | None:intergenic | 30.0% | |
| ! | AAGCTTTTAATGAAGTGAGT+TGG | + | chr5_3:68814608-68814627 | Msa0827510:intron | 30.0% |
| AAAAATGTTACTCAAGCTCA+AGG | + | chr5_3:68814662-68814681 | Msa0827510:intron | 30.0% | |
| AAAATGTTACTCAAGCTCAA+GGG | + | chr5_3:68814663-68814682 | Msa0827510:intron | 30.0% | |
| TTTCGAAGTCAATCTCAAAA+TGG | - | chr5_3:68814953-68814972 | None:intergenic | 30.0% | |
| GATATAGATTAGAGTAGTAG+TGG | + | chr5_3:68815166-68815185 | Msa0827510:intron | 30.0% | |
| AACAGATTTCAATCTGAATG+TGG | - | chr5_3:68815207-68815226 | None:intergenic | 30.0% | |
| !!! | AAATCTGTTTTTTGTGTGGA+AGG | + | chr5_3:68815218-68815237 | Msa0827510:intron | 30.0% |
| ACATGTAGTTTATCATTGGT+AGG | - | chr5_3:68815334-68815353 | None:intergenic | 30.0% | |
| TACCAATGATAAACTACATG+TGG | + | chr5_3:68815333-68815352 | Msa0827510:CDS | 30.0% | |
| AAGTAAAACCTATTCAGAGT+TGG | + | chr5_3:68815454-68815473 | Msa0827510:intron | 30.0% | |
| CAAAAGTGAAGGTTAGATTA+GGG | + | chr5_3:68815486-68815505 | Msa0827510:intron | 30.0% | |
| TTTCCTTATTAGGAATCACT+GGG | + | chr5_3:68816323-68816342 | Msa0827510:intron | 30.0% | |
| ! | GAATCAGAAGTACATATGTA+TGG | - | chr5_3:68816485-68816504 | None:intergenic | 30.0% |
| !! | AATTTAAGAGATGGTTTTGC+GGG | - | chr5_3:68816517-68816536 | None:intergenic | 30.0% |
| GGAGACTAAAATTTAAGAGA+TGG | - | chr5_3:68816526-68816545 | None:intergenic | 30.0% | |
| ATTTGGATATATACCAGCAA+GGG | + | chr5_3:68816683-68816702 | Msa0827510:three_prime_UTR | 30.0% | |
| AGAACAGAATATTTATCCAC+GGG | - | chr5_3:68816716-68816735 | None:intergenic | 30.0% | |
| GTGATGTTGTCCTAAATCTA+GGG | - | chr5_3:68809163-68809182 | None:intergenic | 35.0% | |
| ACTATGATATGATACGACGA+AGG | - | chr5_3:68809220-68809239 | None:intergenic | 35.0% | |
| GATCTAAGTGATTTCAGATC+GGG | - | chr5_3:68809269-68809288 | None:intergenic | 35.0% | |
| GGATCTAAGTGATTTCAGAT+CGG | - | chr5_3:68809270-68809289 | None:intergenic | 35.0% | |
| CACTTAGATCCATTCCAAAA+TGG | + | chr5_3:68809279-68809298 | Msa0827510:exon | 35.0% | |
| !! | TGAAGAAACCCATTTTGGAA+TGG | - | chr5_3:68809291-68809310 | None:intergenic | 35.0% |
| ! | TGTACTGAAGAAACCCATTT+TGG | - | chr5_3:68809296-68809315 | None:intergenic | 35.0% |
| ! | ATTTCAATTGGTCTCGTTGT+TGG | + | chr5_3:68809346-68809365 | Msa0827510:CDS | 35.0% |
| ATGATTACCTCAACATCTGT+AGG | - | chr5_3:68809397-68809416 | None:intergenic | 35.0% | |
| TCCTAAAATTACGCCAATAG+TGG | + | chr5_3:68809510-68809529 | Msa0827510:CDS | 35.0% | |
| ! | TCCACTATTGGCGTAATTTT+AGG | - | chr5_3:68809514-68809533 | None:intergenic | 35.0% |
| TTTGCAAAGTTTCATCGTCT+TGG | - | chr5_3:68809537-68809556 | None:intergenic | 35.0% | |
| !! | TGGTTTTTGTCAAGGTTGAT+TGG | + | chr5_3:68809887-68809906 | Msa0827510:CDS | 35.0% |
| !! | TATGTGGCCTTATCTTGATA+AGG | + | chr5_3:68809930-68809949 | Msa0827510:CDS | 35.0% |
| ! | CTTCTCATTGTTCTGTGTTT+TGG | + | chr5_3:68810016-68810035 | Msa0827510:intron | 35.0% |
| GGAATCTGCTCTTCAATTAT+GGG | - | chr5_3:68810104-68810123 | None:intergenic | 35.0% | |
| TGGAATCTGCTCTTCAATTA+TGG | - | chr5_3:68810105-68810124 | None:intergenic | 35.0% | |
| AACAAACCTTGAAAAGTTGG+GGG | - | chr5_3:68810179-68810198 | None:intergenic | 35.0% | |
| CAACAAACCTTGAAAAGTTG+GGG | - | chr5_3:68810180-68810199 | None:intergenic | 35.0% | |
| ATCTAGACATGATGCATTGT+TGG | + | chr5_3:68810200-68810219 | Msa0827510:intron | 35.0% | |
| CATCTGTGCATGCAATTAAA+AGG | - | chr5_3:68810233-68810252 | None:intergenic | 35.0% | |
| GAATTCTCCTCTTAATATCG+AGG | + | chr5_3:68810330-68810349 | Msa0827510:intron | 35.0% | |
| AGTTTATGTGACTGATGAGA+AGG | + | chr5_3:68810672-68810691 | Msa0827510:CDS | 35.0% | |
| ! | TGATGAGAAGGAGTTGATTA+TGG | + | chr5_3:68810684-68810703 | Msa0827510:CDS | 35.0% |
| TTAACAGCAATGGTGACATT+GGG | - | chr5_3:68810736-68810755 | None:intergenic | 35.0% | |
| CAACAAAGTTGTTACCTGAA+CGG | - | chr5_3:68810779-68810798 | None:intergenic | 35.0% | |
| ! | GTAACAACTTTGTTGTGTGT+CGG | + | chr5_3:68810784-68810803 | Msa0827510:intron | 35.0% |
| ! | TTTTTGTGTATGTGTGTAGG+GGG | - | chr5_3:68811001-68811020 | None:intergenic | 35.0% |
| !!! | GCTTTTTTGTGTATGTGTGT+AGG | - | chr5_3:68811004-68811023 | None:intergenic | 35.0% |
| ! | CTTGTGCTACTATTTCAAGT+GGG | - | chr5_3:68811039-68811058 | None:intergenic | 35.0% |
| ! | TCTTGTGCTACTATTTCAAG+TGG | - | chr5_3:68811040-68811059 | None:intergenic | 35.0% |
| ! | TTTTTGTGTATGTGTGTAGG+GGG | - | chr5_3:68811001-68811020 | None:intergenic | 35.0% |
| !!! | GCTTTTTTGTGTATGTGTGT+AGG | - | chr5_3:68811004-68811023 | None:intergenic | 35.0% |
| CAGTCTTGAATCTTTATGGA+AGG | + | chr5_3:68811447-68811466 | Msa0827510:intron | 35.0% | |
| TCTTGAATCTTTATGGAAGG+AGG | + | chr5_3:68811450-68811469 | Msa0827510:intron | 35.0% | |
| !!! | AATGCTATTTTGTTCCCATG+AGG | + | chr5_3:68811594-68811613 | Msa0827510:intron | 35.0% |
| AGCTGTCCTTAATTCCTAAA+AGG | - | chr5_3:68811667-68811686 | None:intergenic | 35.0% | |
| AAATCATGTCCCTATTTGAC+TGG | + | chr5_3:68811697-68811716 | Msa0827510:intron | 35.0% | |
| GGAGAAATTTATGTCCCTTA+GGG | - | chr5_3:68811727-68811746 | None:intergenic | 35.0% | |
| AGGAGAAATTTATGTCCCTT+AGG | - | chr5_3:68811728-68811747 | None:intergenic | 35.0% | |
| ! | AGTTGACTTCCATAATCTGT+TGG | + | chr5_3:68811792-68811811 | Msa0827510:intron | 35.0% |
| ! | GTTGACTTCCATAATCTGTT+GGG | + | chr5_3:68811793-68811812 | Msa0827510:intron | 35.0% |
| ! | TTTGGTTTCCCAACAGATTA+TGG | - | chr5_3:68811804-68811823 | None:intergenic | 35.0% |
| ATAATCTGTTGGGAAACCAA+AGG | + | chr5_3:68811803-68811822 | Msa0827510:intron | 35.0% | |
| TAATCTGTTGGGAAACCAAA+GGG | + | chr5_3:68811804-68811823 | Msa0827510:intron | 35.0% | |
| ! | ATGTTTTCACAAAGCGAATG+GGG | - | chr5_3:68811944-68811963 | None:intergenic | 35.0% |
| TCAAACATTAGGATAGGATG+GGG | - | chr5_3:68812599-68812618 | None:intergenic | 35.0% | |
| CTCAAACATTAGGATAGGAT+GGG | - | chr5_3:68812600-68812619 | None:intergenic | 35.0% | |
| CATCCTATCCTAATGTTTGA+GGG | + | chr5_3:68812599-68812618 | Msa0827510:intron | 35.0% | |
| CAATGGTTCATTTCAAGGAT+GGG | - | chr5_3:68812695-68812714 | None:intergenic | 35.0% | |
| ACAATGGTTCATTTCAAGGA+TGG | - | chr5_3:68812696-68812715 | None:intergenic | 35.0% | |
| GCAAACAATGGTTCATTTCA+AGG | - | chr5_3:68812700-68812719 | None:intergenic | 35.0% | |
| CGATTCAATCAAGAATGCAT+TGG | - | chr5_3:68812933-68812952 | None:intergenic | 35.0% | |
| CAAACTAAAAGAATGGCTTC+TGG | - | chr5_3:68813110-68813129 | None:intergenic | 35.0% | |
| TCCAGCTCAAACTAAAAGAA+TGG | - | chr5_3:68813117-68813136 | None:intergenic | 35.0% | |
| TCTCAAATTTGTGCATTTGC+TGG | + | chr5_3:68813163-68813182 | Msa0827510:intron | 35.0% | |
| ACAAGACGTGGATATATGTT+AGG | - | chr5_3:68813376-68813395 | None:intergenic | 35.0% | |
| ! | GTAAGCTTTAGTTTCACGTA+AGG | - | chr5_3:68813747-68813766 | None:intergenic | 35.0% |
| AACATTGAGCTGTAAAACCT+GGG | - | chr5_3:68813868-68813887 | None:intergenic | 35.0% | |
| AAACATTGAGCTGTAAAACC+TGG | - | chr5_3:68813869-68813888 | None:intergenic | 35.0% | |
| TACAGCTCAATGTTTATGAC+TGG | + | chr5_3:68813874-68813893 | Msa0827510:CDS | 35.0% | |
| ACAGCTCAATGTTTATGACT+GGG | + | chr5_3:68813875-68813894 | Msa0827510:CDS | 35.0% | |
| ! | AAAACGTTTAGGTTCTTCAG+GGG | - | chr5_3:68814043-68814062 | None:intergenic | 35.0% |
| ! | CTAAAACGTTTAGGTTCTTC+AGG | - | chr5_3:68814045-68814064 | None:intergenic | 35.0% |
| !! | AGAACCTAAACGTTTTAGTC+TGG | + | chr5_3:68814047-68814066 | Msa0827510:CDS | 35.0% |
| ! | TCTGGACCTTCTAAAAACTA+TGG | + | chr5_3:68814065-68814084 | Msa0827510:CDS | 35.0% |
| !! | TGGGATCCATAGTTTTTAGA+AGG | - | chr5_3:68814074-68814093 | None:intergenic | 35.0% |
| !!! | AAGCACGTCTTATTTTCAGA+GGG | + | chr5_3:68814298-68814317 | Msa0827510:CDS | 35.0% |
| AGAGAAAAAGACTAAGGTAC+AGG | + | chr5_3:68814323-68814342 | Msa0827510:intron | 35.0% | |
| !! | ATATTTTAGGGAAAAGGTCG+GGG | - | chr5_3:68814416-68814435 | None:intergenic | 35.0% |
| ! | CGACCTTTTCCCTAAAATAT+AGG | + | chr5_3:68814416-68814435 | Msa0827510:intron | 35.0% |
| !! | TCCCCTATATTTTAGGGAAA+AGG | - | chr5_3:68814422-68814441 | None:intergenic | 35.0% |
| !! | CTGGTTTTCCCCTATATTTT+AGG | - | chr5_3:68814429-68814448 | None:intergenic | 35.0% |
| ! | CGAATTGTAAAGAGGTTTTC+TGG | - | chr5_3:68814448-68814467 | None:intergenic | 35.0% |
| GAAAACCTCTTTACAATTCG+GGG | + | chr5_3:68814448-68814467 | Msa0827510:intron | 35.0% | |
| TTAAACCCCGAATTGTAAAG+AGG | - | chr5_3:68814456-68814475 | None:intergenic | 35.0% | |
| ATATATAAGTGACAGCCTAC+GGG | - | chr5_3:68814523-68814542 | None:intergenic | 35.0% | |
| CATATATAAGTGACAGCCTA+CGG | - | chr5_3:68814524-68814543 | None:intergenic | 35.0% | |
| ATATATGCTTCTTAGGAGAG+TGG | + | chr5_3:68814537-68814556 | Msa0827510:intron | 35.0% | |
| ACTTCATTAAAAGCTTTCGG+GGG | - | chr5_3:68814604-68814623 | None:intergenic | 35.0% | |
| CACTTCATTAAAAGCTTTCG+GGG | - | chr5_3:68814605-68814624 | None:intergenic | 35.0% | |
| ! | ATGAAGTGAGTTGGATGAAA+TGG | + | chr5_3:68814617-68814636 | Msa0827510:intron | 35.0% |
| !!! | GCTCAAGGGAATTTTTTTAC+CGG | + | chr5_3:68814677-68814696 | Msa0827510:intron | 35.0% |
| CGCTAGACAAAATAGGATTA+TGG | + | chr5_3:68814797-68814816 | Msa0827510:intron | 35.0% | |
| GGATGCATTAAATAGAGTCA+AGG | + | chr5_3:68814818-68814837 | Msa0827510:intron | 35.0% | |
| TTAGATGATTTAGGCATGTG+TGG | + | chr5_3:68814876-68814895 | Msa0827510:intron | 35.0% | |
| TCTCCTTATTAAAGCTTCTG+CGG | - | chr5_3:68814909-68814928 | None:intergenic | 35.0% | |
| TACAAGCCAAGTCATTAAGA+AGG | + | chr5_3:68814975-68814994 | Msa0827510:intron | 35.0% | |
| CCAAATCCTTCTTAATGACT+TGG | - | chr5_3:68814984-68815003 | None:intergenic | 35.0% | |
| CCAAGTCATTAAGAAGGATT+TGG | + | chr5_3:68814981-68815000 | Msa0827510:intron | 35.0% | |
| ATATGGCTAAATTGACCTAG+TGG | + | chr5_3:68815061-68815080 | Msa0827510:intron | 35.0% | |
| TATGGCTAAATTGACCTAGT+GGG | + | chr5_3:68815062-68815081 | Msa0827510:intron | 35.0% | |
| AAAAGAACAGAGATCCAAGA+TGG | + | chr5_3:68815275-68815294 | Msa0827510:CDS | 35.0% | |
| AAAGAACAGAGATCCAAGAT+GGG | + | chr5_3:68815276-68815295 | Msa0827510:CDS | 35.0% | |
| TGAGTTCCAATTTATAGCAG+AGG | + | chr5_3:68815303-68815322 | Msa0827510:CDS | 35.0% | |
| TGTAGTTTATCATTGGTAGG+AGG | - | chr5_3:68815331-68815350 | None:intergenic | 35.0% | |
| CTCCACATGTAGTTTATCAT+TGG | - | chr5_3:68815338-68815357 | None:intergenic | 35.0% | |
| CAATGATAAACTACATGTGG+AGG | + | chr5_3:68815336-68815355 | Msa0827510:CDS | 35.0% | |
| AGTTAACACCAACTCTGAAT+AGG | - | chr5_3:68815465-68815484 | None:intergenic | 35.0% | |
| GCAAAAGTGAAGGTTAGATT+AGG | + | chr5_3:68815485-68815504 | Msa0827510:intron | 35.0% | |
| ! | GATTTTATCGTATCAGGAAG+AGG | - | chr5_3:68815846-68815865 | None:intergenic | 35.0% |
| !!! | GGTGTTGATTTTATCGTATC+AGG | - | chr5_3:68815852-68815871 | None:intergenic | 35.0% |
| GTGTAAATATATATGCACGG+TGG | - | chr5_3:68816203-68816222 | None:intergenic | 35.0% | |
| CGCGTGTAAATATATATGCA+CGG | - | chr5_3:68816206-68816225 | None:intergenic | 35.0% | |
| CAGTGATTCCTAATAAGGAA+AGG | - | chr5_3:68816324-68816343 | None:intergenic | 35.0% | |
| CTTTCCTTATTAGGAATCAC+TGG | + | chr5_3:68816322-68816341 | Msa0827510:intron | 35.0% | |
| TAACCCAGTGATTCCTAATA+AGG | - | chr5_3:68816329-68816348 | None:intergenic | 35.0% | |
| !! | ATTTAAGAGATGGTTTTGCG+GGG | - | chr5_3:68816516-68816535 | None:intergenic | 35.0% |
| TGTAACGAAAACAGTGAGAA+GGG | + | chr5_3:68816552-68816571 | Msa0827510:three_prime_UTR | 35.0% | |
| GATTTGGATATATACCAGCA+AGG | + | chr5_3:68816682-68816701 | Msa0827510:three_prime_UTR | 35.0% | |
| ATATATACCAGCAAGGGTTT+CGG | + | chr5_3:68816689-68816708 | Msa0827510:three_prime_UTR | 35.0% | |
| !! | CGAAGAAAGCAAAGTATCGA+TGG | - | chr5_3:68809063-68809082 | None:intergenic | 40.0% |
| GAATGAATGAATGAAACGGC+TGG | - | chr5_3:68809111-68809130 | None:intergenic | 40.0% | |
| TTGTCCTAAATCTAGGGATG+GGG | - | chr5_3:68809157-68809176 | None:intergenic | 40.0% | |
| GTTGTCCTAAATCTAGGGAT+GGG | - | chr5_3:68809158-68809177 | None:intergenic | 40.0% | |
| TGTTGTCCTAAATCTAGGGA+TGG | - | chr5_3:68809159-68809178 | None:intergenic | 40.0% | |
| GGTGATGTTGTCCTAAATCT+AGG | - | chr5_3:68809164-68809183 | None:intergenic | 40.0% | |
| AGAAAATGATTAGGGGGTGA+TGG | - | chr5_3:68809185-68809204 | None:intergenic | 40.0% | |
| ATATGATACGACGAAGGTGA+AGG | - | chr5_3:68809214-68809233 | None:intergenic | 40.0% | |
| !!! | GGTTTTTTCGGATTTGGTGT+TGG | + | chr5_3:68809322-68809341 | Msa0827510:CDS | 40.0% |
| CTTTCAACCTACAGATGTTG+AGG | + | chr5_3:68809387-68809406 | Msa0827510:CDS | 40.0% | |
| TGCTTCCTGAGATTCCAAAT+TGG | + | chr5_3:68809560-68809579 | Msa0827510:CDS | 40.0% | |
| ACACTTATCGAAATCGTGTC+TGG | - | chr5_3:68809767-68809786 | None:intergenic | 40.0% | |
| GACACGATTTCGATAAGTGT+CGG | + | chr5_3:68809767-68809786 | Msa0827510:intron | 40.0% | |
| ! | TACCAAAAAGAGGGTCTTGT+GGG | - | chr5_3:68810451-68810470 | None:intergenic | 40.0% |
| ATACCAAAAAGAGGGTCTTG+TGG | - | chr5_3:68810452-68810471 | None:intergenic | 40.0% | |
| TAGTTCATATCTGCTCCCAA+AGG | + | chr5_3:68810533-68810552 | Msa0827510:intron | 40.0% | |
| AGTTCATATCTGCTCCCAAA+GGG | + | chr5_3:68810534-68810553 | Msa0827510:intron | 40.0% | |
| ! | TTTCCGGCCCATTTTATAGA+AGG | - | chr5_3:68810712-68810731 | None:intergenic | 40.0% |
| AATGGTGACATTGGGATTTC+CGG | - | chr5_3:68810728-68810747 | None:intergenic | 40.0% | |
| CTTAACAGCAATGGTGACAT+TGG | - | chr5_3:68810737-68810756 | None:intergenic | 40.0% | |
| ! | CAATGTCACCATTGCTGTTA+AGG | + | chr5_3:68810735-68810754 | Msa0827510:CDS | 40.0% |
| ! | ACCATTGCTGTTAAGGCATT+TGG | + | chr5_3:68810742-68810761 | Msa0827510:CDS | 40.0% |
| ! | CCATTGCTGTTAAGGCATTT+GGG | + | chr5_3:68810743-68810762 | Msa0827510:CDS | 40.0% |
| AAACTTGCAAATCCACAACC+TGG | - | chr5_3:68810871-68810890 | None:intergenic | 40.0% | |
| AAAGGCTTCAATGTAATGCG+AGG | - | chr5_3:68810902-68810921 | None:intergenic | 40.0% | |
| TCGCATTACATTGAAGCCTT+TGG | + | chr5_3:68810901-68810920 | Msa0827510:CDS | 40.0% | |
| ACATAGATGTTGGCAAAGCA+AGG | - | chr5_3:68810938-68810957 | None:intergenic | 40.0% | |
| ! | TTTTGTGTATGTGTGTAGGG+GGG | - | chr5_3:68811000-68811019 | None:intergenic | 40.0% |
| GTCGAGATATGCTCAAAACA+TGG | - | chr5_3:68811119-68811138 | None:intergenic | 40.0% | |
| TGAGCATATCTCGACAACAA+AGG | + | chr5_3:68811124-68811143 | Msa0827510:intron | 40.0% | |
| ACATAGATGTTGGCAAAGCA+AGG | - | chr5_3:68810938-68810957 | None:intergenic | 40.0% | |
| ! | TTTTGTGTATGTGTGTAGGG+GGG | - | chr5_3:68811000-68811019 | None:intergenic | 40.0% |
| GTCGAGATATGCTCAAAACA+TGG | - | chr5_3:68811119-68811138 | None:intergenic | 40.0% | |
| TGAGCATATCTCGACAACAA+AGG | + | chr5_3:68811124-68811143 | Msa0827510:intron | 40.0% | |
| ATCTTTATGGAAGGAGGAGT+TGG | + | chr5_3:68811456-68811475 | Msa0827510:intron | 40.0% | |
| ATTAAGGACAGCTAAGCATC+TGG | + | chr5_3:68811674-68811693 | Msa0827510:intron | 40.0% | |
| TAGGGTATGCCAGTCAAATA+GGG | - | chr5_3:68811709-68811728 | None:intergenic | 40.0% | |
| TTAGGGTATGCCAGTCAAAT+AGG | - | chr5_3:68811710-68811729 | None:intergenic | 40.0% | |
| TATTTGACTGGCATACCCTA+AGG | + | chr5_3:68811709-68811728 | Msa0827510:intron | 40.0% | |
| ATTTGACTGGCATACCCTAA+GGG | + | chr5_3:68811710-68811729 | Msa0827510:intron | 40.0% | |
| TCATCACTACAATAGCCCTT+TGG | - | chr5_3:68811822-68811841 | None:intergenic | 40.0% | |
| AGCTAGAGATGATGCATTTC+TGG | - | chr5_3:68812097-68812116 | None:intergenic | 40.0% | |
| TCATCTTCTCTCCATCACAT+TGG | + | chr5_3:68812123-68812142 | Msa0827510:intron | 40.0% | |
| CTTGAAGTGAACCAATGTGA+TGG | - | chr5_3:68812137-68812156 | None:intergenic | 40.0% | |
| TTTAGCCCAAAGTCAACATG+TGG | - | chr5_3:68812488-68812507 | None:intergenic | 40.0% | |
| ACTTTGGGCTAAAGCTTCTA+GGG | + | chr5_3:68812495-68812514 | Msa0827510:CDS | 40.0% | |
| GCTGATCTTATGTCTATTCC+TGG | + | chr5_3:68812518-68812537 | Msa0827510:CDS | 40.0% | |
| CCTCAAACATTAGGATAGGA+TGG | - | chr5_3:68812601-68812620 | None:intergenic | 40.0% | |
| CCATCCTATCCTAATGTTTG+AGG | + | chr5_3:68812598-68812617 | Msa0827510:intron | 40.0% | |
| AAGCCCTCAAACATTAGGAT+AGG | - | chr5_3:68812605-68812624 | None:intergenic | 40.0% | |
| AACTCAAGCCCTCAAACATT+AGG | - | chr5_3:68812610-68812629 | None:intergenic | 40.0% | |
| TCATCTTCCACTCTTTAAGC+CGG | + | chr5_3:68812638-68812657 | Msa0827510:intron | 40.0% | |
| TGAACCATTGTTTGCTCAAG+TGG | + | chr5_3:68812705-68812724 | Msa0827510:intron | 40.0% | |
| AGATCCACTTGAGCAAACAA+TGG | - | chr5_3:68812712-68812731 | None:intergenic | 40.0% | |
| !!! | AGCAGACCATTGATTTTCGT+AGG | + | chr5_3:68812754-68812773 | Msa0827510:intron | 40.0% |
| !!! | GCCATTCTTTTAGTTTGAGC+TGG | + | chr5_3:68813113-68813132 | Msa0827510:intron | 40.0% |
| TGAGATTCTAACTCTACCAG+AGG | - | chr5_3:68813148-68813167 | None:intergenic | 40.0% | |
| CTAAGTACATTGACAAGACG+TGG | - | chr5_3:68813388-68813407 | None:intergenic | 40.0% | |
| AGGTTGCAAACATGTATCTG+TGG | + | chr5_3:68813483-68813502 | Msa0827510:CDS | 40.0% | |
| TTGGGAATCTTAGAGCTATG+AGG | + | chr5_3:68813643-68813662 | Msa0827510:intron | 40.0% | |
| !! | GTTGTTTTATGCCTTCGCTT+AGG | + | chr5_3:68813966-68813985 | Msa0827510:intron | 40.0% |
| ! | TTTTATGCCTTCGCTTAGGT+TGG | + | chr5_3:68813970-68813989 | Msa0827510:intron | 40.0% |
| TTTATGCCTTCGCTTAGGTT+GGG | + | chr5_3:68813971-68813990 | Msa0827510:intron | 40.0% | |
| AGGTCCAGACTAAAACGTTT+AGG | - | chr5_3:68814054-68814073 | None:intergenic | 40.0% | |
| ACCCTTAAATGAAGAGGAGA+TGG | + | chr5_3:68814149-68814168 | Msa0827510:CDS | 40.0% | |
| CCCATCTCCTCTTCATTTAA+GGG | - | chr5_3:68814153-68814172 | None:intergenic | 40.0% | |
| CCCTTAAATGAAGAGGAGAT+GGG | + | chr5_3:68814150-68814169 | Msa0827510:CDS | 40.0% | |
| CATGAAGCTCAAGATGTTGA+GGG | + | chr5_3:68814255-68814274 | Msa0827510:CDS | 40.0% | |
| ATGAAGCTCAAGATGTTGAG+GGG | + | chr5_3:68814256-68814275 | Msa0827510:CDS | 40.0% | |
| CTGAAAATAAGACGTGCTTG+TGG | - | chr5_3:68814297-68814316 | None:intergenic | 40.0% | |
| !!! | CAAGCACGTCTTATTTTCAG+AGG | + | chr5_3:68814297-68814316 | Msa0827510:CDS | 40.0% |
| !!! | AGCACGTCTTATTTTCAGAG+GGG | + | chr5_3:68814299-68814318 | Msa0827510:CDS | 40.0% |
| AGGGGAAGAGAAAAAGACTA+AGG | + | chr5_3:68814317-68814336 | Msa0827510:CDS | 40.0% | |
| TATATAAGTGACAGCCTACG+GGG | - | chr5_3:68814522-68814541 | None:intergenic | 40.0% | |
| GAGTGGTTATGGATATAGCT+TGG | + | chr5_3:68814554-68814573 | Msa0827510:intron | 40.0% | |
| ! | AAGTGAGTTGGATGAAATGG+AGG | + | chr5_3:68814620-68814639 | Msa0827510:intron | 40.0% |
| GTCAACACGCTAGACAAAAT+AGG | + | chr5_3:68814790-68814809 | Msa0827510:intron | 40.0% | |
| ! | GAGTCAAGGTAGCACTATTT+TGG | + | chr5_3:68814832-68814851 | Msa0827510:intron | 40.0% |
| ! | TAGCCGCAGAAGCTTTAATA+AGG | + | chr5_3:68814903-68814922 | Msa0827510:intron | 40.0% |
| ! | CTAGTGGGAAAAAGCTTTAG+CGG | + | chr5_3:68815077-68815096 | Msa0827510:intron | 40.0% |
| TGTGTGGAAGGCTAATGATA+CGG | + | chr5_3:68815230-68815249 | Msa0827510:intron | 40.0% | |
| AAGTACCTTCTGATGAAGCA+AGG | - | chr5_3:68815383-68815402 | None:intergenic | 40.0% | |
| GGTGTTAACTGCAAAAGTGA+AGG | + | chr5_3:68815475-68815494 | Msa0827510:intron | 40.0% | |
| TGGGTTATGACGTTATGTCA+TGG | + | chr5_3:68815620-68815639 | Msa0827510:intron | 40.0% | |
| TGCTTTACTCGAAGCAAAAG+TGG | - | chr5_3:68815686-68815705 | None:intergenic | 40.0% | |
| AGAAGCTCAAGATGTGTACT+TGG | + | chr5_3:68815744-68815763 | Msa0827510:intron | 40.0% | |
| AGTATTCCTTGGTAGACAGT+AGG | - | chr5_3:68815980-68815999 | None:intergenic | 40.0% | |
| ATGCACGGTGGTGATATAAA+AGG | - | chr5_3:68816191-68816210 | None:intergenic | 40.0% | |
| CTGATGCTCCTTTCCTTATT+AGG | + | chr5_3:68816313-68816332 | Msa0827510:intron | 40.0% | |
| GGTTATGTCGACATCAATCT+CGG | + | chr5_3:68816344-68816363 | Msa0827510:CDS | 40.0% | |
| GTTATGTCGACATCAATCTC+GGG | + | chr5_3:68816345-68816364 | Msa0827510:CDS | 40.0% | |
| TTATGTCGACATCAATCTCG+GGG | + | chr5_3:68816346-68816365 | Msa0827510:CDS | 40.0% | |
| ! | ACTGTTTTCGTTACACTGCA+CGG | - | chr5_3:68816547-68816566 | None:intergenic | 40.0% |
| GTGTAACGAAAACAGTGAGA+AGG | + | chr5_3:68816551-68816570 | Msa0827510:three_prime_UTR | 40.0% | |
| TAAATCTAGGGATGGGGATG+GGG | - | chr5_3:68809151-68809170 | None:intergenic | 45.0% | |
| CTAAATCTAGGGATGGGGAT+GGG | - | chr5_3:68809152-68809171 | None:intergenic | 45.0% | |
| TCATCGTCTTGGTCCACTAT+TGG | - | chr5_3:68809526-68809545 | None:intergenic | 45.0% | |
| !! | TGAAGCACTGACACATACAC+CGG | + | chr5_3:68809639-68809658 | Msa0827510:intron | 45.0% |
| CAGTGTCGTAGTATCGTATC+CGG | - | chr5_3:68809661-68809680 | None:intergenic | 45.0% | |
| TGACACTGACATGTCAACAC+CGG | + | chr5_3:68809679-68809698 | Msa0827510:intron | 45.0% | |
| AATTGCATGCACAGATGCTC+AGG | + | chr5_3:68810236-68810255 | Msa0827510:intron | 45.0% | |
| ! | ACCAAAAAGAGGGTCTTGTG+GGG | - | chr5_3:68810450-68810469 | None:intergenic | 45.0% |
| ! | GGCGAAAAGTACATCCCTTT+GGG | - | chr5_3:68810551-68810570 | None:intergenic | 45.0% |
| GAGCCTTCTATAAAATGGGC+CGG | + | chr5_3:68810706-68810725 | Msa0827510:CDS | 45.0% | |
| CCCAAATGCCTTAACAGCAA+TGG | - | chr5_3:68810746-68810765 | None:intergenic | 45.0% | |
| CAAGGAAAGCTTGGAACCAA+AGG | - | chr5_3:68810920-68810939 | None:intergenic | 45.0% | |
| TTGGCAAAGCAAGGAAAGCT+TGG | - | chr5_3:68810929-68810948 | None:intergenic | 45.0% | |
| CATGAGAGCGACATAGATGT+TGG | - | chr5_3:68810948-68810967 | None:intergenic | 45.0% | |
| CAACATCTATGTCGCTCTCA+TGG | + | chr5_3:68810946-68810965 | Msa0827510:CDS | 45.0% | |
| CTATGTCGCTCTCATGGAAA+AGG | + | chr5_3:68810952-68810971 | Msa0827510:CDS | 45.0% | |
| CATGAGAGCGACATAGATGT+TGG | - | chr5_3:68810948-68810967 | None:intergenic | 45.0% | |
| CAACATCTATGTCGCTCTCA+TGG | + | chr5_3:68810946-68810965 | Msa0827510:CDS | 45.0% | |
| CTATGTCGCTCTCATGGAAA+AGG | + | chr5_3:68810952-68810971 | Msa0827510:CDS | 45.0% | |
| TTTGTGTATGTGTGTAGGGG+GGG | - | chr5_3:68810999-68811018 | None:intergenic | 45.0% | |
| ATGGAAGGAGGAGTTGGAAT+AGG | + | chr5_3:68811462-68811481 | Msa0827510:intron | 45.0% | |
| GACCAATGTTTGAGCTGTTG+TGG | + | chr5_3:68811847-68811866 | Msa0827510:intron | 45.0% | |
| GTCCACAACAGCTCAAACAT+TGG | - | chr5_3:68811852-68811871 | None:intergenic | 45.0% | |
| !! | CGAATGGGGCCTTGTATTTT+AGG | - | chr5_3:68811930-68811949 | None:intergenic | 45.0% |
| ! | CTTGCTCATAAGAAGGTGTG+AGG | - | chr5_3:68812162-68812181 | None:intergenic | 45.0% |
| !! | TGCAGCCACATGTTGACTTT+GGG | + | chr5_3:68812480-68812499 | Msa0827510:intron | 45.0% |
| GACTTTGGGCTAAAGCTTCT+AGG | + | chr5_3:68812494-68812513 | Msa0827510:CDS | 45.0% | |
| CTTTGGGCTAAAGCTTCTAG+GGG | + | chr5_3:68812496-68812515 | Msa0827510:CDS | 45.0% | |
| TGTCTATTCCTGGTGTCTAC+AGG | + | chr5_3:68812528-68812547 | Msa0827510:CDS | 45.0% | |
| TGAACAATCCTGTAGACACC+AGG | - | chr5_3:68812539-68812558 | None:intergenic | 45.0% | |
| TGGTGTCTACAGGATTGTTC+AGG | + | chr5_3:68812538-68812557 | Msa0827510:CDS | 45.0% | |
| CATCACTCTTGCAGAAGAAC+AGG | + | chr5_3:68812795-68812814 | Msa0827510:intron | 45.0% | |
| TATAGTTGTATGTGGGCCAG+TGG | + | chr5_3:68813056-68813075 | Msa0827510:intron | 45.0% | |
| ! | GAGCTGGATGTTTTATCCTC+TGG | + | chr5_3:68813129-68813148 | Msa0827510:intron | 45.0% |
| CCTGATCTTTGATAAGCTCC+TGG | - | chr5_3:68813466-68813485 | None:intergenic | 45.0% | |
| CCAGGAGCTTATCAAAGATC+AGG | + | chr5_3:68813463-68813482 | Msa0827510:intron | 45.0% | |
| CAATGTTTATGACTGGGAGC+AGG | + | chr5_3:68813881-68813900 | Msa0827510:CDS | 45.0% | |
| ! | AGTTTCGAGTGATATCTGGC+TGG | + | chr5_3:68813936-68813955 | Msa0827510:intron | 45.0% |
| GCTCAAAATGAGAAATCGCG+AGG | + | chr5_3:68814099-68814118 | Msa0827510:CDS | 45.0% | |
| GCCCATCTCCTCTTCATTTA+AGG | - | chr5_3:68814154-68814173 | None:intergenic | 45.0% | |
| AAATGAAGAGGAGATGGGCA+AGG | + | chr5_3:68814155-68814174 | Msa0827510:CDS | 45.0% | |
| AATGAAGAGGAGATGGGCAA+GGG | + | chr5_3:68814156-68814175 | Msa0827510:CDS | 45.0% | |
| ACAATTCCTAAAGCTCCCGA+AGG | + | chr5_3:68814195-68814214 | Msa0827510:CDS | 45.0% | |
| CCTCAACATCTTGAGCTTCA+TGG | - | chr5_3:68814257-68814276 | None:intergenic | 45.0% | |
| CCATGAAGCTCAAGATGTTG+AGG | + | chr5_3:68814254-68814273 | Msa0827510:CDS | 45.0% | |
| ATATAAGTGACAGCCTACGG+GGG | - | chr5_3:68814521-68814540 | None:intergenic | 45.0% | |
| GCTTCTTAGGAGAGTGGTTA+TGG | + | chr5_3:68814543-68814562 | Msa0827510:intron | 45.0% | |
| AGCGTTGCAAGTCATATAGC+CGG | - | chr5_3:68814699-68814718 | None:intergenic | 45.0% | |
| !! | CGCTAAAGCTTTTTCCCACT+AGG | - | chr5_3:68815079-68815098 | None:intergenic | 45.0% |
| TGGAACTCATCTTCCCATCT+TGG | - | chr5_3:68815292-68815311 | None:intergenic | 45.0% | |
| GAGGCTCCTCTGCTATAAAT+TGG | - | chr5_3:68815312-68815331 | None:intergenic | 45.0% | |
| ACGAACCTTGCTTCATCAGA+AGG | + | chr5_3:68815375-68815394 | Msa0827510:CDS | 45.0% | |
| TGAACTCCTACTGTCTACCA+AGG | + | chr5_3:68815971-68815990 | Msa0827510:intron | 45.0% | |
| CGCGTAAATGTGCTTTGACT+TGG | + | chr5_3:68816222-68816241 | Msa0827510:intron | 45.0% | |
| ! | TTCTAAGAATGGTCGCATCC+AGG | + | chr5_3:68816415-68816434 | Msa0827510:CDS | 45.0% |
| GGAGAACTGCATAAGCATGA+TGG | + | chr5_3:68816450-68816469 | Msa0827510:exon | 45.0% | |
| CCTAAATCTAGGGATGGGGA+TGG | - | chr5_3:68809153-68809172 | None:intergenic | 50.0% | |
| CCATCCCCATCCCTAGATTT+AGG | + | chr5_3:68809150-68809169 | Msa0827510:five_prime_UTR | 50.0% | |
| GAGTTTCAGACGCTCACTCT+CGG | + | chr5_3:68810146-68810165 | Msa0827510:CDS | 50.0% | |
| AGTTTCAGACGCTCACTCTC+GGG | + | chr5_3:68810147-68810166 | Msa0827510:CDS | 50.0% | |
| ACCTTGAAAAGTTGGGGGCA+GGG | - | chr5_3:68810174-68810193 | None:intergenic | 50.0% | |
| AACCTTGAAAAGTTGGGGGC+AGG | - | chr5_3:68810175-68810194 | None:intergenic | 50.0% | |
| ! | TCCCCACAAGACCCTCTTTT+TGG | + | chr5_3:68810446-68810465 | Msa0827510:intron | 50.0% |
| ! | CGGCGAAAAGTACATCCCTT+TGG | - | chr5_3:68810552-68810571 | None:intergenic | 50.0% |
| ! | TGGGTTGAAAGCAACCGTTC+AGG | + | chr5_3:68810762-68810781 | Msa0827510:CDS | 50.0% |
| GTCGCTCTCATGGAAAAGGT+TGG | + | chr5_3:68810956-68810975 | Msa0827510:intron | 50.0% | |
| GTCGCTCTCATGGAAAAGGT+TGG | + | chr5_3:68810956-68810975 | Msa0827510:intron | 50.0% | |
| !! | GTGCAGCCACATGTTGACTT+TGG | + | chr5_3:68812479-68812498 | Msa0827510:intron | 50.0% |
| TTCCACTCTTTAAGCCGGAG+TGG | + | chr5_3:68812643-68812662 | Msa0827510:intron | 50.0% | |
| TACCACTCCGGCTTAAAGAG+TGG | - | chr5_3:68812648-68812667 | None:intergenic | 50.0% | |
| ATGCAGGACAGTTACCACTC+CGG | - | chr5_3:68812660-68812679 | None:intergenic | 50.0% | |
| TGGGAGATTGTCTGTGATGC+AGG | - | chr5_3:68812676-68812695 | None:intergenic | 50.0% | |
| CAACATCCAACTGACACCAC+TGG | - | chr5_3:68813075-68813094 | None:intergenic | 50.0% | |
| GTATCTGTGGCCCAAAAACC+TGG | + | chr5_3:68813496-68813515 | Msa0827510:CDS | 50.0% | |
| GCTGTAAAACCTGGGTCTCT+GGG | - | chr5_3:68813860-68813879 | None:intergenic | 50.0% | |
| AGCTGTAAAACCTGGGTCTC+TGG | - | chr5_3:68813861-68813880 | None:intergenic | 50.0% | |
| ATCGCGAGGACAGATTGTTG+TGG | + | chr5_3:68814113-68814132 | Msa0827510:CDS | 50.0% | |
| !! | TTTTAGGGAAAAGGTCGGGG+AGG | - | chr5_3:68814413-68814432 | None:intergenic | 50.0% |
| AACTCAACTAATCCCCCCGT+AGG | + | chr5_3:68814505-68814524 | Msa0827510:intron | 50.0% | |
| TATAAGTGACAGCCTACGGG+GGG | - | chr5_3:68814520-68814539 | None:intergenic | 50.0% | |
| ! | GTGGGAAAAAGCTTTAGCGG+TGG | + | chr5_3:68815080-68815099 | Msa0827510:intron | 50.0% |
| GTGGAAGGCTAATGATACGG+TGG | + | chr5_3:68815233-68815252 | Msa0827510:intron | 50.0% | |
| CTGATGAAGCAAGGTTCGTG+AGG | - | chr5_3:68815374-68815393 | None:intergenic | 50.0% | |
| TGGGTAACTGTCAGCATGCT+GGG | - | chr5_3:68815717-68815736 | None:intergenic | 50.0% | |
| ATGGGTAACTGTCAGCATGC+TGG | - | chr5_3:68815718-68815737 | None:intergenic | 50.0% | |
| TTCTCCACTGCAACTCTACC+TGG | - | chr5_3:68816436-68816455 | None:intergenic | 50.0% | |
| CACATGTGTCTGCGTCGTGT+TGG | + | chr5_3:68809738-68809757 | Msa0827510:intron | 55.0% | |
| ! | ACCCTGCCCCCAACTTTTCA+AGG | + | chr5_3:68810170-68810189 | Msa0827510:CDS | 55.0% |
| AGAGCTATGAGGAGACCCGT+TGG | + | chr5_3:68813654-68813673 | Msa0827510:intron | 55.0% | |
| AGTCAAAGACCCAGAGACCC+AGG | + | chr5_3:68813848-68813867 | Msa0827510:CDS | 55.0% | |
| ! | ACAAGTTGACCTCCACCAGC+TGG | - | chr5_3:68814225-68814244 | None:intergenic | 55.0% |
| GTAACTGTCAGCATGCTGGG+GGG | - | chr5_3:68815714-68815733 | None:intergenic | 55.0% | |
| GGTAACTGTCAGCATGCTGG+GGG | - | chr5_3:68815715-68815734 | None:intergenic | 55.0% | |
| GGGTAACTGTCAGCATGCTG+GGG | - | chr5_3:68815716-68815735 | None:intergenic | 55.0% | |
| GCATCCAGGTAGAGTTGCAG+TGG | + | chr5_3:68816429-68816448 | Msa0827510:CDS | 55.0% | |
| !! | GAGATGGTTTTGCGGGGTGA+GGG | - | chr5_3:68816510-68816529 | None:intergenic | 55.0% |
| !! | AGAGATGGTTTTGCGGGGTG+AGG | - | chr5_3:68816511-68816530 | None:intergenic | 55.0% |
| TCTAGGGATGGGGATGGGGA+TGG | - | chr5_3:68809147-68809166 | None:intergenic | 60.0% | |
| ! | TGTGGGCCAGTGGTGTCAGT+TGG | + | chr5_3:68813066-68813085 | Msa0827510:intron | 60.0% |
| ! | GGAGTGCCTTCGGGAGCTTT+AGG | - | chr5_3:68814204-68814223 | None:intergenic | 60.0% |
| ! | TCCACCAGCTGGAGTGCCTT+CGG | - | chr5_3:68814214-68814233 | None:intergenic | 60.0% |
| !! | ATGGTTTTGCGGGGTGAGGG+TGG | - | chr5_3:68816507-68816526 | None:intergenic | 60.0% |
| GGATGGGGATGGGGATGGTG+GGG | - | chr5_3:68809142-68809161 | None:intergenic | 65.0% | |
| GGGATGGGGATGGGGATGGT+GGG | - | chr5_3:68809143-68809162 | None:intergenic | 65.0% | |
| AGGGATGGGGATGGGGATGG+TGG | - | chr5_3:68809144-68809163 | None:intergenic | 65.0% | |
| ! | CCACCAGCTGGAGTGCCTTC+GGG | - | chr5_3:68814213-68814232 | None:intergenic | 65.0% |
| !! | GAAGGCACTCCAGCTGGTGG+AGG | + | chr5_3:68814213-68814232 | Msa0827510:CDS | 65.0% |
| CACGGGACCGAAACCCTTGC+TGG | - | chr5_3:68816699-68816718 | None:intergenic | 65.0% | |
| CAGCAAGGGTTTCGGTCCCG+TGG | + | chr5_3:68816697-68816716 | Msa0827510:three_prime_UTR | 65.0% | |
| !! | GCTCCCGAAGGCACTCCAGC+TGG | + | chr5_3:68814207-68814226 | Msa0827510:CDS | 70.0% |
| !! | CCCGAAGGCACTCCAGCTGG+TGG | + | chr5_3:68814210-68814229 | Msa0827510:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 68808996 | 68816787 | 68808996 | ID=Msa0827510;Name=Msa0827510 |
| chr5_3 | mRNA | 68808996 | 68816787 | 68808996 | ID=Msa0827510-mRNA-1;Parent=Msa0827510;Name=Msa0827510-mRNA-1;_AED=0.14;_eAED=0.14;_QI=302|0.90|0.91|1|1|1|12|324|552 |
| chr5_3 | exon | 68808996 | 68809408 | 68808996 | ID=Msa0827510-mRNA-1:exon:21619;Parent=Msa0827510-mRNA-1 |
| chr5_3 | exon | 68809508 | 68809606 | 68809508 | ID=Msa0827510-mRNA-1:exon:21620;Parent=Msa0827510-mRNA-1 |
| chr5_3 | exon | 68809856 | 68809951 | 68809856 | ID=Msa0827510-mRNA-1:exon:21621;Parent=Msa0827510-mRNA-1 |
| chr5_3 | exon | 68810068 | 68810191 | 68810068 | ID=Msa0827510-mRNA-1:exon:21622;Parent=Msa0827510-mRNA-1 |
| chr5_3 | exon | 68810665 | 68810783 | 68810665 | ID=Msa0827510-mRNA-1:exon:21623;Parent=Msa0827510-mRNA-1 |
| chr5_3 | exon | 68810872 | 68810973 | 68810872 | ID=Msa0827510-mRNA-1:exon:21624;Parent=Msa0827510-mRNA-1 |
| chr5_3 | exon | 68812485 | 68812559 | 68812485 | ID=Msa0827510-mRNA-1:exon:21625;Parent=Msa0827510-mRNA-1 |
| chr5_3 | exon | 68813467 | 68813543 | 68813467 | ID=Msa0827510-mRNA-1:exon:21626;Parent=Msa0827510-mRNA-1 |
| chr5_3 | exon | 68813656 | 68813902 | 68813656 | ID=Msa0827510-mRNA-1:exon:21627;Parent=Msa0827510-mRNA-1 |
| chr5_3 | exon | 68813988 | 68814338 | 68813988 | ID=Msa0827510-mRNA-1:exon:21628;Parent=Msa0827510-mRNA-1 |
| chr5_3 | exon | 68815268 | 68815396 | 68815268 | ID=Msa0827510-mRNA-1:exon:21629;Parent=Msa0827510-mRNA-1 |
| chr5_3 | exon | 68816335 | 68816787 | 68816335 | ID=Msa0827510-mRNA-1:exon:21630;Parent=Msa0827510-mRNA-1 |
| chr5_3 | five_prime_UTR | 68808996 | 68809297 | 68808996 | ID=Msa0827510-mRNA-1:five_prime_utr;Parent=Msa0827510-mRNA-1 |
| chr5_3 | CDS | 68809298 | 68809408 | 68809298 | ID=Msa0827510-mRNA-1:cds;Parent=Msa0827510-mRNA-1 |
| chr5_3 | CDS | 68809508 | 68809606 | 68809508 | ID=Msa0827510-mRNA-1:cds;Parent=Msa0827510-mRNA-1 |
| chr5_3 | CDS | 68809856 | 68809951 | 68809856 | ID=Msa0827510-mRNA-1:cds;Parent=Msa0827510-mRNA-1 |
| chr5_3 | CDS | 68810068 | 68810191 | 68810068 | ID=Msa0827510-mRNA-1:cds;Parent=Msa0827510-mRNA-1 |
| chr5_3 | CDS | 68810665 | 68810783 | 68810665 | ID=Msa0827510-mRNA-1:cds;Parent=Msa0827510-mRNA-1 |
| chr5_3 | CDS | 68810872 | 68810973 | 68810872 | ID=Msa0827510-mRNA-1:cds;Parent=Msa0827510-mRNA-1 |
| chr5_3 | CDS | 68812485 | 68812559 | 68812485 | ID=Msa0827510-mRNA-1:cds;Parent=Msa0827510-mRNA-1 |
| chr5_3 | CDS | 68813467 | 68813543 | 68813467 | ID=Msa0827510-mRNA-1:cds;Parent=Msa0827510-mRNA-1 |
| chr5_3 | CDS | 68813656 | 68813902 | 68813656 | ID=Msa0827510-mRNA-1:cds;Parent=Msa0827510-mRNA-1 |
| chr5_3 | CDS | 68813988 | 68814338 | 68813988 | ID=Msa0827510-mRNA-1:cds;Parent=Msa0827510-mRNA-1 |
| chr5_3 | CDS | 68815268 | 68815396 | 68815268 | ID=Msa0827510-mRNA-1:cds;Parent=Msa0827510-mRNA-1 |
| chr5_3 | CDS | 68816335 | 68816463 | 68816335 | ID=Msa0827510-mRNA-1:cds;Parent=Msa0827510-mRNA-1 |
| chr5_3 | three_prime_UTR | 68816464 | 68816787 | 68816464 | ID=Msa0827510-mRNA-1:three_prime_utr;Parent=Msa0827510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
