AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0687940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0687940 MtrunA17_Chr4g0039651 99.002 501 5 0 1 501 1 501 0.0 974
Msa0687940 MtrunA17_Chr4g0032021 61.066 488 177 3 17 501 78 555 0.0 578
Msa0687940 MtrunA17_Chr6g0485661 31.791 497 304 8 8 490 25 500 8.82e-74 242
Msa0687940 MtrunA17_Chr3g0144361 32.193 497 301 8 18 497 11 488 1.37e-73 241
Msa0687940 MtrunA17_Chr4g0034681 32.213 506 297 13 14 498 9 489 1.52e-68 228
Msa0687940 MtrunA17_Chr4g0021771 28.070 513 315 11 9 497 17 499 4.55e-67 224
Msa0687940 MtrunA17_Chr5g0432581 30.561 481 308 6 32 497 10 479 2.96e-66 222
Msa0687940 MtrunA17_Chr4g0036021 31.546 485 293 9 36 497 16 484 4.35e-66 222
Msa0687940 MtrunA17_Chr8g0390521 32.068 474 290 9 38 498 15 469 5.44e-65 218
Msa0687940 MtrunA17_Chr2g0282031 30.146 481 288 10 35 497 47 497 7.45e-65 219
Msa0687940 MtrunA17_Chr1g0213631 33.503 394 242 6 112 497 48 429 6.30e-63 212
Msa0687940 MtrunA17_Chr7g0214451 32.026 459 271 8 55 497 43 476 1.31e-60 207
Msa0687940 MtrunA17_Chr8g0373531 29.895 475 307 6 38 497 16 479 4.07e-60 206
Msa0687940 MtrunA17_Chr7g0259471 31.417 487 288 14 27 498 16 471 3.86e-59 202
Msa0687940 MtrunA17_Chr1g0213611 30.217 460 286 6 53 497 86 525 1.66e-58 202
Msa0687940 MtrunA17_Chr6g0457781 31.780 472 282 11 37 497 97 539 1.97e-57 199
Msa0687940 MtrunA17_Chr7g0259221 31.224 490 285 14 27 498 18 473 2.46e-57 197
Msa0687940 MtrunA17_Chr1g0155221 30.642 483 296 11 26 497 31 485 7.18e-57 196
Msa0687940 MtrunA17_Chr7g0250881 31.155 459 291 7 43 497 62 499 1.09e-55 194
Msa0687940 MtrunA17_Chr4g0066581 28.770 504 317 11 4 501 19 486 6.91e-55 191
Msa0687940 MtrunA17_Chr8g0373181 31.739 460 273 12 50 497 52 482 1.40e-54 190
Msa0687940 MtrunA17_Chr7g0273281 30.040 496 310 9 11 497 25 492 2.78e-54 190
Msa0687940 MtrunA17_Chr2g0286721 26.423 492 322 8 13 498 24 481 3.82e-51 181
Msa0687940 MtrunA17_Chr1g0205681 29.876 482 292 11 43 496 21 484 1.61e-50 180
Msa0687940 MtrunA17_Chr4g0065311 30.526 475 288 11 46 496 22 478 1.04e-49 177
Msa0687940 MtrunA17_Chr1g0205671 29.897 485 291 12 44 499 22 486 2.94e-49 176
Msa0687940 MtrunA17_Chr3g0115711 28.992 476 300 10 44 496 22 482 4.41e-48 173
Msa0687940 MtrunA17_Chr8g0390141 30.998 471 279 12 53 496 34 485 6.16e-48 173
Msa0687940 MtrunA17_Chr6g0486681 29.661 472 284 11 53 496 34 485 7.86e-48 172
Msa0687940 MtrunA17_Chr6g0486671 29.661 472 284 11 53 496 34 485 7.86e-48 172
Msa0687940 MtrunA17_Chr3g0085971 29.668 482 291 13 46 497 22 485 2.19e-47 171
Msa0687940 MtrunA17_Chr5g0394341 29.752 484 290 15 46 499 23 486 7.43e-47 170
Msa0687940 MtrunA17_Chr5g0417611 29.375 480 283 12 53 498 31 488 1.32e-46 169
Msa0687940 MtrunA17_Chr5g0420841 30.000 500 295 15 33 497 6 485 1.38e-46 169
Msa0687940 MtrunA17_Chr6g0486021 28.980 490 319 10 14 497 17 483 2.30e-46 168
Msa0687940 MtrunA17_Chr1g0205691 30.105 475 286 11 53 499 30 486 4.12e-46 168
Msa0687940 MtrunA17_Chr8g0373191 30.556 468 260 14 46 499 40 456 7.86e-46 166
Msa0687940 MtrunA17_Chr3g0115751 27.789 475 304 11 46 496 29 488 1.24e-45 167
Msa0687940 MtrunA17_Chr3g0115741 27.368 475 306 11 46 496 27 486 1.71e-45 166
Msa0687940 MtrunA17_Chr4g0065324 28.842 475 296 9 46 496 30 486 1.88e-45 166
Msa0687940 MtrunA17_Chr4g0004821 29.148 446 285 7 58 497 49 469 2.25e-45 165
Msa0687940 MtrunA17_Chr5g0445601 30.159 504 300 13 19 496 7 484 5.04e-45 165
Msa0687940 MtrunA17_Chr3g0078971 28.512 477 300 10 46 497 24 484 8.44e-45 164
Msa0687940 MtrunA17_Chr3g0128081 28.421 475 292 12 53 497 30 486 3.93e-44 162
Msa0687940 MtrunA17_Chr3g0119401 28.373 504 332 11 1 497 48 529 4.21e-44 163
Msa0687940 MtrunA17_Chr3g0115721 28.921 491 303 13 32 496 13 483 4.40e-44 162
Msa0687940 MtrunA17_Chr8g0390261 28.298 470 293 12 53 496 34 485 1.45e-43 161
Msa0687940 MtrunA17_Chr4g0048411 29.661 472 289 11 53 497 31 486 4.57e-43 160
Msa0687940 MtrunA17_Chr3g0115781 27.651 481 299 13 46 497 26 486 2.28e-42 157
Msa0687940 MtrunA17_Chr1g0164851 28.662 471 293 9 53 497 31 484 5.01e-42 157
Msa0687940 MtrunA17_Chr1g0164871 28.450 471 294 9 53 497 31 484 7.75e-42 156
Msa0687940 MtrunA17_Chr2g0303731 31.343 335 213 6 55 386 36 356 1.33e-41 157
Msa0687940 MtrunA17_Chr2g0303731 41.414 99 58 0 399 497 452 550 1.71e-14 76.3
Msa0687940 MtrunA17_Chr3g0078991 26.947 475 311 10 46 497 24 485 2.78e-41 154
Msa0687940 MtrunA17_Chr2g0303701 33.134 335 204 7 55 386 36 353 3.14e-41 155
Msa0687940 MtrunA17_Chr8g0376601 33.913 345 210 7 46 386 26 356 4.48e-41 155
Msa0687940 MtrunA17_Chr5g0437021 27.381 504 305 14 30 497 6 484 1.72e-40 152
Msa0687940 MtrunA17_Chr3g0128171 27.610 431 272 9 86 497 30 439 2.00e-40 151
Msa0687940 MtrunA17_Chr7g0257631 29.560 477 290 11 46 496 62 518 3.34e-40 152
Msa0687940 MtrunA17_Chr5g0403831 26.253 419 281 7 102 498 81 493 4.00e-39 149
Msa0687940 MtrunA17_Chr3g0078791 29.274 427 250 10 85 496 21 410 9.34e-39 146
Msa0687940 MtrunA17_Chr4g0048051 29.299 471 292 11 53 497 31 486 1.10e-35 139
Msa0687940 MtrunA17_Chr8g0376611 29.617 287 181 4 94 373 4 276 1.69e-34 135
Msa0687940 MtrunA17_Chr8g0376611 35.354 99 64 0 399 497 382 480 3.83e-11 65.5
Msa0687940 MtrunA17_Chr7g0273261 33.621 232 144 5 273 499 10 236 2.64e-34 129
Msa0687940 MtrunA17_Chr8g0376631 30.031 323 207 7 55 373 36 343 1.06e-33 134
Msa0687940 MtrunA17_Chr8g0376631 40.404 99 59 0 399 497 451 549 3.24e-14 75.1
Msa0687940 MtrunA17_Chr3g0121674 31.293 294 182 6 211 496 1 282 3.55e-33 128
Msa0687940 MtrunA17_Chr2g0290181 28.909 339 219 7 55 386 37 360 9.12e-33 131
Msa0687940 MtrunA17_Chr2g0290181 43.000 100 57 0 398 497 454 553 4.42e-15 77.8
Msa0687940 MtrunA17_Chr4g0065351 29.651 344 200 9 171 496 2 321 1.68e-27 113
Msa0687940 MtrunA17_Chr2g0290161 29.137 278 157 5 114 386 25 267 1.10e-26 112
Msa0687940 MtrunA17_Chr2g0290161 41.000 100 59 0 398 497 361 460 1.95e-11 66.2
Msa0687940 MtrunA17_Chr3g0115731 26.008 496 290 18 32 496 13 462 3.46e-26 111
Msa0687940 MtrunA17_Chr5g0404191 31.727 249 146 7 38 286 44 268 1.06e-22 98.6
Msa0687940 MtrunA17_Chr3g0146061 28.464 267 175 6 245 496 458 723 1.27e-21 98.6
Msa0687940 MtrunA17_Chr3g0146061 34.146 164 104 3 92 251 46 209 6.16e-16 80.9
Msa0687940 MtrunA17_Chr3g0144261 30.374 214 138 4 42 251 1 207 1.50e-20 95.5
Msa0687940 MtrunA17_Chr3g0144261 33.654 208 126 5 301 496 506 713 5.39e-20 93.6
Msa0687940 MtrunA17_Chr5g0434231 30.065 153 83 1 94 246 7 135 7.12e-20 86.3
Msa0687940 MtrunA17_Chr5g0407441 32.212 208 120 7 54 251 13 209 1.86e-19 92.0
Msa0687940 MtrunA17_Chr5g0407441 31.100 209 130 4 301 496 498 705 4.57e-15 78.2
Msa0687940 MtrunA17_Chr5g0419321 32.143 168 102 4 92 251 74 237 1.65e-18 89.0
Msa0687940 MtrunA17_Chr5g0419321 29.327 208 135 3 301 496 524 731 1.53e-14 76.6
Msa0687940 MtrunA17_Chr8g0370141 29.661 236 140 6 53 286 12 223 2.15e-17 84.0
Msa0687940 MtrunA17_Chr8g0370151 30.622 209 131 3 301 496 137 344 4.96e-17 82.8
Msa0687940 MtrunA17_Chr7g0273271 29.688 192 121 3 46 236 28 206 4.55e-16 77.0
Msa0687940 MtrunA17_Chr5g0446681 33.094 139 70 1 53 191 30 145 7.51e-15 75.1
Msa0687940 MtrunA17_Chr5g0404181 39.000 100 60 1 398 497 30 128 2.05e-13 67.4
Msa0687940 MtrunA17_Chr2g0319001 24.312 436 266 19 87 495 119 517 5.14e-12 68.2
Msa0687940 MtrunA17_Chr5g0434251 35.354 99 64 0 399 497 38 136 6.78e-12 63.5
Msa0687940 MtrunA17_Chr4g0042131 23.747 379 259 11 114 488 50 402 2.94e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0687940 AT5G17010.1 72.565 503 136 2 1 501 1 503 0.0 750
Msa0687940 AT5G17010.3 72.565 503 136 2 1 501 1 503 0.0 750
Msa0687940 AT5G17010.4 72.565 503 136 2 1 501 1 503 0.0 750
Msa0687940 AT3G03090.1 66.998 503 164 1 1 501 1 503 0.0 697
Msa0687940 AT5G59250.1 62.179 468 174 2 37 501 90 557 0.0 585
Msa0687940 AT5G17010.2 57.708 506 143 6 1 501 1 440 0.0 554
Msa0687940 AT3G18830.1 30.572 507 315 8 5 497 12 495 1.51e-71 237
Msa0687940 AT4G36670.1 31.535 482 295 8 36 498 12 477 6.72e-69 229
Msa0687940 AT5G27360.1 32.927 492 288 11 16 498 8 466 4.23e-67 224
Msa0687940 AT5G27360.3 32.724 492 289 11 16 498 56 514 1.02e-66 224
Msa0687940 AT2G20780.1 31.014 503 300 12 11 497 26 497 2.04e-66 223
Msa0687940 AT2G16130.1 30.876 502 314 7 14 498 2 487 2.17e-64 218
Msa0687940 AT2G16120.1 31.311 511 298 10 14 497 2 486 3.43e-64 217
Msa0687940 AT2G18480.1 32.244 459 277 9 59 497 36 480 2.44e-63 214
Msa0687940 AT5G27350.1 30.204 490 303 10 15 497 4 461 1.87e-62 211
Msa0687940 AT3G05150.1 30.691 492 301 12 18 498 5 467 2.62e-62 211
Msa0687940 AT3G05150.3 30.691 492 301 12 18 498 5 467 2.62e-62 211
Msa0687940 AT2G20780.2 33.174 419 253 8 89 497 38 439 3.11e-62 211
Msa0687940 AT3G05150.2 30.691 492 301 12 18 498 5 467 3.69e-62 211
Msa0687940 AT3G05165.3 31.211 487 296 11 22 499 6 462 1.26e-61 209
Msa0687940 AT3G05165.2 31.211 487 296 11 22 499 6 462 1.26e-61 209
Msa0687940 AT3G05165.1 31.211 487 296 11 22 499 6 462 1.26e-61 209
Msa0687940 AT3G05160.1 31.185 481 294 10 27 499 2 453 9.06e-59 201
Msa0687940 AT2G43330.1 32.969 458 270 8 55 497 41 476 1.78e-58 202
Msa0687940 AT3G05160.3 33.005 406 243 8 101 499 21 404 1.07e-57 197
Msa0687940 AT3G05160.2 33.005 406 243 8 101 499 21 404 1.07e-57 197
Msa0687940 AT5G27360.2 33.938 386 224 8 122 499 1 363 1.09e-57 196
Msa0687940 AT5G27360.5 33.938 386 224 8 122 499 1 363 1.09e-57 196
Msa0687940 AT2G48020.2 30.833 480 295 11 27 498 9 459 1.09e-56 196
Msa0687940 AT2G48020.1 30.833 480 295 11 27 498 9 459 1.09e-56 196
Msa0687940 AT5G18840.1 28.543 494 316 9 15 498 10 476 3.80e-56 195
Msa0687940 AT3G19940.1 31.524 479 281 11 46 496 26 485 9.34e-55 192
Msa0687940 AT5G16150.2 32.251 462 282 10 43 497 102 539 4.11e-54 191
Msa0687940 AT5G16150.1 32.251 462 282 10 43 497 102 539 4.11e-54 191
Msa0687940 AT5G16150.3 32.251 462 282 10 43 497 102 539 4.11e-54 191
Msa0687940 AT1G54730.2 30.155 451 277 10 55 497 42 462 5.17e-54 189
Msa0687940 AT1G08930.1 27.800 500 318 10 8 498 24 489 7.44e-54 189
Msa0687940 AT1G08930.2 27.800 500 318 10 8 498 24 489 7.44e-54 189
Msa0687940 AT1G50310.1 31.070 486 275 12 46 496 26 486 1.38e-52 186
Msa0687940 AT4G02050.2 30.309 485 292 11 38 496 20 484 6.17e-51 181
Msa0687940 AT4G02050.1 30.309 485 292 11 38 496 20 484 6.17e-51 181
Msa0687940 AT5G23270.1 30.146 481 273 13 53 496 32 486 7.03e-51 181
Msa0687940 AT3G05165.6 29.783 460 283 11 22 470 6 436 1.31e-49 178
Msa0687940 AT1G19450.1 30.658 486 295 14 25 498 30 485 6.36e-49 176
Msa0687940 AT3G05165.4 29.372 446 279 9 22 459 6 423 1.36e-48 174
Msa0687940 AT3G05165.5 29.372 446 279 9 22 459 6 423 1.36e-48 174
Msa0687940 AT1G75220.1 29.132 484 305 10 25 498 29 484 5.23e-48 173
Msa0687940 AT1G67300.2 29.778 450 280 7 58 497 64 487 5.95e-48 173
Msa0687940 AT1G79820.2 30.580 448 278 9 57 497 66 487 1.33e-47 172
Msa0687940 AT1G79820.1 30.580 448 278 9 57 497 66 487 1.33e-47 172
Msa0687940 AT5G26340.1 29.253 482 295 12 46 499 24 487 4.62e-47 171
Msa0687940 AT1G67300.1 29.399 449 282 7 58 497 64 486 5.27e-47 170
Msa0687940 AT1G67300.3 29.399 449 282 7 58 497 64 486 5.27e-47 170
Msa0687940 AT1G77210.2 30.462 476 275 13 53 496 34 485 1.33e-46 169
Msa0687940 AT1G77210.1 30.462 476 275 13 53 496 34 485 1.33e-46 169
Msa0687940 AT1G11260.1 28.875 471 292 10 53 496 31 485 4.25e-46 169
Msa0687940 AT3G05155.1 27.719 469 296 11 43 499 20 457 1.03e-44 163
Msa0687940 AT5G27360.4 30.986 426 253 10 16 432 8 401 1.64e-44 162
Msa0687940 AT1G08900.5 29.524 420 269 8 86 499 17 415 1.74e-44 162
Msa0687940 AT1G08900.1 29.452 438 281 9 69 499 41 457 2.08e-44 162
Msa0687940 AT1G08900.2 29.452 438 281 9 69 499 41 457 2.08e-44 162
Msa0687940 AT1G05030.1 28.319 452 293 7 53 497 87 514 2.45e-44 164
Msa0687940 AT1G54730.5 28.000 450 267 10 55 497 42 441 2.63e-44 162
Msa0687940 AT1G08900.3 29.286 420 270 8 86 499 51 449 3.44e-44 162
Msa0687940 AT1G54730.3 28.979 421 262 9 55 467 42 433 5.29e-44 161
Msa0687940 AT3G05400.1 28.539 445 284 9 59 497 40 456 9.47e-43 158
Msa0687940 AT1G08890.1 28.337 487 307 12 22 497 2 457 1.41e-42 157
Msa0687940 AT3G19930.1 26.789 489 308 9 39 497 16 484 1.86e-42 158
Msa0687940 AT3G19930.2 26.789 489 308 9 39 497 16 484 1.86e-42 158
Msa0687940 AT3G05960.1 28.151 476 286 11 53 497 29 479 2.28e-42 158
Msa0687940 AT1G34580.1 28.425 489 307 11 36 496 14 487 1.16e-41 156
Msa0687940 AT1G05030.2 28.504 421 275 6 84 497 61 462 1.24e-41 155
Msa0687940 AT4G04750.1 27.778 504 316 14 6 498 3 469 2.51e-41 154
Msa0687940 AT4G04750.2 27.778 504 316 14 6 498 3 469 2.51e-41 154
Msa0687940 AT4G21480.1 28.814 472 291 9 53 497 31 484 2.60e-41 155
Msa0687940 AT1G30220.1 32.258 372 223 9 34 390 6 363 4.25e-41 155
Msa0687940 AT1G30220.1 38.462 104 64 0 394 497 450 553 1.41e-13 73.6
Msa0687940 AT4G04750.3 28.233 464 291 12 46 498 81 513 4.84e-41 154
Msa0687940 AT5G26250.1 28.723 470 291 12 53 497 30 480 1.08e-40 153
Msa0687940 AT3G20460.1 26.087 506 333 11 1 498 12 484 2.43e-40 152
Msa0687940 AT1G08920.1 26.566 463 296 9 50 499 33 464 2.59e-40 152
Msa0687940 AT1G07340.1 27.950 483 283 13 53 499 31 484 5.73e-40 151
Msa0687940 AT4G04760.1 27.056 462 300 10 46 498 32 465 2.95e-39 149
Msa0687940 AT1G34580.2 29.496 417 263 9 96 496 36 437 5.31e-39 147
Msa0687940 AT1G67300.6 28.218 404 253 8 58 450 64 441 1.15e-38 147
Msa0687940 AT1G67300.7 28.218 404 253 8 58 450 64 441 1.15e-38 147
Msa0687940 AT1G79820.4 29.873 395 244 9 57 444 66 434 2.04e-38 146
Msa0687940 AT1G08920.2 26.170 470 296 10 50 499 33 471 2.42e-38 146
Msa0687940 AT1G67300.4 28.316 392 246 7 58 440 64 429 2.95e-38 145
Msa0687940 AT1G67300.5 28.316 392 246 7 58 440 64 429 2.95e-38 145
Msa0687940 AT4G04760.3 27.764 407 264 9 101 498 21 406 3.11e-38 145
Msa0687940 AT3G05400.2 26.966 445 271 10 59 497 40 436 1.09e-36 141
Msa0687940 AT2G35740.1 30.058 346 228 7 55 397 36 370 1.11e-36 143
Msa0687940 AT2G35740.1 39.394 99 60 0 399 497 458 556 3.25e-13 72.4
Msa0687940 AT1G54730.9 28.684 380 234 9 55 426 42 392 7.93e-36 138
Msa0687940 AT1G54730.7 28.684 380 234 9 55 426 42 392 7.93e-36 138
Msa0687940 AT4G04760.2 26.652 469 290 12 46 498 32 462 3.70e-35 137
Msa0687940 AT5G61520.1 27.021 470 303 10 53 496 32 487 7.42e-35 137
Msa0687940 AT1G54730.4 26.667 420 252 9 55 467 42 412 1.46e-34 134
Msa0687940 AT4G16480.2 29.345 351 210 7 55 390 37 364 2.43e-34 136
Msa0687940 AT4G16480.2 41.414 99 58 0 399 497 459 557 1.64e-14 76.6
Msa0687940 AT4G16480.3 29.345 351 210 7 55 390 37 364 2.43e-34 136
Msa0687940 AT4G16480.3 41.414 99 58 0 399 497 459 557 1.64e-14 76.6
Msa0687940 AT4G16480.1 29.345 351 210 7 55 390 37 364 2.43e-34 136
Msa0687940 AT4G16480.1 41.414 99 58 0 399 497 459 557 1.64e-14 76.6
Msa0687940 AT2G48020.4 28.866 388 240 10 27 406 9 368 2.44e-34 133
Msa0687940 AT1G50310.2 30.748 361 203 10 158 496 8 343 7.26e-34 132
Msa0687940 AT5G61520.2 27.711 415 275 10 93 496 39 439 7.46e-34 133
Msa0687940 AT1G08900.4 27.919 394 257 8 69 455 41 414 8.78e-33 130
Msa0687940 AT1G77210.3 31.006 358 204 12 158 496 3 336 1.90e-31 124
Msa0687940 AT2G48020.3 28.653 349 219 8 27 373 9 329 9.02e-31 122
Msa0687940 AT1G08920.3 24.242 429 282 8 50 465 33 431 1.06e-29 121
Msa0687940 AT1G54730.11 29.283 321 196 8 55 373 42 333 7.78e-29 117
Msa0687940 AT3G05155.2 28.274 336 206 9 43 373 20 325 8.98e-28 114
Msa0687940 AT1G54730.8 26.121 379 224 9 55 426 42 371 1.33e-26 111
Msa0687940 AT1G54730.10 28.975 283 176 6 55 336 42 300 7.62e-24 102
Msa0687940 AT1G54730.6 28.975 283 176 6 55 336 42 300 7.62e-24 102
Msa0687940 AT1G20840.2 33.482 224 131 5 42 263 1 208 9.45e-22 99.4
Msa0687940 AT1G20840.2 31.731 208 130 3 301 496 508 715 1.82e-17 86.3
Msa0687940 AT1G20840.1 33.482 224 131 5 42 263 1 208 9.45e-22 99.4
Msa0687940 AT1G20840.1 31.731 208 130 3 301 496 508 715 1.82e-17 86.3
Msa0687940 AT4G35300.4 34.634 205 117 7 55 251 14 209 2.20e-19 92.0
Msa0687940 AT4G35300.4 32.212 208 129 3 301 496 515 722 6.68e-19 90.5
Msa0687940 AT4G35300.8 34.634 205 117 7 55 251 14 209 2.20e-19 92.0
Msa0687940 AT4G35300.8 32.212 208 129 3 301 496 515 722 6.68e-19 90.5
Msa0687940 AT4G35300.6 34.634 205 117 7 55 251 14 209 2.20e-19 92.0
Msa0687940 AT4G35300.6 32.212 208 129 3 301 496 515 722 6.68e-19 90.5
Msa0687940 AT4G35300.11 34.634 205 117 7 55 251 14 209 2.20e-19 92.0
Msa0687940 AT4G35300.11 32.212 208 129 3 301 496 515 722 6.68e-19 90.5
Msa0687940 AT4G35300.1 34.634 205 117 7 55 251 14 209 2.20e-19 92.0
Msa0687940 AT4G35300.1 32.212 208 129 3 301 496 515 722 6.68e-19 90.5
Msa0687940 AT4G35300.10 34.634 205 117 7 55 251 14 209 2.20e-19 92.0
Msa0687940 AT4G35300.10 32.212 208 129 3 301 496 515 722 6.68e-19 90.5
Msa0687940 AT4G35300.7 34.634 205 117 7 55 251 14 209 2.20e-19 92.0
Msa0687940 AT4G35300.7 32.212 208 129 3 301 496 515 722 6.68e-19 90.5
Msa0687940 AT4G35300.9 34.634 205 117 7 55 251 14 209 2.34e-19 92.0
Msa0687940 AT4G35300.9 32.212 208 129 2 301 496 505 712 6.26e-19 90.9
Msa0687940 AT4G35300.2 34.634 205 117 7 55 251 14 209 2.34e-19 92.0
Msa0687940 AT4G35300.2 32.212 208 129 2 301 496 505 712 6.26e-19 90.9
Msa0687940 AT4G35300.3 34.634 205 117 7 55 251 14 209 2.34e-19 92.0
Msa0687940 AT4G35300.3 32.212 208 129 2 301 496 505 712 6.26e-19 90.9
Msa0687940 AT4G35300.5 32.212 208 129 3 301 496 318 525 4.83e-19 90.5
Msa0687940 AT3G51490.1 31.193 218 133 7 42 251 1 209 2.61e-18 88.6
Msa0687940 AT3G51490.1 28.302 212 138 4 294 496 502 708 1.01e-15 80.5
Msa0687940 AT3G51490.2 31.193 218 133 7 42 251 1 209 2.75e-18 88.6
Msa0687940 AT3G51490.2 28.372 215 142 4 294 496 502 716 5.34e-18 87.8
Msa0687940 AT3G51490.3 28.372 215 142 4 294 496 452 666 3.45e-18 88.2
Msa0687940 AT3G51490.3 33.962 159 99 4 98 251 2 159 1.92e-16 82.8
Msa0687940 AT1G79820.3 31.522 184 119 2 57 239 66 243 8.48e-17 83.2
Msa0687940 AT1G79820.3 35.802 162 101 1 339 497 278 439 2.28e-16 82.0
Msa0687940 AT1G79820.5 35.802 162 101 1 339 497 216 377 4.52e-16 80.5

Find 143 sgRNAs with CRISPR-Local

Find 468 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTGTAAGCCCCTTGGTTTC+TGG 0.113255 4_4:+52975376 None:intergenic
TTTACGTGCTATACAGAAAA+AGG 0.163557 4_4:-52977161 Msa0687940:CDS
TTACTACTTGGCGGAGTTTC+AGG 0.164053 4_4:-52976283 Msa0687940:CDS
TATTCTCCTTGGTGTATTTA+AGG 0.200907 4_4:-52976641 Msa0687940:intron
GGTAATCTCATTATTCTTAC+TGG 0.215288 4_4:-52976088 Msa0687940:CDS
AGATTTCTCTTCCCAGCTTT+TGG 0.224004 4_4:-52980165 Msa0687940:CDS
TTCAATATTGCTGATTTCTT+AGG 0.227293 4_4:-52978645 Msa0687940:intron
TCATTATATGGTGCCTTAAT+AGG 0.228572 4_4:-52978681 Msa0687940:CDS
CATTAAGTAATAATGAATTT+AGG 0.255300 4_4:-52975219 Msa0687940:three_prime_UTR
GACTTAGACGCTGTTGAAAT+TGG 0.258547 4_4:-52978863 Msa0687940:CDS
GAAAGGGAGCCTCTGCTTAA+TGG 0.270346 4_4:-52981412 Msa0687940:CDS
CTCTACTTTACAGGATTTAC+TGG 0.274020 4_4:-52975470 Msa0687940:intron
AAAGAGTTCTTTATAGTAAT+CGG 0.294855 4_4:-52977525 Msa0687940:CDS
TTTATTGGTGATTGGGAGAT+TGG 0.298663 4_4:-52978462 Msa0687940:CDS
GTGATTGGGAGATTGGTATT+TGG 0.307535 4_4:-52978455 Msa0687940:CDS
GCTCTATGTTGGTTGTTATC+AGG 0.308785 4_4:-52976010 Msa0687940:intron
TAGTGCAACAATTTCCATTC+AGG 0.310363 4_4:-52980106 Msa0687940:intron
ATCACCAATAAAGGAAAATT+AGG 0.310660 4_4:+52978473 None:intergenic
TAGTCCTGTTGCAGTAATAA+TGG 0.310720 4_4:-52977227 Msa0687940:CDS
TTGGTATTTGGCATAGGAAT+TGG 0.315973 4_4:-52978443 Msa0687940:CDS
CACAATTTCGTTACCTTCAG+TGG 0.329961 4_4:+52975700 None:intergenic
CTACTATTTGGATATGATAT+TGG 0.335588 4_4:-52980138 Msa0687940:CDS
GTTGCAGTAATAATGGGATT+TGG 0.338250 4_4:-52977220 Msa0687940:CDS
CAGACTAGCGGATCATTATA+TGG 0.341799 4_4:-52978693 Msa0687940:CDS
AATCTCCCAATCACCAATAA+AGG 0.355733 4_4:+52978464 None:intergenic
GGGTTCGTATTACATATTCT+TGG 0.359010 4_4:-52976067 Msa0687940:CDS
GAAGAAAATGATGTTACCTT+AGG 0.368047 4_4:-52977016 Msa0687940:CDS
TCAGCAAGTAGATGAGATTA+TGG 0.386547 4_4:-52977059 Msa0687940:CDS
GGCCAACACAGAGCCTATTA+AGG 0.394009 4_4:+52978668 None:intergenic
CGTAGTTTGTGCCAGCTTCA+AGG 0.400533 4_4:-52977106 Msa0687940:CDS
AGTATCCACCTTGGAGAAGC+TGG 0.401630 4_4:+52977184 None:intergenic
TCAGATTTCCTTTGGTCCGA+TGG 0.401941 4_4:-52975833 Msa0687940:intron
CGTTACCTTCAGTGGGGAAA+AGG 0.405272 4_4:+52975708 None:intergenic
AAGAAAATGATGTTACCTTA+GGG 0.418967 4_4:-52977015 Msa0687940:CDS
TTGTCTGTTTACTACGGGAT+TGG 0.420400 4_4:-52975182 Msa0687940:three_prime_UTR
AATCCCATTATTACTGCAAC+AGG 0.420607 4_4:+52977223 None:intergenic
GCTGGATGGCGGTATATGTT+TGG 0.420780 4_4:-52977256 Msa0687940:CDS
CCTCTGCTTAATGGAATTCA+TGG 0.423680 4_4:-52981403 Msa0687940:CDS
GCAGCAGTTCTTGCTGTAGT+TGG 0.435391 4_4:-52976039 Msa0687940:CDS
AGTCCTGTTGCAGTAATAAT+GGG 0.436387 4_4:-52977226 Msa0687940:CDS
AGGATTGGTCTTGTTTCAAC+AGG 0.437529 4_4:-52976948 Msa0687940:intron
CCCACTTTCCTCTTTCTCAC+AGG 0.444967 4_4:-52982329 Msa0687940:intron
GGAAGGAGACCTTTACTACT+TGG 0.445419 4_4:-52976295 Msa0687940:CDS
TTGTTGGTAGACACTGTTGC+TGG 0.445619 4_4:-52977274 Msa0687940:CDS
GTAACAAGGTGACAGATTAC+AGG 0.446359 4_4:+52975332 None:intergenic
CAGATTTCCTTTGGTCCGAT+GGG 0.447732 4_4:-52975832 Msa0687940:CDS
TTTACTACGGGATTGGATCA+TGG 0.449191 4_4:-52975175 Msa0687940:three_prime_UTR
TAAGAAATCAGCAATATTGA+AGG 0.456894 4_4:+52978647 None:intergenic
TTCCTCTAGTGTAAGCCCCT+TGG 0.456973 4_4:+52975369 None:intergenic
AATAGTAGACCACCAAAAGC+TGG 0.457373 4_4:+52980153 None:intergenic
TTTCCTTTGGTCCGATGGGT+TGG 0.457492 4_4:-52975828 Msa0687940:CDS
TAGGAGCGAATGCTGTTATG+AGG 0.458082 4_4:+52978492 None:intergenic
AGTAGAATGGTTTACCTGAA+TGG 0.459349 4_4:+52980092 None:intergenic
ACCCGGGTCTCTATTCTCCT+TGG 0.463268 4_4:-52976652 Msa0687940:CDS
GCTGCATTGATGTATCTTGT+TGG 0.463538 4_4:-52978518 Msa0687940:CDS
TTGTTGTAGTTGATTATGAC+TGG 0.472079 4_4:-52976346 Msa0687940:intron
CAGAGAGGGAATAGTCTTGA+GGG 0.472291 4_4:+52981380 None:intergenic
CCTTAGCAGCTGATGCTACC+CGG 0.472741 4_4:-52976669 Msa0687940:CDS
TCCTTTGCCTCTCAAGCGTA+AGG 0.476886 4_4:+52975783 None:intergenic
GTTGGTTTGCTGCTCTATGT+TGG 0.484746 4_4:-52976021 Msa0687940:CDS
TTACAGGATTTACTGGGAGC+AGG 0.487811 4_4:-52975463 Msa0687940:intron
CGGAAGAATTGCAGCAGAGA+GGG 0.489200 4_4:+52981366 None:intergenic
CCCTTACGCTTGAGAGGCAA+AGG 0.490580 4_4:-52975784 Msa0687940:CDS
AATTAAATTTGGTAGAGTGC+AGG 0.496012 4_4:-52976697 Msa0687940:intron
CCTTGTGATAAGTGCAGGAT+TGG 0.497659 4_4:-52976963 Msa0687940:CDS
GGGAGATTGGTATTTGGCAT+AGG 0.499768 4_4:-52978449 Msa0687940:CDS
ATATAACATTACAGATACAT+TGG 0.499894 4_4:+52975264 None:intergenic
CCGGGTAGCATCAGCTGCTA+AGG 0.501542 4_4:+52976669 None:intergenic
GTATGGACTAGGTAGCTTGT+TGG 0.505077 4_4:-52977290 Msa0687940:CDS
TCCACGAAACATTTCCCCTA+AGG 0.509338 4_4:+52977000 None:intergenic
GAGACTAGTTGTCCACGTAT+TGG 0.510388 4_4:+52977552 None:intergenic
GGGAAAAGGCAAATGTAACC+AGG 0.512818 4_4:+52975722 None:intergenic
CATCACTAAGTGGAATAACT+TGG 0.514103 4_4:-52978889 Msa0687940:CDS
GAAACTCCGCCAAGTAGTAA+AGG 0.514823 4_4:+52976286 None:intergenic
TGCAAACTGTGACAGATCAC+GGG 0.514877 4_4:-52976851 Msa0687940:intron
GTATGTGTGCAGGCCGGGTA+TGG 0.515824 4_4:-52977307 Msa0687940:intron
CTCCCTTTCACTTGTAACCT+CGG 0.517985 4_4:+52981426 None:intergenic
GTAATCTCATTATTCTTACT+GGG 0.518713 4_4:-52976087 Msa0687940:CDS
CACCAAGGAGAATAGAGACC+CGG 0.519401 4_4:+52976650 None:intergenic
GTGCAGGCCGGGTATGGACT+AGG 0.520250 4_4:-52977301 Msa0687940:intron
ACAATTTCGTTACCTTCAGT+GGG 0.521381 4_4:+52975701 None:intergenic
TACTATAAACACATTTATAG+AGG 0.522616 4_4:+52975310 None:intergenic
GAAATGTAGGACCTTGAAGC+TGG 0.527180 4_4:+52977095 None:intergenic
GAAGCAGAATCATGAAATGT+AGG 0.529348 4_4:+52977082 None:intergenic
ACCTTAGGGGAAATGTTTCG+TGG 0.531092 4_4:-52977001 Msa0687940:CDS
CCTGTGAGAAAGAGGAAAGT+GGG 0.532659 4_4:+52982329 None:intergenic
AAGGCCCTTGTGATAAGTGC+AGG 0.536243 4_4:-52976968 Msa0687940:CDS
CACCGAGGTTACAAGTGAAA+GGG 0.537213 4_4:-52981428 Msa0687940:CDS
TAATAATGGGATTTGGAATG+TGG 0.538557 4_4:-52977213 Msa0687940:CDS
AGTTGTCCACGTATTGGCGT+TGG 0.540531 4_4:+52977558 None:intergenic
CTACGCCGCATCAATCCTAC+AGG 0.541755 4_4:-52976810 Msa0687940:intron
TTGCAGTCACCATCACTAAG+TGG 0.543117 4_4:-52978899 Msa0687940:intron
CCACCGAGGTTACAAGTGAA+AGG 0.547623 4_4:-52981429 Msa0687940:CDS
GAGGTGAACCTGTGAGAAAG+AGG 0.553528 4_4:+52982321 None:intergenic
GGTGGCTTCCAGCTTCTCCA+AGG 0.556238 4_4:-52977192 Msa0687940:CDS
GCTGTCTCTGCAATGTACAT+TGG 0.561804 4_4:+52977582 None:intergenic
CTTAGCAGCTGATGCTACCC+GGG 0.569831 4_4:-52976668 Msa0687940:CDS
TCTACTTTACAGGATTTACT+GGG 0.572981 4_4:-52975469 Msa0687940:intron
ATTTGGCATAGGAATTGGAC+TGG 0.574571 4_4:-52978438 Msa0687940:intron
GTTGTCGTTGTTGACAGACT+TGG 0.575922 4_4:-52976316 Msa0687940:CDS
GGCTTCCAGCTTCTCCAAGG+TGG 0.576554 4_4:-52977189 Msa0687940:CDS
AACCAAGGGGCTTACACTAG+AGG 0.577868 4_4:-52975371 Msa0687940:CDS
ATAGTAGACCACCAAAAGCT+GGG 0.579819 4_4:+52980154 None:intergenic
CCAATCCTGCACTTATCACA+AGG 0.580382 4_4:+52976963 None:intergenic
GCAGAGAGGGAATAGTCTTG+AGG 0.588966 4_4:+52981379 None:intergenic
ACCTGTGAGAAAGAGGAAAG+TGG 0.589413 4_4:+52982328 None:intergenic
CAAGTTATTCCACTTAGTGA+TGG 0.590208 4_4:+52978890 None:intergenic
AAGCCAACCCATCGGACCAA+AGG 0.590961 4_4:+52975825 None:intergenic
AGGAGACCTTTACTACTTGG+CGG 0.596332 4_4:-52976292 Msa0687940:CDS
GCGGCGTAGTAGAGAACACT+TGG 0.601819 4_4:+52976824 None:intergenic
TGCCTTAATAGGCTCTGTGT+TGG 0.602581 4_4:-52978670 Msa0687940:CDS
CTTCATTGTACCAGAAACCA+AGG 0.608838 4_4:-52975386 Msa0687940:CDS
CCTTTGCCTCTCAAGCGTAA+GGG 0.610550 4_4:+52975784 None:intergenic
AAATGTTTCGTGGAAAATGT+CGG 0.619683 4_4:-52976991 Msa0687940:CDS
CAAGCTACCTAGTCCATACC+CGG 0.621967 4_4:+52977294 None:intergenic
AGGAGCGAATGCTGTTATGA+GGG 0.624609 4_4:+52978493 None:intergenic
GCACGTAAAAGTATCCACCT+TGG 0.625472 4_4:+52977175 None:intergenic
TGGTAGACACTGTTGCTGGA+TGG 0.626797 4_4:-52977270 Msa0687940:CDS
GTAGTTGATTATGACTGGAG+TGG 0.632194 4_4:-52976341 Msa0687940:intron
TAATGGGATTTGGAATGTGG+TGG 0.633278 4_4:-52977210 Msa0687940:CDS
TTCATTGTACCAGAAACCAA+GGG 0.637151 4_4:-52975385 Msa0687940:CDS
CCTTTCACTTGTAACCTCGG+TGG 0.640227 4_4:+52981429 None:intergenic
TCGTTGTTGACAGACTTGGA+AGG 0.641778 4_4:-52976312 Msa0687940:CDS
CTGTGAGAAAGAGGAAAGTG+GGG 0.641932 4_4:+52982330 None:intergenic
GTTTCGTGGAAAATGTCGGA+AGG 0.645463 4_4:-52976987 Msa0687940:CDS
ACAGCTCCAACGCCAATACG+TGG 0.658764 4_4:-52977564 Msa0687940:CDS
GGAAATTGTTGCACTAGATG+TGG 0.659777 4_4:+52980113 None:intergenic
ACGGAAGAATTGCAGCAGAG+AGG 0.661838 4_4:+52981365 None:intergenic
GCTATCATAAGCCAACCCAT+CGG 0.662767 4_4:+52975817 None:intergenic
ACCAAGGAGAATAGAGACCC+GGG 0.664447 4_4:+52976651 None:intergenic
CCATGAATTCCATTAAGCAG+AGG 0.665607 4_4:+52981403 None:intergenic
ACACATTTATAGAGGTAACA+AGG 0.672653 4_4:+52975318 None:intergenic
TAACACCTGTAGGATTGATG+CGG 0.685551 4_4:+52976805 None:intergenic
CAATTTCGTTACCTTCAGTG+GGG 0.693048 4_4:+52975702 None:intergenic
AGAAAATGATGTTACCTTAG+GGG 0.697514 4_4:-52977014 Msa0687940:CDS
TAGACACTGTTGCTGGATGG+CGG 0.699815 4_4:-52977267 Msa0687940:CDS
AATCTACCTTAAATACACCA+AGG 0.704025 4_4:+52976635 None:intergenic
GGAAAAGGCAAATGTAACCA+GGG 0.704101 4_4:+52975723 None:intergenic
TCATTGTACCAGAAACCAAG+GGG 0.704520 4_4:-52975384 Msa0687940:CDS
CAATCCTGCACTTATCACAA+GGG 0.713845 4_4:+52976964 None:intergenic
TGTGAGAAAGAGGAAAGTGG+GGG 0.728502 4_4:+52982331 None:intergenic
GCAAACTGTGACAGATCACG+GGG 0.731321 4_4:-52976850 Msa0687940:intron
GGAAGGAAAGTCATCCACCG+AGG 0.774777 4_4:-52981443 Msa0687940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGATATTTTTATAAAAACTT+AGG - chr4_4:52979501-52979520 Msa0687940:intron 10.0%
!! TATTATTATCCAATTAAATT+TGG - chr4_4:52980806-52980825 Msa0687940:intron 10.0%
!!! TGATAGATTTTTAAAATATA+TGG + chr4_4:52981849-52981868 None:intergenic 10.0%
!! TGATATTTGATTGAAAATTA+TGG - chr4_4:52975756-52975775 Msa0687940:CDS 15.0%
!!! TGTTTTAACAGAAATAAATA+TGG + chr4_4:52976237-52976256 None:intergenic 15.0%
!! AACAAAATATTATCATTTCA+TGG + chr4_4:52976596-52976615 None:intergenic 15.0%
!!! AGATTTTTTAAACATGTTTT+AGG + chr4_4:52977328-52977347 None:intergenic 15.0%
!! TCATATTATATTGAAGTATA+TGG + chr4_4:52977619-52977638 None:intergenic 15.0%
!! GTAAGTTTAAATTAAATTCT+TGG - chr4_4:52978681-52978700 Msa0687940:CDS 15.0%
!!! AATAGTTTCAACAATTTTTT+TGG - chr4_4:52979785-52979804 Msa0687940:intron 15.0%
!!! TGTTATGTTAATTTTAATCA+AGG - chr4_4:52980727-52980746 Msa0687940:intron 15.0%
!! AACTTAGATAATTATATAAG+AGG - chr4_4:52981329-52981348 Msa0687940:intron 15.0%
!! TGAAAAATAAAATCACTAAA+TGG + chr4_4:52981664-52981683 None:intergenic 15.0%
!! CATTAAGTAATAATGAATTT+AGG - chr4_4:52982295-52982314 Msa0687940:intron 15.0%
!! GATATATAAAACTCAAATTG+AGG + chr4_4:52975257-52975276 None:intergenic 20.0%
!! AGAAAGAAAAAAAACTGTAT+TGG - chr4_4:52975318-52975337 Msa0687940:three_prime_UTR 20.0%
!! GAAAGAAAAAAAACTGTATT+GGG - chr4_4:52975319-52975338 Msa0687940:three_prime_UTR 20.0%
!! TGAAATTATGAAAGCTTAAA+AGG - chr4_4:52975357-52975376 Msa0687940:CDS 20.0%
!! GAAATTATGAAAGCTTAAAA+GGG - chr4_4:52975358-52975377 Msa0687940:CDS 20.0%
!! AAATTATGAAAGCTTAAAAG+GGG - chr4_4:52975359-52975378 Msa0687940:CDS 20.0%
!! CTCTAATTTCATTGATAAAT+AGG + chr4_4:52975567-52975586 None:intergenic 20.0%
!!! ATTTCTCTTATAGTTTTTAC+AGG + chr4_4:52975693-52975712 None:intergenic 20.0%
!! AAAACTATAAATTAATGAGC+TGG - chr4_4:52975724-52975743 Msa0687940:CDS 20.0%
!!! ACTAATTTGTTGTTATCTTT+TGG - chr4_4:52976003-52976022 Msa0687940:intron 20.0%
!! ACTAAATATCTTCAAAATGA+TGG + chr4_4:52976694-52976713 None:intergenic 20.0%
!!! ATTTTCTTTTTAAAGAAGTG+AGG + chr4_4:52977240-52977259 None:intergenic 20.0%
!! AAGACGATGAAATATAAAAT+AGG - chr4_4:52977283-52977302 Msa0687940:CDS 20.0%
!! ATTAATACAAGTAATGATCA+TGG + chr4_4:52977642-52977661 None:intergenic 20.0%
!! AAATCATTCATAACAAAAAC+TGG + chr4_4:52977879-52977898 None:intergenic 20.0%
!!! TTTTGTTATGAATGATTTGT+TGG - chr4_4:52977881-52977900 Msa0687940:intron 20.0%
!!! TTTGTTATGAATGATTTGTT+GGG - chr4_4:52977882-52977901 Msa0687940:intron 20.0%
!! TTTGAGAAATAAATAAGTTC+TGG + chr4_4:52978216-52978235 None:intergenic 20.0%
!! TATACAACAAAATGTACATA+GGG + chr4_4:52978247-52978266 None:intergenic 20.0%
!! ATATACAACAAAATGTACAT+AGG + chr4_4:52978248-52978267 None:intergenic 20.0%
!!! ATTTTACTTCAATAAACACA+AGG + chr4_4:52978426-52978445 None:intergenic 20.0%
!! TAGTATAATACATAGAAATG+TGG - chr4_4:52978466-52978485 Msa0687940:CDS 20.0%
!!! TTATTTTGTTGTATGTTTAG+TGG - chr4_4:52978563-52978582 Msa0687940:intron 20.0%
!!! ACATGACAAATTGTATTTTA+AGG - chr4_4:52978951-52978970 Msa0687940:intron 20.0%
!!! CATGACAAATTGTATTTTAA+GGG - chr4_4:52978952-52978971 Msa0687940:intron 20.0%
!! CAAACCATGAAATTATTATA+TGG - chr4_4:52979145-52979164 Msa0687940:intron 20.0%
!! GTTTCCATATAATAATTTCA+TGG + chr4_4:52979152-52979171 None:intergenic 20.0%
!! AAGAAAAATAAGACAGAAAA+AGG - chr4_4:52979639-52979658 Msa0687940:intron 20.0%
!! AAAGAGTTCTTTATAGTAAT+CGG - chr4_4:52979989-52980008 Msa0687940:intron 20.0%
!! TATTAAATATACTGAAGTGT+TGG + chr4_4:52980635-52980654 None:intergenic 20.0%
!! AAAATTAGATTTCACTATGA+AGG - chr4_4:52981021-52981040 Msa0687940:intron 20.0%
!!! TATAATTATCTAAGTTGAAG+CGG + chr4_4:52981325-52981344 None:intergenic 20.0%
!! AATATAAATCATGACATGAA+TGG + chr4_4:52981562-52981581 None:intergenic 20.0%
!!! TTTATTTTTCAGATTTCCTT+TGG - chr4_4:52981673-52981692 Msa0687940:intron 20.0%
!! TCTTACAACATCAAATATAT+TGG - chr4_4:52981902-52981921 Msa0687940:intron 20.0%
!! CAATATTTGTTCATTTGAAT+TGG - chr4_4:52981925-52981944 Msa0687940:intron 20.0%
!! TACTATAAACACATTTATAG+AGG + chr4_4:52982207-52982226 None:intergenic 20.0%
!! ATATAACATTACAGATACAT+TGG + chr4_4:52982253-52982272 None:intergenic 20.0%
!!! AGAAAAATTGTTTCTCATAT+AGG + chr4_4:52982369-52982388 None:intergenic 20.0%
! TTTGAATTATGTTATTCCAG+TGG + chr4_4:52975534-52975553 None:intergenic 25.0%
!! TGTATTTTGTGTCTATATGT+CGG - chr4_4:52975828-52975847 Msa0687940:CDS 25.0%
! GTGCTTCATATTTATTTGTT+TGG - chr4_4:52975864-52975883 Msa0687940:intron 25.0%
!!! GAAATGCATTGATTTTCATT+AGG - chr4_4:52976050-52976069 Msa0687940:CDS 25.0%
! AAGAATAAACTTACTAGCTA+TGG - chr4_4:52976285-52976304 Msa0687940:CDS 25.0%
!! TTATGTTGATCATGTTTTCT+GGG - chr4_4:52976369-52976388 Msa0687940:intron 25.0%
!! TGACTAGTTAAATATTTCCA+CGG + chr4_4:52976533-52976552 None:intergenic 25.0%
!! TGTTCTTCTAAAAACTAATG+CGG - chr4_4:52976612-52976631 Msa0687940:intron 25.0%
!! TTGAAGATATTTAGTTCCAA+TGG - chr4_4:52976699-52976718 Msa0687940:intron 25.0%
! AAGGAAAAAAAACGATTGAA+AGG + chr4_4:52976736-52976755 None:intergenic 25.0%
!! ATAAGATATTAAGTTGCAAC+AGG + chr4_4:52976811-52976830 None:intergenic 25.0%
! TTAATCAACATACAGTTGTT+GGG + chr4_4:52977054-52977073 None:intergenic 25.0%
! TTTAATCAACATACAGTTGT+TGG + chr4_4:52977055-52977074 None:intergenic 25.0%
! AAAGGAAGAAATCTAAAAGA+AGG + chr4_4:52977098-52977117 None:intergenic 25.0%
! CTACTATTTGGATATGATAT+TGG - chr4_4:52977376-52977395 Msa0687940:intron 25.0%
! ACCAAATGAAAATATTGAAG+CGG + chr4_4:52977460-52977479 None:intergenic 25.0%
!!! AAAGTTCTGGAAATTATTAC+AGG + chr4_4:52977492-52977511 None:intergenic 25.0%
!!! TTTTCCATGCTTTATTTGTA+AGG - chr4_4:52977589-52977608 Msa0687940:CDS 25.0%
!! ATCTCTTTGTTGAGTTTTTA+CGG - chr4_4:52977738-52977757 Msa0687940:intron 25.0%
! AAGCTCATATACTATTTGTT+GGG + chr4_4:52978036-52978055 None:intergenic 25.0%
! AAAGGTTAACTCTTTAATTC+TGG + chr4_4:52978170-52978189 None:intergenic 25.0%
! TAAGAAATCAGCAATATTGA+AGG + chr4_4:52978870-52978889 None:intergenic 25.0%
!!! TTCAATATTGCTGATTTCTT+AGG - chr4_4:52978869-52978888 Msa0687940:CDS 25.0%
! ATCACCAATAAAGGAAAATT+AGG + chr4_4:52979044-52979063 None:intergenic 25.0%
!!! AATTTTCCTTTATTGGTGAT+TGG - chr4_4:52979044-52979063 Msa0687940:intron 25.0%
!!! ATTTTCCTTTATTGGTGATT+GGG - chr4_4:52979045-52979064 Msa0687940:intron 25.0%
! AAACGTTTCTTCTTAATTGT+TGG + chr4_4:52979259-52979278 None:intergenic 25.0%
! ATGTGTAAGTACAAATACAA+AGG + chr4_4:52979338-52979357 None:intergenic 25.0%
!!! TCTCAACTGATTTTTATCAA+CGG - chr4_4:52979358-52979377 Msa0687940:intron 25.0%
! AAATATATATTGTACGTACC+CGG + chr4_4:52979454-52979473 None:intergenic 25.0%
!!! TGTTTTTGAAGAAGCAAAAT+AGG - chr4_4:52979475-52979494 Msa0687940:intron 25.0%
!!! GTTTTTGAAGAAGCAAAATA+GGG - chr4_4:52979476-52979495 Msa0687940:intron 25.0%
! AAAAAGGATATAAACGTAAC+AGG - chr4_4:52979655-52979674 Msa0687940:intron 25.0%
! TAAATCTTAGAGTTGACATA+AGG + chr4_4:52979716-52979735 None:intergenic 25.0%
! AAGAAAATGATGTTACCTTA+GGG - chr4_4:52980499-52980518 Msa0687940:intron 25.0%
! AAAATTAACATAACACCTGT+AGG + chr4_4:52980722-52980741 None:intergenic 25.0%
! TTATCAATTACATATCACCA+TGG - chr4_4:52980770-52980789 Msa0687940:intron 25.0%
!! AATAGTGTTATTACATTCCA+TGG + chr4_4:52980790-52980809 None:intergenic 25.0%
! ACTAAAAATGTTTCTTTCTC+AGG + chr4_4:52981290-52981309 None:intergenic 25.0%
! GTTCAAATTATAAGAACATG+TGG - chr4_4:52981389-52981408 Msa0687940:CDS 25.0%
! GTAATCTCATTATTCTTACT+GGG - chr4_4:52981427-52981446 Msa0687940:CDS 25.0%
! GAAAATGAAATTCCTTATCT+AGG + chr4_4:52981604-52981623 None:intergenic 25.0%
! GTAGGAATTATGATAAAAAG+TGG + chr4_4:52981628-52981647 None:intergenic 25.0%
! AACAATTTCAATGAAGTCAA+CGG + chr4_4:52982001-52982020 None:intergenic 25.0%
!!! TTTTTGTTGTCTGTTTACTA+CGG - chr4_4:52982326-52982345 Msa0687940:intron 25.0%
TTCGAACTTCAAAGCAAAAA+TGG - chr4_4:52975143-52975162 Msa0687940:three_prime_UTR 30.0%
TTGTAGAACAAAGAATGAAG+AGG + chr4_4:52975215-52975234 None:intergenic 30.0%
AGAAAAAAAACTGTATTGGG+AGG - chr4_4:52975322-52975341 Msa0687940:three_prime_UTR 30.0%
GAAAAAAAACTGTATTGGGA+GGG - chr4_4:52975323-52975342 Msa0687940:three_prime_UTR 30.0%
! GTTGGAATTTTGCTTGAAAA+CGG - chr4_4:52975381-52975400 Msa0687940:CDS 30.0%
! ATTTTGCTTGAAAACGGTAA+TGG - chr4_4:52975387-52975406 Msa0687940:CDS 30.0%
! TTTTGCTTGAAAACGGTAAT+GGG - chr4_4:52975388-52975407 Msa0687940:CDS 30.0%
! AGATCTTTAATCAGAAGTGT+TGG + chr4_4:52975612-52975631 None:intergenic 30.0%
!!! TGCATTGATTTTCATTAGGA+AGG - chr4_4:52976054-52976073 Msa0687940:CDS 30.0%
TCAAAAGGTAATAACACTCA+CGG + chr4_4:52976171-52976190 None:intergenic 30.0%
AACGAGTAAAAAAGTAACAC+AGG + chr4_4:52976196-52976215 None:intergenic 30.0%
! GTTATGTTGATCATGTTTTC+TGG - chr4_4:52976368-52976387 Msa0687940:intron 30.0%
TAGACTAAGATAACCATGTT+TGG - chr4_4:52976555-52976574 Msa0687940:intron 30.0%
ATCAAGTAACAAACCAAACA+TGG + chr4_4:52976571-52976590 None:intergenic 30.0%
! TTTTCCTTCAAGAAATCACT+TGG - chr4_4:52976748-52976767 Msa0687940:intron 30.0%
! ATGATAAAAGTAGCTTGTGT+CGG - chr4_4:52976835-52976854 Msa0687940:CDS 30.0%
TATCTTACCACAAAACCTTA+AGG + chr4_4:52976963-52976982 None:intergenic 30.0%
!! TAAGGTTTTGTGGTAAGATA+TGG - chr4_4:52976963-52976982 Msa0687940:CDS 30.0%
ACAACCAAACTGAAGAAAAT+TGG - chr4_4:52977149-52977168 Msa0687940:CDS 30.0%
! TATTTCATCGTCTTTTCACT+AGG + chr4_4:52977277-52977296 None:intergenic 30.0%
GTATCAAAAGTAGAGTAGAA+TGG + chr4_4:52977438-52977457 None:intergenic 30.0%
! ACCGCTTCAATATTTTCATT+TGG - chr4_4:52977456-52977475 Msa0687940:intron 30.0%
! GCTTCAATATTTTCATTTGG+TGG - chr4_4:52977459-52977478 Msa0687940:intron 30.0%
ATACTATGAGATCATACTTC+TGG + chr4_4:52977563-52977582 None:intergenic 30.0%
AACACCTTACAAATAAAGCA+TGG + chr4_4:52977596-52977615 None:intergenic 30.0%
TAAGACTGAAATTACGTTAC+CGG + chr4_4:52977707-52977726 None:intergenic 30.0%
! AGTTTTTACGGTGTCTATAT+TGG - chr4_4:52977750-52977769 Msa0687940:intron 30.0%
AATGAGAAAATACAGGATAC+TGG + chr4_4:52977940-52977959 None:intergenic 30.0%
!! CATTTTAGTCAACACAGAAA+TGG - chr4_4:52977992-52978011 Msa0687940:intron 30.0%
CAAGCTCATATACTATTTGT+TGG + chr4_4:52978037-52978056 None:intergenic 30.0%
CAACAAATAGTATATGAGCT+TGG - chr4_4:52978035-52978054 Msa0687940:intron 30.0%
! TAAATAAGTTCTGGCGTAAA+GGG + chr4_4:52978207-52978226 None:intergenic 30.0%
! ATAAATAAGTTCTGGCGTAA+AGG + chr4_4:52978208-52978227 None:intergenic 30.0%
! AAATGTGGATTTTTATGCTG+AGG - chr4_4:52978481-52978500 Msa0687940:CDS 30.0%
!! TTCTTGGTTTGTTCTTTACT+TGG - chr4_4:52978697-52978716 Msa0687940:intron 30.0%
TCATTATATGGTGCCTTAAT+AGG - chr4_4:52978833-52978852 Msa0687940:intron 30.0%
!! ACTCTTAGTCTTATTGGAAT+AGG - chr4_4:52979119-52979138 Msa0687940:intron 30.0%
ACGTAGATATAAAGTTTCAG+TGG + chr4_4:52979404-52979423 None:intergenic 30.0%
AACTTTATATCTACGTTGCA+TGG - chr4_4:52979408-52979427 Msa0687940:intron 30.0%
!!! TCCTACGTCTATTTTGATTT+GGG + chr4_4:52979612-52979631 None:intergenic 30.0%
!!! TTCCTACGTCTATTTTGATT+TGG + chr4_4:52979613-52979632 None:intergenic 30.0%
ATTCTCGATTGCAACATTAA+CGG + chr4_4:52979768-52979787 None:intergenic 30.0%
TCTGCATGTATATGTATTGT+TGG - chr4_4:52979821-52979840 Msa0687940:intron 30.0%
AGAACAGACATGAAAATTCA+AGG + chr4_4:52980049-52980068 None:intergenic 30.0%
ATTGAAGAAGCTTTACATGA+AGG + chr4_4:52980116-52980135 None:intergenic 30.0%
! TAATAATGGGATTTGGAATG+TGG - chr4_4:52980301-52980320 Msa0687940:intron 30.0%
TTTACGTGCTATACAGAAAA+AGG - chr4_4:52980353-52980372 Msa0687940:intron 30.0%
TTACGTGCTATACAGAAAAA+GGG - chr4_4:52980354-52980373 Msa0687940:intron 30.0%
!! ATGGCAGAGTTTTCTTATTT+AGG - chr4_4:52980474-52980493 Msa0687940:intron 30.0%
GAAGAAAATGATGTTACCTT+AGG - chr4_4:52980498-52980517 Msa0687940:intron 30.0%
AGAAAATGATGTTACCTTAG+GGG - chr4_4:52980500-52980519 Msa0687940:intron 30.0%
AAATGTTTCGTGGAAAATGT+CGG - chr4_4:52980523-52980542 Msa0687940:intron 30.0%
TGCACTCTACCAAATTTAAT+TGG + chr4_4:52980818-52980837 None:intergenic 30.0%
AATTAAATTTGGTAGAGTGC+AGG - chr4_4:52980817-52980836 Msa0687940:intron 30.0%
! TATTCTCCTTGGTGTATTTA+AGG - chr4_4:52980873-52980892 Msa0687940:intron 30.0%
AATCTACCTTAAATACACCA+AGG + chr4_4:52980882-52980901 None:intergenic 30.0%
TTAACATCACATGTATGTCA+AGG - chr4_4:52980983-52981002 Msa0687940:intron 30.0%
GGCAAGCTAAATTTATAACT+TGG + chr4_4:52981073-52981092 None:intergenic 30.0%
AACTTACTGCGTTATTAACA+AGG + chr4_4:52981094-52981113 None:intergenic 30.0%
ATATGATCACATCATGTAGA+TGG + chr4_4:52981127-52981146 None:intergenic 30.0%
TCAACTACAACAAAAACAGA+AGG + chr4_4:52981161-52981180 None:intergenic 30.0%
TTGTTGTAGTTGATTATGAC+TGG - chr4_4:52981168-52981187 Msa0687940:intron 30.0%
GAAATAGAAAGGAGATAGAA+AGG + chr4_4:52981268-52981287 None:intergenic 30.0%
TTCTTTCTCAGGAAATAGAA+AGG + chr4_4:52981279-52981298 None:intergenic 30.0%
GGTAATCTCATTATTCTTAC+TGG - chr4_4:52981426-52981445 Msa0687940:CDS 30.0%
!!! ATGTTGTTTTCACCTAGATA+AGG - chr4_4:52981589-52981608 Msa0687940:intron 30.0%
AAGGTAACGAAATTGTGAAA+AGG - chr4_4:52981820-52981839 Msa0687940:intron 30.0%
AGTAAATCCTGTAAAGTAGA+GGG + chr4_4:52982045-52982064 None:intergenic 30.0%
TCTACTTTACAGGATTTACT+GGG - chr4_4:52982045-52982064 Msa0687940:intron 30.0%
ACACATTTATAGAGGTAACA+AGG + chr4_4:52982199-52982218 None:intergenic 30.0%
!! TTTTGTTGTCTGTTTACTAC+GGG - chr4_4:52982327-52982346 Msa0687940:intron 30.0%
TATGAAAGCTTAAAAGGGGT+TGG - chr4_4:52975363-52975382 Msa0687940:CDS 35.0%
TTACTAAACCCCAAATGAAG+CGG + chr4_4:52975472-52975491 None:intergenic 35.0%
! TCATTTGGGGTTTAGTAACT+TGG - chr4_4:52975474-52975493 Msa0687940:intron 35.0%
TGGACACTCTCAACATAAAA+TGG + chr4_4:52975514-52975533 None:intergenic 35.0%
! GTTTTGTGCTTTGCTCTTTT+GGG - chr4_4:52975886-52975905 Msa0687940:intron 35.0%
! TTTTGTGCTTTGCTCTTTTG+GGG - chr4_4:52975887-52975906 Msa0687940:intron 35.0%
AAAGTAACACAGGAGTCAAA+AGG + chr4_4:52976186-52976205 None:intergenic 35.0%
AAACTTACTAGCTATGGTAG+AGG - chr4_4:52976291-52976310 Msa0687940:CDS 35.0%
AGGACTATAACTTCTGTTAG+TGG - chr4_4:52976311-52976330 Msa0687940:CDS 35.0%
! AGGACTTTAATTTCTCAGTG+TGG - chr4_4:52976344-52976363 Msa0687940:intron 35.0%
! TCTTCTAAAAACTAATGCGG+CGG - chr4_4:52976615-52976634 Msa0687940:intron 35.0%
AAAGGAACATTGAACTCCAT+TGG + chr4_4:52976718-52976737 None:intergenic 35.0%
! TCCATTTTACCAAGCAATGT+GGG + chr4_4:52976899-52976918 None:intergenic 35.0%
! TTGAGGACTTGATAACTAAG+AGG - chr4_4:52976921-52976940 Msa0687940:intron 35.0%
! CCACAAAACCTTAAGGTATT+CGG + chr4_4:52976956-52976975 None:intergenic 35.0%
CAATGTCAAGCAGAAAGAAA+AGG + chr4_4:52977116-52977135 None:intergenic 35.0%
! GATGCCAATTTTCTTCAGTT+TGG + chr4_4:52977156-52977175 None:intergenic 35.0%
TGCTATCAGAAAATCAAGGA+TGG + chr4_4:52977195-52977214 None:intergenic 35.0%
!! GACTTGCTATCAGAAAATCA+AGG + chr4_4:52977199-52977218 None:intergenic 35.0%
TAGTGCAACAATTTCCATTC+AGG - chr4_4:52977408-52977427 Msa0687940:intron 35.0%
AGTAGAATGGTTTACCTGAA+TGG + chr4_4:52977425-52977444 None:intergenic 35.0%
!! AATCGGAATCTCTAAAGTTC+TGG + chr4_4:52977505-52977524 None:intergenic 35.0%
CAACAGTACAGCAGAAAAAT+CGG + chr4_4:52977522-52977541 None:intergenic 35.0%
AAGACTGAAATTACGTTACC+GGG + chr4_4:52977706-52977725 None:intergenic 35.0%
ATCTACCCACAACTTCTAAT+GGG + chr4_4:52977791-52977810 None:intergenic 35.0%
TATCTACCCACAACTTCTAA+TGG + chr4_4:52977792-52977811 None:intergenic 35.0%
!! TGTTGTACTGCTTTTACACT+TGG + chr4_4:52977816-52977835 None:intergenic 35.0%
AAGTGTAAAAGCAGTACAAC+AGG - chr4_4:52977815-52977834 Msa0687940:intron 35.0%
! TGGAACATATGATGGAGAAA+AGG - chr4_4:52977844-52977863 Msa0687940:intron 35.0%
! GGAACATATGATGGAGAAAA+GGG - chr4_4:52977845-52977864 Msa0687940:intron 35.0%
GATGGCAAATGAGAAAATAC+AGG + chr4_4:52977947-52977966 None:intergenic 35.0%
TCTCATTTGCCATCTCTTAT+TGG - chr4_4:52977953-52977972 Msa0687940:intron 35.0%
AGAATGACACCAATAAGAGA+TGG + chr4_4:52977965-52977984 None:intergenic 35.0%
ACAGAAATGGACATTTGTTC+TGG - chr4_4:52978005-52978024 Msa0687940:intron 35.0%
ACTTATTGCTATGGTTCCTT+AGG + chr4_4:52978061-52978080 None:intergenic 35.0%
AGTTCCATCACTTATTGCTA+TGG + chr4_4:52978070-52978089 None:intergenic 35.0%
! TAGCAATAAGTGATGGAACT+TGG - chr4_4:52978070-52978089 Msa0687940:intron 35.0%
! TAAGTGATGGAACTTGGAAA+TGG - chr4_4:52978076-52978095 Msa0687940:intron 35.0%
! AAGAGTTAACCTTTTCTCGA+AGG - chr4_4:52978176-52978195 Msa0687940:intron 35.0%
TCGTGGATGAAATAATGAGA+GGG + chr4_4:52978350-52978369 None:intergenic 35.0%
! TTTTCATTGCGTGATAGAAC+TGG - chr4_4:52978390-52978409 Msa0687940:intron 35.0%
TCAGTCAAAGTGACACAAAA+AGG + chr4_4:52978507-52978526 None:intergenic 35.0%
CAAGTTATTCCACTTAGTGA+TGG + chr4_4:52978627-52978646 None:intergenic 35.0%
CATCACTAAGTGGAATAACT+TGG - chr4_4:52978625-52978644 Msa0687940:intron 35.0%
TTAGATATAGTATCCTTCCC+AGG - chr4_4:52978920-52978939 Msa0687940:intron 35.0%
! CGCTCCTAATTTTCCTTTAT+TGG - chr4_4:52979037-52979056 Msa0687940:intron 35.0%
AATCTCCCAATCACCAATAA+AGG + chr4_4:52979053-52979072 None:intergenic 35.0%
! TTTATTGGTGATTGGGAGAT+TGG - chr4_4:52979052-52979071 Msa0687940:intron 35.0%
TTGGTATTTGGCATAGGAAT+TGG - chr4_4:52979071-52979090 Msa0687940:intron 35.0%
!!! TGGTATGCTCTTTTTTATGC+TGG - chr4_4:52979096-52979115 Msa0687940:intron 35.0%
TATTATATGGAAACTGCTGC+TGG - chr4_4:52979158-52979177 Msa0687940:intron 35.0%
ATTATATGGAAACTGCTGCT+GGG - chr4_4:52979159-52979178 Msa0687940:intron 35.0%
ATATCTACGTTGCATGGATA+CGG - chr4_4:52979414-52979433 Msa0687940:intron 35.0%
!!! CCTACGTCTATTTTGATTTG+GGG + chr4_4:52979611-52979630 None:intergenic 35.0%
! GTGTTCATTCCATCTCTTTT+AGG - chr4_4:52979895-52979914 Msa0687940:intron 35.0%
! TGTAAGTTCTCGAACTTTTC+TGG - chr4_4:52980018-52980037 Msa0687940:intron 35.0%
!! CTTCCAGGTGTTACTAAAAA+TGG - chr4_4:52980173-52980192 Msa0687940:intron 35.0%
TAGTCCTGTTGCAGTAATAA+TGG - chr4_4:52980287-52980306 Msa0687940:intron 35.0%
AGTCCTGTTGCAGTAATAAT+GGG - chr4_4:52980288-52980307 Msa0687940:intron 35.0%
AATCCCATTATTACTGCAAC+AGG + chr4_4:52980294-52980313 None:intergenic 35.0%
! GTTGCAGTAATAATGGGATT+TGG - chr4_4:52980294-52980313 Msa0687940:intron 35.0%
TACGTGCTATACAGAAAAAG+GGG - chr4_4:52980355-52980374 Msa0687940:intron 35.0%
GAAGCAGAATCATGAAATGT+AGG + chr4_4:52980435-52980454 None:intergenic 35.0%
TCAGCAAGTAGATGAGATTA+TGG - chr4_4:52980455-52980474 Msa0687940:intron 35.0%
TCACTATGAAGGAATTCTTC+AGG - chr4_4:52981032-52981051 Msa0687940:intron 35.0%
CACTATGAAGGAATTCTTCA+GGG - chr4_4:52981033-52981052 Msa0687940:intron 35.0%
ACTATGAAGGAATTCTTCAG+GGG - chr4_4:52981034-52981053 Msa0687940:intron 35.0%
ATTTGAACTTCATCGACAAC+TGG + chr4_4:52981377-52981396 None:intergenic 35.0%
AGAACATGTGGTTATTTGTG+TGG - chr4_4:52981401-52981420 Msa0687940:CDS 35.0%
GGGTTCGTATTACATATTCT+TGG - chr4_4:52981447-52981466 Msa0687940:intron 35.0%
ATCACTAAATGGTGTAAGCA+TGG + chr4_4:52981653-52981672 None:intergenic 35.0%
ACAATTTCGTTACCTTCAGT+GGG + chr4_4:52981816-52981835 None:intergenic 35.0%
!!! GTTTTTTCCCTCTACTTTAC+AGG - chr4_4:52982035-52982054 Msa0687940:intron 35.0%
CAGTAAATCCTGTAAAGTAG+AGG + chr4_4:52982046-52982065 None:intergenic 35.0%
CTCTACTTTACAGGATTTAC+TGG - chr4_4:52982044-52982063 Msa0687940:intron 35.0%
! CATATTTTCTGCAATAGCTG+TGG - chr4_4:52982086-52982105 Msa0687940:intron 35.0%
TTCATTGTACCAGAAACCAA+GGG - chr4_4:52982129-52982148 Msa0687940:intron 35.0%
AGCACTTGCACTCTTTGAAT+TGG - chr4_4:52975281-52975300 Msa0687940:three_prime_UTR 40.0%
CTTGCACTCTTTGAATTGGT+TGG - chr4_4:52975285-52975304 Msa0687940:three_prime_UTR 40.0%
AAAACTGTATTGGGAGGGAA+TGG - chr4_4:52975328-52975347 Msa0687940:three_prime_UTR 40.0%
ACTAGTTGAACCGCTTCATT+TGG - chr4_4:52975459-52975478 Msa0687940:CDS 40.0%
CTAGTTGAACCGCTTCATTT+GGG - chr4_4:52975460-52975479 Msa0687940:CDS 40.0%
TAGTTGAACCGCTTCATTTG+GGG - chr4_4:52975461-52975480 Msa0687940:intron 40.0%
!! TTTATGTTGAGAGTGTCCAC+TGG - chr4_4:52975515-52975534 Msa0687940:intron 40.0%
GTAACTACATGTCTCAGTGT+CGG + chr4_4:52975644-52975663 None:intergenic 40.0%
ACTAAGTGAGATCAGCTACA+AGG + chr4_4:52975793-52975812 None:intergenic 40.0%
!! GGTTTTGTGCTTTGCTCTTT+TGG - chr4_4:52975885-52975904 Msa0687940:intron 40.0%
CCATGAATTCCATTAAGCAG+AGG + chr4_4:52976114-52976133 None:intergenic 40.0%
CCTCTGCTTAATGGAATTCA+TGG - chr4_4:52976111-52976130 Msa0687940:intron 40.0%
GAAATTAAAGTCCTCAGCAC+AGG + chr4_4:52976338-52976357 None:intergenic 40.0%
! TGTTGATCATGTTTTCTGGG+TGG - chr4_4:52976372-52976391 Msa0687940:intron 40.0%
TGATGTGCTTTGCTTTGTCA+TGG - chr4_4:52976429-52976448 Msa0687940:intron 40.0%
GATGTGCTTTGCTTTGTCAT+GGG - chr4_4:52976430-52976449 Msa0687940:intron 40.0%
ATGTGCTTTGCTTTGTCATG+GGG - chr4_4:52976431-52976450 Msa0687940:intron 40.0%
CATCACCTATTCATGTCTCT+TGG - chr4_4:52976480-52976499 Msa0687940:intron 40.0%
AGAGACCAAGAGACATGAAT+AGG + chr4_4:52976488-52976507 None:intergenic 40.0%
GGAATGAAATGCTCACTGAT+AGG + chr4_4:52976673-52976692 None:intergenic 40.0%
TAAAAGCTGAAGGTGGCATA+TGG + chr4_4:52976783-52976802 None:intergenic 40.0%
ACAGGATAGCTAAAAGCTGA+AGG + chr4_4:52976793-52976812 None:intergenic 40.0%
GTTAAAAGTCCCACATTGCT+TGG - chr4_4:52976887-52976906 Msa0687940:intron 40.0%
TCCCACATTGCTTGGTAAAA+TGG - chr4_4:52976895-52976914 Msa0687940:intron 40.0%
! CTCCATTTTACCAAGCAATG+TGG + chr4_4:52976900-52976919 None:intergenic 40.0%
CACATTGCTTGGTAAAATGG+AGG - chr4_4:52976898-52976917 Msa0687940:intron 40.0%
! CCTTAAGGTATTCGGTTCAT+GGG + chr4_4:52976948-52976967 None:intergenic 40.0%
! ACCTTAAGGTATTCGGTTCA+TGG + chr4_4:52976949-52976968 None:intergenic 40.0%
! CCGAATACCTTAAGGTTTTG+TGG - chr4_4:52976953-52976972 Msa0687940:CDS 40.0%
ACATACAGTTGTTGGGTCAT+GGG + chr4_4:52977047-52977066 None:intergenic 40.0%
AACATACAGTTGTTGGGTCA+TGG + chr4_4:52977048-52977067 None:intergenic 40.0%
! AGATTTCTCTTCCCAGCTTT+TGG - chr4_4:52977349-52977368 Msa0687940:intron 40.0%
ATAGTAGACCACCAAAAGCT+GGG + chr4_4:52977363-52977382 None:intergenic 40.0%
AATAGTAGACCACCAAAAGC+TGG + chr4_4:52977364-52977383 None:intergenic 40.0%
!! GCTTTTGGTGGTCTACTATT+TGG - chr4_4:52977364-52977383 Msa0687940:intron 40.0%
GGAAATTGTTGCACTAGATG+TGG + chr4_4:52977404-52977423 None:intergenic 40.0%
! TTTTCCCCCATTAGAAGTTG+TGG - chr4_4:52977782-52977801 Msa0687940:intron 40.0%
TTTCCCCCATTAGAAGTTGT+GGG - chr4_4:52977783-52977802 Msa0687940:intron 40.0%
TCTACCCACAACTTCTAATG+GGG + chr4_4:52977790-52977809 None:intergenic 40.0%
GGTCATCTTGGAACATATGA+TGG - chr4_4:52977836-52977855 Msa0687940:intron 40.0%
TAGTATATGAGCTTGGCCTA+AGG - chr4_4:52978042-52978061 Msa0687940:intron 40.0%
GGAACCATAGCAATAAGTGA+TGG - chr4_4:52978063-52978082 Msa0687940:intron 40.0%
AGGGAAAAACCTTCGAGAAA+AGG + chr4_4:52978188-52978207 None:intergenic 40.0%
!! GAGGGATTAGTTAGGAGAAA+AGG + chr4_4:52978271-52978290 None:intergenic 40.0%
AGACAACAAGAAGTTAGGAG+GGG + chr4_4:52978298-52978317 None:intergenic 40.0%
GAGACAACAAGAAGTTAGGA+GGG + chr4_4:52978299-52978318 None:intergenic 40.0%
CTACGAGACAACAAGAAGTT+AGG + chr4_4:52978303-52978322 None:intergenic 40.0%
ATGAGAGGGAGAAGAGAATA+TGG + chr4_4:52978336-52978355 None:intergenic 40.0%
GTCGTGGATGAAATAATGAG+AGG + chr4_4:52978351-52978370 None:intergenic 40.0%
CTACACTGTTAGTAAAGTCG+TGG + chr4_4:52978367-52978386 None:intergenic 40.0%
! GTGATGGTGACTGCAAATAA+GGG + chr4_4:52978611-52978630 None:intergenic 40.0%
! AGTGATGGTGACTGCAAATA+AGG + chr4_4:52978612-52978631 None:intergenic 40.0%
GACTTAGACGCTGTTGAAAT+TGG - chr4_4:52978651-52978670 Msa0687940:CDS 40.0%
! TGATGTCTTTTGCAGACTAG+CGG - chr4_4:52978809-52978828 Msa0687940:intron 40.0%
! CAGACTAGCGGATCATTATA+TGG - chr4_4:52978821-52978840 Msa0687940:intron 40.0%
! GCTGCATTGATGTATCTTGT+TGG - chr4_4:52978996-52979015 Msa0687940:intron 40.0%
GTGATTGGGAGATTGGTATT+TGG - chr4_4:52979059-52979078 Msa0687940:intron 40.0%
ATTTGGCATAGGAATTGGAC+TGG - chr4_4:52979076-52979095 Msa0687940:intron 40.0%
!! TGCTGGACTCTTAGTCTTAT+TGG - chr4_4:52979113-52979132 Msa0687940:intron 40.0%
TATCTACGTTGCATGGATAC+GGG - chr4_4:52979415-52979434 Msa0687940:intron 40.0%
CCCCAAATCAAAATAGACGT+AGG - chr4_4:52979608-52979627 Msa0687940:intron 40.0%
AACGTAACAGGAGTCTGATA+CGG - chr4_4:52979667-52979686 Msa0687940:intron 40.0%
! TACGGGTACAACATGAGTTT+TGG - chr4_4:52979685-52979704 Msa0687940:intron 40.0%
CATGCATTGCCTAAAAGAGA+TGG + chr4_4:52979907-52979926 None:intergenic 40.0%
GCTTTACATGAAGGAGTAGA+AGG + chr4_4:52980107-52980126 None:intergenic 40.0%
!!! TGGCCATTTTTAGTAACACC+TGG + chr4_4:52980179-52980198 None:intergenic 40.0%
! TAATGGGATTTGGAATGTGG+TGG - chr4_4:52980304-52980323 Msa0687940:intron 40.0%
ACGTGCTATACAGAAAAAGG+GGG - chr4_4:52980356-52980375 Msa0687940:intron 40.0%
CAATCCTGCACTTATCACAA+GGG + chr4_4:52980553-52980572 None:intergenic 40.0%
!! AGGATTGGTCTTGTTTCAAC+AGG - chr4_4:52980566-52980585 Msa0687940:intron 40.0%
ATGCAAACTGTGACAGATCA+CGG - chr4_4:52980662-52980681 Msa0687940:intron 40.0%
TAACACCTGTAGGATTGATG+CGG + chr4_4:52980712-52980731 None:intergenic 40.0%
GTAGTTGATTATGACTGGAG+TGG - chr4_4:52981173-52981192 Msa0687940:intron 40.0%
! GCTCTATGTTGGTTGTTATC+AGG - chr4_4:52981504-52981523 Msa0687940:intron 40.0%
AATGGTGTAAGCATGGATGT+AGG + chr4_4:52981646-52981665 None:intergenic 40.0%
! ATTTTTCCCTTACGCTTGAG+AGG - chr4_4:52981724-52981743 Msa0687940:intron 40.0%
! AGCAGTTCTCGTCAATTTTG+CGG - chr4_4:52981762-52981781 Msa0687940:intron 40.0%
GGAAAAGGCAAATGTAACCA+GGG + chr4_4:52981794-52981813 None:intergenic 40.0%
CAATTTCGTTACCTTCAGTG+GGG + chr4_4:52981815-52981834 None:intergenic 40.0%
CACAATTTCGTTACCTTCAG+TGG + chr4_4:52981817-52981836 None:intergenic 40.0%
CTTCATTGTACCAGAAACCA+AGG - chr4_4:52982128-52982147 Msa0687940:intron 40.0%
TCATTGTACCAGAAACCAAG+GGG - chr4_4:52982130-52982149 Msa0687940:intron 40.0%
GTAACAAGGTGACAGATTAC+AGG + chr4_4:52982185-52982204 None:intergenic 40.0%
TTGTCTGTTTACTACGGGAT+TGG - chr4_4:52982332-52982351 Msa0687940:CDS 40.0%
TTTACTACGGGATTGGATCA+TGG - chr4_4:52982339-52982358 Msa0687940:CDS 40.0%
TGTGAGAAAGAGGAAAGTGG+GGG + chr4_4:52975186-52975205 None:intergenic 45.0%
CTGTGAGAAAGAGGAAAGTG+GGG + chr4_4:52975187-52975206 None:intergenic 45.0%
CCTGTGAGAAAGAGGAAAGT+GGG + chr4_4:52975188-52975207 None:intergenic 45.0%
ACCTGTGAGAAAGAGGAAAG+TGG + chr4_4:52975189-52975208 None:intergenic 45.0%
CACCGAGGTTACAAGTGAAA+GGG - chr4_4:52976086-52976105 Msa0687940:CDS 45.0%
CTCCCTTTCACTTGTAACCT+CGG + chr4_4:52976091-52976110 None:intergenic 45.0%
! CAGAGAGGGAATAGTCTTGA+GGG + chr4_4:52976137-52976156 None:intergenic 45.0%
GAGAAACGTGTTAGCCATGA+AGG - chr4_4:52976394-52976413 Msa0687940:intron 45.0%
GTGTTAGCCATGAAGGATAG+AGG - chr4_4:52976401-52976420 Msa0687940:intron 45.0%
TAGCCATGAAGGATAGAGGA+TGG - chr4_4:52976405-52976424 Msa0687940:intron 45.0%
AGCCATGAAGGATAGAGGAT+GGG - chr4_4:52976406-52976425 Msa0687940:intron 45.0%
CATGTCTCTTGGTCTCTGTT+TGG - chr4_4:52976491-52976510 Msa0687940:intron 45.0%
! CTTGGTCTCTGTTTGGTTCA+TGG - chr4_4:52976498-52976517 Msa0687940:intron 45.0%
TCTAAAAACTAATGCGGCGG+TGG - chr4_4:52976618-52976637 Msa0687940:intron 45.0%
GGCACCAAGTGATTTCTTGA+AGG + chr4_4:52976755-52976774 None:intergenic 45.0%
GGATAGCTAAAAGCTGAAGG+TGG + chr4_4:52976790-52976809 None:intergenic 45.0%
GCTTGGTAAAATGGAGGTTG+AGG - chr4_4:52976904-52976923 Msa0687940:intron 45.0%
CCCATGAACCGAATACCTTA+AGG - chr4_4:52976945-52976964 Msa0687940:intron 45.0%
TGGTGTTCAACTCACTTGTG+TGG - chr4_4:52976983-52977002 Msa0687940:CDS 45.0%
CCTAATGTGGATGATCCCTT+GGG - chr4_4:52977016-52977035 Msa0687940:CDS 45.0%
CATACAGTTGTTGGGTCATG+GGG + chr4_4:52977046-52977065 None:intergenic 45.0%
! TTTCTCTTCCCAGCTTTTGG+TGG - chr4_4:52977352-52977371 Msa0687940:intron 45.0%
ATCACCTGAATCCATGTCAG+AGG - chr4_4:52977678-52977697 Msa0687940:intron 45.0%
CTACCCACAACTTCTAATGG+GGG + chr4_4:52977789-52977808 None:intergenic 45.0%
AGCAGTACAACAGGTCATCT+TGG - chr4_4:52977824-52977843 Msa0687940:intron 45.0%
!!! GGGGTTTTGAGGGATTAGTT+AGG + chr4_4:52978279-52978298 None:intergenic 45.0%
!! GAAGTTAGGAGGGGTTTTGA+GGG + chr4_4:52978289-52978308 None:intergenic 45.0%
! AGAAGTTAGGAGGGGTTTTG+AGG + chr4_4:52978290-52978309 None:intergenic 45.0%
CGAGACAACAAGAAGTTAGG+AGG + chr4_4:52978300-52978319 None:intergenic 45.0%
TTGCAGTCACCATCACTAAG+TGG - chr4_4:52978615-52978634 Msa0687940:intron 45.0%
TGCCTTAATAGGCTCTGTGT+TGG - chr4_4:52978844-52978863 Msa0687940:intron 45.0%
TTGTCATGTCAGCTTCACCT+GGG + chr4_4:52978940-52978959 None:intergenic 45.0%
TTTGTCATGTCAGCTTCACC+TGG + chr4_4:52978941-52978960 None:intergenic 45.0%
AGGAGCGAATGCTGTTATGA+GGG + chr4_4:52979024-52979043 None:intergenic 45.0%
TAGGAGCGAATGCTGTTATG+AGG + chr4_4:52979025-52979044 None:intergenic 45.0%
GGGAGATTGGTATTTGGCAT+AGG - chr4_4:52979065-52979084 Msa0687940:intron 45.0%
ATATTGTACGTACCCGGTAC+CGG + chr4_4:52979448-52979467 None:intergenic 45.0%
ACGTAACAGGAGTCTGATAC+GGG - chr4_4:52979668-52979687 Msa0687940:intron 45.0%
GATATGACATGCGTGCTTGT+AGG - chr4_4:52979740-52979759 Msa0687940:intron 45.0%
GCTGTCTCTGCAATGTACAT+TGG + chr4_4:52979935-52979954 None:intergenic 45.0%
! GAGACTAGTTGTCCACGTAT+TGG + chr4_4:52979965-52979984 None:intergenic 45.0%
CTGCACACATACGCAACATA+TGG + chr4_4:52980199-52980218 None:intergenic 45.0%
CATATGTTGCGTATGTGTGC+AGG - chr4_4:52980197-52980216 Msa0687940:intron 45.0%
!! GTATGGACTAGGTAGCTTGT+TGG - chr4_4:52980224-52980243 Msa0687940:intron 45.0%
! TTGTTGGTAGACACTGTTGC+TGG - chr4_4:52980240-52980259 Msa0687940:intron 45.0%
!! GCACGTAAAAGTATCCACCT+TGG + chr4_4:52980342-52980361 None:intergenic 45.0%
GAAATGTAGGACCTTGAAGC+TGG + chr4_4:52980422-52980441 None:intergenic 45.0%
ACCTTAGGGGAAATGTTTCG+TGG - chr4_4:52980513-52980532 Msa0687940:intron 45.0%
TCCACGAAACATTTCCCCTA+AGG + chr4_4:52980517-52980536 None:intergenic 45.0%
GTTTCGTGGAAAATGTCGGA+AGG - chr4_4:52980527-52980546 Msa0687940:intron 45.0%
CCAATCCTGCACTTATCACA+AGG + chr4_4:52980554-52980573 None:intergenic 45.0%
CCTTGTGATAAGTGCAGGAT+TGG - chr4_4:52980551-52980570 Msa0687940:intron 45.0%
TGCAAACTGTGACAGATCAC+GGG - chr4_4:52980663-52980682 Msa0687940:intron 45.0%
GTTGTCGTTGTTGACAGACT+TGG - chr4_4:52981198-52981217 Msa0687940:intron 45.0%
TCGTTGTTGACAGACTTGGA+AGG - chr4_4:52981202-52981221 Msa0687940:intron 45.0%
GGAAGGAGACCTTTACTACT+TGG - chr4_4:52981219-52981238 Msa0687940:intron 45.0%
AGGAGACCTTTACTACTTGG+CGG - chr4_4:52981222-52981241 Msa0687940:intron 45.0%
GAAACTCCGCCAAGTAGTAA+AGG + chr4_4:52981231-52981250 None:intergenic 45.0%
TTACTACTTGGCGGAGTTTC+AGG - chr4_4:52981231-52981250 Msa0687940:intron 45.0%
CATGTGGTTATTTGTGTGGC+AGG - chr4_4:52981405-52981424 Msa0687940:CDS 45.0%
!! GTTGGTTTGCTGCTCTATGT+TGG - chr4_4:52981493-52981512 Msa0687940:intron 45.0%
TCAGATTTCCTTTGGTCCGA+TGG - chr4_4:52981681-52981700 Msa0687940:intron 45.0%
CAGATTTCCTTTGGTCCGAT+GGG - chr4_4:52981682-52981701 Msa0687940:intron 45.0%
GCTATCATAAGCCAACCCAT+CGG + chr4_4:52981700-52981719 None:intergenic 45.0%
GGGAAAAGGCAAATGTAACC+AGG + chr4_4:52981795-52981814 None:intergenic 45.0%
! ATTTGCCTTTTCCCCACTGA+AGG - chr4_4:52981801-52981820 Msa0687940:intron 45.0%
TTACAGGATTTACTGGGAGC+AGG - chr4_4:52982051-52982070 Msa0687940:intron 45.0%
AGAGGAAAGTGGGGGTTGTT+CGG + chr4_4:52975178-52975197 None:intergenic 50.0%
CCCACTTTCCTCTTTCTCAC+AGG - chr4_4:52975185-52975204 Msa0687940:three_prime_UTR 50.0%
GAGGTGAACCTGTGAGAAAG+AGG + chr4_4:52975196-52975215 None:intergenic 50.0%
CCTTTCACTTGTAACCTCGG+TGG + chr4_4:52976088-52976107 None:intergenic 50.0%
CCACCGAGGTTACAAGTGAA+AGG - chr4_4:52976085-52976104 Msa0687940:CDS 50.0%
GAAAGGGAGCCTCTGCTTAA+TGG - chr4_4:52976102-52976121 Msa0687940:intron 50.0%
! GCAGAGAGGGAATAGTCTTG+AGG + chr4_4:52976138-52976157 None:intergenic 50.0%
CGGAAGAATTGCAGCAGAGA+GGG + chr4_4:52976151-52976170 None:intergenic 50.0%
ACGGAAGAATTGCAGCAGAG+AGG + chr4_4:52976152-52976171 None:intergenic 50.0%
CACCCATCCTCTATCCTTCA+TGG + chr4_4:52976411-52976430 None:intergenic 50.0%
GCTTTGCTTTGTCATGGGGA+AGG - chr4_4:52976435-52976454 Msa0687940:intron 50.0%
GTTCATGGAACTTTGTGCCG+TGG - chr4_4:52976513-52976532 Msa0687940:intron 50.0%
TGAAGGTGGCATATGGCATC+TGG + chr4_4:52976776-52976795 None:intergenic 50.0%
CTCACTTGTGTGGTTGCTCT+TGG - chr4_4:52976993-52977012 Msa0687940:CDS 50.0%
TGGTTGCTCTTGGCCTAATG+TGG - chr4_4:52977003-52977022 Msa0687940:CDS 50.0%
GCCTAATGTGGATGATCCCT+TGG - chr4_4:52977015-52977034 Msa0687940:CDS 50.0%
CCCAAGGGATCATCCACATT+AGG + chr4_4:52977019-52977038 None:intergenic 50.0%
GGCCAACACAGAGCCTATTA+AGG + chr4_4:52978849-52978868 None:intergenic 50.0%
CATGGATACGGGTACAGTAC+CGG - chr4_4:52979426-52979445 Msa0687940:intron 50.0%
! AGTTGTCCACGTATTGGCGT+TGG + chr4_4:52979959-52979978 None:intergenic 50.0%
! ACCTTCTGTTCTGAGCTTCC+AGG - chr4_4:52980158-52980177 Msa0687940:CDS 50.0%
ACCTGGAAGCTCAGAACAGA+AGG + chr4_4:52980162-52980181 None:intergenic 50.0%
CAAGCTACCTAGTCCATACC+CGG + chr4_4:52980223-52980242 None:intergenic 50.0%
TGGTAGACACTGTTGCTGGA+TGG - chr4_4:52980244-52980263 Msa0687940:intron 50.0%
TAGACACTGTTGCTGGATGG+CGG - chr4_4:52980247-52980266 Msa0687940:intron 50.0%
! GCTGGATGGCGGTATATGTT+TGG - chr4_4:52980258-52980277 Msa0687940:intron 50.0%
AGTATCCACCTTGGAGAAGC+TGG + chr4_4:52980333-52980352 None:intergenic 50.0%
! CGTAGTTTGTGCCAGCTTCA+AGG - chr4_4:52980408-52980427 Msa0687940:intron 50.0%
AAGGCCCTTGTGATAAGTGC+AGG - chr4_4:52980546-52980565 Msa0687940:intron 50.0%
GCAAACTGTGACAGATCACG+GGG - chr4_4:52980664-52980683 Msa0687940:intron 50.0%
ACCAAGGAGAATAGAGACCC+GGG + chr4_4:52980866-52980885 None:intergenic 50.0%
CACCAAGGAGAATAGAGACC+CGG + chr4_4:52980867-52980886 None:intergenic 50.0%
! GCAGCAGTTCTTGCTGTAGT+TGG - chr4_4:52981475-52981494 Msa0687940:intron 50.0%
TTTCCTTTGGTCCGATGGGT+TGG - chr4_4:52981686-52981705 Msa0687940:intron 50.0%
CCTTTGCCTCTCAAGCGTAA+GGG + chr4_4:52981733-52981752 None:intergenic 50.0%
TCCTTTGCCTCTCAAGCGTA+AGG + chr4_4:52981734-52981753 None:intergenic 50.0%
! CAATTTTGCGGCAAATGCCC+TGG - chr4_4:52981774-52981793 Msa0687940:intron 50.0%
CGTTACCTTCAGTGGGGAAA+AGG + chr4_4:52981809-52981828 None:intergenic 50.0%
AGTGTAAGCCCCTTGGTTTC+TGG + chr4_4:52982141-52982160 None:intergenic 50.0%
AACCAAGGGGCTTACACTAG+AGG - chr4_4:52982143-52982162 Msa0687940:intron 50.0%
TTCCTCTAGTGTAAGCCCCT+TGG + chr4_4:52982148-52982167 None:intergenic 50.0%
GAGGAAAGTGGGGGTTGTTC+GGG + chr4_4:52975177-52975196 None:intergenic 55.0%
GGAAGGAAAGTCATCCACCG+AGG - chr4_4:52976071-52976090 Msa0687940:CDS 55.0%
CTGTTAGTGGTCCTGTGCTG+AGG - chr4_4:52976324-52976343 Msa0687940:CDS 55.0%
AAACTAATGCGGCGGTGGTG+AGG - chr4_4:52976623-52976642 Msa0687940:intron 55.0%
TGTGTCGGATGCTGTTGTCG+TGG - chr4_4:52976850-52976869 Msa0687940:intron 55.0%
CTGTTGTCGTGGCAAGTGTG+AGG - chr4_4:52976861-52976880 Msa0687940:intron 55.0%
GGTGCCTCTGACATGGATTC+AGG + chr4_4:52977685-52977704 None:intergenic 55.0%
!! GAATCCATGTCAGAGGCACC+CGG - chr4_4:52977685-52977704 Msa0687940:intron 55.0%
CATGTCAGCTTCACCTGGGA+AGG + chr4_4:52978936-52978955 None:intergenic 55.0%
!! TACGGGTACAGTACCGGTAC+CGG - chr4_4:52979432-52979451 Msa0687940:intron 55.0%
ACAGCTCCAACGCCAATACG+TGG - chr4_4:52979950-52979969 Msa0687940:intron 55.0%
TGTTGCGTATGTGTGCAGGC+CGG - chr4_4:52980201-52980220 Msa0687940:intron 55.0%
GCGGCGTAGTAGAGAACACT+TGG + chr4_4:52980693-52980712 None:intergenic 55.0%
CTACGCCGCATCAATCCTAC+AGG - chr4_4:52980704-52980723 Msa0687940:intron 55.0%
CCTTAGCAGCTGATGCTACC+CGG - chr4_4:52980845-52980864 Msa0687940:intron 55.0%
CTTAGCAGCTGATGCTACCC+GGG - chr4_4:52980846-52980865 Msa0687940:intron 55.0%
ACCCGGGTCTCTATTCTCCT+TGG - chr4_4:52980862-52980881 Msa0687940:intron 55.0%
AAGCCAACCCATCGGACCAA+AGG + chr4_4:52981692-52981711 None:intergenic 55.0%
CCCTTACGCTTGAGAGGCAA+AGG - chr4_4:52981730-52981749 Msa0687940:intron 55.0%
GTTACCGGGTGCCTCTGACA+TGG + chr4_4:52977692-52977711 None:intergenic 60.0%
!! ACGGGTACAGTACCGGTACC+GGG - chr4_4:52979433-52979452 Msa0687940:intron 60.0%
GTTGCGTATGTGTGCAGGCC+GGG - chr4_4:52980202-52980221 Msa0687940:intron 60.0%
GTATGTGTGCAGGCCGGGTA+TGG - chr4_4:52980207-52980226 Msa0687940:intron 60.0%
GGTGGCTTCCAGCTTCTCCA+AGG - chr4_4:52980322-52980341 Msa0687940:intron 60.0%
GGCTTCCAGCTTCTCCAAGG+TGG - chr4_4:52980325-52980344 Msa0687940:intron 60.0%
CCGGGTAGCATCAGCTGCTA+AGG + chr4_4:52980848-52980867 None:intergenic 60.0%
GGGTCATGGGGTGAGCCCAA+GGG + chr4_4:52977034-52977053 None:intergenic 65.0%
TGGGTCATGGGGTGAGCCCA+AGG + chr4_4:52977035-52977054 None:intergenic 65.0%
GTGCAGGCCGGGTATGGACT+AGG - chr4_4:52980213-52980232 Msa0687940:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 52975141 52982395 52975141 ID=Msa0687940;Name=Msa0687940
chr4_4 mRNA 52975141 52982395 52975141 ID=Msa0687940-mRNA-1;Parent=Msa0687940;Name=Msa0687940-mRNA-1;_AED=0.14;_eAED=0.14;_QI=21|1|1|1|1|1|14|207|501
chr4_4 exon 52975141 52975479 52975141 ID=Msa0687940-mRNA-1:exon:14002;Parent=Msa0687940-mRNA-1
chr4_4 exon 52975714 52975851 52975714 ID=Msa0687940-mRNA-1:exon:14001;Parent=Msa0687940-mRNA-1
chr4_4 exon 52976011 52976109 52976011 ID=Msa0687940-mRNA-1:exon:14000;Parent=Msa0687940-mRNA-1
chr4_4 exon 52976279 52976359 52976279 ID=Msa0687940-mRNA-1:exon:13999;Parent=Msa0687940-mRNA-1
chr4_4 exon 52976642 52976704 52976642 ID=Msa0687940-mRNA-1:exon:13998;Parent=Msa0687940-mRNA-1
chr4_4 exon 52976811 52976858 52976811 ID=Msa0687940-mRNA-1:exon:13997;Parent=Msa0687940-mRNA-1
chr4_4 exon 52976949 52977317 52976949 ID=Msa0687940-mRNA-1:exon:13996;Parent=Msa0687940-mRNA-1
chr4_4 exon 52977518 52977619 52977518 ID=Msa0687940-mRNA-1:exon:13995;Parent=Msa0687940-mRNA-1
chr4_4 exon 52978439 52978563 52978439 ID=Msa0687940-mRNA-1:exon:13994;Parent=Msa0687940-mRNA-1
chr4_4 exon 52978646 52978712 52978646 ID=Msa0687940-mRNA-1:exon:13993;Parent=Msa0687940-mRNA-1
chr4_4 exon 52978856 52978915 52978856 ID=Msa0687940-mRNA-1:exon:13992;Parent=Msa0687940-mRNA-1
chr4_4 exon 52980107 52980185 52980107 ID=Msa0687940-mRNA-1:exon:13991;Parent=Msa0687940-mRNA-1
chr4_4 exon 52981367 52981464 52981367 ID=Msa0687940-mRNA-1:exon:13990;Parent=Msa0687940-mRNA-1
chr4_4 exon 52982330 52982395 52982330 ID=Msa0687940-mRNA-1:exon:13989;Parent=Msa0687940-mRNA-1
chr4_4 five_prime_UTR 52982375 52982395 52982375 ID=Msa0687940-mRNA-1:five_prime_utr;Parent=Msa0687940-mRNA-1
chr4_4 CDS 52982330 52982374 52982330 ID=Msa0687940-mRNA-1:cds;Parent=Msa0687940-mRNA-1
chr4_4 CDS 52981367 52981464 52981367 ID=Msa0687940-mRNA-1:cds;Parent=Msa0687940-mRNA-1
chr4_4 CDS 52980107 52980185 52980107 ID=Msa0687940-mRNA-1:cds;Parent=Msa0687940-mRNA-1
chr4_4 CDS 52978856 52978915 52978856 ID=Msa0687940-mRNA-1:cds;Parent=Msa0687940-mRNA-1
chr4_4 CDS 52978646 52978712 52978646 ID=Msa0687940-mRNA-1:cds;Parent=Msa0687940-mRNA-1
chr4_4 CDS 52978439 52978563 52978439 ID=Msa0687940-mRNA-1:cds;Parent=Msa0687940-mRNA-1
chr4_4 CDS 52977518 52977619 52977518 ID=Msa0687940-mRNA-1:cds;Parent=Msa0687940-mRNA-1
chr4_4 CDS 52976949 52977317 52976949 ID=Msa0687940-mRNA-1:cds;Parent=Msa0687940-mRNA-1
chr4_4 CDS 52976811 52976858 52976811 ID=Msa0687940-mRNA-1:cds;Parent=Msa0687940-mRNA-1
chr4_4 CDS 52976642 52976704 52976642 ID=Msa0687940-mRNA-1:cds;Parent=Msa0687940-mRNA-1
chr4_4 CDS 52976279 52976359 52976279 ID=Msa0687940-mRNA-1:cds;Parent=Msa0687940-mRNA-1
chr4_4 CDS 52976011 52976109 52976011 ID=Msa0687940-mRNA-1:cds;Parent=Msa0687940-mRNA-1
chr4_4 CDS 52975714 52975851 52975714 ID=Msa0687940-mRNA-1:cds;Parent=Msa0687940-mRNA-1
chr4_4 CDS 52975348 52975479 52975348 ID=Msa0687940-mRNA-1:cds;Parent=Msa0687940-mRNA-1
chr4_4 three_prime_UTR 52975141 52975347 52975141 ID=Msa0687940-mRNA-1:three_prime_utr;Parent=Msa0687940-mRNA-1
Gene Sequence

>Msa0687940

ATGGCGTCTGATCCCGAACAACCCCCACTTTCCTCTTTCTCACAGGAAGGAAAGTCATCCACCGAGGTTACAAGTGAAAGGGAGCCTCTGCTTAATGGAATTCATGGCCCTCAAGACTATTCCCTCTCTGCTGCAATTCTTCCATTTCTCTTCCCAGCTTTTGGTGGTCTACTATTTGGATATGATATTGGTGCCACATCTAGTGCAACAATTTCCATTCAGTCACCATCACTAAGTGGAATAACTTGGTATGACTTAGACGCTGTTGAAATTGGACTTCTTACTAGCGGATCATTATATGGTGCCTTAATAGGCTCTGTGTTGGCCTTCAATATTGCTGATTTCTTAGGGAGAAGAAGAGAGCTGCTTGTAGCTGCATTGATGTATCTTGTTGGAGCCCTCATAACAGCATTCGCTCCTAATTTTCCTTTATTGGTGATTGGGAGATTGGTATTTGGCATAGGAATTGGACTGGCAATGCATGCTGCTCCAATGTACATTGCAGAGACAGCTCCAACGCCAATACGTGGACAACTAGTCTCTTTGAAAGAGTTCTTTATAGTAATCGGAATTGTTGCCGGGTATGGACTAGGTAGCTTGTTGGTAGACACTGTTGCTGGATGGCGGTATATGTTTGGAATTAGTAGTCCTGTTGCAGTAATAATGGGATTTGGAATGTGGTGGCTTCCAGCTTCTCCAAGGTGGATACTTTTACGTGCTATACAGAAAAAGGGGGATCTTCAGACTTTGAAAGACACTGCAATTCGTAGTTTGTGCCAGCTTCAAGGTCCTACATTTCATGATTCTGCTTCTCAGCAAGTAGATGAGATTATGGCAGAGTTTTCTTATTTAGGTGAAGAAAATGATGTTACCTTAGGGGAAATGTTTCGTGGAAAATGTCGGAAGGCCCTTGTGATAAGTGCAGGATTGGTCTTGTTTCAACAGATCACGGGGCAACCAAGTGTTCTCTACTACGCCGCATCAATCCTACAGAGTGCAGGATTCTCCTTAGCAGCTGATGCTACCCGGGTCTCTATTCTCCTTGGTGTATTTAAGTTGATTATGACTGGAGTGGCTGTTGTCGTTGTTGACAGACTTGGAAGGAGACCTTTACTACTTGGCGGAGTTTCAGGAATAGTAATCTCATTATTCTTACTGGGTTCGTATTACATATTCTTGGATAATGCAGCAGTTCTTGCTGTAGTTGGTTTGCTGCTCTATGTTGGTTGTTATCAGATTTCCTTTGGTCCGATGGGTTGGCTTATGATAGCAGAGATTTTTCCCTTACGCTTGAGAGGCAAAGGACTTAGTATAGCAGTTCTCGTCAATTTTGCGGCAAATGCCCTGGTTACATTTGCCTTTTCCCCACTGAAGGATTTACTGGGAGCAGGAATTTTGTTTTACATATTTTCTGCAATAGCTGTGGCATCTCTTGTATTCATATACTTCATTGTACCAGAAACCAAGGGGCTTACACTAGAGGAAATTGAAGCAAAATGCCTGTAA
Protein sequence

>Msa0687940

MASDPEQPPLSSFSQEGKSSTEVTSEREPLLNGIHGPQDYSLSAAILPFLFPAFGGLLFGYDIGATSSATISIQSPSLSGITWYDLDAVEIGLLTSGSLYGALIGSVLAFNIADFLGRRRELLVAALMYLVGALITAFAPNFPLLVIGRLVFGIGIGLAMHAAPMYIAETAPTPIRGQLVSLKEFFIVIGIVAGYGLGSLLVDTVAGWRYMFGISSPVAVIMGFGMWWLPASPRWILLRAIQKKGDLQTLKDTAIRSLCQLQGPTFHDSASQQVDEIMAEFSYLGEENDVTLGEMFRGKCRKALVISAGLVLFQQITGQPSVLYYAASILQSAGFSLAADATRVSILLGVFKLIMTGVAVVVVDRLGRRPLLLGGVSGIVISLFLLGSYYIFLDNAAVLAVVGLLLYVGCYQISFGPMGWLMIAEIFPLRLRGKGLSIAVLVNFAANALVTFAFSPLKDLLGAGILFYIFSAIAVASLVFIYFIVPETKGLTLEEIEAKCL*