AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0554570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0554570 MtrunA17_Chr4g0039651 99.002 501 5 0 1 501 1 501 0.0 974
Msa0554570 MtrunA17_Chr4g0032021 61.066 488 177 3 17 501 78 555 0.0 578
Msa0554570 MtrunA17_Chr6g0485661 31.791 497 304 8 8 490 25 500 8.82e-74 242
Msa0554570 MtrunA17_Chr3g0144361 32.193 497 301 8 18 497 11 488 1.37e-73 241
Msa0554570 MtrunA17_Chr4g0034681 32.213 506 297 13 14 498 9 489 1.52e-68 228
Msa0554570 MtrunA17_Chr4g0021771 28.070 513 315 11 9 497 17 499 4.55e-67 224
Msa0554570 MtrunA17_Chr5g0432581 30.561 481 308 6 32 497 10 479 2.96e-66 222
Msa0554570 MtrunA17_Chr4g0036021 31.546 485 293 9 36 497 16 484 4.35e-66 222
Msa0554570 MtrunA17_Chr8g0390521 32.068 474 290 9 38 498 15 469 5.44e-65 218
Msa0554570 MtrunA17_Chr2g0282031 30.146 481 288 10 35 497 47 497 7.45e-65 219
Msa0554570 MtrunA17_Chr1g0213631 33.503 394 242 6 112 497 48 429 6.30e-63 212
Msa0554570 MtrunA17_Chr7g0214451 32.026 459 271 8 55 497 43 476 1.31e-60 207
Msa0554570 MtrunA17_Chr8g0373531 29.895 475 307 6 38 497 16 479 4.07e-60 206
Msa0554570 MtrunA17_Chr7g0259471 31.417 487 288 14 27 498 16 471 3.86e-59 202
Msa0554570 MtrunA17_Chr1g0213611 30.217 460 286 6 53 497 86 525 1.66e-58 202
Msa0554570 MtrunA17_Chr6g0457781 31.780 472 282 11 37 497 97 539 1.97e-57 199
Msa0554570 MtrunA17_Chr7g0259221 31.224 490 285 14 27 498 18 473 2.46e-57 197
Msa0554570 MtrunA17_Chr1g0155221 30.642 483 296 11 26 497 31 485 7.18e-57 196
Msa0554570 MtrunA17_Chr7g0250881 31.155 459 291 7 43 497 62 499 1.09e-55 194
Msa0554570 MtrunA17_Chr4g0066581 28.770 504 317 11 4 501 19 486 6.91e-55 191
Msa0554570 MtrunA17_Chr8g0373181 31.739 460 273 12 50 497 52 482 1.40e-54 190
Msa0554570 MtrunA17_Chr7g0273281 30.040 496 310 9 11 497 25 492 2.78e-54 190
Msa0554570 MtrunA17_Chr2g0286721 26.423 492 322 8 13 498 24 481 3.82e-51 181
Msa0554570 MtrunA17_Chr1g0205681 29.876 482 292 11 43 496 21 484 1.61e-50 180
Msa0554570 MtrunA17_Chr4g0065311 30.526 475 288 11 46 496 22 478 1.04e-49 177
Msa0554570 MtrunA17_Chr1g0205671 29.897 485 291 12 44 499 22 486 2.94e-49 176
Msa0554570 MtrunA17_Chr3g0115711 28.992 476 300 10 44 496 22 482 4.41e-48 173
Msa0554570 MtrunA17_Chr8g0390141 30.998 471 279 12 53 496 34 485 6.16e-48 173
Msa0554570 MtrunA17_Chr6g0486681 29.661 472 284 11 53 496 34 485 7.86e-48 172
Msa0554570 MtrunA17_Chr6g0486671 29.661 472 284 11 53 496 34 485 7.86e-48 172
Msa0554570 MtrunA17_Chr3g0085971 29.668 482 291 13 46 497 22 485 2.19e-47 171
Msa0554570 MtrunA17_Chr5g0394341 29.752 484 290 15 46 499 23 486 7.43e-47 170
Msa0554570 MtrunA17_Chr5g0417611 29.375 480 283 12 53 498 31 488 1.32e-46 169
Msa0554570 MtrunA17_Chr5g0420841 30.000 500 295 15 33 497 6 485 1.38e-46 169
Msa0554570 MtrunA17_Chr6g0486021 28.980 490 319 10 14 497 17 483 2.30e-46 168
Msa0554570 MtrunA17_Chr1g0205691 30.105 475 286 11 53 499 30 486 4.12e-46 168
Msa0554570 MtrunA17_Chr8g0373191 30.556 468 260 14 46 499 40 456 7.86e-46 166
Msa0554570 MtrunA17_Chr3g0115751 27.789 475 304 11 46 496 29 488 1.24e-45 167
Msa0554570 MtrunA17_Chr3g0115741 27.368 475 306 11 46 496 27 486 1.71e-45 166
Msa0554570 MtrunA17_Chr4g0065324 28.842 475 296 9 46 496 30 486 1.88e-45 166
Msa0554570 MtrunA17_Chr4g0004821 29.148 446 285 7 58 497 49 469 2.25e-45 165
Msa0554570 MtrunA17_Chr5g0445601 30.159 504 300 13 19 496 7 484 5.04e-45 165
Msa0554570 MtrunA17_Chr3g0078971 28.512 477 300 10 46 497 24 484 8.44e-45 164
Msa0554570 MtrunA17_Chr3g0128081 28.421 475 292 12 53 497 30 486 3.93e-44 162
Msa0554570 MtrunA17_Chr3g0119401 28.373 504 332 11 1 497 48 529 4.21e-44 163
Msa0554570 MtrunA17_Chr3g0115721 28.921 491 303 13 32 496 13 483 4.40e-44 162
Msa0554570 MtrunA17_Chr8g0390261 28.298 470 293 12 53 496 34 485 1.45e-43 161
Msa0554570 MtrunA17_Chr4g0048411 29.661 472 289 11 53 497 31 486 4.57e-43 160
Msa0554570 MtrunA17_Chr3g0115781 27.651 481 299 13 46 497 26 486 2.28e-42 157
Msa0554570 MtrunA17_Chr1g0164851 28.662 471 293 9 53 497 31 484 5.01e-42 157
Msa0554570 MtrunA17_Chr1g0164871 28.450 471 294 9 53 497 31 484 7.75e-42 156
Msa0554570 MtrunA17_Chr2g0303731 31.343 335 213 6 55 386 36 356 1.33e-41 157
Msa0554570 MtrunA17_Chr2g0303731 41.414 99 58 0 399 497 452 550 1.71e-14 76.3
Msa0554570 MtrunA17_Chr3g0078991 26.947 475 311 10 46 497 24 485 2.78e-41 154
Msa0554570 MtrunA17_Chr2g0303701 33.134 335 204 7 55 386 36 353 3.14e-41 155
Msa0554570 MtrunA17_Chr8g0376601 33.913 345 210 7 46 386 26 356 4.48e-41 155
Msa0554570 MtrunA17_Chr5g0437021 27.381 504 305 14 30 497 6 484 1.72e-40 152
Msa0554570 MtrunA17_Chr3g0128171 27.610 431 272 9 86 497 30 439 2.00e-40 151
Msa0554570 MtrunA17_Chr7g0257631 29.560 477 290 11 46 496 62 518 3.34e-40 152
Msa0554570 MtrunA17_Chr5g0403831 26.253 419 281 7 102 498 81 493 4.00e-39 149
Msa0554570 MtrunA17_Chr3g0078791 29.274 427 250 10 85 496 21 410 9.34e-39 146
Msa0554570 MtrunA17_Chr4g0048051 29.299 471 292 11 53 497 31 486 1.10e-35 139
Msa0554570 MtrunA17_Chr8g0376611 29.617 287 181 4 94 373 4 276 1.69e-34 135
Msa0554570 MtrunA17_Chr8g0376611 35.354 99 64 0 399 497 382 480 3.83e-11 65.5
Msa0554570 MtrunA17_Chr7g0273261 33.621 232 144 5 273 499 10 236 2.64e-34 129
Msa0554570 MtrunA17_Chr8g0376631 30.031 323 207 7 55 373 36 343 1.06e-33 134
Msa0554570 MtrunA17_Chr8g0376631 40.404 99 59 0 399 497 451 549 3.24e-14 75.1
Msa0554570 MtrunA17_Chr3g0121674 31.293 294 182 6 211 496 1 282 3.55e-33 128
Msa0554570 MtrunA17_Chr2g0290181 28.909 339 219 7 55 386 37 360 9.12e-33 131
Msa0554570 MtrunA17_Chr2g0290181 43.000 100 57 0 398 497 454 553 4.42e-15 77.8
Msa0554570 MtrunA17_Chr4g0065351 29.651 344 200 9 171 496 2 321 1.68e-27 113
Msa0554570 MtrunA17_Chr2g0290161 29.137 278 157 5 114 386 25 267 1.10e-26 112
Msa0554570 MtrunA17_Chr2g0290161 41.000 100 59 0 398 497 361 460 1.95e-11 66.2
Msa0554570 MtrunA17_Chr3g0115731 26.008 496 290 18 32 496 13 462 3.46e-26 111
Msa0554570 MtrunA17_Chr5g0404191 31.727 249 146 7 38 286 44 268 1.06e-22 98.6
Msa0554570 MtrunA17_Chr3g0146061 28.464 267 175 6 245 496 458 723 1.27e-21 98.6
Msa0554570 MtrunA17_Chr3g0146061 34.146 164 104 3 92 251 46 209 6.16e-16 80.9
Msa0554570 MtrunA17_Chr3g0144261 30.374 214 138 4 42 251 1 207 1.50e-20 95.5
Msa0554570 MtrunA17_Chr3g0144261 33.654 208 126 5 301 496 506 713 5.39e-20 93.6
Msa0554570 MtrunA17_Chr5g0434231 30.065 153 83 1 94 246 7 135 7.12e-20 86.3
Msa0554570 MtrunA17_Chr5g0407441 32.212 208 120 7 54 251 13 209 1.86e-19 92.0
Msa0554570 MtrunA17_Chr5g0407441 31.100 209 130 4 301 496 498 705 4.57e-15 78.2
Msa0554570 MtrunA17_Chr5g0419321 32.143 168 102 4 92 251 74 237 1.65e-18 89.0
Msa0554570 MtrunA17_Chr5g0419321 29.327 208 135 3 301 496 524 731 1.53e-14 76.6
Msa0554570 MtrunA17_Chr8g0370141 29.661 236 140 6 53 286 12 223 2.15e-17 84.0
Msa0554570 MtrunA17_Chr8g0370151 30.622 209 131 3 301 496 137 344 4.96e-17 82.8
Msa0554570 MtrunA17_Chr7g0273271 29.688 192 121 3 46 236 28 206 4.55e-16 77.0
Msa0554570 MtrunA17_Chr5g0446681 33.094 139 70 1 53 191 30 145 7.51e-15 75.1
Msa0554570 MtrunA17_Chr5g0404181 39.000 100 60 1 398 497 30 128 2.05e-13 67.4
Msa0554570 MtrunA17_Chr2g0319001 24.312 436 266 19 87 495 119 517 5.14e-12 68.2
Msa0554570 MtrunA17_Chr5g0434251 35.354 99 64 0 399 497 38 136 6.78e-12 63.5
Msa0554570 MtrunA17_Chr4g0042131 23.747 379 259 11 114 488 50 402 2.94e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0554570 AT5G17010.1 72.565 503 136 2 1 501 1 503 0.0 750
Msa0554570 AT5G17010.3 72.565 503 136 2 1 501 1 503 0.0 750
Msa0554570 AT5G17010.4 72.565 503 136 2 1 501 1 503 0.0 750
Msa0554570 AT3G03090.1 66.998 503 164 1 1 501 1 503 0.0 697
Msa0554570 AT5G59250.1 62.179 468 174 2 37 501 90 557 0.0 585
Msa0554570 AT5G17010.2 57.708 506 143 6 1 501 1 440 0.0 554
Msa0554570 AT3G18830.1 30.572 507 315 8 5 497 12 495 1.51e-71 237
Msa0554570 AT4G36670.1 31.535 482 295 8 36 498 12 477 6.72e-69 229
Msa0554570 AT5G27360.1 32.927 492 288 11 16 498 8 466 4.23e-67 224
Msa0554570 AT5G27360.3 32.724 492 289 11 16 498 56 514 1.02e-66 224
Msa0554570 AT2G20780.1 31.014 503 300 12 11 497 26 497 2.04e-66 223
Msa0554570 AT2G16130.1 30.876 502 314 7 14 498 2 487 2.17e-64 218
Msa0554570 AT2G16120.1 31.311 511 298 10 14 497 2 486 3.43e-64 217
Msa0554570 AT2G18480.1 32.244 459 277 9 59 497 36 480 2.44e-63 214
Msa0554570 AT5G27350.1 30.204 490 303 10 15 497 4 461 1.87e-62 211
Msa0554570 AT3G05150.1 30.691 492 301 12 18 498 5 467 2.62e-62 211
Msa0554570 AT3G05150.3 30.691 492 301 12 18 498 5 467 2.62e-62 211
Msa0554570 AT2G20780.2 33.174 419 253 8 89 497 38 439 3.11e-62 211
Msa0554570 AT3G05150.2 30.691 492 301 12 18 498 5 467 3.69e-62 211
Msa0554570 AT3G05165.3 31.211 487 296 11 22 499 6 462 1.26e-61 209
Msa0554570 AT3G05165.2 31.211 487 296 11 22 499 6 462 1.26e-61 209
Msa0554570 AT3G05165.1 31.211 487 296 11 22 499 6 462 1.26e-61 209
Msa0554570 AT3G05160.1 31.185 481 294 10 27 499 2 453 9.06e-59 201
Msa0554570 AT2G43330.1 32.969 458 270 8 55 497 41 476 1.78e-58 202
Msa0554570 AT3G05160.3 33.005 406 243 8 101 499 21 404 1.07e-57 197
Msa0554570 AT3G05160.2 33.005 406 243 8 101 499 21 404 1.07e-57 197
Msa0554570 AT5G27360.2 33.938 386 224 8 122 499 1 363 1.09e-57 196
Msa0554570 AT5G27360.5 33.938 386 224 8 122 499 1 363 1.09e-57 196
Msa0554570 AT2G48020.2 30.833 480 295 11 27 498 9 459 1.09e-56 196
Msa0554570 AT2G48020.1 30.833 480 295 11 27 498 9 459 1.09e-56 196
Msa0554570 AT5G18840.1 28.543 494 316 9 15 498 10 476 3.80e-56 195
Msa0554570 AT3G19940.1 31.524 479 281 11 46 496 26 485 9.34e-55 192
Msa0554570 AT5G16150.2 32.251 462 282 10 43 497 102 539 4.11e-54 191
Msa0554570 AT5G16150.1 32.251 462 282 10 43 497 102 539 4.11e-54 191
Msa0554570 AT5G16150.3 32.251 462 282 10 43 497 102 539 4.11e-54 191
Msa0554570 AT1G54730.2 30.155 451 277 10 55 497 42 462 5.17e-54 189
Msa0554570 AT1G08930.1 27.800 500 318 10 8 498 24 489 7.44e-54 189
Msa0554570 AT1G08930.2 27.800 500 318 10 8 498 24 489 7.44e-54 189
Msa0554570 AT1G50310.1 31.070 486 275 12 46 496 26 486 1.38e-52 186
Msa0554570 AT4G02050.2 30.309 485 292 11 38 496 20 484 6.17e-51 181
Msa0554570 AT4G02050.1 30.309 485 292 11 38 496 20 484 6.17e-51 181
Msa0554570 AT5G23270.1 30.146 481 273 13 53 496 32 486 7.03e-51 181
Msa0554570 AT3G05165.6 29.783 460 283 11 22 470 6 436 1.31e-49 178
Msa0554570 AT1G19450.1 30.658 486 295 14 25 498 30 485 6.36e-49 176
Msa0554570 AT3G05165.4 29.372 446 279 9 22 459 6 423 1.36e-48 174
Msa0554570 AT3G05165.5 29.372 446 279 9 22 459 6 423 1.36e-48 174
Msa0554570 AT1G75220.1 29.132 484 305 10 25 498 29 484 5.23e-48 173
Msa0554570 AT1G67300.2 29.778 450 280 7 58 497 64 487 5.95e-48 173
Msa0554570 AT1G79820.2 30.580 448 278 9 57 497 66 487 1.33e-47 172
Msa0554570 AT1G79820.1 30.580 448 278 9 57 497 66 487 1.33e-47 172
Msa0554570 AT5G26340.1 29.253 482 295 12 46 499 24 487 4.62e-47 171
Msa0554570 AT1G67300.1 29.399 449 282 7 58 497 64 486 5.27e-47 170
Msa0554570 AT1G67300.3 29.399 449 282 7 58 497 64 486 5.27e-47 170
Msa0554570 AT1G77210.2 30.462 476 275 13 53 496 34 485 1.33e-46 169
Msa0554570 AT1G77210.1 30.462 476 275 13 53 496 34 485 1.33e-46 169
Msa0554570 AT1G11260.1 28.875 471 292 10 53 496 31 485 4.25e-46 169
Msa0554570 AT3G05155.1 27.719 469 296 11 43 499 20 457 1.03e-44 163
Msa0554570 AT5G27360.4 30.986 426 253 10 16 432 8 401 1.64e-44 162
Msa0554570 AT1G08900.5 29.524 420 269 8 86 499 17 415 1.74e-44 162
Msa0554570 AT1G08900.1 29.452 438 281 9 69 499 41 457 2.08e-44 162
Msa0554570 AT1G08900.2 29.452 438 281 9 69 499 41 457 2.08e-44 162
Msa0554570 AT1G05030.1 28.319 452 293 7 53 497 87 514 2.45e-44 164
Msa0554570 AT1G54730.5 28.000 450 267 10 55 497 42 441 2.63e-44 162
Msa0554570 AT1G08900.3 29.286 420 270 8 86 499 51 449 3.44e-44 162
Msa0554570 AT1G54730.3 28.979 421 262 9 55 467 42 433 5.29e-44 161
Msa0554570 AT3G05400.1 28.539 445 284 9 59 497 40 456 9.47e-43 158
Msa0554570 AT1G08890.1 28.337 487 307 12 22 497 2 457 1.41e-42 157
Msa0554570 AT3G19930.1 26.789 489 308 9 39 497 16 484 1.86e-42 158
Msa0554570 AT3G19930.2 26.789 489 308 9 39 497 16 484 1.86e-42 158
Msa0554570 AT3G05960.1 28.151 476 286 11 53 497 29 479 2.28e-42 158
Msa0554570 AT1G34580.1 28.425 489 307 11 36 496 14 487 1.16e-41 156
Msa0554570 AT1G05030.2 28.504 421 275 6 84 497 61 462 1.24e-41 155
Msa0554570 AT4G04750.1 27.778 504 316 14 6 498 3 469 2.51e-41 154
Msa0554570 AT4G04750.2 27.778 504 316 14 6 498 3 469 2.51e-41 154
Msa0554570 AT4G21480.1 28.814 472 291 9 53 497 31 484 2.60e-41 155
Msa0554570 AT1G30220.1 32.258 372 223 9 34 390 6 363 4.25e-41 155
Msa0554570 AT1G30220.1 38.462 104 64 0 394 497 450 553 1.41e-13 73.6
Msa0554570 AT4G04750.3 28.233 464 291 12 46 498 81 513 4.84e-41 154
Msa0554570 AT5G26250.1 28.723 470 291 12 53 497 30 480 1.08e-40 153
Msa0554570 AT3G20460.1 26.087 506 333 11 1 498 12 484 2.43e-40 152
Msa0554570 AT1G08920.1 26.566 463 296 9 50 499 33 464 2.59e-40 152
Msa0554570 AT1G07340.1 27.950 483 283 13 53 499 31 484 5.73e-40 151
Msa0554570 AT4G04760.1 27.056 462 300 10 46 498 32 465 2.95e-39 149
Msa0554570 AT1G34580.2 29.496 417 263 9 96 496 36 437 5.31e-39 147
Msa0554570 AT1G67300.6 28.218 404 253 8 58 450 64 441 1.15e-38 147
Msa0554570 AT1G67300.7 28.218 404 253 8 58 450 64 441 1.15e-38 147
Msa0554570 AT1G79820.4 29.873 395 244 9 57 444 66 434 2.04e-38 146
Msa0554570 AT1G08920.2 26.170 470 296 10 50 499 33 471 2.42e-38 146
Msa0554570 AT1G67300.4 28.316 392 246 7 58 440 64 429 2.95e-38 145
Msa0554570 AT1G67300.5 28.316 392 246 7 58 440 64 429 2.95e-38 145
Msa0554570 AT4G04760.3 27.764 407 264 9 101 498 21 406 3.11e-38 145
Msa0554570 AT3G05400.2 26.966 445 271 10 59 497 40 436 1.09e-36 141
Msa0554570 AT2G35740.1 30.058 346 228 7 55 397 36 370 1.11e-36 143
Msa0554570 AT2G35740.1 39.394 99 60 0 399 497 458 556 3.25e-13 72.4
Msa0554570 AT1G54730.9 28.684 380 234 9 55 426 42 392 7.93e-36 138
Msa0554570 AT1G54730.7 28.684 380 234 9 55 426 42 392 7.93e-36 138
Msa0554570 AT4G04760.2 26.652 469 290 12 46 498 32 462 3.70e-35 137
Msa0554570 AT5G61520.1 27.021 470 303 10 53 496 32 487 7.42e-35 137
Msa0554570 AT1G54730.4 26.667 420 252 9 55 467 42 412 1.46e-34 134
Msa0554570 AT4G16480.2 29.345 351 210 7 55 390 37 364 2.43e-34 136
Msa0554570 AT4G16480.2 41.414 99 58 0 399 497 459 557 1.64e-14 76.6
Msa0554570 AT4G16480.3 29.345 351 210 7 55 390 37 364 2.43e-34 136
Msa0554570 AT4G16480.3 41.414 99 58 0 399 497 459 557 1.64e-14 76.6
Msa0554570 AT4G16480.1 29.345 351 210 7 55 390 37 364 2.43e-34 136
Msa0554570 AT4G16480.1 41.414 99 58 0 399 497 459 557 1.64e-14 76.6
Msa0554570 AT2G48020.4 28.866 388 240 10 27 406 9 368 2.44e-34 133
Msa0554570 AT1G50310.2 30.748 361 203 10 158 496 8 343 7.26e-34 132
Msa0554570 AT5G61520.2 27.711 415 275 10 93 496 39 439 7.46e-34 133
Msa0554570 AT1G08900.4 27.919 394 257 8 69 455 41 414 8.78e-33 130
Msa0554570 AT1G77210.3 31.006 358 204 12 158 496 3 336 1.90e-31 124
Msa0554570 AT2G48020.3 28.653 349 219 8 27 373 9 329 9.02e-31 122
Msa0554570 AT1G08920.3 24.242 429 282 8 50 465 33 431 1.06e-29 121
Msa0554570 AT1G54730.11 29.283 321 196 8 55 373 42 333 7.78e-29 117
Msa0554570 AT3G05155.2 28.274 336 206 9 43 373 20 325 8.98e-28 114
Msa0554570 AT1G54730.8 26.121 379 224 9 55 426 42 371 1.33e-26 111
Msa0554570 AT1G54730.10 28.975 283 176 6 55 336 42 300 7.62e-24 102
Msa0554570 AT1G54730.6 28.975 283 176 6 55 336 42 300 7.62e-24 102
Msa0554570 AT1G20840.2 33.482 224 131 5 42 263 1 208 9.45e-22 99.4
Msa0554570 AT1G20840.2 31.731 208 130 3 301 496 508 715 1.82e-17 86.3
Msa0554570 AT1G20840.1 33.482 224 131 5 42 263 1 208 9.45e-22 99.4
Msa0554570 AT1G20840.1 31.731 208 130 3 301 496 508 715 1.82e-17 86.3
Msa0554570 AT4G35300.4 34.634 205 117 7 55 251 14 209 2.20e-19 92.0
Msa0554570 AT4G35300.4 32.212 208 129 3 301 496 515 722 6.68e-19 90.5
Msa0554570 AT4G35300.8 34.634 205 117 7 55 251 14 209 2.20e-19 92.0
Msa0554570 AT4G35300.8 32.212 208 129 3 301 496 515 722 6.68e-19 90.5
Msa0554570 AT4G35300.6 34.634 205 117 7 55 251 14 209 2.20e-19 92.0
Msa0554570 AT4G35300.6 32.212 208 129 3 301 496 515 722 6.68e-19 90.5
Msa0554570 AT4G35300.11 34.634 205 117 7 55 251 14 209 2.20e-19 92.0
Msa0554570 AT4G35300.11 32.212 208 129 3 301 496 515 722 6.68e-19 90.5
Msa0554570 AT4G35300.1 34.634 205 117 7 55 251 14 209 2.20e-19 92.0
Msa0554570 AT4G35300.1 32.212 208 129 3 301 496 515 722 6.68e-19 90.5
Msa0554570 AT4G35300.10 34.634 205 117 7 55 251 14 209 2.20e-19 92.0
Msa0554570 AT4G35300.10 32.212 208 129 3 301 496 515 722 6.68e-19 90.5
Msa0554570 AT4G35300.7 34.634 205 117 7 55 251 14 209 2.20e-19 92.0
Msa0554570 AT4G35300.7 32.212 208 129 3 301 496 515 722 6.68e-19 90.5
Msa0554570 AT4G35300.9 34.634 205 117 7 55 251 14 209 2.34e-19 92.0
Msa0554570 AT4G35300.9 32.212 208 129 2 301 496 505 712 6.26e-19 90.9
Msa0554570 AT4G35300.2 34.634 205 117 7 55 251 14 209 2.34e-19 92.0
Msa0554570 AT4G35300.2 32.212 208 129 2 301 496 505 712 6.26e-19 90.9
Msa0554570 AT4G35300.3 34.634 205 117 7 55 251 14 209 2.34e-19 92.0
Msa0554570 AT4G35300.3 32.212 208 129 2 301 496 505 712 6.26e-19 90.9
Msa0554570 AT4G35300.5 32.212 208 129 3 301 496 318 525 4.83e-19 90.5
Msa0554570 AT3G51490.1 31.193 218 133 7 42 251 1 209 2.61e-18 88.6
Msa0554570 AT3G51490.1 28.302 212 138 4 294 496 502 708 1.01e-15 80.5
Msa0554570 AT3G51490.2 31.193 218 133 7 42 251 1 209 2.75e-18 88.6
Msa0554570 AT3G51490.2 28.372 215 142 4 294 496 502 716 5.34e-18 87.8
Msa0554570 AT3G51490.3 28.372 215 142 4 294 496 452 666 3.45e-18 88.2
Msa0554570 AT3G51490.3 33.962 159 99 4 98 251 2 159 1.92e-16 82.8
Msa0554570 AT1G79820.3 31.522 184 119 2 57 239 66 243 8.48e-17 83.2
Msa0554570 AT1G79820.3 35.802 162 101 1 339 497 278 439 2.28e-16 82.0
Msa0554570 AT1G79820.5 35.802 162 101 1 339 497 216 377 4.52e-16 80.5

Find 143 sgRNAs with CRISPR-Local

Find 468 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTGTAAGCCCCTTGGTTTC+TGG 0.113255 4_1:-51951775 None:intergenic
TTTACGTGCTATACAGAAAA+AGG 0.163557 4_1:+51949990 Msa0554570:CDS
TTACTACTTGGCGGAGTTTC+AGG 0.164053 4_1:+51950868 Msa0554570:CDS
TATTCTCCTTGGTGTATTTA+AGG 0.200907 4_1:+51950510 Msa0554570:CDS
GGTAATCTCATTATTCTTAC+TGG 0.215288 4_1:+51951063 Msa0554570:intron
AGATTTCTCTTCCCAGCTTT+TGG 0.224004 4_1:+51946986 Msa0554570:intron
TTCAATATTGCTGATTTCTT+AGG 0.227293 4_1:+51948506 Msa0554570:CDS
TCATTATATGGTGCCTTAAT+AGG 0.228572 4_1:+51948470 Msa0554570:CDS
CATTAAGTAATAATGAATTT+AGG 0.255300 4_1:+51951932 Msa0554570:three_prime_UTR
GACTTAGACGCTGTTGAAAT+TGG 0.258547 4_1:+51948288 Msa0554570:CDS
GAAAGGGAGCCTCTGCTTAA+TGG 0.270346 4_1:+51945739 Msa0554570:CDS
CTCTACTTTACAGGATTTAC+TGG 0.274020 4_1:+51951681 Msa0554570:intron
AAAGAGTTCTTTATAGTAAT+CGG 0.294855 4_1:+51949626 Msa0554570:CDS
TTTATTGGTGATTGGGAGAT+TGG 0.298663 4_1:+51948689 Msa0554570:CDS
GTGATTGGGAGATTGGTATT+TGG 0.307535 4_1:+51948696 Msa0554570:CDS
GCTCTATGTTGGTTGTTATC+AGG 0.308785 4_1:+51951141 Msa0554570:CDS
TAGTGCAACAATTTCCATTC+AGG 0.310363 4_1:+51947045 Msa0554570:CDS
ATCACCAATAAAGGAAAATT+AGG 0.310660 4_1:-51948678 None:intergenic
TAGTCCTGTTGCAGTAATAA+TGG 0.310720 4_1:+51949924 Msa0554570:CDS
TTGGTATTTGGCATAGGAAT+TGG 0.315973 4_1:+51948708 Msa0554570:CDS
CACAATTTCGTTACCTTCAG+TGG 0.329961 4_1:-51951451 None:intergenic
CTACTATTTGGATATGATAT+TGG 0.335588 4_1:+51947013 Msa0554570:CDS
GTTGCAGTAATAATGGGATT+TGG 0.338250 4_1:+51949931 Msa0554570:CDS
CAGACTAGCGGATCATTATA+TGG 0.341799 4_1:+51948458 Msa0554570:intron
AATCTCCCAATCACCAATAA+AGG 0.355733 4_1:-51948687 None:intergenic
GGGTTCGTATTACATATTCT+TGG 0.359010 4_1:+51951084 Msa0554570:CDS
GAAGAAAATGATGTTACCTT+AGG 0.368047 4_1:+51950135 Msa0554570:CDS
TCAGCAAGTAGATGAGATTA+TGG 0.386547 4_1:+51950092 Msa0554570:CDS
GGCCAACACAGAGCCTATTA+AGG 0.394009 4_1:-51948483 None:intergenic
CGTAGTTTGTGCCAGCTTCA+AGG 0.400533 4_1:+51950045 Msa0554570:CDS
AGTATCCACCTTGGAGAAGC+TGG 0.401630 4_1:-51949967 None:intergenic
TCAGATTTCCTTTGGTCCGA+TGG 0.401941 4_1:+51951318 Msa0554570:intron
CGTTACCTTCAGTGGGGAAA+AGG 0.405272 4_1:-51951443 None:intergenic
AAGAAAATGATGTTACCTTA+GGG 0.418967 4_1:+51950136 Msa0554570:CDS
TTGTCTGTTTACTACGGGAT+TGG 0.420400 4_1:+51951969 Msa0554570:three_prime_UTR
AATCCCATTATTACTGCAAC+AGG 0.420607 4_1:-51949928 None:intergenic
GCTGGATGGCGGTATATGTT+TGG 0.420780 4_1:+51949895 Msa0554570:CDS
CCTCTGCTTAATGGAATTCA+TGG 0.423680 4_1:+51945748 Msa0554570:CDS
GCAGCAGTTCTTGCTGTAGT+TGG 0.435391 4_1:+51951112 Msa0554570:CDS
AGTCCTGTTGCAGTAATAAT+GGG 0.436387 4_1:+51949925 Msa0554570:CDS
AGGATTGGTCTTGTTTCAAC+AGG 0.437529 4_1:+51950203 Msa0554570:CDS
CCCACTTTCCTCTTTCTCAC+AGG 0.444967 4_1:+51944822 Msa0554570:CDS
GGAAGGAGACCTTTACTACT+TGG 0.445419 4_1:+51950856 Msa0554570:CDS
TTGTTGGTAGACACTGTTGC+TGG 0.445619 4_1:+51949877 Msa0554570:CDS
GTAACAAGGTGACAGATTAC+AGG 0.446359 4_1:-51951819 None:intergenic
CAGATTTCCTTTGGTCCGAT+GGG 0.447732 4_1:+51951319 Msa0554570:intron
TTTACTACGGGATTGGATCA+TGG 0.449191 4_1:+51951976 Msa0554570:three_prime_UTR
TAAGAAATCAGCAATATTGA+AGG 0.456894 4_1:-51948504 None:intergenic
TTCCTCTAGTGTAAGCCCCT+TGG 0.456973 4_1:-51951782 None:intergenic
AATAGTAGACCACCAAAAGC+TGG 0.457373 4_1:-51946998 None:intergenic
TTTCCTTTGGTCCGATGGGT+TGG 0.457492 4_1:+51951323 Msa0554570:CDS
TAGGAGCGAATGCTGTTATG+AGG 0.458082 4_1:-51948659 None:intergenic
AGTAGAATGGTTTACCTGAA+TGG 0.459349 4_1:-51947059 None:intergenic
ACCCGGGTCTCTATTCTCCT+TGG 0.463268 4_1:+51950499 Msa0554570:CDS
GCTGCATTGATGTATCTTGT+TGG 0.463538 4_1:+51948633 Msa0554570:CDS
TTGTTGTAGTTGATTATGAC+TGG 0.472079 4_1:+51950805 Msa0554570:intron
CAGAGAGGGAATAGTCTTGA+GGG 0.472291 4_1:-51945771 None:intergenic
CCTTAGCAGCTGATGCTACC+CGG 0.472741 4_1:+51950482 Msa0554570:CDS
TCCTTTGCCTCTCAAGCGTA+AGG 0.476886 4_1:-51951368 None:intergenic
GTTGGTTTGCTGCTCTATGT+TGG 0.484746 4_1:+51951130 Msa0554570:CDS
TTACAGGATTTACTGGGAGC+AGG 0.487811 4_1:+51951688 Msa0554570:intron
CGGAAGAATTGCAGCAGAGA+GGG 0.489200 4_1:-51945785 None:intergenic
CCCTTACGCTTGAGAGGCAA+AGG 0.490580 4_1:+51951367 Msa0554570:CDS
AATTAAATTTGGTAGAGTGC+AGG 0.496012 4_1:+51950454 Msa0554570:intron
CCTTGTGATAAGTGCAGGAT+TGG 0.497659 4_1:+51950188 Msa0554570:CDS
GGGAGATTGGTATTTGGCAT+AGG 0.499768 4_1:+51948702 Msa0554570:CDS
ATATAACATTACAGATACAT+TGG 0.499894 4_1:-51951887 None:intergenic
CCGGGTAGCATCAGCTGCTA+AGG 0.501542 4_1:-51950482 None:intergenic
GTATGGACTAGGTAGCTTGT+TGG 0.505077 4_1:+51949861 Msa0554570:CDS
TCCACGAAACATTTCCCCTA+AGG 0.509338 4_1:-51950151 None:intergenic
GAGACTAGTTGTCCACGTAT+TGG 0.510388 4_1:-51949599 None:intergenic
GGGAAAAGGCAAATGTAACC+AGG 0.512818 4_1:-51951429 None:intergenic
CATCACTAAGTGGAATAACT+TGG 0.514103 4_1:+51948262 Msa0554570:CDS
GAAACTCCGCCAAGTAGTAA+AGG 0.514823 4_1:-51950865 None:intergenic
TGCAAACTGTGACAGATCAC+GGG 0.514877 4_1:+51950300 Msa0554570:intron
GTATGTGTGCAGGCCGGGTA+TGG 0.515824 4_1:+51949844 Msa0554570:intron
CTCCCTTTCACTTGTAACCT+CGG 0.517985 4_1:-51945725 None:intergenic
GTAATCTCATTATTCTTACT+GGG 0.518713 4_1:+51951064 Msa0554570:CDS
CACCAAGGAGAATAGAGACC+CGG 0.519401 4_1:-51950501 None:intergenic
GTGCAGGCCGGGTATGGACT+AGG 0.520250 4_1:+51949850 Msa0554570:intron
ACAATTTCGTTACCTTCAGT+GGG 0.521381 4_1:-51951450 None:intergenic
TACTATAAACACATTTATAG+AGG 0.522616 4_1:-51951841 None:intergenic
GAAATGTAGGACCTTGAAGC+TGG 0.527180 4_1:-51950056 None:intergenic
GAAGCAGAATCATGAAATGT+AGG 0.529348 4_1:-51950069 None:intergenic
ACCTTAGGGGAAATGTTTCG+TGG 0.531092 4_1:+51950150 Msa0554570:CDS
CCTGTGAGAAAGAGGAAAGT+GGG 0.532659 4_1:-51944822 None:intergenic
AAGGCCCTTGTGATAAGTGC+AGG 0.536243 4_1:+51950183 Msa0554570:CDS
CACCGAGGTTACAAGTGAAA+GGG 0.537213 4_1:+51945723 Msa0554570:CDS
TAATAATGGGATTTGGAATG+TGG 0.538557 4_1:+51949938 Msa0554570:CDS
AGTTGTCCACGTATTGGCGT+TGG 0.540531 4_1:-51949593 None:intergenic
CTACGCCGCATCAATCCTAC+AGG 0.541755 4_1:+51950341 Msa0554570:CDS
TTGCAGTCACCATCACTAAG+TGG 0.543117 4_1:+51948252 Msa0554570:intron
CCACCGAGGTTACAAGTGAA+AGG 0.547623 4_1:+51945722 Msa0554570:CDS
GAGGTGAACCTGTGAGAAAG+AGG 0.553528 4_1:-51944830 None:intergenic
GGTGGCTTCCAGCTTCTCCA+AGG 0.556238 4_1:+51949959 Msa0554570:CDS
GCTGTCTCTGCAATGTACAT+TGG 0.561804 4_1:-51949569 None:intergenic
CTTAGCAGCTGATGCTACCC+GGG 0.569831 4_1:+51950483 Msa0554570:CDS
TCTACTTTACAGGATTTACT+GGG 0.572981 4_1:+51951682 Msa0554570:intron
ATTTGGCATAGGAATTGGAC+TGG 0.574571 4_1:+51948713 Msa0554570:CDS
GTTGTCGTTGTTGACAGACT+TGG 0.575922 4_1:+51950835 Msa0554570:CDS
GGCTTCCAGCTTCTCCAAGG+TGG 0.576554 4_1:+51949962 Msa0554570:CDS
AACCAAGGGGCTTACACTAG+AGG 0.577868 4_1:+51951780 Msa0554570:CDS
ATAGTAGACCACCAAAAGCT+GGG 0.579819 4_1:-51946997 None:intergenic
CCAATCCTGCACTTATCACA+AGG 0.580382 4_1:-51950188 None:intergenic
GCAGAGAGGGAATAGTCTTG+AGG 0.588966 4_1:-51945772 None:intergenic
ACCTGTGAGAAAGAGGAAAG+TGG 0.589413 4_1:-51944823 None:intergenic
CAAGTTATTCCACTTAGTGA+TGG 0.590208 4_1:-51948261 None:intergenic
AAGCCAACCCATCGGACCAA+AGG 0.590961 4_1:-51951326 None:intergenic
AGGAGACCTTTACTACTTGG+CGG 0.596332 4_1:+51950859 Msa0554570:CDS
GCGGCGTAGTAGAGAACACT+TGG 0.601819 4_1:-51950327 None:intergenic
TGCCTTAATAGGCTCTGTGT+TGG 0.602581 4_1:+51948481 Msa0554570:CDS
CTTCATTGTACCAGAAACCA+AGG 0.608838 4_1:+51951765 Msa0554570:CDS
CCTTTGCCTCTCAAGCGTAA+GGG 0.610550 4_1:-51951367 None:intergenic
AAATGTTTCGTGGAAAATGT+CGG 0.619683 4_1:+51950160 Msa0554570:CDS
CAAGCTACCTAGTCCATACC+CGG 0.621967 4_1:-51949857 None:intergenic
AGGAGCGAATGCTGTTATGA+GGG 0.624609 4_1:-51948658 None:intergenic
GCACGTAAAAGTATCCACCT+TGG 0.625472 4_1:-51949976 None:intergenic
TGGTAGACACTGTTGCTGGA+TGG 0.626797 4_1:+51949881 Msa0554570:CDS
GTAGTTGATTATGACTGGAG+TGG 0.632194 4_1:+51950810 Msa0554570:intron
TAATGGGATTTGGAATGTGG+TGG 0.633278 4_1:+51949941 Msa0554570:CDS
TTCATTGTACCAGAAACCAA+GGG 0.637151 4_1:+51951766 Msa0554570:CDS
CCTTTCACTTGTAACCTCGG+TGG 0.640227 4_1:-51945722 None:intergenic
TCGTTGTTGACAGACTTGGA+AGG 0.641778 4_1:+51950839 Msa0554570:CDS
CTGTGAGAAAGAGGAAAGTG+GGG 0.641932 4_1:-51944821 None:intergenic
GTTTCGTGGAAAATGTCGGA+AGG 0.645463 4_1:+51950164 Msa0554570:CDS
ACAGCTCCAACGCCAATACG+TGG 0.658764 4_1:+51949587 Msa0554570:CDS
GGAAATTGTTGCACTAGATG+TGG 0.659777 4_1:-51947038 None:intergenic
ACGGAAGAATTGCAGCAGAG+AGG 0.661838 4_1:-51945786 None:intergenic
GCTATCATAAGCCAACCCAT+CGG 0.662767 4_1:-51951334 None:intergenic
ACCAAGGAGAATAGAGACCC+GGG 0.664447 4_1:-51950500 None:intergenic
CCATGAATTCCATTAAGCAG+AGG 0.665607 4_1:-51945748 None:intergenic
ACACATTTATAGAGGTAACA+AGG 0.672653 4_1:-51951833 None:intergenic
TAACACCTGTAGGATTGATG+CGG 0.685551 4_1:-51950346 None:intergenic
CAATTTCGTTACCTTCAGTG+GGG 0.693048 4_1:-51951449 None:intergenic
AGAAAATGATGTTACCTTAG+GGG 0.697514 4_1:+51950137 Msa0554570:CDS
TAGACACTGTTGCTGGATGG+CGG 0.699815 4_1:+51949884 Msa0554570:CDS
AATCTACCTTAAATACACCA+AGG 0.704025 4_1:-51950516 None:intergenic
GGAAAAGGCAAATGTAACCA+GGG 0.704101 4_1:-51951428 None:intergenic
TCATTGTACCAGAAACCAAG+GGG 0.704520 4_1:+51951767 Msa0554570:CDS
CAATCCTGCACTTATCACAA+GGG 0.713845 4_1:-51950187 None:intergenic
TGTGAGAAAGAGGAAAGTGG+GGG 0.728502 4_1:-51944820 None:intergenic
GCAAACTGTGACAGATCACG+GGG 0.731321 4_1:+51950301 Msa0554570:intron
GGAAGGAAAGTCATCCACCG+AGG 0.774777 4_1:+51945708 Msa0554570:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGATATTTTTATAAAAACTT+AGG + chr4_1:51949138-51949157 Msa0554570:intron 10.0%
!! TATTATTATCCAATTAAATT+TGG + chr4_1:51950443-51950462 Msa0554570:intron 10.0%
!!! TGATAGATTTTTAAAATATA+TGG - chr4_1:51951486-51951505 None:intergenic 10.0%
!! TGATATTTGATTGAAAATTA+TGG + chr4_1:51945393-51945412 Msa0554570:intron 15.0%
!!! TGTTTTAACAGAAATAAATA+TGG - chr4_1:51945874-51945893 None:intergenic 15.0%
!! AACAAAATATTATCATTTCA+TGG - chr4_1:51946233-51946252 None:intergenic 15.0%
!!! AGATTTTTTAAACATGTTTT+AGG - chr4_1:51946965-51946984 None:intergenic 15.0%
!! TCATATTATATTGAAGTATA+TGG - chr4_1:51947256-51947275 None:intergenic 15.0%
!! GTAAGTTTAAATTAAATTCT+TGG + chr4_1:51948318-51948337 Msa0554570:intron 15.0%
!!! AATAGTTTCAACAATTTTTT+TGG + chr4_1:51949422-51949441 Msa0554570:intron 15.0%
!!! TGTTATGTTAATTTTAATCA+AGG + chr4_1:51950364-51950383 Msa0554570:intron 15.0%
!! AACTTAGATAATTATATAAG+AGG + chr4_1:51950966-51950985 Msa0554570:intron 15.0%
!! TGAAAAATAAAATCACTAAA+TGG - chr4_1:51951301-51951320 None:intergenic 15.0%
!! CATTAAGTAATAATGAATTT+AGG + chr4_1:51951932-51951951 Msa0554570:three_prime_UTR 15.0%
!! GATATATAAAACTCAAATTG+AGG - chr4_1:51944894-51944913 None:intergenic 20.0%
!! AGAAAGAAAAAAAACTGTAT+TGG + chr4_1:51944955-51944974 Msa0554570:intron 20.0%
!! GAAAGAAAAAAAACTGTATT+GGG + chr4_1:51944956-51944975 Msa0554570:intron 20.0%
!! TGAAATTATGAAAGCTTAAA+AGG + chr4_1:51944994-51945013 Msa0554570:intron 20.0%
!! GAAATTATGAAAGCTTAAAA+GGG + chr4_1:51944995-51945014 Msa0554570:intron 20.0%
!! AAATTATGAAAGCTTAAAAG+GGG + chr4_1:51944996-51945015 Msa0554570:intron 20.0%
!! CTCTAATTTCATTGATAAAT+AGG - chr4_1:51945204-51945223 None:intergenic 20.0%
!!! ATTTCTCTTATAGTTTTTAC+AGG - chr4_1:51945330-51945349 None:intergenic 20.0%
!! AAAACTATAAATTAATGAGC+TGG + chr4_1:51945361-51945380 Msa0554570:intron 20.0%
!!! ACTAATTTGTTGTTATCTTT+TGG + chr4_1:51945640-51945659 Msa0554570:intron 20.0%
!! ACTAAATATCTTCAAAATGA+TGG - chr4_1:51946331-51946350 None:intergenic 20.0%
!!! ATTTTCTTTTTAAAGAAGTG+AGG - chr4_1:51946877-51946896 None:intergenic 20.0%
!! AAGACGATGAAATATAAAAT+AGG + chr4_1:51946920-51946939 Msa0554570:intron 20.0%
!! ATTAATACAAGTAATGATCA+TGG - chr4_1:51947279-51947298 None:intergenic 20.0%
!! AAATCATTCATAACAAAAAC+TGG - chr4_1:51947516-51947535 None:intergenic 20.0%
!!! TTTTGTTATGAATGATTTGT+TGG + chr4_1:51947518-51947537 Msa0554570:intron 20.0%
!!! TTTGTTATGAATGATTTGTT+GGG + chr4_1:51947519-51947538 Msa0554570:intron 20.0%
!! TTTGAGAAATAAATAAGTTC+TGG - chr4_1:51947853-51947872 None:intergenic 20.0%
!! TATACAACAAAATGTACATA+GGG - chr4_1:51947884-51947903 None:intergenic 20.0%
!! ATATACAACAAAATGTACAT+AGG - chr4_1:51947885-51947904 None:intergenic 20.0%
!!! ATTTTACTTCAATAAACACA+AGG - chr4_1:51948063-51948082 None:intergenic 20.0%
!! TAGTATAATACATAGAAATG+TGG + chr4_1:51948103-51948122 Msa0554570:intron 20.0%
!!! TTATTTTGTTGTATGTTTAG+TGG + chr4_1:51948200-51948219 Msa0554570:intron 20.0%
!!! ACATGACAAATTGTATTTTA+AGG + chr4_1:51948588-51948607 Msa0554570:intron 20.0%
!!! CATGACAAATTGTATTTTAA+GGG + chr4_1:51948589-51948608 Msa0554570:intron 20.0%
!! CAAACCATGAAATTATTATA+TGG + chr4_1:51948782-51948801 Msa0554570:intron 20.0%
!! GTTTCCATATAATAATTTCA+TGG - chr4_1:51948789-51948808 None:intergenic 20.0%
!! AAGAAAAATAAGACAGAAAA+AGG + chr4_1:51949276-51949295 Msa0554570:intron 20.0%
!! AAAGAGTTCTTTATAGTAAT+CGG + chr4_1:51949626-51949645 Msa0554570:CDS 20.0%
!! TATTAAATATACTGAAGTGT+TGG - chr4_1:51950272-51950291 None:intergenic 20.0%
!! AAAATTAGATTTCACTATGA+AGG + chr4_1:51950658-51950677 Msa0554570:intron 20.0%
!!! TATAATTATCTAAGTTGAAG+CGG - chr4_1:51950962-51950981 None:intergenic 20.0%
!! AATATAAATCATGACATGAA+TGG - chr4_1:51951199-51951218 None:intergenic 20.0%
!!! TTTATTTTTCAGATTTCCTT+TGG + chr4_1:51951310-51951329 Msa0554570:intron 20.0%
!! TCTTACAACATCAAATATAT+TGG + chr4_1:51951539-51951558 Msa0554570:intron 20.0%
!! CAATATTTGTTCATTTGAAT+TGG + chr4_1:51951562-51951581 Msa0554570:intron 20.0%
!! TACTATAAACACATTTATAG+AGG - chr4_1:51951844-51951863 None:intergenic 20.0%
!! ATATAACATTACAGATACAT+TGG - chr4_1:51951890-51951909 None:intergenic 20.0%
!!! AGAAAAATTGTTTCTCATAT+AGG - chr4_1:51952006-51952025 None:intergenic 20.0%
! TTTGAATTATGTTATTCCAG+TGG - chr4_1:51945171-51945190 None:intergenic 25.0%
!! TGTATTTTGTGTCTATATGT+CGG + chr4_1:51945465-51945484 Msa0554570:intron 25.0%
! GTGCTTCATATTTATTTGTT+TGG + chr4_1:51945501-51945520 Msa0554570:intron 25.0%
!!! GAAATGCATTGATTTTCATT+AGG + chr4_1:51945687-51945706 Msa0554570:intron 25.0%
! AAGAATAAACTTACTAGCTA+TGG + chr4_1:51945922-51945941 Msa0554570:intron 25.0%
!! TTATGTTGATCATGTTTTCT+GGG + chr4_1:51946006-51946025 Msa0554570:intron 25.0%
!! TGACTAGTTAAATATTTCCA+CGG - chr4_1:51946170-51946189 None:intergenic 25.0%
!! TGTTCTTCTAAAAACTAATG+CGG + chr4_1:51946249-51946268 Msa0554570:intron 25.0%
!! TTGAAGATATTTAGTTCCAA+TGG + chr4_1:51946336-51946355 Msa0554570:intron 25.0%
! AAGGAAAAAAAACGATTGAA+AGG - chr4_1:51946373-51946392 None:intergenic 25.0%
!! ATAAGATATTAAGTTGCAAC+AGG - chr4_1:51946448-51946467 None:intergenic 25.0%
! TTAATCAACATACAGTTGTT+GGG - chr4_1:51946691-51946710 None:intergenic 25.0%
! TTTAATCAACATACAGTTGT+TGG - chr4_1:51946692-51946711 None:intergenic 25.0%
! AAAGGAAGAAATCTAAAAGA+AGG - chr4_1:51946735-51946754 None:intergenic 25.0%
! CTACTATTTGGATATGATAT+TGG + chr4_1:51947013-51947032 Msa0554570:CDS 25.0%
! ACCAAATGAAAATATTGAAG+CGG - chr4_1:51947097-51947116 None:intergenic 25.0%
!!! AAAGTTCTGGAAATTATTAC+AGG - chr4_1:51947129-51947148 None:intergenic 25.0%
!!! TTTTCCATGCTTTATTTGTA+AGG + chr4_1:51947226-51947245 Msa0554570:intron 25.0%
!! ATCTCTTTGTTGAGTTTTTA+CGG + chr4_1:51947375-51947394 Msa0554570:intron 25.0%
! AAGCTCATATACTATTTGTT+GGG - chr4_1:51947673-51947692 None:intergenic 25.0%
! AAAGGTTAACTCTTTAATTC+TGG - chr4_1:51947807-51947826 None:intergenic 25.0%
! TAAGAAATCAGCAATATTGA+AGG - chr4_1:51948507-51948526 None:intergenic 25.0%
!!! TTCAATATTGCTGATTTCTT+AGG + chr4_1:51948506-51948525 Msa0554570:CDS 25.0%
! ATCACCAATAAAGGAAAATT+AGG - chr4_1:51948681-51948700 None:intergenic 25.0%
!!! AATTTTCCTTTATTGGTGAT+TGG + chr4_1:51948681-51948700 Msa0554570:CDS 25.0%
!!! ATTTTCCTTTATTGGTGATT+GGG + chr4_1:51948682-51948701 Msa0554570:CDS 25.0%
! AAACGTTTCTTCTTAATTGT+TGG - chr4_1:51948896-51948915 None:intergenic 25.0%
! ATGTGTAAGTACAAATACAA+AGG - chr4_1:51948975-51948994 None:intergenic 25.0%
!!! TCTCAACTGATTTTTATCAA+CGG + chr4_1:51948995-51949014 Msa0554570:intron 25.0%
! AAATATATATTGTACGTACC+CGG - chr4_1:51949091-51949110 None:intergenic 25.0%
!!! TGTTTTTGAAGAAGCAAAAT+AGG + chr4_1:51949112-51949131 Msa0554570:intron 25.0%
!!! GTTTTTGAAGAAGCAAAATA+GGG + chr4_1:51949113-51949132 Msa0554570:intron 25.0%
! AAAAAGGATATAAACGTAAC+AGG + chr4_1:51949292-51949311 Msa0554570:intron 25.0%
! TAAATCTTAGAGTTGACATA+AGG - chr4_1:51949353-51949372 None:intergenic 25.0%
! AAGAAAATGATGTTACCTTA+GGG + chr4_1:51950136-51950155 Msa0554570:CDS 25.0%
! AAAATTAACATAACACCTGT+AGG - chr4_1:51950359-51950378 None:intergenic 25.0%
! TTATCAATTACATATCACCA+TGG + chr4_1:51950407-51950426 Msa0554570:intron 25.0%
!! AATAGTGTTATTACATTCCA+TGG - chr4_1:51950427-51950446 None:intergenic 25.0%
! ACTAAAAATGTTTCTTTCTC+AGG - chr4_1:51950927-51950946 None:intergenic 25.0%
! GTTCAAATTATAAGAACATG+TGG + chr4_1:51951026-51951045 Msa0554570:intron 25.0%
! GTAATCTCATTATTCTTACT+GGG + chr4_1:51951064-51951083 Msa0554570:CDS 25.0%
! GAAAATGAAATTCCTTATCT+AGG - chr4_1:51951241-51951260 None:intergenic 25.0%
! GTAGGAATTATGATAAAAAG+TGG - chr4_1:51951265-51951284 None:intergenic 25.0%
! AACAATTTCAATGAAGTCAA+CGG - chr4_1:51951638-51951657 None:intergenic 25.0%
!!! TTTTTGTTGTCTGTTTACTA+CGG + chr4_1:51951963-51951982 Msa0554570:three_prime_UTR 25.0%
TTCGAACTTCAAAGCAAAAA+TGG + chr4_1:51944780-51944799 Msa0554570:exon 30.0%
TTGTAGAACAAAGAATGAAG+AGG - chr4_1:51944852-51944871 None:intergenic 30.0%
AGAAAAAAAACTGTATTGGG+AGG + chr4_1:51944959-51944978 Msa0554570:intron 30.0%
GAAAAAAAACTGTATTGGGA+GGG + chr4_1:51944960-51944979 Msa0554570:intron 30.0%
! GTTGGAATTTTGCTTGAAAA+CGG + chr4_1:51945018-51945037 Msa0554570:intron 30.0%
! ATTTTGCTTGAAAACGGTAA+TGG + chr4_1:51945024-51945043 Msa0554570:intron 30.0%
! TTTTGCTTGAAAACGGTAAT+GGG + chr4_1:51945025-51945044 Msa0554570:intron 30.0%
! AGATCTTTAATCAGAAGTGT+TGG - chr4_1:51945249-51945268 None:intergenic 30.0%
!!! TGCATTGATTTTCATTAGGA+AGG + chr4_1:51945691-51945710 Msa0554570:intron 30.0%
TCAAAAGGTAATAACACTCA+CGG - chr4_1:51945808-51945827 None:intergenic 30.0%
AACGAGTAAAAAAGTAACAC+AGG - chr4_1:51945833-51945852 None:intergenic 30.0%
! GTTATGTTGATCATGTTTTC+TGG + chr4_1:51946005-51946024 Msa0554570:intron 30.0%
TAGACTAAGATAACCATGTT+TGG + chr4_1:51946192-51946211 Msa0554570:intron 30.0%
ATCAAGTAACAAACCAAACA+TGG - chr4_1:51946208-51946227 None:intergenic 30.0%
! TTTTCCTTCAAGAAATCACT+TGG + chr4_1:51946385-51946404 Msa0554570:intron 30.0%
! ATGATAAAAGTAGCTTGTGT+CGG + chr4_1:51946472-51946491 Msa0554570:intron 30.0%
TATCTTACCACAAAACCTTA+AGG - chr4_1:51946600-51946619 None:intergenic 30.0%
!! TAAGGTTTTGTGGTAAGATA+TGG + chr4_1:51946600-51946619 Msa0554570:intron 30.0%
ACAACCAAACTGAAGAAAAT+TGG + chr4_1:51946786-51946805 Msa0554570:intron 30.0%
! TATTTCATCGTCTTTTCACT+AGG - chr4_1:51946914-51946933 None:intergenic 30.0%
GTATCAAAAGTAGAGTAGAA+TGG - chr4_1:51947075-51947094 None:intergenic 30.0%
! ACCGCTTCAATATTTTCATT+TGG + chr4_1:51947093-51947112 Msa0554570:intron 30.0%
! GCTTCAATATTTTCATTTGG+TGG + chr4_1:51947096-51947115 Msa0554570:intron 30.0%
ATACTATGAGATCATACTTC+TGG - chr4_1:51947200-51947219 None:intergenic 30.0%
AACACCTTACAAATAAAGCA+TGG - chr4_1:51947233-51947252 None:intergenic 30.0%
TAAGACTGAAATTACGTTAC+CGG - chr4_1:51947344-51947363 None:intergenic 30.0%
! AGTTTTTACGGTGTCTATAT+TGG + chr4_1:51947387-51947406 Msa0554570:intron 30.0%
AATGAGAAAATACAGGATAC+TGG - chr4_1:51947577-51947596 None:intergenic 30.0%
!! CATTTTAGTCAACACAGAAA+TGG + chr4_1:51947629-51947648 Msa0554570:intron 30.0%
CAAGCTCATATACTATTTGT+TGG - chr4_1:51947674-51947693 None:intergenic 30.0%
CAACAAATAGTATATGAGCT+TGG + chr4_1:51947672-51947691 Msa0554570:intron 30.0%
! TAAATAAGTTCTGGCGTAAA+GGG - chr4_1:51947844-51947863 None:intergenic 30.0%
! ATAAATAAGTTCTGGCGTAA+AGG - chr4_1:51947845-51947864 None:intergenic 30.0%
! AAATGTGGATTTTTATGCTG+AGG + chr4_1:51948118-51948137 Msa0554570:intron 30.0%
!! TTCTTGGTTTGTTCTTTACT+TGG + chr4_1:51948334-51948353 Msa0554570:intron 30.0%
TCATTATATGGTGCCTTAAT+AGG + chr4_1:51948470-51948489 Msa0554570:CDS 30.0%
!! ACTCTTAGTCTTATTGGAAT+AGG + chr4_1:51948756-51948775 Msa0554570:intron 30.0%
ACGTAGATATAAAGTTTCAG+TGG - chr4_1:51949041-51949060 None:intergenic 30.0%
AACTTTATATCTACGTTGCA+TGG + chr4_1:51949045-51949064 Msa0554570:intron 30.0%
!!! TCCTACGTCTATTTTGATTT+GGG - chr4_1:51949249-51949268 None:intergenic 30.0%
!!! TTCCTACGTCTATTTTGATT+TGG - chr4_1:51949250-51949269 None:intergenic 30.0%
ATTCTCGATTGCAACATTAA+CGG - chr4_1:51949405-51949424 None:intergenic 30.0%
TCTGCATGTATATGTATTGT+TGG + chr4_1:51949458-51949477 Msa0554570:intron 30.0%
AGAACAGACATGAAAATTCA+AGG - chr4_1:51949686-51949705 None:intergenic 30.0%
ATTGAAGAAGCTTTACATGA+AGG - chr4_1:51949753-51949772 None:intergenic 30.0%
! TAATAATGGGATTTGGAATG+TGG + chr4_1:51949938-51949957 Msa0554570:CDS 30.0%
TTTACGTGCTATACAGAAAA+AGG + chr4_1:51949990-51950009 Msa0554570:CDS 30.0%
TTACGTGCTATACAGAAAAA+GGG + chr4_1:51949991-51950010 Msa0554570:CDS 30.0%
!! ATGGCAGAGTTTTCTTATTT+AGG + chr4_1:51950111-51950130 Msa0554570:CDS 30.0%
GAAGAAAATGATGTTACCTT+AGG + chr4_1:51950135-51950154 Msa0554570:CDS 30.0%
AGAAAATGATGTTACCTTAG+GGG + chr4_1:51950137-51950156 Msa0554570:CDS 30.0%
AAATGTTTCGTGGAAAATGT+CGG + chr4_1:51950160-51950179 Msa0554570:CDS 30.0%
TGCACTCTACCAAATTTAAT+TGG - chr4_1:51950455-51950474 None:intergenic 30.0%
AATTAAATTTGGTAGAGTGC+AGG + chr4_1:51950454-51950473 Msa0554570:intron 30.0%
! TATTCTCCTTGGTGTATTTA+AGG + chr4_1:51950510-51950529 Msa0554570:CDS 30.0%
AATCTACCTTAAATACACCA+AGG - chr4_1:51950519-51950538 None:intergenic 30.0%
TTAACATCACATGTATGTCA+AGG + chr4_1:51950620-51950639 Msa0554570:intron 30.0%
GGCAAGCTAAATTTATAACT+TGG - chr4_1:51950710-51950729 None:intergenic 30.0%
AACTTACTGCGTTATTAACA+AGG - chr4_1:51950731-51950750 None:intergenic 30.0%
ATATGATCACATCATGTAGA+TGG - chr4_1:51950764-51950783 None:intergenic 30.0%
TCAACTACAACAAAAACAGA+AGG - chr4_1:51950798-51950817 None:intergenic 30.0%
TTGTTGTAGTTGATTATGAC+TGG + chr4_1:51950805-51950824 Msa0554570:intron 30.0%
GAAATAGAAAGGAGATAGAA+AGG - chr4_1:51950905-51950924 None:intergenic 30.0%
TTCTTTCTCAGGAAATAGAA+AGG - chr4_1:51950916-51950935 None:intergenic 30.0%
GGTAATCTCATTATTCTTAC+TGG + chr4_1:51951063-51951082 Msa0554570:intron 30.0%
!!! ATGTTGTTTTCACCTAGATA+AGG + chr4_1:51951226-51951245 Msa0554570:intron 30.0%
AAGGTAACGAAATTGTGAAA+AGG + chr4_1:51951457-51951476 Msa0554570:intron 30.0%
AGTAAATCCTGTAAAGTAGA+GGG - chr4_1:51951682-51951701 None:intergenic 30.0%
TCTACTTTACAGGATTTACT+GGG + chr4_1:51951682-51951701 Msa0554570:intron 30.0%
ACACATTTATAGAGGTAACA+AGG - chr4_1:51951836-51951855 None:intergenic 30.0%
!! TTTTGTTGTCTGTTTACTAC+GGG + chr4_1:51951964-51951983 Msa0554570:three_prime_UTR 30.0%
TATGAAAGCTTAAAAGGGGT+TGG + chr4_1:51945000-51945019 Msa0554570:intron 35.0%
TTACTAAACCCCAAATGAAG+CGG - chr4_1:51945109-51945128 None:intergenic 35.0%
! TCATTTGGGGTTTAGTAACT+TGG + chr4_1:51945111-51945130 Msa0554570:intron 35.0%
TGGACACTCTCAACATAAAA+TGG - chr4_1:51945151-51945170 None:intergenic 35.0%
! GTTTTGTGCTTTGCTCTTTT+GGG + chr4_1:51945523-51945542 Msa0554570:intron 35.0%
! TTTTGTGCTTTGCTCTTTTG+GGG + chr4_1:51945524-51945543 Msa0554570:intron 35.0%
AAAGTAACACAGGAGTCAAA+AGG - chr4_1:51945823-51945842 None:intergenic 35.0%
AAACTTACTAGCTATGGTAG+AGG + chr4_1:51945928-51945947 Msa0554570:intron 35.0%
AGGACTATAACTTCTGTTAG+TGG + chr4_1:51945948-51945967 Msa0554570:intron 35.0%
! AGGACTTTAATTTCTCAGTG+TGG + chr4_1:51945981-51946000 Msa0554570:intron 35.0%
! TCTTCTAAAAACTAATGCGG+CGG + chr4_1:51946252-51946271 Msa0554570:intron 35.0%
AAAGGAACATTGAACTCCAT+TGG - chr4_1:51946355-51946374 None:intergenic 35.0%
! TCCATTTTACCAAGCAATGT+GGG - chr4_1:51946536-51946555 None:intergenic 35.0%
! TTGAGGACTTGATAACTAAG+AGG + chr4_1:51946558-51946577 Msa0554570:intron 35.0%
! CCACAAAACCTTAAGGTATT+CGG - chr4_1:51946593-51946612 None:intergenic 35.0%
CAATGTCAAGCAGAAAGAAA+AGG - chr4_1:51946753-51946772 None:intergenic 35.0%
! GATGCCAATTTTCTTCAGTT+TGG - chr4_1:51946793-51946812 None:intergenic 35.0%
TGCTATCAGAAAATCAAGGA+TGG - chr4_1:51946832-51946851 None:intergenic 35.0%
!! GACTTGCTATCAGAAAATCA+AGG - chr4_1:51946836-51946855 None:intergenic 35.0%
TAGTGCAACAATTTCCATTC+AGG + chr4_1:51947045-51947064 Msa0554570:CDS 35.0%
AGTAGAATGGTTTACCTGAA+TGG - chr4_1:51947062-51947081 None:intergenic 35.0%
!! AATCGGAATCTCTAAAGTTC+TGG - chr4_1:51947142-51947161 None:intergenic 35.0%
CAACAGTACAGCAGAAAAAT+CGG - chr4_1:51947159-51947178 None:intergenic 35.0%
AAGACTGAAATTACGTTACC+GGG - chr4_1:51947343-51947362 None:intergenic 35.0%
ATCTACCCACAACTTCTAAT+GGG - chr4_1:51947428-51947447 None:intergenic 35.0%
TATCTACCCACAACTTCTAA+TGG - chr4_1:51947429-51947448 None:intergenic 35.0%
!! TGTTGTACTGCTTTTACACT+TGG - chr4_1:51947453-51947472 None:intergenic 35.0%
AAGTGTAAAAGCAGTACAAC+AGG + chr4_1:51947452-51947471 Msa0554570:intron 35.0%
! TGGAACATATGATGGAGAAA+AGG + chr4_1:51947481-51947500 Msa0554570:intron 35.0%
! GGAACATATGATGGAGAAAA+GGG + chr4_1:51947482-51947501 Msa0554570:intron 35.0%
GATGGCAAATGAGAAAATAC+AGG - chr4_1:51947584-51947603 None:intergenic 35.0%
TCTCATTTGCCATCTCTTAT+TGG + chr4_1:51947590-51947609 Msa0554570:intron 35.0%
AGAATGACACCAATAAGAGA+TGG - chr4_1:51947602-51947621 None:intergenic 35.0%
ACAGAAATGGACATTTGTTC+TGG + chr4_1:51947642-51947661 Msa0554570:intron 35.0%
ACTTATTGCTATGGTTCCTT+AGG - chr4_1:51947698-51947717 None:intergenic 35.0%
AGTTCCATCACTTATTGCTA+TGG - chr4_1:51947707-51947726 None:intergenic 35.0%
! TAGCAATAAGTGATGGAACT+TGG + chr4_1:51947707-51947726 Msa0554570:intron 35.0%
! TAAGTGATGGAACTTGGAAA+TGG + chr4_1:51947713-51947732 Msa0554570:intron 35.0%
! AAGAGTTAACCTTTTCTCGA+AGG + chr4_1:51947813-51947832 Msa0554570:intron 35.0%
TCGTGGATGAAATAATGAGA+GGG - chr4_1:51947987-51948006 None:intergenic 35.0%
! TTTTCATTGCGTGATAGAAC+TGG + chr4_1:51948027-51948046 Msa0554570:intron 35.0%
TCAGTCAAAGTGACACAAAA+AGG - chr4_1:51948144-51948163 None:intergenic 35.0%
CAAGTTATTCCACTTAGTGA+TGG - chr4_1:51948264-51948283 None:intergenic 35.0%
CATCACTAAGTGGAATAACT+TGG + chr4_1:51948262-51948281 Msa0554570:CDS 35.0%
TTAGATATAGTATCCTTCCC+AGG + chr4_1:51948557-51948576 Msa0554570:intron 35.0%
! CGCTCCTAATTTTCCTTTAT+TGG + chr4_1:51948674-51948693 Msa0554570:CDS 35.0%
AATCTCCCAATCACCAATAA+AGG - chr4_1:51948690-51948709 None:intergenic 35.0%
! TTTATTGGTGATTGGGAGAT+TGG + chr4_1:51948689-51948708 Msa0554570:CDS 35.0%
TTGGTATTTGGCATAGGAAT+TGG + chr4_1:51948708-51948727 Msa0554570:CDS 35.0%
!!! TGGTATGCTCTTTTTTATGC+TGG + chr4_1:51948733-51948752 Msa0554570:intron 35.0%
TATTATATGGAAACTGCTGC+TGG + chr4_1:51948795-51948814 Msa0554570:intron 35.0%
ATTATATGGAAACTGCTGCT+GGG + chr4_1:51948796-51948815 Msa0554570:intron 35.0%
ATATCTACGTTGCATGGATA+CGG + chr4_1:51949051-51949070 Msa0554570:intron 35.0%
!!! CCTACGTCTATTTTGATTTG+GGG - chr4_1:51949248-51949267 None:intergenic 35.0%
! GTGTTCATTCCATCTCTTTT+AGG + chr4_1:51949532-51949551 Msa0554570:intron 35.0%
! TGTAAGTTCTCGAACTTTTC+TGG + chr4_1:51949655-51949674 Msa0554570:intron 35.0%
!! CTTCCAGGTGTTACTAAAAA+TGG + chr4_1:51949810-51949829 Msa0554570:intron 35.0%
TAGTCCTGTTGCAGTAATAA+TGG + chr4_1:51949924-51949943 Msa0554570:CDS 35.0%
AGTCCTGTTGCAGTAATAAT+GGG + chr4_1:51949925-51949944 Msa0554570:CDS 35.0%
AATCCCATTATTACTGCAAC+AGG - chr4_1:51949931-51949950 None:intergenic 35.0%
! GTTGCAGTAATAATGGGATT+TGG + chr4_1:51949931-51949950 Msa0554570:CDS 35.0%
TACGTGCTATACAGAAAAAG+GGG + chr4_1:51949992-51950011 Msa0554570:CDS 35.0%
GAAGCAGAATCATGAAATGT+AGG - chr4_1:51950072-51950091 None:intergenic 35.0%
TCAGCAAGTAGATGAGATTA+TGG + chr4_1:51950092-51950111 Msa0554570:CDS 35.0%
TCACTATGAAGGAATTCTTC+AGG + chr4_1:51950669-51950688 Msa0554570:intron 35.0%
CACTATGAAGGAATTCTTCA+GGG + chr4_1:51950670-51950689 Msa0554570:intron 35.0%
ACTATGAAGGAATTCTTCAG+GGG + chr4_1:51950671-51950690 Msa0554570:intron 35.0%
ATTTGAACTTCATCGACAAC+TGG - chr4_1:51951014-51951033 None:intergenic 35.0%
AGAACATGTGGTTATTTGTG+TGG + chr4_1:51951038-51951057 Msa0554570:intron 35.0%
GGGTTCGTATTACATATTCT+TGG + chr4_1:51951084-51951103 Msa0554570:CDS 35.0%
ATCACTAAATGGTGTAAGCA+TGG - chr4_1:51951290-51951309 None:intergenic 35.0%
ACAATTTCGTTACCTTCAGT+GGG - chr4_1:51951453-51951472 None:intergenic 35.0%
!!! GTTTTTTCCCTCTACTTTAC+AGG + chr4_1:51951672-51951691 Msa0554570:intron 35.0%
CAGTAAATCCTGTAAAGTAG+AGG - chr4_1:51951683-51951702 None:intergenic 35.0%
CTCTACTTTACAGGATTTAC+TGG + chr4_1:51951681-51951700 Msa0554570:intron 35.0%
! CATATTTTCTGCAATAGCTG+TGG + chr4_1:51951723-51951742 Msa0554570:CDS 35.0%
TTCATTGTACCAGAAACCAA+GGG + chr4_1:51951766-51951785 Msa0554570:CDS 35.0%
AGCACTTGCACTCTTTGAAT+TGG + chr4_1:51944918-51944937 Msa0554570:intron 40.0%
CTTGCACTCTTTGAATTGGT+TGG + chr4_1:51944922-51944941 Msa0554570:intron 40.0%
AAAACTGTATTGGGAGGGAA+TGG + chr4_1:51944965-51944984 Msa0554570:intron 40.0%
ACTAGTTGAACCGCTTCATT+TGG + chr4_1:51945096-51945115 Msa0554570:intron 40.0%
CTAGTTGAACCGCTTCATTT+GGG + chr4_1:51945097-51945116 Msa0554570:intron 40.0%
TAGTTGAACCGCTTCATTTG+GGG + chr4_1:51945098-51945117 Msa0554570:intron 40.0%
!! TTTATGTTGAGAGTGTCCAC+TGG + chr4_1:51945152-51945171 Msa0554570:intron 40.0%
GTAACTACATGTCTCAGTGT+CGG - chr4_1:51945281-51945300 None:intergenic 40.0%
ACTAAGTGAGATCAGCTACA+AGG - chr4_1:51945430-51945449 None:intergenic 40.0%
!! GGTTTTGTGCTTTGCTCTTT+TGG + chr4_1:51945522-51945541 Msa0554570:intron 40.0%
CCATGAATTCCATTAAGCAG+AGG - chr4_1:51945751-51945770 None:intergenic 40.0%
CCTCTGCTTAATGGAATTCA+TGG + chr4_1:51945748-51945767 Msa0554570:CDS 40.0%
GAAATTAAAGTCCTCAGCAC+AGG - chr4_1:51945975-51945994 None:intergenic 40.0%
! TGTTGATCATGTTTTCTGGG+TGG + chr4_1:51946009-51946028 Msa0554570:intron 40.0%
TGATGTGCTTTGCTTTGTCA+TGG + chr4_1:51946066-51946085 Msa0554570:intron 40.0%
GATGTGCTTTGCTTTGTCAT+GGG + chr4_1:51946067-51946086 Msa0554570:intron 40.0%
ATGTGCTTTGCTTTGTCATG+GGG + chr4_1:51946068-51946087 Msa0554570:intron 40.0%
CATCACCTATTCATGTCTCT+TGG + chr4_1:51946117-51946136 Msa0554570:intron 40.0%
AGAGACCAAGAGACATGAAT+AGG - chr4_1:51946125-51946144 None:intergenic 40.0%
GGAATGAAATGCTCACTGAT+AGG - chr4_1:51946310-51946329 None:intergenic 40.0%
TAAAAGCTGAAGGTGGCATA+TGG - chr4_1:51946420-51946439 None:intergenic 40.0%
ACAGGATAGCTAAAAGCTGA+AGG - chr4_1:51946430-51946449 None:intergenic 40.0%
GTTAAAAGTCCCACATTGCT+TGG + chr4_1:51946524-51946543 Msa0554570:intron 40.0%
TCCCACATTGCTTGGTAAAA+TGG + chr4_1:51946532-51946551 Msa0554570:intron 40.0%
! CTCCATTTTACCAAGCAATG+TGG - chr4_1:51946537-51946556 None:intergenic 40.0%
CACATTGCTTGGTAAAATGG+AGG + chr4_1:51946535-51946554 Msa0554570:intron 40.0%
! CCTTAAGGTATTCGGTTCAT+GGG - chr4_1:51946585-51946604 None:intergenic 40.0%
! ACCTTAAGGTATTCGGTTCA+TGG - chr4_1:51946586-51946605 None:intergenic 40.0%
! CCGAATACCTTAAGGTTTTG+TGG + chr4_1:51946590-51946609 Msa0554570:intron 40.0%
ACATACAGTTGTTGGGTCAT+GGG - chr4_1:51946684-51946703 None:intergenic 40.0%
AACATACAGTTGTTGGGTCA+TGG - chr4_1:51946685-51946704 None:intergenic 40.0%
! AGATTTCTCTTCCCAGCTTT+TGG + chr4_1:51946986-51947005 Msa0554570:intron 40.0%
ATAGTAGACCACCAAAAGCT+GGG - chr4_1:51947000-51947019 None:intergenic 40.0%
AATAGTAGACCACCAAAAGC+TGG - chr4_1:51947001-51947020 None:intergenic 40.0%
!! GCTTTTGGTGGTCTACTATT+TGG + chr4_1:51947001-51947020 Msa0554570:CDS 40.0%
GGAAATTGTTGCACTAGATG+TGG - chr4_1:51947041-51947060 None:intergenic 40.0%
! TTTTCCCCCATTAGAAGTTG+TGG + chr4_1:51947419-51947438 Msa0554570:intron 40.0%
TTTCCCCCATTAGAAGTTGT+GGG + chr4_1:51947420-51947439 Msa0554570:intron 40.0%
TCTACCCACAACTTCTAATG+GGG - chr4_1:51947427-51947446 None:intergenic 40.0%
GGTCATCTTGGAACATATGA+TGG + chr4_1:51947473-51947492 Msa0554570:intron 40.0%
TAGTATATGAGCTTGGCCTA+AGG + chr4_1:51947679-51947698 Msa0554570:intron 40.0%
GGAACCATAGCAATAAGTGA+TGG + chr4_1:51947700-51947719 Msa0554570:intron 40.0%
AGGGAAAAACCTTCGAGAAA+AGG - chr4_1:51947825-51947844 None:intergenic 40.0%
!! GAGGGATTAGTTAGGAGAAA+AGG - chr4_1:51947908-51947927 None:intergenic 40.0%
AGACAACAAGAAGTTAGGAG+GGG - chr4_1:51947935-51947954 None:intergenic 40.0%
GAGACAACAAGAAGTTAGGA+GGG - chr4_1:51947936-51947955 None:intergenic 40.0%
CTACGAGACAACAAGAAGTT+AGG - chr4_1:51947940-51947959 None:intergenic 40.0%
ATGAGAGGGAGAAGAGAATA+TGG - chr4_1:51947973-51947992 None:intergenic 40.0%
GTCGTGGATGAAATAATGAG+AGG - chr4_1:51947988-51948007 None:intergenic 40.0%
CTACACTGTTAGTAAAGTCG+TGG - chr4_1:51948004-51948023 None:intergenic 40.0%
! GTGATGGTGACTGCAAATAA+GGG - chr4_1:51948248-51948267 None:intergenic 40.0%
! AGTGATGGTGACTGCAAATA+AGG - chr4_1:51948249-51948268 None:intergenic 40.0%
GACTTAGACGCTGTTGAAAT+TGG + chr4_1:51948288-51948307 Msa0554570:CDS 40.0%
! TGATGTCTTTTGCAGACTAG+CGG + chr4_1:51948446-51948465 Msa0554570:intron 40.0%
! CAGACTAGCGGATCATTATA+TGG + chr4_1:51948458-51948477 Msa0554570:intron 40.0%
! GCTGCATTGATGTATCTTGT+TGG + chr4_1:51948633-51948652 Msa0554570:CDS 40.0%
GTGATTGGGAGATTGGTATT+TGG + chr4_1:51948696-51948715 Msa0554570:CDS 40.0%
ATTTGGCATAGGAATTGGAC+TGG + chr4_1:51948713-51948732 Msa0554570:CDS 40.0%
!! TGCTGGACTCTTAGTCTTAT+TGG + chr4_1:51948750-51948769 Msa0554570:intron 40.0%
TATCTACGTTGCATGGATAC+GGG + chr4_1:51949052-51949071 Msa0554570:intron 40.0%
CCCCAAATCAAAATAGACGT+AGG + chr4_1:51949245-51949264 Msa0554570:intron 40.0%
AACGTAACAGGAGTCTGATA+CGG + chr4_1:51949304-51949323 Msa0554570:intron 40.0%
! TACGGGTACAACATGAGTTT+TGG + chr4_1:51949322-51949341 Msa0554570:intron 40.0%
CATGCATTGCCTAAAAGAGA+TGG - chr4_1:51949544-51949563 None:intergenic 40.0%
GCTTTACATGAAGGAGTAGA+AGG - chr4_1:51949744-51949763 None:intergenic 40.0%
!!! TGGCCATTTTTAGTAACACC+TGG - chr4_1:51949816-51949835 None:intergenic 40.0%
! TAATGGGATTTGGAATGTGG+TGG + chr4_1:51949941-51949960 Msa0554570:CDS 40.0%
ACGTGCTATACAGAAAAAGG+GGG + chr4_1:51949993-51950012 Msa0554570:CDS 40.0%
CAATCCTGCACTTATCACAA+GGG - chr4_1:51950190-51950209 None:intergenic 40.0%
!! AGGATTGGTCTTGTTTCAAC+AGG + chr4_1:51950203-51950222 Msa0554570:CDS 40.0%
ATGCAAACTGTGACAGATCA+CGG + chr4_1:51950299-51950318 Msa0554570:intron 40.0%
TAACACCTGTAGGATTGATG+CGG - chr4_1:51950349-51950368 None:intergenic 40.0%
GTAGTTGATTATGACTGGAG+TGG + chr4_1:51950810-51950829 Msa0554570:intron 40.0%
! GCTCTATGTTGGTTGTTATC+AGG + chr4_1:51951141-51951160 Msa0554570:CDS 40.0%
AATGGTGTAAGCATGGATGT+AGG - chr4_1:51951283-51951302 None:intergenic 40.0%
! ATTTTTCCCTTACGCTTGAG+AGG + chr4_1:51951361-51951380 Msa0554570:CDS 40.0%
! AGCAGTTCTCGTCAATTTTG+CGG + chr4_1:51951399-51951418 Msa0554570:CDS 40.0%
GGAAAAGGCAAATGTAACCA+GGG - chr4_1:51951431-51951450 None:intergenic 40.0%
CAATTTCGTTACCTTCAGTG+GGG - chr4_1:51951452-51951471 None:intergenic 40.0%
CACAATTTCGTTACCTTCAG+TGG - chr4_1:51951454-51951473 None:intergenic 40.0%
CTTCATTGTACCAGAAACCA+AGG + chr4_1:51951765-51951784 Msa0554570:CDS 40.0%
TCATTGTACCAGAAACCAAG+GGG + chr4_1:51951767-51951786 Msa0554570:CDS 40.0%
GTAACAAGGTGACAGATTAC+AGG - chr4_1:51951822-51951841 None:intergenic 40.0%
TTGTCTGTTTACTACGGGAT+TGG + chr4_1:51951969-51951988 Msa0554570:three_prime_UTR 40.0%
TTTACTACGGGATTGGATCA+TGG + chr4_1:51951976-51951995 Msa0554570:three_prime_UTR 40.0%
TGTGAGAAAGAGGAAAGTGG+GGG - chr4_1:51944823-51944842 None:intergenic 45.0%
CTGTGAGAAAGAGGAAAGTG+GGG - chr4_1:51944824-51944843 None:intergenic 45.0%
CCTGTGAGAAAGAGGAAAGT+GGG - chr4_1:51944825-51944844 None:intergenic 45.0%
ACCTGTGAGAAAGAGGAAAG+TGG - chr4_1:51944826-51944845 None:intergenic 45.0%
CACCGAGGTTACAAGTGAAA+GGG + chr4_1:51945723-51945742 Msa0554570:CDS 45.0%
CTCCCTTTCACTTGTAACCT+CGG - chr4_1:51945728-51945747 None:intergenic 45.0%
! CAGAGAGGGAATAGTCTTGA+GGG - chr4_1:51945774-51945793 None:intergenic 45.0%
GAGAAACGTGTTAGCCATGA+AGG + chr4_1:51946031-51946050 Msa0554570:intron 45.0%
GTGTTAGCCATGAAGGATAG+AGG + chr4_1:51946038-51946057 Msa0554570:intron 45.0%
TAGCCATGAAGGATAGAGGA+TGG + chr4_1:51946042-51946061 Msa0554570:intron 45.0%
AGCCATGAAGGATAGAGGAT+GGG + chr4_1:51946043-51946062 Msa0554570:intron 45.0%
CATGTCTCTTGGTCTCTGTT+TGG + chr4_1:51946128-51946147 Msa0554570:intron 45.0%
! CTTGGTCTCTGTTTGGTTCA+TGG + chr4_1:51946135-51946154 Msa0554570:intron 45.0%
TCTAAAAACTAATGCGGCGG+TGG + chr4_1:51946255-51946274 Msa0554570:intron 45.0%
GGCACCAAGTGATTTCTTGA+AGG - chr4_1:51946392-51946411 None:intergenic 45.0%
GGATAGCTAAAAGCTGAAGG+TGG - chr4_1:51946427-51946446 None:intergenic 45.0%
GCTTGGTAAAATGGAGGTTG+AGG + chr4_1:51946541-51946560 Msa0554570:intron 45.0%
CCCATGAACCGAATACCTTA+AGG + chr4_1:51946582-51946601 Msa0554570:intron 45.0%
TGGTGTTCAACTCACTTGTG+TGG + chr4_1:51946620-51946639 Msa0554570:intron 45.0%
CCTAATGTGGATGATCCCTT+GGG + chr4_1:51946653-51946672 Msa0554570:intron 45.0%
CATACAGTTGTTGGGTCATG+GGG - chr4_1:51946683-51946702 None:intergenic 45.0%
! TTTCTCTTCCCAGCTTTTGG+TGG + chr4_1:51946989-51947008 Msa0554570:CDS 45.0%
ATCACCTGAATCCATGTCAG+AGG + chr4_1:51947315-51947334 Msa0554570:intron 45.0%
CTACCCACAACTTCTAATGG+GGG - chr4_1:51947426-51947445 None:intergenic 45.0%
AGCAGTACAACAGGTCATCT+TGG + chr4_1:51947461-51947480 Msa0554570:intron 45.0%
!!! GGGGTTTTGAGGGATTAGTT+AGG - chr4_1:51947916-51947935 None:intergenic 45.0%
!! GAAGTTAGGAGGGGTTTTGA+GGG - chr4_1:51947926-51947945 None:intergenic 45.0%
! AGAAGTTAGGAGGGGTTTTG+AGG - chr4_1:51947927-51947946 None:intergenic 45.0%
CGAGACAACAAGAAGTTAGG+AGG - chr4_1:51947937-51947956 None:intergenic 45.0%
TTGCAGTCACCATCACTAAG+TGG + chr4_1:51948252-51948271 Msa0554570:intron 45.0%
TGCCTTAATAGGCTCTGTGT+TGG + chr4_1:51948481-51948500 Msa0554570:CDS 45.0%
TTGTCATGTCAGCTTCACCT+GGG - chr4_1:51948577-51948596 None:intergenic 45.0%
TTTGTCATGTCAGCTTCACC+TGG - chr4_1:51948578-51948597 None:intergenic 45.0%
AGGAGCGAATGCTGTTATGA+GGG - chr4_1:51948661-51948680 None:intergenic 45.0%
TAGGAGCGAATGCTGTTATG+AGG - chr4_1:51948662-51948681 None:intergenic 45.0%
GGGAGATTGGTATTTGGCAT+AGG + chr4_1:51948702-51948721 Msa0554570:CDS 45.0%
ATATTGTACGTACCCGGTAC+CGG - chr4_1:51949085-51949104 None:intergenic 45.0%
ACGTAACAGGAGTCTGATAC+GGG + chr4_1:51949305-51949324 Msa0554570:intron 45.0%
GATATGACATGCGTGCTTGT+AGG + chr4_1:51949377-51949396 Msa0554570:intron 45.0%
GCTGTCTCTGCAATGTACAT+TGG - chr4_1:51949572-51949591 None:intergenic 45.0%
! GAGACTAGTTGTCCACGTAT+TGG - chr4_1:51949602-51949621 None:intergenic 45.0%
CTGCACACATACGCAACATA+TGG - chr4_1:51949836-51949855 None:intergenic 45.0%
CATATGTTGCGTATGTGTGC+AGG + chr4_1:51949834-51949853 Msa0554570:intron 45.0%
!! GTATGGACTAGGTAGCTTGT+TGG + chr4_1:51949861-51949880 Msa0554570:CDS 45.0%
! TTGTTGGTAGACACTGTTGC+TGG + chr4_1:51949877-51949896 Msa0554570:CDS 45.0%
!! GCACGTAAAAGTATCCACCT+TGG - chr4_1:51949979-51949998 None:intergenic 45.0%
GAAATGTAGGACCTTGAAGC+TGG - chr4_1:51950059-51950078 None:intergenic 45.0%
ACCTTAGGGGAAATGTTTCG+TGG + chr4_1:51950150-51950169 Msa0554570:CDS 45.0%
TCCACGAAACATTTCCCCTA+AGG - chr4_1:51950154-51950173 None:intergenic 45.0%
GTTTCGTGGAAAATGTCGGA+AGG + chr4_1:51950164-51950183 Msa0554570:CDS 45.0%
CCAATCCTGCACTTATCACA+AGG - chr4_1:51950191-51950210 None:intergenic 45.0%
CCTTGTGATAAGTGCAGGAT+TGG + chr4_1:51950188-51950207 Msa0554570:CDS 45.0%
TGCAAACTGTGACAGATCAC+GGG + chr4_1:51950300-51950319 Msa0554570:intron 45.0%
GTTGTCGTTGTTGACAGACT+TGG + chr4_1:51950835-51950854 Msa0554570:CDS 45.0%
TCGTTGTTGACAGACTTGGA+AGG + chr4_1:51950839-51950858 Msa0554570:CDS 45.0%
GGAAGGAGACCTTTACTACT+TGG + chr4_1:51950856-51950875 Msa0554570:CDS 45.0%
AGGAGACCTTTACTACTTGG+CGG + chr4_1:51950859-51950878 Msa0554570:CDS 45.0%
GAAACTCCGCCAAGTAGTAA+AGG - chr4_1:51950868-51950887 None:intergenic 45.0%
TTACTACTTGGCGGAGTTTC+AGG + chr4_1:51950868-51950887 Msa0554570:CDS 45.0%
CATGTGGTTATTTGTGTGGC+AGG + chr4_1:51951042-51951061 Msa0554570:intron 45.0%
!! GTTGGTTTGCTGCTCTATGT+TGG + chr4_1:51951130-51951149 Msa0554570:CDS 45.0%
TCAGATTTCCTTTGGTCCGA+TGG + chr4_1:51951318-51951337 Msa0554570:intron 45.0%
CAGATTTCCTTTGGTCCGAT+GGG + chr4_1:51951319-51951338 Msa0554570:intron 45.0%
GCTATCATAAGCCAACCCAT+CGG - chr4_1:51951337-51951356 None:intergenic 45.0%
GGGAAAAGGCAAATGTAACC+AGG - chr4_1:51951432-51951451 None:intergenic 45.0%
! ATTTGCCTTTTCCCCACTGA+AGG + chr4_1:51951438-51951457 Msa0554570:CDS 45.0%
TTACAGGATTTACTGGGAGC+AGG + chr4_1:51951688-51951707 Msa0554570:intron 45.0%
AGAGGAAAGTGGGGGTTGTT+CGG - chr4_1:51944815-51944834 None:intergenic 50.0%
CCCACTTTCCTCTTTCTCAC+AGG + chr4_1:51944822-51944841 Msa0554570:CDS 50.0%
GAGGTGAACCTGTGAGAAAG+AGG - chr4_1:51944833-51944852 None:intergenic 50.0%
CCTTTCACTTGTAACCTCGG+TGG - chr4_1:51945725-51945744 None:intergenic 50.0%
CCACCGAGGTTACAAGTGAA+AGG + chr4_1:51945722-51945741 Msa0554570:CDS 50.0%
GAAAGGGAGCCTCTGCTTAA+TGG + chr4_1:51945739-51945758 Msa0554570:CDS 50.0%
! GCAGAGAGGGAATAGTCTTG+AGG - chr4_1:51945775-51945794 None:intergenic 50.0%
CGGAAGAATTGCAGCAGAGA+GGG - chr4_1:51945788-51945807 None:intergenic 50.0%
ACGGAAGAATTGCAGCAGAG+AGG - chr4_1:51945789-51945808 None:intergenic 50.0%
CACCCATCCTCTATCCTTCA+TGG - chr4_1:51946048-51946067 None:intergenic 50.0%
GCTTTGCTTTGTCATGGGGA+AGG + chr4_1:51946072-51946091 Msa0554570:intron 50.0%
GTTCATGGAACTTTGTGCCG+TGG + chr4_1:51946150-51946169 Msa0554570:intron 50.0%
TGAAGGTGGCATATGGCATC+TGG - chr4_1:51946413-51946432 None:intergenic 50.0%
CTCACTTGTGTGGTTGCTCT+TGG + chr4_1:51946630-51946649 Msa0554570:intron 50.0%
TGGTTGCTCTTGGCCTAATG+TGG + chr4_1:51946640-51946659 Msa0554570:intron 50.0%
GCCTAATGTGGATGATCCCT+TGG + chr4_1:51946652-51946671 Msa0554570:intron 50.0%
CCCAAGGGATCATCCACATT+AGG - chr4_1:51946656-51946675 None:intergenic 50.0%
GGCCAACACAGAGCCTATTA+AGG - chr4_1:51948486-51948505 None:intergenic 50.0%
CATGGATACGGGTACAGTAC+CGG + chr4_1:51949063-51949082 Msa0554570:intron 50.0%
! AGTTGTCCACGTATTGGCGT+TGG - chr4_1:51949596-51949615 None:intergenic 50.0%
! ACCTTCTGTTCTGAGCTTCC+AGG + chr4_1:51949795-51949814 Msa0554570:intron 50.0%
ACCTGGAAGCTCAGAACAGA+AGG - chr4_1:51949799-51949818 None:intergenic 50.0%
CAAGCTACCTAGTCCATACC+CGG - chr4_1:51949860-51949879 None:intergenic 50.0%
TGGTAGACACTGTTGCTGGA+TGG + chr4_1:51949881-51949900 Msa0554570:CDS 50.0%
TAGACACTGTTGCTGGATGG+CGG + chr4_1:51949884-51949903 Msa0554570:CDS 50.0%
! GCTGGATGGCGGTATATGTT+TGG + chr4_1:51949895-51949914 Msa0554570:CDS 50.0%
AGTATCCACCTTGGAGAAGC+TGG - chr4_1:51949970-51949989 None:intergenic 50.0%
! CGTAGTTTGTGCCAGCTTCA+AGG + chr4_1:51950045-51950064 Msa0554570:CDS 50.0%
AAGGCCCTTGTGATAAGTGC+AGG + chr4_1:51950183-51950202 Msa0554570:CDS 50.0%
GCAAACTGTGACAGATCACG+GGG + chr4_1:51950301-51950320 Msa0554570:intron 50.0%
ACCAAGGAGAATAGAGACCC+GGG - chr4_1:51950503-51950522 None:intergenic 50.0%
CACCAAGGAGAATAGAGACC+CGG - chr4_1:51950504-51950523 None:intergenic 50.0%
! GCAGCAGTTCTTGCTGTAGT+TGG + chr4_1:51951112-51951131 Msa0554570:CDS 50.0%
TTTCCTTTGGTCCGATGGGT+TGG + chr4_1:51951323-51951342 Msa0554570:CDS 50.0%
CCTTTGCCTCTCAAGCGTAA+GGG - chr4_1:51951370-51951389 None:intergenic 50.0%
TCCTTTGCCTCTCAAGCGTA+AGG - chr4_1:51951371-51951390 None:intergenic 50.0%
! CAATTTTGCGGCAAATGCCC+TGG + chr4_1:51951411-51951430 Msa0554570:CDS 50.0%
CGTTACCTTCAGTGGGGAAA+AGG - chr4_1:51951446-51951465 None:intergenic 50.0%
AGTGTAAGCCCCTTGGTTTC+TGG - chr4_1:51951778-51951797 None:intergenic 50.0%
AACCAAGGGGCTTACACTAG+AGG + chr4_1:51951780-51951799 Msa0554570:CDS 50.0%
TTCCTCTAGTGTAAGCCCCT+TGG - chr4_1:51951785-51951804 None:intergenic 50.0%
GAGGAAAGTGGGGGTTGTTC+GGG - chr4_1:51944814-51944833 None:intergenic 55.0%
GGAAGGAAAGTCATCCACCG+AGG + chr4_1:51945708-51945727 Msa0554570:intron 55.0%
CTGTTAGTGGTCCTGTGCTG+AGG + chr4_1:51945961-51945980 Msa0554570:intron 55.0%
AAACTAATGCGGCGGTGGTG+AGG + chr4_1:51946260-51946279 Msa0554570:intron 55.0%
TGTGTCGGATGCTGTTGTCG+TGG + chr4_1:51946487-51946506 Msa0554570:intron 55.0%
CTGTTGTCGTGGCAAGTGTG+AGG + chr4_1:51946498-51946517 Msa0554570:intron 55.0%
GGTGCCTCTGACATGGATTC+AGG - chr4_1:51947322-51947341 None:intergenic 55.0%
!! GAATCCATGTCAGAGGCACC+CGG + chr4_1:51947322-51947341 Msa0554570:intron 55.0%
CATGTCAGCTTCACCTGGGA+AGG - chr4_1:51948573-51948592 None:intergenic 55.0%
!! TACGGGTACAGTACCGGTAC+CGG + chr4_1:51949069-51949088 Msa0554570:intron 55.0%
ACAGCTCCAACGCCAATACG+TGG + chr4_1:51949587-51949606 Msa0554570:CDS 55.0%
TGTTGCGTATGTGTGCAGGC+CGG + chr4_1:51949838-51949857 Msa0554570:intron 55.0%
GCGGCGTAGTAGAGAACACT+TGG - chr4_1:51950330-51950349 None:intergenic 55.0%
CTACGCCGCATCAATCCTAC+AGG + chr4_1:51950341-51950360 Msa0554570:CDS 55.0%
CCTTAGCAGCTGATGCTACC+CGG + chr4_1:51950482-51950501 Msa0554570:CDS 55.0%
CTTAGCAGCTGATGCTACCC+GGG + chr4_1:51950483-51950502 Msa0554570:CDS 55.0%
ACCCGGGTCTCTATTCTCCT+TGG + chr4_1:51950499-51950518 Msa0554570:CDS 55.0%
AAGCCAACCCATCGGACCAA+AGG - chr4_1:51951329-51951348 None:intergenic 55.0%
CCCTTACGCTTGAGAGGCAA+AGG + chr4_1:51951367-51951386 Msa0554570:CDS 55.0%
GTTACCGGGTGCCTCTGACA+TGG - chr4_1:51947329-51947348 None:intergenic 60.0%
!! ACGGGTACAGTACCGGTACC+GGG + chr4_1:51949070-51949089 Msa0554570:intron 60.0%
GTTGCGTATGTGTGCAGGCC+GGG + chr4_1:51949839-51949858 Msa0554570:intron 60.0%
GTATGTGTGCAGGCCGGGTA+TGG + chr4_1:51949844-51949863 Msa0554570:intron 60.0%
GGTGGCTTCCAGCTTCTCCA+AGG + chr4_1:51949959-51949978 Msa0554570:CDS 60.0%
GGCTTCCAGCTTCTCCAAGG+TGG + chr4_1:51949962-51949981 Msa0554570:CDS 60.0%
CCGGGTAGCATCAGCTGCTA+AGG - chr4_1:51950485-51950504 None:intergenic 60.0%
GGGTCATGGGGTGAGCCCAA+GGG - chr4_1:51946671-51946690 None:intergenic 65.0%
TGGGTCATGGGGTGAGCCCA+AGG - chr4_1:51946672-51946691 None:intergenic 65.0%
GTGCAGGCCGGGTATGGACT+AGG + chr4_1:51949850-51949869 Msa0554570:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 51944778 51952032 51944778 ID=Msa0554570;Name=Msa0554570
chr4_1 mRNA 51944778 51952032 51944778 ID=Msa0554570-mRNA-1;Parent=Msa0554570;Name=Msa0554570-mRNA-1;_AED=0.14;_eAED=0.14;_QI=21|1|1|1|1|1|14|207|501
chr4_1 exon 51944778 51944843 51944778 ID=Msa0554570-mRNA-1:exon:14931;Parent=Msa0554570-mRNA-1
chr4_1 exon 51945709 51945806 51945709 ID=Msa0554570-mRNA-1:exon:14932;Parent=Msa0554570-mRNA-1
chr4_1 exon 51946988 51947066 51946988 ID=Msa0554570-mRNA-1:exon:14933;Parent=Msa0554570-mRNA-1
chr4_1 exon 51948258 51948317 51948258 ID=Msa0554570-mRNA-1:exon:14934;Parent=Msa0554570-mRNA-1
chr4_1 exon 51948461 51948527 51948461 ID=Msa0554570-mRNA-1:exon:14935;Parent=Msa0554570-mRNA-1
chr4_1 exon 51948610 51948734 51948610 ID=Msa0554570-mRNA-1:exon:14936;Parent=Msa0554570-mRNA-1
chr4_1 exon 51949554 51949655 51949554 ID=Msa0554570-mRNA-1:exon:14937;Parent=Msa0554570-mRNA-1
chr4_1 exon 51949856 51950224 51949856 ID=Msa0554570-mRNA-1:exon:14938;Parent=Msa0554570-mRNA-1
chr4_1 exon 51950315 51950362 51950315 ID=Msa0554570-mRNA-1:exon:14939;Parent=Msa0554570-mRNA-1
chr4_1 exon 51950469 51950531 51950469 ID=Msa0554570-mRNA-1:exon:14940;Parent=Msa0554570-mRNA-1
chr4_1 exon 51950814 51950894 51950814 ID=Msa0554570-mRNA-1:exon:14941;Parent=Msa0554570-mRNA-1
chr4_1 exon 51951064 51951162 51951064 ID=Msa0554570-mRNA-1:exon:14942;Parent=Msa0554570-mRNA-1
chr4_1 exon 51951322 51951459 51951322 ID=Msa0554570-mRNA-1:exon:14943;Parent=Msa0554570-mRNA-1
chr4_1 exon 51951694 51952032 51951694 ID=Msa0554570-mRNA-1:exon:14944;Parent=Msa0554570-mRNA-1
chr4_1 five_prime_UTR 51944778 51944798 51944778 ID=Msa0554570-mRNA-1:five_prime_utr;Parent=Msa0554570-mRNA-1
chr4_1 CDS 51944799 51944843 51944799 ID=Msa0554570-mRNA-1:cds;Parent=Msa0554570-mRNA-1
chr4_1 CDS 51945709 51945806 51945709 ID=Msa0554570-mRNA-1:cds;Parent=Msa0554570-mRNA-1
chr4_1 CDS 51946988 51947066 51946988 ID=Msa0554570-mRNA-1:cds;Parent=Msa0554570-mRNA-1
chr4_1 CDS 51948258 51948317 51948258 ID=Msa0554570-mRNA-1:cds;Parent=Msa0554570-mRNA-1
chr4_1 CDS 51948461 51948527 51948461 ID=Msa0554570-mRNA-1:cds;Parent=Msa0554570-mRNA-1
chr4_1 CDS 51948610 51948734 51948610 ID=Msa0554570-mRNA-1:cds;Parent=Msa0554570-mRNA-1
chr4_1 CDS 51949554 51949655 51949554 ID=Msa0554570-mRNA-1:cds;Parent=Msa0554570-mRNA-1
chr4_1 CDS 51949856 51950224 51949856 ID=Msa0554570-mRNA-1:cds;Parent=Msa0554570-mRNA-1
chr4_1 CDS 51950315 51950362 51950315 ID=Msa0554570-mRNA-1:cds;Parent=Msa0554570-mRNA-1
chr4_1 CDS 51950469 51950531 51950469 ID=Msa0554570-mRNA-1:cds;Parent=Msa0554570-mRNA-1
chr4_1 CDS 51950814 51950894 51950814 ID=Msa0554570-mRNA-1:cds;Parent=Msa0554570-mRNA-1
chr4_1 CDS 51951064 51951162 51951064 ID=Msa0554570-mRNA-1:cds;Parent=Msa0554570-mRNA-1
chr4_1 CDS 51951322 51951459 51951322 ID=Msa0554570-mRNA-1:cds;Parent=Msa0554570-mRNA-1
chr4_1 CDS 51951694 51951825 51951694 ID=Msa0554570-mRNA-1:cds;Parent=Msa0554570-mRNA-1
chr4_1 three_prime_UTR 51951826 51952032 51951826 ID=Msa0554570-mRNA-1:three_prime_utr;Parent=Msa0554570-mRNA-1
Gene Sequence

>Msa0554570

ATGGCGTCTGATCCCGAACAACCCCCACTTTCCTCTTTCTCACAGGAAGGAAAGTCATCCACCGAGGTTACAAGTGAAAGGGAGCCTCTGCTTAATGGAATTCATGGCCCTCAAGACTATTCCCTCTCTGCTGCAATTCTTCCATTTCTCTTCCCAGCTTTTGGTGGTCTACTATTTGGATATGATATTGGTGCCACATCTAGTGCAACAATTTCCATTCAGTCACCATCACTAAGTGGAATAACTTGGTATGACTTAGACGCTGTTGAAATTGGACTTCTTACTAGCGGATCATTATATGGTGCCTTAATAGGCTCTGTGTTGGCCTTCAATATTGCTGATTTCTTAGGGAGAAGAAGAGAGCTGCTTGTAGCTGCATTGATGTATCTTGTTGGAGCCCTCATAACAGCATTCGCTCCTAATTTTCCTTTATTGGTGATTGGGAGATTGGTATTTGGCATAGGAATTGGACTGGCAATGCATGCTGCTCCAATGTACATTGCAGAGACAGCTCCAACGCCAATACGTGGACAACTAGTCTCTTTGAAAGAGTTCTTTATAGTAATCGGAATTGTTGCCGGGTATGGACTAGGTAGCTTGTTGGTAGACACTGTTGCTGGATGGCGGTATATGTTTGGAATTAGTAGTCCTGTTGCAGTAATAATGGGATTTGGAATGTGGTGGCTTCCAGCTTCTCCAAGGTGGATACTTTTACGTGCTATACAGAAAAAGGGGGATCTTCAGACTTTGAAAGACACTGCAATTCGTAGTTTGTGCCAGCTTCAAGGTCCTACATTTCATGATTCTGCTTCTCAGCAAGTAGATGAGATTATGGCAGAGTTTTCTTATTTAGGTGAAGAAAATGATGTTACCTTAGGGGAAATGTTTCGTGGAAAATGTCGGAAGGCCCTTGTGATAAGTGCAGGATTGGTCTTGTTTCAACAGATCACGGGGCAACCAAGTGTTCTCTACTACGCCGCATCAATCCTACAGAGTGCAGGATTCTCCTTAGCAGCTGATGCTACCCGGGTCTCTATTCTCCTTGGTGTATTTAAGTTGATTATGACTGGAGTGGCTGTTGTCGTTGTTGACAGACTTGGAAGGAGACCTTTACTACTTGGCGGAGTTTCAGGAATAGTAATCTCATTATTCTTACTGGGTTCGTATTACATATTCTTGGATAATGCAGCAGTTCTTGCTGTAGTTGGTTTGCTGCTCTATGTTGGTTGTTATCAGATTTCCTTTGGTCCGATGGGTTGGCTTATGATAGCAGAGATTTTTCCCTTACGCTTGAGAGGCAAAGGACTTAGTATAGCAGTTCTCGTCAATTTTGCGGCAAATGCCCTGGTTACATTTGCCTTTTCCCCACTGAAGGATTTACTGGGAGCAGGAATTTTGTTTTACATATTTTCTGCAATAGCTGTGGCATCTCTTGTATTCATATACTTCATTGTACCAGAAACCAAGGGGCTTACACTAGAGGAAATTGAAGCAAAATGCCTGTAA
Protein sequence

>Msa0554570

MASDPEQPPLSSFSQEGKSSTEVTSEREPLLNGIHGPQDYSLSAAILPFLFPAFGGLLFGYDIGATSSATISIQSPSLSGITWYDLDAVEIGLLTSGSLYGALIGSVLAFNIADFLGRRRELLVAALMYLVGALITAFAPNFPLLVIGRLVFGIGIGLAMHAAPMYIAETAPTPIRGQLVSLKEFFIVIGIVAGYGLGSLLVDTVAGWRYMFGISSPVAVIMGFGMWWLPASPRWILLRAIQKKGDLQTLKDTAIRSLCQLQGPTFHDSASQQVDEIMAEFSYLGEENDVTLGEMFRGKCRKALVISAGLVLFQQITGQPSVLYYAASILQSAGFSLAADATRVSILLGVFKLIMTGVAVVVVDRLGRRPLLLGGVSGIVISLFLLGSYYIFLDNAAVLAVVGLLLYVGCYQISFGPMGWLMIAEIFPLRLRGKGLSIAVLVNFAANALVTFAFSPLKDLLGAGILFYIFSAIAVASLVFIYFIVPETKGLTLEEIEAKCL*