Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0689610 | XP_013462024.1 | 95.883 | 583 | 23 | 1 | 1 | 583 | 5 | 586 | 0.0 | 1163 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0689610 | sp|Q94IR2|CCD1_PHAVU | 31.627 | 547 | 320 | 19 | 50 | 575 | 19 | 532 | 9.10e-69 | 235 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0689610 | A0A072V1Z3 | 95.883 | 583 | 23 | 1 | 1 | 583 | 5 | 586 | 0.0 | 1163 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0689610 | Msa1356540 | 0.873605 | 1.292279e-67 | -8.615850e-47 |
| Msa0383590 | Msa0689610 | 0.800369 | 1.488381e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0689610 | MtrunA17_Chr3g0140121 | 95.883 | 583 | 23 | 1 | 1 | 583 | 5 | 586 | 0.0 | 1163 |
| Msa0689610 | MtrunA17_Chr8g0352261 | 31.703 | 511 | 301 | 16 | 81 | 575 | 86 | 564 | 2.79e-70 | 236 |
| Msa0689610 | MtrunA17_Chr8g0352301 | 31.009 | 545 | 325 | 17 | 50 | 575 | 52 | 564 | 2.92e-69 | 234 |
| Msa0689610 | MtrunA17_Chr8g0352321 | 30.952 | 546 | 326 | 18 | 50 | 575 | 15 | 529 | 1.12e-66 | 226 |
| Msa0689610 | MtrunA17_Chr8g0352311 | 30.092 | 545 | 330 | 17 | 50 | 575 | 53 | 565 | 4.83e-65 | 223 |
| Msa0689610 | MtrunA17_Chr5g0407951 | 28.807 | 545 | 312 | 19 | 58 | 575 | 75 | 570 | 7.12e-57 | 201 |
| Msa0689610 | MtrunA17_Chr5g0407941 | 28.257 | 545 | 314 | 19 | 58 | 575 | 74 | 568 | 1.29e-55 | 197 |
| Msa0689610 | MtrunA17_Chr8g0376401 | 29.651 | 516 | 299 | 19 | 75 | 575 | 131 | 597 | 2.03e-54 | 194 |
| Msa0689610 | MtrunA17_Chr5g0407931 | 26.888 | 543 | 324 | 17 | 58 | 575 | 115 | 609 | 8.10e-53 | 190 |
| Msa0689610 | MtrunA17_Chr2g0312951 | 28.023 | 521 | 305 | 21 | 75 | 575 | 131 | 601 | 1.73e-48 | 178 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0689610 | AT3G63520.1 | 31.760 | 551 | 312 | 23 | 50 | 575 | 16 | 527 | 2.51e-66 | 226 |
| Msa0689610 | AT4G19170.1 | 27.936 | 562 | 331 | 20 | 41 | 575 | 73 | 587 | 2.03e-57 | 203 |
| Msa0689610 | AT1G30100.1 | 30.273 | 512 | 292 | 21 | 82 | 575 | 116 | 580 | 2.92e-52 | 189 |
| Msa0689610 | AT3G14440.1 | 29.615 | 520 | 298 | 23 | 75 | 575 | 119 | 589 | 5.01e-52 | 188 |
| Msa0689610 | AT1G78390.1 | 30.309 | 518 | 294 | 23 | 75 | 575 | 179 | 646 | 2.84e-51 | 187 |
| Msa0689610 | AT4G18350.1 | 28.355 | 529 | 313 | 21 | 66 | 575 | 93 | 574 | 1.62e-47 | 175 |
| Msa0689610 | AT3G24220.1 | 27.730 | 577 | 332 | 24 | 36 | 575 | 39 | 567 | 2.82e-46 | 172 |
| Msa0689610 | AT4G32810.2 | 23.563 | 522 | 332 | 21 | 98 | 576 | 97 | 594 | 1.85e-14 | 77.0 |
Find 107 sgRNAs with CRISPR-Local
Find 482 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGTGGTTGGAATTATTTC+TGG | 0.151099 | 4_4:+56768278 | Msa0689610:CDS |
| TCTGCAAGGCATTTCAATTT+TGG | 0.154452 | 4_4:-56770184 | None:intergenic |
| TTAGCTAGACCTCTATATTT+TGG | 0.194225 | 4_4:-56769729 | None:intergenic |
| TGGTGACAAACCAGTTTATA+TGG | 0.241863 | 4_4:+56769492 | Msa0689610:CDS |
| TTCAGCCGATGGAAAGAAAT+TGG | 0.243369 | 4_4:+56768384 | Msa0689610:intron |
| TTGGTAGGTCAAGTCATATT+TGG | 0.245793 | 4_4:+56767484 | Msa0689610:CDS |
| CCTTGAAAACTTTAAACAAT+TGG | 0.286841 | 4_4:+56768046 | Msa0689610:CDS |
| AAATCAACAAATTCTATCTT+TGG | 0.288217 | 4_4:+56767465 | Msa0689610:CDS |
| GTAACTAGCTCCCCTGTAAT+TGG | 0.289575 | 4_4:-56768227 | None:intergenic |
| TGTCTGCTTATCTCTTCAAC+TGG | 0.296246 | 4_4:+56767676 | Msa0689610:CDS |
| CGGATCAGGTTCAGGAATTA+AGG | 0.302842 | 4_4:-56769383 | None:intergenic |
| ATATGGTATTCCATCCTTAT+AGG | 0.314768 | 4_4:-56769913 | None:intergenic |
| CAAGCCACTGCTTCCATCTA+AGG | 0.317095 | 4_4:+56766467 | Msa0689610:CDS |
| ACCTTTGGATGGCTGGTAAA+AGG | 0.327354 | 4_4:-56768093 | None:intergenic |
| ACCACAGCAAAAGGTTTAAC+TGG | 0.327926 | 4_4:-56768263 | None:intergenic |
| TGCATTATTATTGTATGAAA+TGG | 0.328717 | 4_4:-56766172 | None:intergenic |
| TGGTAGGTCAAGTCATATTT+GGG | 0.331743 | 4_4:+56767485 | Msa0689610:CDS |
| ACAATGTGAAATGTGCAATT+AGG | 0.334412 | 4_4:-56768979 | None:intergenic |
| TCACAGAAAGCTCCAATTAC+AGG | 0.344001 | 4_4:+56768215 | Msa0689610:intron |
| ACCAATGTGTTTGAGCATTC+AGG | 0.348877 | 4_4:+56767970 | Msa0689610:CDS |
| CTTCATGCCAATCTCATTCC+AGG | 0.352333 | 4_4:+56770230 | Msa0689610:CDS |
| TTATACATATATACCTTAGA+TGG | 0.357288 | 4_4:-56766480 | None:intergenic |
| TTTGAACTCGGATCAGGTTC+AGG | 0.357490 | 4_4:-56769391 | None:intergenic |
| TAGAAGTCTGTTTAGATCAA+TGG | 0.358208 | 4_4:-56768759 | None:intergenic |
| CTTGAAAACTTTAAACAATT+GGG | 0.359909 | 4_4:+56768047 | Msa0689610:CDS |
| TTGTTTCTGCCTGCCATAGA+AGG | 0.372415 | 4_4:+56767636 | Msa0689610:CDS |
| AGAGTTCCATATGGGTTTCA+TGG | 0.379567 | 4_4:+56770204 | Msa0689610:CDS |
| TATGCAAACTGGAGAGGTTA+AGG | 0.384542 | 4_4:+56769456 | Msa0689610:CDS |
| GGCGAGTGAATTGCCTTCTA+TGG | 0.387807 | 4_4:-56767649 | None:intergenic |
| ATAGGAAAATCCATATAAAC+TGG | 0.403573 | 4_4:-56769502 | None:intergenic |
| GGAAAGAATATGCAAGGATT+GGG | 0.405464 | 4_4:+56768905 | Msa0689610:CDS |
| ACAGGGGAGCTAGTTACATT+AGG | 0.407012 | 4_4:+56768233 | Msa0689610:CDS |
| ACACCCTCTGGAAAATCATT+AGG | 0.408667 | 4_4:-56766633 | None:intergenic |
| TCAATTTGCAACGAGACTTC+AGG | 0.410000 | 4_4:-56766369 | None:intergenic |
| ACCTTCATCTCTAGGCATAA+AGG | 0.413561 | 4_4:-56769968 | None:intergenic |
| GTAGATTAATAAAGTATGAT+AGG | 0.417481 | 4_4:+56768884 | Msa0689610:intron |
| GAAGAGATAAGCAGACAAAA+TGG | 0.421406 | 4_4:-56767670 | None:intergenic |
| AGGAAAGAATATGCAAGGAT+TGG | 0.439667 | 4_4:+56768904 | Msa0689610:CDS |
| ATGTATTCTTCTCAAACATA+TGG | 0.440364 | 4_4:-56769930 | None:intergenic |
| ATGATCAATGAAAACTTTGT+TGG | 0.443863 | 4_4:+56769523 | Msa0689610:CDS |
| CAACGTGCTTGTTGTTATAG+AGG | 0.446103 | 4_4:-56767572 | None:intergenic |
| TAATAATCCTGGAATGAGAT+TGG | 0.446525 | 4_4:-56770237 | None:intergenic |
| TGCTCCTGTGGAAGAGTTGG+AGG | 0.452956 | 4_4:+56766575 | Msa0689610:CDS |
| ATAATTCCAACCACAGCAAA+AGG | 0.453487 | 4_4:-56768272 | None:intergenic |
| TGGACTTAACAGTTGAGATC+TGG | 0.461942 | 4_4:+56767922 | Msa0689610:intron |
| GCCTTTATGCCTAGAGATGA+AGG | 0.465036 | 4_4:+56769967 | Msa0689610:CDS |
| ATGCCTTGCAGAGTTCCATA+TGG | 0.474751 | 4_4:+56770195 | Msa0689610:CDS |
| CTTTGCTCCTGTGGAAGAGT+TGG | 0.475874 | 4_4:+56766572 | Msa0689610:CDS |
| TTGCAGGTACAATGTGATCA+TGG | 0.476501 | 4_4:+56768724 | Msa0689610:intron |
| TGGCGATTGAATATGCAAAC+TGG | 0.482232 | 4_4:+56769445 | Msa0689610:CDS |
| ATGGATGCAAGTCACAAGTA+TGG | 0.483562 | 4_4:-56766601 | None:intergenic |
| TAACTCAATCAAATGGTTTG+AGG | 0.487504 | 4_4:+56768951 | Msa0689610:CDS |
| ATGAACCAATTTCTTTCCAT+CGG | 0.488762 | 4_4:-56768389 | None:intergenic |
| GAGGGTGTCTACATTAGAAA+TGG | 0.489802 | 4_4:+56766648 | Msa0689610:CDS |
| TGCCTTGCAGAGTTCCATAT+GGG | 0.494358 | 4_4:+56770196 | Msa0689610:CDS |
| GCAATGCTAACTCAATCAAA+TGG | 0.498781 | 4_4:+56768944 | Msa0689610:CDS |
| AAGTTGATATCAAACTAAAC+AGG | 0.498972 | 4_4:+56768413 | Msa0689610:CDS |
| CTGTTTAGATCAATGGTTAG+TGG | 0.499613 | 4_4:-56768752 | None:intergenic |
| TGAGTGGTAGAGCTTGCAAT+AGG | 0.500342 | 4_4:-56769583 | None:intergenic |
| TCTTCGACACCTTCATCTCT+AGG | 0.501357 | 4_4:-56769976 | None:intergenic |
| CTGGAATGAGATTGGCATGA+AGG | 0.503590 | 4_4:-56770229 | None:intergenic |
| GGTTATCTCGTTGTCACGAA+TGG | 0.505048 | 4_4:+56769425 | Msa0689610:CDS |
| TTTCTAATGTAGACACCCTC+TGG | 0.507299 | 4_4:-56766645 | None:intergenic |
| GTCTGCTTATCTCTTCAACT+GGG | 0.507443 | 4_4:+56767677 | Msa0689610:CDS |
| AAGGCTCCATGAAACCCATA+TGG | 0.513364 | 4_4:-56770210 | None:intergenic |
| CACAGAAAGCTCCAATTACA+GGG | 0.517389 | 4_4:+56768216 | Msa0689610:intron |
| TTAGATGTGCCAAAATATAG+AGG | 0.521086 | 4_4:+56769720 | Msa0689610:intron |
| GTTAAGGAGAAAGATCTTTG+TGG | 0.523151 | 4_4:+56769472 | Msa0689610:CDS |
| CAACAAATTCTATCTTTGGT+AGG | 0.528731 | 4_4:+56767469 | Msa0689610:CDS |
| CATATTTGGGTGGAAGGAGA+AGG | 0.530916 | 4_4:+56767498 | Msa0689610:CDS |
| AGTGAATTGCCTTCTATGGC+AGG | 0.531982 | 4_4:-56767645 | None:intergenic |
| ATACTTGTGACTTGCATCCA+TGG | 0.543461 | 4_4:+56766603 | Msa0689610:CDS |
| GTAGAGTAACTTTGCTCCTG+TGG | 0.544515 | 4_4:+56766563 | Msa0689610:intron |
| GTAAATTGTTGCATTCAGAA+AGG | 0.545282 | 4_4:+56766201 | Msa0689610:CDS |
| CGAGTTCAAAAGAATTTGAG+TGG | 0.546001 | 4_4:+56769404 | Msa0689610:CDS |
| AAAAGACGAACCTATAAGGA+TGG | 0.547696 | 4_4:+56769903 | Msa0689610:CDS |
| TCAAGTCATATTTGGGTGGA+AGG | 0.550494 | 4_4:+56767492 | Msa0689610:CDS |
| ATTGGGAACTCAGTGCAGCT+TGG | 0.554608 | 4_4:+56768064 | Msa0689610:CDS |
| GATCTAAACAGACTTCTAAG+AGG | 0.558606 | 4_4:+56768764 | Msa0689610:CDS |
| TGCAGAATTATCTATGTCAA+AGG | 0.558983 | 4_4:+56769773 | Msa0689610:CDS |
| CTCAATCAAATGGTTTGAGG+TGG | 0.560444 | 4_4:+56768954 | Msa0689610:CDS |
| TGTAGTCTTTGCCATGACAT+AGG | 0.566145 | 4_4:+56768436 | Msa0689610:CDS |
| GCTTCCTCCAACTCTTCCAC+AGG | 0.568006 | 4_4:-56766579 | None:intergenic |
| TCCTGAATGCTCAAACACAT+TGG | 0.571180 | 4_4:-56767971 | None:intergenic |
| AACGAGACTTCAGGTAGAGT+TGG | 0.574980 | 4_4:-56766360 | None:intergenic |
| AATCATTAGGAATTCGTCCA+TGG | 0.575693 | 4_4:-56766620 | None:intergenic |
| ATGATAGGAAAGAATATGCA+AGG | 0.577233 | 4_4:+56768899 | Msa0689610:CDS |
| GAAAGAATATGCAAGGATTG+GGG | 0.577458 | 4_4:+56768906 | Msa0689610:CDS |
| GGATCAACAGGTTGTAGTGA+GGG | 0.582027 | 4_4:+56769342 | Msa0689610:intron |
| TCATTGTTAATTACCTTGAG+TGG | 0.583765 | 4_4:-56769599 | None:intergenic |
| GTGTCGAAGAAGATGATGGT+TGG | 0.584534 | 4_4:+56769989 | Msa0689610:CDS |
| ATTGGGGTAATGCCACGCTA+TGG | 0.586172 | 4_4:+56768922 | Msa0689610:CDS |
| TCTATGGCAGGCAGAAACAA+TGG | 0.606534 | 4_4:-56767633 | None:intergenic |
| ATTGCAAGCTCTACCACTCA+AGG | 0.608198 | 4_4:+56769586 | Msa0689610:CDS |
| AACCCATATGGAACTCTGCA+AGG | 0.611082 | 4_4:-56770198 | None:intergenic |
| TTTGTGTAACACCTATGTCA+TGG | 0.612387 | 4_4:-56768447 | None:intergenic |
| GAGTTAGCATTGCCATAGCG+TGG | 0.622537 | 4_4:-56768934 | None:intergenic |
| ATTGAATATGCAAACTGGAG+AGG | 0.626317 | 4_4:+56769450 | Msa0689610:CDS |
| GAAGGTGTCGAAGAAGATGA+TGG | 0.631577 | 4_4:+56769985 | Msa0689610:CDS |
| GGAGCTAGTTACATTAGGTG+TGG | 0.635928 | 4_4:+56768238 | Msa0689610:CDS |
| TAGGTCAAGTCATATTTGGG+TGG | 0.640358 | 4_4:+56767488 | Msa0689610:CDS |
| TATACCTTAGATGGAAGCAG+TGG | 0.654326 | 4_4:-56766471 | None:intergenic |
| CTAAACAGACTTCTAAGAGG+AGG | 0.658104 | 4_4:+56768767 | Msa0689610:CDS |
| TGGATCAACAGGTTGTAGTG+AGG | 0.666393 | 4_4:+56769341 | Msa0689610:intron |
| ATGACATAGGTGTTACACAA+AGG | 0.697603 | 4_4:+56768449 | Msa0689610:CDS |
| GATCAACAGGTTGTAGTGAG+GGG | 0.719118 | 4_4:+56769343 | Msa0689610:intron |
| ACAGAAAGCTCCAATTACAG+GGG | 0.725997 | 4_4:+56768217 | Msa0689610:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGTTTATATAATTTTGTTT+TGG | - | chr4_4:56767124-56767143 | None:intergenic | 10.0% |
| !!! | TATTTTAAAAAATCAAATCA+TGG | + | chr4_4:56767537-56767556 | Msa0689610:CDS | 10.0% |
| !!! | AATGTAAAATATGTTTTTTA+TGG | + | chr4_4:56768692-56768711 | Msa0689610:intron | 10.0% |
| !!! | ATGTAAAATATGTTTTTTAT+GGG | + | chr4_4:56768693-56768712 | Msa0689610:intron | 10.0% |
| !!! | TTTTCATATAAGTTAAAATA+AGG | + | chr4_4:56769142-56769161 | Msa0689610:intron | 10.0% |
| !!! | TAGTTTATATAATTTTGTTT+TGG | - | chr4_4:56767124-56767143 | None:intergenic | 10.0% |
| !!! | TATTTTAAAAAATCAAATCA+TGG | + | chr4_4:56767537-56767556 | Msa0689610:CDS | 10.0% |
| !!! | AATGTAAAATATGTTTTTTA+TGG | + | chr4_4:56768692-56768711 | Msa0689610:intron | 10.0% |
| !!! | ATGTAAAATATGTTTTTTAT+GGG | + | chr4_4:56768693-56768712 | Msa0689610:intron | 10.0% |
| !!! | TTTTCATATAAGTTAAAATA+AGG | + | chr4_4:56769142-56769161 | Msa0689610:intron | 10.0% |
| !! | TTTAGATAGTATATAATCAA+AGG | + | chr4_4:56766727-56766746 | Msa0689610:intron | 15.0% |
| !! | TTAGATAGTATATAATCAAA+GGG | + | chr4_4:56766728-56766747 | Msa0689610:intron | 15.0% |
| !! | ATTTGCAAAGTAAATATAAT+AGG | - | chr4_4:56768131-56768150 | None:intergenic | 15.0% |
| !!! | TATTTAGTTTATTCATGTTT+AGG | + | chr4_4:56768820-56768839 | Msa0689610:intron | 15.0% |
| !!! | ATTTAGTTTATTCATGTTTA+GGG | + | chr4_4:56768821-56768840 | Msa0689610:intron | 15.0% |
| !! | TTCAAATAAGTTAATTCAAA+AGG | + | chr4_4:56769248-56769267 | Msa0689610:intron | 15.0% |
| !! | TTGGTTATTATTAGAATAAA+AGG | + | chr4_4:56769284-56769303 | Msa0689610:intron | 15.0% |
| !! | TGGTTATTATTAGAATAAAA+GGG | + | chr4_4:56769285-56769304 | Msa0689610:intron | 15.0% |
| !! | TTTAGATAGTATATAATCAA+AGG | + | chr4_4:56766727-56766746 | Msa0689610:intron | 15.0% |
| !! | TTAGATAGTATATAATCAAA+GGG | + | chr4_4:56766728-56766747 | Msa0689610:intron | 15.0% |
| !! | ATTTGCAAAGTAAATATAAT+AGG | - | chr4_4:56768131-56768150 | None:intergenic | 15.0% |
| !!! | TATTTAGTTTATTCATGTTT+AGG | + | chr4_4:56768820-56768839 | Msa0689610:intron | 15.0% |
| !!! | ATTTAGTTTATTCATGTTTA+GGG | + | chr4_4:56768821-56768840 | Msa0689610:intron | 15.0% |
| !! | TTCAAATAAGTTAATTCAAA+AGG | + | chr4_4:56769248-56769267 | Msa0689610:intron | 15.0% |
| !! | TTGGTTATTATTAGAATAAA+AGG | + | chr4_4:56769284-56769303 | Msa0689610:intron | 15.0% |
| !! | TGGTTATTATTAGAATAAAA+GGG | + | chr4_4:56769285-56769304 | Msa0689610:intron | 15.0% |
| !! | TGCATTATTATTGTATGAAA+TGG | - | chr4_4:56766175-56766194 | None:intergenic | 20.0% |
| !! | TTATACATATATACCTTAGA+TGG | - | chr4_4:56766483-56766502 | None:intergenic | 20.0% |
| !!! | TTGGATTTTTATTTTTTAGC+CGG | + | chr4_4:56766930-56766949 | Msa0689610:intron | 20.0% |
| !!! | TTCATTGTTATAGTGTTTTT+AGG | + | chr4_4:56766973-56766992 | Msa0689610:intron | 20.0% |
| !! | TAAGCTTAAATATGCATTTA+TGG | + | chr4_4:56767156-56767175 | Msa0689610:intron | 20.0% |
| !! | AAATCAACAAATTCTATCTT+TGG | + | chr4_4:56767465-56767484 | Msa0689610:CDS | 20.0% |
| !! | AATAAACCATTTGCAATAAA+GGG | - | chr4_4:56767748-56767767 | None:intergenic | 20.0% |
| !! | CTTGAAAACTTTAAACAATT+GGG | + | chr4_4:56768047-56768066 | Msa0689610:CDS | 20.0% |
| !!! | ATATTACAAAACTAGTTTGT+AGG | + | chr4_4:56768530-56768549 | Msa0689610:intron | 20.0% |
| !!! | TATTACAAAACTAGTTTGTA+GGG | + | chr4_4:56768531-56768550 | Msa0689610:intron | 20.0% |
| !!! | TTTACATTGCATTTTTTTTC+CGG | - | chr4_4:56768680-56768699 | None:intergenic | 20.0% |
| !! | ACATGAATAAACTAAATAGA+AGG | - | chr4_4:56768818-56768837 | None:intergenic | 20.0% |
| !! | GTAGATTAATAAAGTATGAT+AGG | + | chr4_4:56768884-56768903 | Msa0689610:intron | 20.0% |
| !! | AATCATTTATATAGTACTTC+AGG | - | chr4_4:56769042-56769061 | None:intergenic | 20.0% |
| !!! | GAAGTACTATATAAATGATT+CGG | + | chr4_4:56769042-56769061 | Msa0689610:intron | 20.0% |
| !! | TAATTATATGCAAGATTGTT+TGG | - | chr4_4:56769214-56769233 | None:intergenic | 20.0% |
| !!! | ATTTATATAGAAAGTACGAA+AGG | - | chr4_4:56769670-56769689 | None:intergenic | 20.0% |
| !! | AATTATATGAAATTACCACT+AGG | - | chr4_4:56769830-56769849 | None:intergenic | 20.0% |
| !! | TGCATTATTATTGTATGAAA+TGG | - | chr4_4:56766175-56766194 | None:intergenic | 20.0% |
| !! | TTATACATATATACCTTAGA+TGG | - | chr4_4:56766483-56766502 | None:intergenic | 20.0% |
| !!! | TTGGATTTTTATTTTTTAGC+CGG | + | chr4_4:56766930-56766949 | Msa0689610:intron | 20.0% |
| !!! | TTCATTGTTATAGTGTTTTT+AGG | + | chr4_4:56766973-56766992 | Msa0689610:intron | 20.0% |
| !! | TAAGCTTAAATATGCATTTA+TGG | + | chr4_4:56767156-56767175 | Msa0689610:intron | 20.0% |
| !! | AAATCAACAAATTCTATCTT+TGG | + | chr4_4:56767465-56767484 | Msa0689610:CDS | 20.0% |
| !! | AATAAACCATTTGCAATAAA+GGG | - | chr4_4:56767748-56767767 | None:intergenic | 20.0% |
| !! | CTTGAAAACTTTAAACAATT+GGG | + | chr4_4:56768047-56768066 | Msa0689610:CDS | 20.0% |
| !!! | ATATTACAAAACTAGTTTGT+AGG | + | chr4_4:56768530-56768549 | Msa0689610:intron | 20.0% |
| !!! | TATTACAAAACTAGTTTGTA+GGG | + | chr4_4:56768531-56768550 | Msa0689610:intron | 20.0% |
| !!! | TTTACATTGCATTTTTTTTC+CGG | - | chr4_4:56768680-56768699 | None:intergenic | 20.0% |
| !! | ACATGAATAAACTAAATAGA+AGG | - | chr4_4:56768818-56768837 | None:intergenic | 20.0% |
| !! | GTAGATTAATAAAGTATGAT+AGG | + | chr4_4:56768884-56768903 | Msa0689610:intron | 20.0% |
| !! | AATCATTTATATAGTACTTC+AGG | - | chr4_4:56769042-56769061 | None:intergenic | 20.0% |
| !!! | GAAGTACTATATAAATGATT+CGG | + | chr4_4:56769042-56769061 | Msa0689610:intron | 20.0% |
| !! | TAATTATATGCAAGATTGTT+TGG | - | chr4_4:56769214-56769233 | None:intergenic | 20.0% |
| !!! | ATTTATATAGAAAGTACGAA+AGG | - | chr4_4:56769670-56769689 | None:intergenic | 20.0% |
| !! | AATTATATGAAATTACCACT+AGG | - | chr4_4:56769830-56769849 | None:intergenic | 20.0% |
| !! | ACAGTATTTTTCACAGTTTT+GGG | - | chr4_4:56766399-56766418 | None:intergenic | 25.0% |
| ! | AAAGCAAAGACAAGAAATAA+TGG | - | chr4_4:56767280-56767299 | None:intergenic | 25.0% |
| ! | TACATTGATATATAATGTGC+AGG | + | chr4_4:56767417-56767436 | Msa0689610:intron | 25.0% |
| ! | AAAAATCAAATCATGGAAGT+TGG | + | chr4_4:56767544-56767563 | Msa0689610:CDS | 25.0% |
| ! | TGCTAATCATGAAATGAATT+AGG | - | chr4_4:56767710-56767729 | None:intergenic | 25.0% |
| ! | GAATAAACCATTTGCAATAA+AGG | - | chr4_4:56767749-56767768 | None:intergenic | 25.0% |
| ! | ACTCATTTGGTTAAATCTTA+TGG | + | chr4_4:56767902-56767921 | Msa0689610:intron | 25.0% |
| ! | GAAAAAATATCAATCTCTTG+TGG | - | chr4_4:56768027-56768046 | None:intergenic | 25.0% |
| !!! | CCAATTGTTTAAAGTTTTCA+AGG | - | chr4_4:56768049-56768068 | None:intergenic | 25.0% |
| ! | CCTTGAAAACTTTAAACAAT+TGG | + | chr4_4:56768046-56768065 | Msa0689610:CDS | 25.0% |
| !!! | TATTTTTTTTTTTCAGCCGA+TGG | + | chr4_4:56768373-56768392 | Msa0689610:intron | 25.0% |
| !!! | AAGTTGATATCAAACTAAAC+AGG | + | chr4_4:56768413-56768432 | Msa0689610:CDS | 25.0% |
| !! | ATGCGTATGTATTTTATATC+TGG | - | chr4_4:56768653-56768672 | None:intergenic | 25.0% |
| !!! | TTTATGGGAATTTTTTTTGC+AGG | + | chr4_4:56768708-56768727 | Msa0689610:intron | 25.0% |
| ! | AAAAGGCTCATATCATATAT+TGG | + | chr4_4:56769265-56769284 | Msa0689610:intron | 25.0% |
| ! | ATAGGAAAATCCATATAAAC+TGG | - | chr4_4:56769505-56769524 | None:intergenic | 25.0% |
| !! | ACAAAGTTTTCATTGATCAT+AGG | - | chr4_4:56769523-56769542 | None:intergenic | 25.0% |
| ! | ATGATCAATGAAAACTTTGT+TGG | + | chr4_4:56769523-56769542 | Msa0689610:CDS | 25.0% |
| ! | TTCTCTGGATAAAGAATAAA+CGG | - | chr4_4:56769630-56769649 | None:intergenic | 25.0% |
| ! | AATTACATGTTACAATTCTC+TGG | - | chr4_4:56769645-56769664 | None:intergenic | 25.0% |
| ! | TTATCTATGTCAAAGGTAAA+AGG | + | chr4_4:56769780-56769799 | Msa0689610:intron | 25.0% |
| !! | CATTGATAATAATGCTACTA+AGG | - | chr4_4:56769853-56769872 | None:intergenic | 25.0% |
| ! | ATGTATTCTTCTCAAACATA+TGG | - | chr4_4:56769933-56769952 | None:intergenic | 25.0% |
| !! | AGAAGAATACATTTTGCAAT+GGG | + | chr4_4:56769941-56769960 | Msa0689610:CDS | 25.0% |
| !!! | ACATTTATCGATTTTCTTTC+AGG | + | chr4_4:56770119-56770138 | Msa0689610:intron | 25.0% |
| !! | ATCGATACAAAGAATTTTTC+TGG | + | chr4_4:56770150-56770169 | Msa0689610:CDS | 25.0% |
| !! | ACAGTATTTTTCACAGTTTT+GGG | - | chr4_4:56766399-56766418 | None:intergenic | 25.0% |
| ! | AAAGCAAAGACAAGAAATAA+TGG | - | chr4_4:56767280-56767299 | None:intergenic | 25.0% |
| ! | TACATTGATATATAATGTGC+AGG | + | chr4_4:56767417-56767436 | Msa0689610:intron | 25.0% |
| ! | AAAAATCAAATCATGGAAGT+TGG | + | chr4_4:56767544-56767563 | Msa0689610:CDS | 25.0% |
| ! | TGCTAATCATGAAATGAATT+AGG | - | chr4_4:56767710-56767729 | None:intergenic | 25.0% |
| ! | GAATAAACCATTTGCAATAA+AGG | - | chr4_4:56767749-56767768 | None:intergenic | 25.0% |
| ! | ACTCATTTGGTTAAATCTTA+TGG | + | chr4_4:56767902-56767921 | Msa0689610:intron | 25.0% |
| ! | GAAAAAATATCAATCTCTTG+TGG | - | chr4_4:56768027-56768046 | None:intergenic | 25.0% |
| !!! | CCAATTGTTTAAAGTTTTCA+AGG | - | chr4_4:56768049-56768068 | None:intergenic | 25.0% |
| ! | CCTTGAAAACTTTAAACAAT+TGG | + | chr4_4:56768046-56768065 | Msa0689610:CDS | 25.0% |
| !!! | TATTTTTTTTTTTCAGCCGA+TGG | + | chr4_4:56768373-56768392 | Msa0689610:intron | 25.0% |
| !!! | AAGTTGATATCAAACTAAAC+AGG | + | chr4_4:56768413-56768432 | Msa0689610:CDS | 25.0% |
| !! | ATGCGTATGTATTTTATATC+TGG | - | chr4_4:56768653-56768672 | None:intergenic | 25.0% |
| !!! | TTTATGGGAATTTTTTTTGC+AGG | + | chr4_4:56768708-56768727 | Msa0689610:intron | 25.0% |
| ! | AAAAGGCTCATATCATATAT+TGG | + | chr4_4:56769265-56769284 | Msa0689610:intron | 25.0% |
| ! | ATAGGAAAATCCATATAAAC+TGG | - | chr4_4:56769505-56769524 | None:intergenic | 25.0% |
| !! | ACAAAGTTTTCATTGATCAT+AGG | - | chr4_4:56769523-56769542 | None:intergenic | 25.0% |
| ! | ATGATCAATGAAAACTTTGT+TGG | + | chr4_4:56769523-56769542 | Msa0689610:CDS | 25.0% |
| ! | TTCTCTGGATAAAGAATAAA+CGG | - | chr4_4:56769630-56769649 | None:intergenic | 25.0% |
| ! | AATTACATGTTACAATTCTC+TGG | - | chr4_4:56769645-56769664 | None:intergenic | 25.0% |
| ! | TTATCTATGTCAAAGGTAAA+AGG | + | chr4_4:56769780-56769799 | Msa0689610:intron | 25.0% |
| !! | CATTGATAATAATGCTACTA+AGG | - | chr4_4:56769853-56769872 | None:intergenic | 25.0% |
| ! | ATGTATTCTTCTCAAACATA+TGG | - | chr4_4:56769933-56769952 | None:intergenic | 25.0% |
| !! | AGAAGAATACATTTTGCAAT+GGG | + | chr4_4:56769941-56769960 | Msa0689610:CDS | 25.0% |
| !!! | ACATTTATCGATTTTCTTTC+AGG | + | chr4_4:56770119-56770138 | Msa0689610:intron | 25.0% |
| !! | ATCGATACAAAGAATTTTTC+TGG | + | chr4_4:56770150-56770169 | Msa0689610:CDS | 25.0% |
| GTAAATTGTTGCATTCAGAA+AGG | + | chr4_4:56766201-56766220 | Msa0689610:CDS | 30.0% | |
| !!! | TCCACTCTTCTCTATTTTTA+AGG | + | chr4_4:56766245-56766264 | Msa0689610:CDS | 30.0% |
| ACCTTAAAAATAGAGAAGAG+TGG | - | chr4_4:56766249-56766268 | None:intergenic | 30.0% | |
| ! | TGTTTTCACACATTTTTCAC+TGG | + | chr4_4:56766293-56766312 | Msa0689610:intron | 30.0% |
| ! | CACAGTATTTTTCACAGTTT+TGG | - | chr4_4:56766400-56766419 | None:intergenic | 30.0% |
| CAAAACTGTGAAAAATACTG+TGG | + | chr4_4:56766398-56766417 | Msa0689610:CDS | 30.0% | |
| ! | TAAATTGATCGACGTTTTTG+TGG | + | chr4_4:56766422-56766441 | Msa0689610:CDS | 30.0% |
| ! | AATTCCTAATGATTTTCCAG+AGG | + | chr4_4:56766629-56766648 | Msa0689610:CDS | 30.0% |
| ! | ATTCCTAATGATTTTCCAGA+GGG | + | chr4_4:56766630-56766649 | Msa0689610:CDS | 30.0% |
| ! | TAGCTTGATGATCAATTCAA+GGG | + | chr4_4:56766780-56766799 | Msa0689610:intron | 30.0% |
| !! | TTCAACCATTGATTTGAGAT+CGG | + | chr4_4:56767001-56767020 | Msa0689610:intron | 30.0% |
| TAGGACTCAAAAATATGCAT+TGG | - | chr4_4:56767240-56767259 | None:intergenic | 30.0% | |
| !! | AGAAAAGAAACCTAGTTCTA+TGG | - | chr4_4:56767329-56767348 | None:intergenic | 30.0% |
| ! | AGGTTTCTTTTCTAACGAAA+AGG | + | chr4_4:56767336-56767355 | Msa0689610:intron | 30.0% |
| CAATACATATATTAAGCGTC+AGG | - | chr4_4:56767389-56767408 | None:intergenic | 30.0% | |
| CAACAAATTCTATCTTTGGT+AGG | + | chr4_4:56767469-56767488 | Msa0689610:CDS | 30.0% | |
| TAGTCCTCAATTATAAGAGT+CGG | + | chr4_4:56767793-56767812 | Msa0689610:intron | 30.0% | |
| GTTCATAATACCGTCTTTAA+GGG | - | chr4_4:56767884-56767903 | None:intergenic | 30.0% | |
| AGTTCATAATACCGTCTTTA+AGG | - | chr4_4:56767885-56767904 | None:intergenic | 30.0% | |
| AAACCAAAAAAACCTTTGGA+TGG | - | chr4_4:56768107-56768126 | None:intergenic | 30.0% | |
| AGGTAAACCAAAAAAACCTT+TGG | - | chr4_4:56768111-56768130 | None:intergenic | 30.0% | |
| ATGAACCAATTTCTTTCCAT+CGG | - | chr4_4:56768392-56768411 | None:intergenic | 30.0% | |
| TAGATTATTGACGATTATGC+TGG | + | chr4_4:56768472-56768491 | Msa0689610:intron | 30.0% | |
| AAAATACATACGCATTTGAC+CGG | + | chr4_4:56768658-56768677 | Msa0689610:intron | 30.0% | |
| TAGAAGTCTGTTTAGATCAA+TGG | - | chr4_4:56768762-56768781 | None:intergenic | 30.0% | |
| ATGATAGGAAAGAATATGCA+AGG | + | chr4_4:56768899-56768918 | Msa0689610:CDS | 30.0% | |
| TAACTCAATCAAATGGTTTG+AGG | + | chr4_4:56768951-56768970 | Msa0689610:CDS | 30.0% | |
| ACAATGTGAAATGTGCAATT+AGG | - | chr4_4:56768982-56769001 | None:intergenic | 30.0% | |
| ! | TCACATTGTCAATTCTTTTG+AGG | + | chr4_4:56768993-56769012 | Msa0689610:CDS | 30.0% |
| !! | ATTGTCAATTCTTTTGAGGA+TGG | + | chr4_4:56768997-56769016 | Msa0689610:CDS | 30.0% |
| ! | CACTCAAATTCTTTTGAACT+CGG | - | chr4_4:56769406-56769425 | None:intergenic | 30.0% |
| TCATTGTTAATTACCTTGAG+TGG | - | chr4_4:56769602-56769621 | None:intergenic | 30.0% | |
| TTAGATGTGCCAAAATATAG+AGG | + | chr4_4:56769720-56769739 | Msa0689610:intron | 30.0% | |
| ! | TTAGCTAGACCTCTATATTT+TGG | - | chr4_4:56769732-56769751 | None:intergenic | 30.0% |
| TGCAGAATTATCTATGTCAA+AGG | + | chr4_4:56769773-56769792 | Msa0689610:CDS | 30.0% | |
| ! | TTAACATTTCCTTTTCCTAG+TGG | + | chr4_4:56769812-56769831 | Msa0689610:intron | 30.0% |
| ATGAAATTACCACTAGGAAA+AGG | - | chr4_4:56769824-56769843 | None:intergenic | 30.0% | |
| ATATGGTATTCCATCCTTAT+AGG | - | chr4_4:56769916-56769935 | None:intergenic | 30.0% | |
| ! | GAGAAGAATACATTTTGCAA+TGG | + | chr4_4:56769940-56769959 | Msa0689610:CDS | 30.0% |
| ! | GAAGAATACATTTTGCAATG+GGG | + | chr4_4:56769942-56769961 | Msa0689610:CDS | 30.0% |
| !! | AAAGAATTTTTCTGGCGATA+CGG | + | chr4_4:56770158-56770177 | Msa0689610:CDS | 30.0% |
| TAATAATCCTGGAATGAGAT+TGG | - | chr4_4:56770240-56770259 | None:intergenic | 30.0% | |
| GTAAATTGTTGCATTCAGAA+AGG | + | chr4_4:56766201-56766220 | Msa0689610:CDS | 30.0% | |
| !!! | TCCACTCTTCTCTATTTTTA+AGG | + | chr4_4:56766245-56766264 | Msa0689610:CDS | 30.0% |
| ACCTTAAAAATAGAGAAGAG+TGG | - | chr4_4:56766249-56766268 | None:intergenic | 30.0% | |
| ! | TGTTTTCACACATTTTTCAC+TGG | + | chr4_4:56766293-56766312 | Msa0689610:intron | 30.0% |
| ! | CACAGTATTTTTCACAGTTT+TGG | - | chr4_4:56766400-56766419 | None:intergenic | 30.0% |
| CAAAACTGTGAAAAATACTG+TGG | + | chr4_4:56766398-56766417 | Msa0689610:CDS | 30.0% | |
| ! | TAAATTGATCGACGTTTTTG+TGG | + | chr4_4:56766422-56766441 | Msa0689610:CDS | 30.0% |
| ! | AATTCCTAATGATTTTCCAG+AGG | + | chr4_4:56766629-56766648 | Msa0689610:CDS | 30.0% |
| ! | ATTCCTAATGATTTTCCAGA+GGG | + | chr4_4:56766630-56766649 | Msa0689610:CDS | 30.0% |
| ! | TAGCTTGATGATCAATTCAA+GGG | + | chr4_4:56766780-56766799 | Msa0689610:intron | 30.0% |
| !! | TTCAACCATTGATTTGAGAT+CGG | + | chr4_4:56767001-56767020 | Msa0689610:intron | 30.0% |
| TAGGACTCAAAAATATGCAT+TGG | - | chr4_4:56767240-56767259 | None:intergenic | 30.0% | |
| !! | AGAAAAGAAACCTAGTTCTA+TGG | - | chr4_4:56767329-56767348 | None:intergenic | 30.0% |
| ! | AGGTTTCTTTTCTAACGAAA+AGG | + | chr4_4:56767336-56767355 | Msa0689610:intron | 30.0% |
| CAATACATATATTAAGCGTC+AGG | - | chr4_4:56767389-56767408 | None:intergenic | 30.0% | |
| CAACAAATTCTATCTTTGGT+AGG | + | chr4_4:56767469-56767488 | Msa0689610:CDS | 30.0% | |
| TAGTCCTCAATTATAAGAGT+CGG | + | chr4_4:56767793-56767812 | Msa0689610:intron | 30.0% | |
| GTTCATAATACCGTCTTTAA+GGG | - | chr4_4:56767884-56767903 | None:intergenic | 30.0% | |
| AGTTCATAATACCGTCTTTA+AGG | - | chr4_4:56767885-56767904 | None:intergenic | 30.0% | |
| AAACCAAAAAAACCTTTGGA+TGG | - | chr4_4:56768107-56768126 | None:intergenic | 30.0% | |
| AGGTAAACCAAAAAAACCTT+TGG | - | chr4_4:56768111-56768130 | None:intergenic | 30.0% | |
| ATGAACCAATTTCTTTCCAT+CGG | - | chr4_4:56768392-56768411 | None:intergenic | 30.0% | |
| TAGATTATTGACGATTATGC+TGG | + | chr4_4:56768472-56768491 | Msa0689610:intron | 30.0% | |
| AAAATACATACGCATTTGAC+CGG | + | chr4_4:56768658-56768677 | Msa0689610:intron | 30.0% | |
| TAGAAGTCTGTTTAGATCAA+TGG | - | chr4_4:56768762-56768781 | None:intergenic | 30.0% | |
| ATGATAGGAAAGAATATGCA+AGG | + | chr4_4:56768899-56768918 | Msa0689610:CDS | 30.0% | |
| TAACTCAATCAAATGGTTTG+AGG | + | chr4_4:56768951-56768970 | Msa0689610:CDS | 30.0% | |
| ACAATGTGAAATGTGCAATT+AGG | - | chr4_4:56768982-56769001 | None:intergenic | 30.0% | |
| ! | TCACATTGTCAATTCTTTTG+AGG | + | chr4_4:56768993-56769012 | Msa0689610:CDS | 30.0% |
| !! | ATTGTCAATTCTTTTGAGGA+TGG | + | chr4_4:56768997-56769016 | Msa0689610:CDS | 30.0% |
| ! | CACTCAAATTCTTTTGAACT+CGG | - | chr4_4:56769406-56769425 | None:intergenic | 30.0% |
| TCATTGTTAATTACCTTGAG+TGG | - | chr4_4:56769602-56769621 | None:intergenic | 30.0% | |
| TTAGATGTGCCAAAATATAG+AGG | + | chr4_4:56769720-56769739 | Msa0689610:intron | 30.0% | |
| ! | TTAGCTAGACCTCTATATTT+TGG | - | chr4_4:56769732-56769751 | None:intergenic | 30.0% |
| TGCAGAATTATCTATGTCAA+AGG | + | chr4_4:56769773-56769792 | Msa0689610:CDS | 30.0% | |
| ! | TTAACATTTCCTTTTCCTAG+TGG | + | chr4_4:56769812-56769831 | Msa0689610:intron | 30.0% |
| ATGAAATTACCACTAGGAAA+AGG | - | chr4_4:56769824-56769843 | None:intergenic | 30.0% | |
| ATATGGTATTCCATCCTTAT+AGG | - | chr4_4:56769916-56769935 | None:intergenic | 30.0% | |
| ! | GAGAAGAATACATTTTGCAA+TGG | + | chr4_4:56769940-56769959 | Msa0689610:CDS | 30.0% |
| ! | GAAGAATACATTTTGCAATG+GGG | + | chr4_4:56769942-56769961 | Msa0689610:CDS | 30.0% |
| !! | AAAGAATTTTTCTGGCGATA+CGG | + | chr4_4:56770158-56770177 | Msa0689610:CDS | 30.0% |
| TAATAATCCTGGAATGAGAT+TGG | - | chr4_4:56770240-56770259 | None:intergenic | 30.0% | |
| AATCATTAGGAATTCGTCCA+TGG | - | chr4_4:56766623-56766642 | None:intergenic | 35.0% | |
| ! | CTAGCTTGATGATCAATTCA+AGG | + | chr4_4:56766779-56766798 | Msa0689610:intron | 35.0% |
| GACTCAAAAATATGCATTGG+AGG | - | chr4_4:56767237-56767256 | None:intergenic | 35.0% | |
| !! | AAACCTAGTTCTATGGTTCT+GGG | - | chr4_4:56767322-56767341 | None:intergenic | 35.0% |
| TATATTAAGCGTCAGGCTTA+TGG | - | chr4_4:56767382-56767401 | None:intergenic | 35.0% | |
| TTGGTAGGTCAAGTCATATT+TGG | + | chr4_4:56767484-56767503 | Msa0689610:CDS | 35.0% | |
| TGGTAGGTCAAGTCATATTT+GGG | + | chr4_4:56767485-56767504 | Msa0689610:CDS | 35.0% | |
| GAAGAGATAAGCAGACAAAA+TGG | - | chr4_4:56767673-56767692 | None:intergenic | 35.0% | |
| TAAGCACCCTTTATTGCAAA+TGG | + | chr4_4:56767739-56767758 | Msa0689610:intron | 35.0% | |
| TCCCGTAAATTGAATGATGT+CGG | + | chr4_4:56767857-56767876 | Msa0689610:intron | 35.0% | |
| ACCGACATCATTCAATTTAC+GGG | - | chr4_4:56767861-56767880 | None:intergenic | 35.0% | |
| GACCGACATCATTCAATTTA+CGG | - | chr4_4:56767862-56767881 | None:intergenic | 35.0% | |
| GACGGTATTATGAACTCATT+TGG | + | chr4_4:56767889-56767908 | Msa0689610:intron | 35.0% | |
| AATTGGAGCTTTCTGTGATA+TGG | - | chr4_4:56768213-56768232 | None:intergenic | 35.0% | |
| ATAATTCCAACCACAGCAAA+AGG | - | chr4_4:56768275-56768294 | None:intergenic | 35.0% | |
| TTTGTGTAACACCTATGTCA+TGG | - | chr4_4:56768450-56768469 | None:intergenic | 35.0% | |
| ! | ATGACATAGGTGTTACACAA+AGG | + | chr4_4:56768449-56768468 | Msa0689610:CDS | 35.0% |
| ! | ACGCAAGTCACTTTATATGT+AGG | + | chr4_4:56768607-56768626 | Msa0689610:intron | 35.0% |
| CTGTTTAGATCAATGGTTAG+TGG | - | chr4_4:56768755-56768774 | None:intergenic | 35.0% | |
| GATCTAAACAGACTTCTAAG+AGG | + | chr4_4:56768764-56768783 | Msa0689610:CDS | 35.0% | |
| TTCAGTTCATATGTACTCAC+TGG | - | chr4_4:56768793-56768812 | None:intergenic | 35.0% | |
| AGGAAAGAATATGCAAGGAT+TGG | + | chr4_4:56768904-56768923 | Msa0689610:CDS | 35.0% | |
| GGAAAGAATATGCAAGGATT+GGG | + | chr4_4:56768905-56768924 | Msa0689610:CDS | 35.0% | |
| GAAAGAATATGCAAGGATTG+GGG | + | chr4_4:56768906-56768925 | Msa0689610:CDS | 35.0% | |
| GCAATGCTAACTCAATCAAA+TGG | + | chr4_4:56768944-56768963 | Msa0689610:CDS | 35.0% | |
| !! | ATAAATGATTCGGTGCTGTT+TGG | + | chr4_4:56769052-56769071 | Msa0689610:intron | 35.0% |
| AGATTGTTTGGAAGAGCTTA+TGG | - | chr4_4:56769202-56769221 | None:intergenic | 35.0% | |
| ! | AGGGCTGCATTAAATTTTGA+AGG | + | chr4_4:56769304-56769323 | Msa0689610:intron | 35.0% |
| ! | AATTCTTTTGAACTCGGATC+AGG | - | chr4_4:56769400-56769419 | None:intergenic | 35.0% |
| CGAGTTCAAAAGAATTTGAG+TGG | + | chr4_4:56769404-56769423 | Msa0689610:CDS | 35.0% | |
| ATTGAATATGCAAACTGGAG+AGG | + | chr4_4:56769450-56769469 | Msa0689610:CDS | 35.0% | |
| GTTAAGGAGAAAGATCTTTG+TGG | + | chr4_4:56769472-56769491 | Msa0689610:CDS | 35.0% | |
| TGGTGACAAACCAGTTTATA+TGG | + | chr4_4:56769492-56769511 | Msa0689610:CDS | 35.0% | |
| GAGAAAAAGACGAACCTATA+AGG | + | chr4_4:56769899-56769918 | Msa0689610:CDS | 35.0% | |
| AAAAGACGAACCTATAAGGA+TGG | + | chr4_4:56769903-56769922 | Msa0689610:CDS | 35.0% | |
| GATACTAACACATCTCAAGT+AGG | + | chr4_4:56770036-56770055 | Msa0689610:intron | 35.0% | |
| !! | TCTGCAAGGCATTTCAATTT+TGG | - | chr4_4:56770187-56770206 | None:intergenic | 35.0% |
| AATCATTAGGAATTCGTCCA+TGG | - | chr4_4:56766623-56766642 | None:intergenic | 35.0% | |
| ! | CTAGCTTGATGATCAATTCA+AGG | + | chr4_4:56766779-56766798 | Msa0689610:intron | 35.0% |
| GACTCAAAAATATGCATTGG+AGG | - | chr4_4:56767237-56767256 | None:intergenic | 35.0% | |
| !! | AAACCTAGTTCTATGGTTCT+GGG | - | chr4_4:56767322-56767341 | None:intergenic | 35.0% |
| TATATTAAGCGTCAGGCTTA+TGG | - | chr4_4:56767382-56767401 | None:intergenic | 35.0% | |
| TTGGTAGGTCAAGTCATATT+TGG | + | chr4_4:56767484-56767503 | Msa0689610:CDS | 35.0% | |
| TGGTAGGTCAAGTCATATTT+GGG | + | chr4_4:56767485-56767504 | Msa0689610:CDS | 35.0% | |
| GAAGAGATAAGCAGACAAAA+TGG | - | chr4_4:56767673-56767692 | None:intergenic | 35.0% | |
| TAAGCACCCTTTATTGCAAA+TGG | + | chr4_4:56767739-56767758 | Msa0689610:intron | 35.0% | |
| TCCCGTAAATTGAATGATGT+CGG | + | chr4_4:56767857-56767876 | Msa0689610:intron | 35.0% | |
| ACCGACATCATTCAATTTAC+GGG | - | chr4_4:56767861-56767880 | None:intergenic | 35.0% | |
| GACCGACATCATTCAATTTA+CGG | - | chr4_4:56767862-56767881 | None:intergenic | 35.0% | |
| GACGGTATTATGAACTCATT+TGG | + | chr4_4:56767889-56767908 | Msa0689610:intron | 35.0% | |
| AATTGGAGCTTTCTGTGATA+TGG | - | chr4_4:56768213-56768232 | None:intergenic | 35.0% | |
| ATAATTCCAACCACAGCAAA+AGG | - | chr4_4:56768275-56768294 | None:intergenic | 35.0% | |
| TTTGTGTAACACCTATGTCA+TGG | - | chr4_4:56768450-56768469 | None:intergenic | 35.0% | |
| ! | ATGACATAGGTGTTACACAA+AGG | + | chr4_4:56768449-56768468 | Msa0689610:CDS | 35.0% |
| ! | ACGCAAGTCACTTTATATGT+AGG | + | chr4_4:56768607-56768626 | Msa0689610:intron | 35.0% |
| CTGTTTAGATCAATGGTTAG+TGG | - | chr4_4:56768755-56768774 | None:intergenic | 35.0% | |
| GATCTAAACAGACTTCTAAG+AGG | + | chr4_4:56768764-56768783 | Msa0689610:CDS | 35.0% | |
| TTCAGTTCATATGTACTCAC+TGG | - | chr4_4:56768793-56768812 | None:intergenic | 35.0% | |
| AGGAAAGAATATGCAAGGAT+TGG | + | chr4_4:56768904-56768923 | Msa0689610:CDS | 35.0% | |
| GGAAAGAATATGCAAGGATT+GGG | + | chr4_4:56768905-56768924 | Msa0689610:CDS | 35.0% | |
| GAAAGAATATGCAAGGATTG+GGG | + | chr4_4:56768906-56768925 | Msa0689610:CDS | 35.0% | |
| GCAATGCTAACTCAATCAAA+TGG | + | chr4_4:56768944-56768963 | Msa0689610:CDS | 35.0% | |
| !! | ATAAATGATTCGGTGCTGTT+TGG | + | chr4_4:56769052-56769071 | Msa0689610:intron | 35.0% |
| AGATTGTTTGGAAGAGCTTA+TGG | - | chr4_4:56769202-56769221 | None:intergenic | 35.0% | |
| ! | AGGGCTGCATTAAATTTTGA+AGG | + | chr4_4:56769304-56769323 | Msa0689610:intron | 35.0% |
| ! | AATTCTTTTGAACTCGGATC+AGG | - | chr4_4:56769400-56769419 | None:intergenic | 35.0% |
| CGAGTTCAAAAGAATTTGAG+TGG | + | chr4_4:56769404-56769423 | Msa0689610:CDS | 35.0% | |
| ATTGAATATGCAAACTGGAG+AGG | + | chr4_4:56769450-56769469 | Msa0689610:CDS | 35.0% | |
| GTTAAGGAGAAAGATCTTTG+TGG | + | chr4_4:56769472-56769491 | Msa0689610:CDS | 35.0% | |
| TGGTGACAAACCAGTTTATA+TGG | + | chr4_4:56769492-56769511 | Msa0689610:CDS | 35.0% | |
| GAGAAAAAGACGAACCTATA+AGG | + | chr4_4:56769899-56769918 | Msa0689610:CDS | 35.0% | |
| AAAAGACGAACCTATAAGGA+TGG | + | chr4_4:56769903-56769922 | Msa0689610:CDS | 35.0% | |
| GATACTAACACATCTCAAGT+AGG | + | chr4_4:56770036-56770055 | Msa0689610:intron | 35.0% | |
| !! | TCTGCAAGGCATTTCAATTT+TGG | - | chr4_4:56770187-56770206 | None:intergenic | 35.0% |
| ! | TGGTCTCTTGTTTAACTGCT+CGG | - | chr4_4:56766343-56766362 | None:intergenic | 40.0% |
| TCAATTTGCAACGAGACTTC+AGG | - | chr4_4:56766372-56766391 | None:intergenic | 40.0% | |
| TATACCTTAGATGGAAGCAG+TGG | - | chr4_4:56766474-56766493 | None:intergenic | 40.0% | |
| TACTCTACAGCACATTGAAC+AGG | - | chr4_4:56766551-56766570 | None:intergenic | 40.0% | |
| ATGGATGCAAGTCACAAGTA+TGG | - | chr4_4:56766604-56766623 | None:intergenic | 40.0% | |
| ! | ATACTTGTGACTTGCATCCA+TGG | + | chr4_4:56766603-56766622 | Msa0689610:CDS | 40.0% |
| ! | ACACCCTCTGGAAAATCATT+AGG | - | chr4_4:56766636-56766655 | None:intergenic | 40.0% |
| TTTCTAATGTAGACACCCTC+TGG | - | chr4_4:56766648-56766667 | None:intergenic | 40.0% | |
| !! | GAGGGTGTCTACATTAGAAA+TGG | + | chr4_4:56766648-56766667 | Msa0689610:CDS | 40.0% |
| CAACACAAACGCATGATACT+TGG | + | chr4_4:56766911-56766930 | Msa0689610:intron | 40.0% | |
| ! | TTTTAGCCGGTCAACTTAGA+TGG | + | chr4_4:56766943-56766962 | Msa0689610:intron | 40.0% |
| ! | ACAGATCCATCTAAGTTGAC+CGG | - | chr4_4:56766952-56766971 | None:intergenic | 40.0% |
| ACTGTCCGATCTCAAATCAA+TGG | - | chr4_4:56767009-56767028 | None:intergenic | 40.0% | |
| CCAATCGAAATAAACGATCG+AGG | - | chr4_4:56767067-56767086 | None:intergenic | 40.0% | |
| CCTCGATCGTTTATTTCGAT+TGG | + | chr4_4:56767064-56767083 | Msa0689610:intron | 40.0% | |
| CATTGGAGGAAAATGCTAGA+GGG | - | chr4_4:56767223-56767242 | None:intergenic | 40.0% | |
| TTGAGTCCTACAGTTCAGAT+TGG | + | chr4_4:56767250-56767269 | Msa0689610:intron | 40.0% | |
| TGAGTCCTACAGTTCAGATT+GGG | + | chr4_4:56767251-56767270 | Msa0689610:intron | 40.0% | |
| !! | GAAACCTAGTTCTATGGTTC+TGG | - | chr4_4:56767323-56767342 | None:intergenic | 40.0% |
| ! | AGTCCTCCAAAAAGTGGATT+TGG | - | chr4_4:56767444-56767463 | None:intergenic | 40.0% |
| GATTTCAGTCCTCCAAAAAG+TGG | - | chr4_4:56767450-56767469 | None:intergenic | 40.0% | |
| TAGGTCAAGTCATATTTGGG+TGG | + | chr4_4:56767488-56767507 | Msa0689610:CDS | 40.0% | |
| TCAAGTCATATTTGGGTGGA+AGG | + | chr4_4:56767492-56767511 | Msa0689610:CDS | 40.0% | |
| !! | CAACGTGCTTGTTGTTATAG+AGG | - | chr4_4:56767575-56767594 | None:intergenic | 40.0% |
| TGTCTGCTTATCTCTTCAAC+TGG | + | chr4_4:56767676-56767695 | Msa0689610:CDS | 40.0% | |
| GTCTGCTTATCTCTTCAACT+GGG | + | chr4_4:56767677-56767696 | Msa0689610:CDS | 40.0% | |
| TCCTCAATTATAAGAGTCGG+CGG | + | chr4_4:56767796-56767815 | Msa0689610:intron | 40.0% | |
| TGGACTTAACAGTTGAGATC+TGG | + | chr4_4:56767922-56767941 | Msa0689610:intron | 40.0% | |
| ACCAATGTGTTTGAGCATTC+AGG | + | chr4_4:56767970-56767989 | Msa0689610:CDS | 40.0% | |
| TCCTGAATGCTCAAACACAT+TGG | - | chr4_4:56767974-56767993 | None:intergenic | 40.0% | |
| CAAAAAAACCTTTGGATGGC+TGG | - | chr4_4:56768103-56768122 | None:intergenic | 40.0% | |
| !!! | CAGCCATCCAAAGGTTTTTT+TGG | + | chr4_4:56768101-56768120 | Msa0689610:intron | 40.0% |
| TCACAGAAAGCTCCAATTAC+AGG | + | chr4_4:56768215-56768234 | Msa0689610:intron | 40.0% | |
| CACAGAAAGCTCCAATTACA+GGG | + | chr4_4:56768216-56768235 | Msa0689610:intron | 40.0% | |
| ACAGAAAGCTCCAATTACAG+GGG | + | chr4_4:56768217-56768236 | Msa0689610:intron | 40.0% | |
| ! | ACCAGTTAAACCTTTTGCTG+TGG | + | chr4_4:56768262-56768281 | Msa0689610:CDS | 40.0% |
| ACCACAGCAAAAGGTTTAAC+TGG | - | chr4_4:56768266-56768285 | None:intergenic | 40.0% | |
| !! | GTTAAACCTTTTGCTGTGGT+TGG | + | chr4_4:56768266-56768285 | Msa0689610:CDS | 40.0% |
| GCTGTGGTTGGAATTATTTC+TGG | + | chr4_4:56768278-56768297 | Msa0689610:CDS | 40.0% | |
| TTCAGCCGATGGAAAGAAAT+TGG | + | chr4_4:56768384-56768403 | Msa0689610:intron | 40.0% | |
| TGTAGTCTTTGCCATGACAT+AGG | + | chr4_4:56768436-56768455 | Msa0689610:CDS | 40.0% | |
| TTGCAGGTACAATGTGATCA+TGG | + | chr4_4:56768724-56768743 | Msa0689610:intron | 40.0% | |
| ! | CTAAACAGACTTCTAAGAGG+AGG | + | chr4_4:56768767-56768786 | Msa0689610:CDS | 40.0% |
| CTCAATCAAATGGTTTGAGG+TGG | + | chr4_4:56768954-56768973 | Msa0689610:CDS | 40.0% | |
| !! | TTCTTTTGAGGATGGAGATG+AGG | + | chr4_4:56769005-56769024 | Msa0689610:CDS | 40.0% |
| ! | TGAAGGCATGTCTAATTGTG+TGG | + | chr4_4:56769321-56769340 | Msa0689610:intron | 40.0% |
| GTCTAATTGTGTGGATCAAC+AGG | + | chr4_4:56769330-56769349 | Msa0689610:intron | 40.0% | |
| TGGCGATTGAATATGCAAAC+TGG | + | chr4_4:56769445-56769464 | Msa0689610:CDS | 40.0% | |
| TATGCAAACTGGAGAGGTTA+AGG | + | chr4_4:56769456-56769475 | Msa0689610:CDS | 40.0% | |
| ACCTTCATCTCTAGGCATAA+AGG | - | chr4_4:56769971-56769990 | None:intergenic | 40.0% | |
| AGAGTTCCATATGGGTTTCA+TGG | + | chr4_4:56770204-56770223 | Msa0689610:CDS | 40.0% | |
| ! | TGGTCTCTTGTTTAACTGCT+CGG | - | chr4_4:56766343-56766362 | None:intergenic | 40.0% |
| TCAATTTGCAACGAGACTTC+AGG | - | chr4_4:56766372-56766391 | None:intergenic | 40.0% | |
| TATACCTTAGATGGAAGCAG+TGG | - | chr4_4:56766474-56766493 | None:intergenic | 40.0% | |
| TACTCTACAGCACATTGAAC+AGG | - | chr4_4:56766551-56766570 | None:intergenic | 40.0% | |
| ATGGATGCAAGTCACAAGTA+TGG | - | chr4_4:56766604-56766623 | None:intergenic | 40.0% | |
| ! | ATACTTGTGACTTGCATCCA+TGG | + | chr4_4:56766603-56766622 | Msa0689610:CDS | 40.0% |
| ! | ACACCCTCTGGAAAATCATT+AGG | - | chr4_4:56766636-56766655 | None:intergenic | 40.0% |
| TTTCTAATGTAGACACCCTC+TGG | - | chr4_4:56766648-56766667 | None:intergenic | 40.0% | |
| !! | GAGGGTGTCTACATTAGAAA+TGG | + | chr4_4:56766648-56766667 | Msa0689610:CDS | 40.0% |
| CAACACAAACGCATGATACT+TGG | + | chr4_4:56766911-56766930 | Msa0689610:intron | 40.0% | |
| ! | TTTTAGCCGGTCAACTTAGA+TGG | + | chr4_4:56766943-56766962 | Msa0689610:intron | 40.0% |
| ! | ACAGATCCATCTAAGTTGAC+CGG | - | chr4_4:56766952-56766971 | None:intergenic | 40.0% |
| ACTGTCCGATCTCAAATCAA+TGG | - | chr4_4:56767009-56767028 | None:intergenic | 40.0% | |
| CCAATCGAAATAAACGATCG+AGG | - | chr4_4:56767067-56767086 | None:intergenic | 40.0% | |
| CCTCGATCGTTTATTTCGAT+TGG | + | chr4_4:56767064-56767083 | Msa0689610:intron | 40.0% | |
| CATTGGAGGAAAATGCTAGA+GGG | - | chr4_4:56767223-56767242 | None:intergenic | 40.0% | |
| TTGAGTCCTACAGTTCAGAT+TGG | + | chr4_4:56767250-56767269 | Msa0689610:intron | 40.0% | |
| TGAGTCCTACAGTTCAGATT+GGG | + | chr4_4:56767251-56767270 | Msa0689610:intron | 40.0% | |
| !! | GAAACCTAGTTCTATGGTTC+TGG | - | chr4_4:56767323-56767342 | None:intergenic | 40.0% |
| ! | AGTCCTCCAAAAAGTGGATT+TGG | - | chr4_4:56767444-56767463 | None:intergenic | 40.0% |
| GATTTCAGTCCTCCAAAAAG+TGG | - | chr4_4:56767450-56767469 | None:intergenic | 40.0% | |
| TAGGTCAAGTCATATTTGGG+TGG | + | chr4_4:56767488-56767507 | Msa0689610:CDS | 40.0% | |
| TCAAGTCATATTTGGGTGGA+AGG | + | chr4_4:56767492-56767511 | Msa0689610:CDS | 40.0% | |
| !! | CAACGTGCTTGTTGTTATAG+AGG | - | chr4_4:56767575-56767594 | None:intergenic | 40.0% |
| TGTCTGCTTATCTCTTCAAC+TGG | + | chr4_4:56767676-56767695 | Msa0689610:CDS | 40.0% | |
| GTCTGCTTATCTCTTCAACT+GGG | + | chr4_4:56767677-56767696 | Msa0689610:CDS | 40.0% | |
| TCCTCAATTATAAGAGTCGG+CGG | + | chr4_4:56767796-56767815 | Msa0689610:intron | 40.0% | |
| TGGACTTAACAGTTGAGATC+TGG | + | chr4_4:56767922-56767941 | Msa0689610:intron | 40.0% | |
| ACCAATGTGTTTGAGCATTC+AGG | + | chr4_4:56767970-56767989 | Msa0689610:CDS | 40.0% | |
| TCCTGAATGCTCAAACACAT+TGG | - | chr4_4:56767974-56767993 | None:intergenic | 40.0% | |
| CAAAAAAACCTTTGGATGGC+TGG | - | chr4_4:56768103-56768122 | None:intergenic | 40.0% | |
| !!! | CAGCCATCCAAAGGTTTTTT+TGG | + | chr4_4:56768101-56768120 | Msa0689610:intron | 40.0% |
| TCACAGAAAGCTCCAATTAC+AGG | + | chr4_4:56768215-56768234 | Msa0689610:intron | 40.0% | |
| CACAGAAAGCTCCAATTACA+GGG | + | chr4_4:56768216-56768235 | Msa0689610:intron | 40.0% | |
| ACAGAAAGCTCCAATTACAG+GGG | + | chr4_4:56768217-56768236 | Msa0689610:intron | 40.0% | |
| ! | ACCAGTTAAACCTTTTGCTG+TGG | + | chr4_4:56768262-56768281 | Msa0689610:CDS | 40.0% |
| ACCACAGCAAAAGGTTTAAC+TGG | - | chr4_4:56768266-56768285 | None:intergenic | 40.0% | |
| !! | GTTAAACCTTTTGCTGTGGT+TGG | + | chr4_4:56768266-56768285 | Msa0689610:CDS | 40.0% |
| GCTGTGGTTGGAATTATTTC+TGG | + | chr4_4:56768278-56768297 | Msa0689610:CDS | 40.0% | |
| TTCAGCCGATGGAAAGAAAT+TGG | + | chr4_4:56768384-56768403 | Msa0689610:intron | 40.0% | |
| TGTAGTCTTTGCCATGACAT+AGG | + | chr4_4:56768436-56768455 | Msa0689610:CDS | 40.0% | |
| TTGCAGGTACAATGTGATCA+TGG | + | chr4_4:56768724-56768743 | Msa0689610:intron | 40.0% | |
| ! | CTAAACAGACTTCTAAGAGG+AGG | + | chr4_4:56768767-56768786 | Msa0689610:CDS | 40.0% |
| CTCAATCAAATGGTTTGAGG+TGG | + | chr4_4:56768954-56768973 | Msa0689610:CDS | 40.0% | |
| !! | TTCTTTTGAGGATGGAGATG+AGG | + | chr4_4:56769005-56769024 | Msa0689610:CDS | 40.0% |
| ! | TGAAGGCATGTCTAATTGTG+TGG | + | chr4_4:56769321-56769340 | Msa0689610:intron | 40.0% |
| GTCTAATTGTGTGGATCAAC+AGG | + | chr4_4:56769330-56769349 | Msa0689610:intron | 40.0% | |
| TGGCGATTGAATATGCAAAC+TGG | + | chr4_4:56769445-56769464 | Msa0689610:CDS | 40.0% | |
| TATGCAAACTGGAGAGGTTA+AGG | + | chr4_4:56769456-56769475 | Msa0689610:CDS | 40.0% | |
| ACCTTCATCTCTAGGCATAA+AGG | - | chr4_4:56769971-56769990 | None:intergenic | 40.0% | |
| AGAGTTCCATATGGGTTTCA+TGG | + | chr4_4:56770204-56770223 | Msa0689610:CDS | 40.0% | |
| AACGAGACTTCAGGTAGAGT+TGG | - | chr4_4:56766363-56766382 | None:intergenic | 45.0% | |
| GTAGAGTAACTTTGCTCCTG+TGG | + | chr4_4:56766563-56766582 | Msa0689610:intron | 45.0% | |
| TGCGATAAACTCCATTCCCT+AGG | + | chr4_4:56766815-56766834 | Msa0689610:intron | 45.0% | |
| GCATTGGAGGAAAATGCTAG+AGG | - | chr4_4:56767224-56767243 | None:intergenic | 45.0% | |
| GAGTCCTACAGTTCAGATTG+GGG | + | chr4_4:56767252-56767271 | Msa0689610:intron | 45.0% | |
| !! | CTAGTTCTATGGTTCTGGGA+GGG | - | chr4_4:56767318-56767337 | None:intergenic | 45.0% |
| !! | GCAGGACCAAATCCACTTTT+TGG | + | chr4_4:56767435-56767454 | Msa0689610:intron | 45.0% |
| !!! | GGACCAAATCCACTTTTTGG+AGG | + | chr4_4:56767438-56767457 | Msa0689610:intron | 45.0% |
| CATATTTGGGTGGAAGGAGA+AGG | + | chr4_4:56767498-56767517 | Msa0689610:CDS | 45.0% | |
| TCTATGGCAGGCAGAAACAA+TGG | - | chr4_4:56767636-56767655 | None:intergenic | 45.0% | |
| !! | TTGTTTCTGCCTGCCATAGA+AGG | + | chr4_4:56767636-56767655 | Msa0689610:CDS | 45.0% |
| AGTGAATTGCCTTCTATGGC+AGG | - | chr4_4:56767648-56767667 | None:intergenic | 45.0% | |
| !! | ACCGCCGACTCTTATAATTG+AGG | - | chr4_4:56767800-56767819 | None:intergenic | 45.0% |
| TGATGTCGGTCCCTTAAAGA+CGG | + | chr4_4:56767871-56767890 | Msa0689610:intron | 45.0% | |
| ! | ACCTTTTACCAGCCATCCAA+AGG | + | chr4_4:56768092-56768111 | Msa0689610:CDS | 45.0% |
| ACCTTTGGATGGCTGGTAAA+AGG | - | chr4_4:56768096-56768115 | None:intergenic | 45.0% | |
| GTAACTAGCTCCCCTGTAAT+TGG | - | chr4_4:56768230-56768249 | None:intergenic | 45.0% | |
| ACAGGGGAGCTAGTTACATT+AGG | + | chr4_4:56768233-56768252 | Msa0689610:CDS | 45.0% | |
| GGAGCTAGTTACATTAGGTG+TGG | + | chr4_4:56768238-56768257 | Msa0689610:CDS | 45.0% | |
| ! | AACTAGTTTGTAGGGCGAGA+AGG | + | chr4_4:56768539-56768558 | Msa0689610:intron | 45.0% |
| TGGATCAACAGGTTGTAGTG+AGG | + | chr4_4:56769341-56769360 | Msa0689610:intron | 45.0% | |
| GGATCAACAGGTTGTAGTGA+GGG | + | chr4_4:56769342-56769361 | Msa0689610:intron | 45.0% | |
| GATCAACAGGTTGTAGTGAG+GGG | + | chr4_4:56769343-56769362 | Msa0689610:intron | 45.0% | |
| CGGATCAGGTTCAGGAATTA+AGG | - | chr4_4:56769386-56769405 | None:intergenic | 45.0% | |
| TTTGAACTCGGATCAGGTTC+AGG | - | chr4_4:56769394-56769413 | None:intergenic | 45.0% | |
| GGTTATCTCGTTGTCACGAA+TGG | + | chr4_4:56769425-56769444 | Msa0689610:CDS | 45.0% | |
| TGAGTGGTAGAGCTTGCAAT+AGG | - | chr4_4:56769586-56769605 | None:intergenic | 45.0% | |
| ATTGCAAGCTCTACCACTCA+AGG | + | chr4_4:56769586-56769605 | Msa0689610:CDS | 45.0% | |
| GCCTTTATGCCTAGAGATGA+AGG | + | chr4_4:56769967-56769986 | Msa0689610:CDS | 45.0% | |
| TCTTCGACACCTTCATCTCT+AGG | - | chr4_4:56769979-56769998 | None:intergenic | 45.0% | |
| !! | GAAGGTGTCGAAGAAGATGA+TGG | + | chr4_4:56769985-56770004 | Msa0689610:CDS | 45.0% |
| ! | GTGTCGAAGAAGATGATGGT+TGG | + | chr4_4:56769989-56770008 | Msa0689610:CDS | 45.0% |
| ATGCCTTGCAGAGTTCCATA+TGG | + | chr4_4:56770195-56770214 | Msa0689610:CDS | 45.0% | |
| TGCCTTGCAGAGTTCCATAT+GGG | + | chr4_4:56770196-56770215 | Msa0689610:CDS | 45.0% | |
| AACCCATATGGAACTCTGCA+AGG | - | chr4_4:56770201-56770220 | None:intergenic | 45.0% | |
| AAGGCTCCATGAAACCCATA+TGG | - | chr4_4:56770213-56770232 | None:intergenic | 45.0% | |
| CTGGAATGAGATTGGCATGA+AGG | - | chr4_4:56770232-56770251 | None:intergenic | 45.0% | |
| CTTCATGCCAATCTCATTCC+AGG | + | chr4_4:56770230-56770249 | Msa0689610:CDS | 45.0% | |
| AACGAGACTTCAGGTAGAGT+TGG | - | chr4_4:56766363-56766382 | None:intergenic | 45.0% | |
| GTAGAGTAACTTTGCTCCTG+TGG | + | chr4_4:56766563-56766582 | Msa0689610:intron | 45.0% | |
| TGCGATAAACTCCATTCCCT+AGG | + | chr4_4:56766815-56766834 | Msa0689610:intron | 45.0% | |
| GCATTGGAGGAAAATGCTAG+AGG | - | chr4_4:56767224-56767243 | None:intergenic | 45.0% | |
| GAGTCCTACAGTTCAGATTG+GGG | + | chr4_4:56767252-56767271 | Msa0689610:intron | 45.0% | |
| !! | CTAGTTCTATGGTTCTGGGA+GGG | - | chr4_4:56767318-56767337 | None:intergenic | 45.0% |
| !! | GCAGGACCAAATCCACTTTT+TGG | + | chr4_4:56767435-56767454 | Msa0689610:intron | 45.0% |
| !!! | GGACCAAATCCACTTTTTGG+AGG | + | chr4_4:56767438-56767457 | Msa0689610:intron | 45.0% |
| CATATTTGGGTGGAAGGAGA+AGG | + | chr4_4:56767498-56767517 | Msa0689610:CDS | 45.0% | |
| TCTATGGCAGGCAGAAACAA+TGG | - | chr4_4:56767636-56767655 | None:intergenic | 45.0% | |
| !! | TTGTTTCTGCCTGCCATAGA+AGG | + | chr4_4:56767636-56767655 | Msa0689610:CDS | 45.0% |
| AGTGAATTGCCTTCTATGGC+AGG | - | chr4_4:56767648-56767667 | None:intergenic | 45.0% | |
| !! | ACCGCCGACTCTTATAATTG+AGG | - | chr4_4:56767800-56767819 | None:intergenic | 45.0% |
| TGATGTCGGTCCCTTAAAGA+CGG | + | chr4_4:56767871-56767890 | Msa0689610:intron | 45.0% | |
| ! | ACCTTTTACCAGCCATCCAA+AGG | + | chr4_4:56768092-56768111 | Msa0689610:CDS | 45.0% |
| ACCTTTGGATGGCTGGTAAA+AGG | - | chr4_4:56768096-56768115 | None:intergenic | 45.0% | |
| GTAACTAGCTCCCCTGTAAT+TGG | - | chr4_4:56768230-56768249 | None:intergenic | 45.0% | |
| ACAGGGGAGCTAGTTACATT+AGG | + | chr4_4:56768233-56768252 | Msa0689610:CDS | 45.0% | |
| GGAGCTAGTTACATTAGGTG+TGG | + | chr4_4:56768238-56768257 | Msa0689610:CDS | 45.0% | |
| ! | AACTAGTTTGTAGGGCGAGA+AGG | + | chr4_4:56768539-56768558 | Msa0689610:intron | 45.0% |
| TGGATCAACAGGTTGTAGTG+AGG | + | chr4_4:56769341-56769360 | Msa0689610:intron | 45.0% | |
| GGATCAACAGGTTGTAGTGA+GGG | + | chr4_4:56769342-56769361 | Msa0689610:intron | 45.0% | |
| GATCAACAGGTTGTAGTGAG+GGG | + | chr4_4:56769343-56769362 | Msa0689610:intron | 45.0% | |
| CGGATCAGGTTCAGGAATTA+AGG | - | chr4_4:56769386-56769405 | None:intergenic | 45.0% | |
| TTTGAACTCGGATCAGGTTC+AGG | - | chr4_4:56769394-56769413 | None:intergenic | 45.0% | |
| GGTTATCTCGTTGTCACGAA+TGG | + | chr4_4:56769425-56769444 | Msa0689610:CDS | 45.0% | |
| TGAGTGGTAGAGCTTGCAAT+AGG | - | chr4_4:56769586-56769605 | None:intergenic | 45.0% | |
| ATTGCAAGCTCTACCACTCA+AGG | + | chr4_4:56769586-56769605 | Msa0689610:CDS | 45.0% | |
| GCCTTTATGCCTAGAGATGA+AGG | + | chr4_4:56769967-56769986 | Msa0689610:CDS | 45.0% | |
| TCTTCGACACCTTCATCTCT+AGG | - | chr4_4:56769979-56769998 | None:intergenic | 45.0% | |
| !! | GAAGGTGTCGAAGAAGATGA+TGG | + | chr4_4:56769985-56770004 | Msa0689610:CDS | 45.0% |
| ! | GTGTCGAAGAAGATGATGGT+TGG | + | chr4_4:56769989-56770008 | Msa0689610:CDS | 45.0% |
| ATGCCTTGCAGAGTTCCATA+TGG | + | chr4_4:56770195-56770214 | Msa0689610:CDS | 45.0% | |
| TGCCTTGCAGAGTTCCATAT+GGG | + | chr4_4:56770196-56770215 | Msa0689610:CDS | 45.0% | |
| AACCCATATGGAACTCTGCA+AGG | - | chr4_4:56770201-56770220 | None:intergenic | 45.0% | |
| AAGGCTCCATGAAACCCATA+TGG | - | chr4_4:56770213-56770232 | None:intergenic | 45.0% | |
| CTGGAATGAGATTGGCATGA+AGG | - | chr4_4:56770232-56770251 | None:intergenic | 45.0% | |
| CTTCATGCCAATCTCATTCC+AGG | + | chr4_4:56770230-56770249 | Msa0689610:CDS | 45.0% | |
| !! | CTATATAAATATTTATAATA+TGG | + | chr4_4:56769680-56769699 | Msa0689610:intron | 5.0% |
| !! | CTATATAAATATTTATAATA+TGG | + | chr4_4:56769680-56769699 | Msa0689610:intron | 5.0% |
| CAAGCCACTGCTTCCATCTA+AGG | + | chr4_4:56766467-56766486 | Msa0689610:CDS | 50.0% | |
| CTTTGCTCCTGTGGAAGAGT+TGG | + | chr4_4:56766572-56766591 | Msa0689610:CDS | 50.0% | |
| TTCTCTCGTGTCCTAGGGAA+TGG | - | chr4_4:56766829-56766848 | None:intergenic | 50.0% | |
| ATTCCCTAGGACACGAGAGA+AGG | + | chr4_4:56766828-56766847 | Msa0689610:intron | 50.0% | |
| GTTCCTTCTCTCGTGTCCTA+GGG | - | chr4_4:56766834-56766853 | None:intergenic | 50.0% | |
| AGTTCCTTCTCTCGTGTCCT+AGG | - | chr4_4:56766835-56766854 | None:intergenic | 50.0% | |
| GGTTCCCCAATCTGAACTGT+AGG | - | chr4_4:56767259-56767278 | None:intergenic | 50.0% | |
| !! | CCTAGTTCTATGGTTCTGGG+AGG | - | chr4_4:56767319-56767338 | None:intergenic | 50.0% |
| CCTCCCAGAACCATAGAACT+AGG | + | chr4_4:56767316-56767335 | Msa0689610:intron | 50.0% | |
| GGCGAGTGAATTGCCTTCTA+TGG | - | chr4_4:56767652-56767671 | None:intergenic | 50.0% | |
| ATTGGGAACTCAGTGCAGCT+TGG | + | chr4_4:56768064-56768083 | Msa0689610:CDS | 50.0% | |
| ATTGGGGTAATGCCACGCTA+TGG | + | chr4_4:56768922-56768941 | Msa0689610:CDS | 50.0% | |
| GAGTTAGCATTGCCATAGCG+TGG | - | chr4_4:56768937-56768956 | None:intergenic | 50.0% | |
| CAAGCCACTGCTTCCATCTA+AGG | + | chr4_4:56766467-56766486 | Msa0689610:CDS | 50.0% | |
| CTTTGCTCCTGTGGAAGAGT+TGG | + | chr4_4:56766572-56766591 | Msa0689610:CDS | 50.0% | |
| TTCTCTCGTGTCCTAGGGAA+TGG | - | chr4_4:56766829-56766848 | None:intergenic | 50.0% | |
| ATTCCCTAGGACACGAGAGA+AGG | + | chr4_4:56766828-56766847 | Msa0689610:intron | 50.0% | |
| GTTCCTTCTCTCGTGTCCTA+GGG | - | chr4_4:56766834-56766853 | None:intergenic | 50.0% | |
| AGTTCCTTCTCTCGTGTCCT+AGG | - | chr4_4:56766835-56766854 | None:intergenic | 50.0% | |
| GGTTCCCCAATCTGAACTGT+AGG | - | chr4_4:56767259-56767278 | None:intergenic | 50.0% | |
| !! | CCTAGTTCTATGGTTCTGGG+AGG | - | chr4_4:56767319-56767338 | None:intergenic | 50.0% |
| CCTCCCAGAACCATAGAACT+AGG | + | chr4_4:56767316-56767335 | Msa0689610:intron | 50.0% | |
| GGCGAGTGAATTGCCTTCTA+TGG | - | chr4_4:56767652-56767671 | None:intergenic | 50.0% | |
| ATTGGGAACTCAGTGCAGCT+TGG | + | chr4_4:56768064-56768083 | Msa0689610:CDS | 50.0% | |
| ATTGGGGTAATGCCACGCTA+TGG | + | chr4_4:56768922-56768941 | Msa0689610:CDS | 50.0% | |
| GAGTTAGCATTGCCATAGCG+TGG | - | chr4_4:56768937-56768956 | None:intergenic | 50.0% | |
| TGCTCCTGTGGAAGAGTTGG+AGG | + | chr4_4:56766575-56766594 | Msa0689610:CDS | 55.0% | |
| GCTTCCTCCAACTCTTCCAC+AGG | - | chr4_4:56766582-56766601 | None:intergenic | 55.0% | |
| TGCTCCTGTGGAAGAGTTGG+AGG | + | chr4_4:56766575-56766594 | Msa0689610:CDS | 55.0% | |
| GCTTCCTCCAACTCTTCCAC+AGG | - | chr4_4:56766582-56766601 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 56766168 | 56770263 | 56766168 | ID=Msa0689610;Name=Msa0689610 |
| chr4_4 | mRNA | 56766168 | 56770263 | 56766168 | ID=Msa0689610-mRNA-1;Parent=Msa0689610;Name=Msa0689610-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.08|0|1|1|1|13|0|583 |
| chr4_4 | exon | 56766168 | 56766266 | 56766168 | ID=Msa0689610-mRNA-1:exon:15037;Parent=Msa0689610-mRNA-1 |
| chr4_4 | exon | 56766348 | 56766488 | 56766348 | ID=Msa0689610-mRNA-1:exon:15038;Parent=Msa0689610-mRNA-1 |
| chr4_4 | exon | 56766567 | 56766669 | 56766567 | ID=Msa0689610-mRNA-1:exon:15039;Parent=Msa0689610-mRNA-1 |
| chr4_4 | exon | 56767439 | 56767698 | 56767439 | ID=Msa0689610-mRNA-1:exon:15040;Parent=Msa0689610-mRNA-1 |
| chr4_4 | exon | 56767934 | 56768113 | 56767934 | ID=Msa0689610-mRNA-1:exon:15041;Parent=Msa0689610-mRNA-1 |
| chr4_4 | exon | 56768221 | 56768299 | 56768221 | ID=Msa0689610-mRNA-1:exon:15042;Parent=Msa0689610-mRNA-1 |
| chr4_4 | exon | 56768389 | 56768470 | 56768389 | ID=Msa0689610-mRNA-1:exon:15043;Parent=Msa0689610-mRNA-1 |
| chr4_4 | exon | 56768730 | 56768792 | 56768730 | ID=Msa0689610-mRNA-1:exon:15044;Parent=Msa0689610-mRNA-1 |
| chr4_4 | exon | 56768888 | 56769026 | 56768888 | ID=Msa0689610-mRNA-1:exon:15045;Parent=Msa0689610-mRNA-1 |
| chr4_4 | exon | 56769352 | 56769607 | 56769352 | ID=Msa0689610-mRNA-1:exon:15046;Parent=Msa0689610-mRNA-1 |
| chr4_4 | exon | 56769724 | 56769794 | 56769724 | ID=Msa0689610-mRNA-1:exon:15047;Parent=Msa0689610-mRNA-1 |
| chr4_4 | exon | 56769898 | 56770053 | 56769898 | ID=Msa0689610-mRNA-1:exon:15048;Parent=Msa0689610-mRNA-1 |
| chr4_4 | exon | 56770141 | 56770263 | 56770141 | ID=Msa0689610-mRNA-1:exon:15049;Parent=Msa0689610-mRNA-1 |
| chr4_4 | CDS | 56766168 | 56766266 | 56766168 | ID=Msa0689610-mRNA-1:cds;Parent=Msa0689610-mRNA-1 |
| chr4_4 | CDS | 56766348 | 56766488 | 56766348 | ID=Msa0689610-mRNA-1:cds;Parent=Msa0689610-mRNA-1 |
| chr4_4 | CDS | 56766567 | 56766669 | 56766567 | ID=Msa0689610-mRNA-1:cds;Parent=Msa0689610-mRNA-1 |
| chr4_4 | CDS | 56767439 | 56767698 | 56767439 | ID=Msa0689610-mRNA-1:cds;Parent=Msa0689610-mRNA-1 |
| chr4_4 | CDS | 56767934 | 56768113 | 56767934 | ID=Msa0689610-mRNA-1:cds;Parent=Msa0689610-mRNA-1 |
| chr4_4 | CDS | 56768221 | 56768299 | 56768221 | ID=Msa0689610-mRNA-1:cds;Parent=Msa0689610-mRNA-1 |
| chr4_4 | CDS | 56768389 | 56768470 | 56768389 | ID=Msa0689610-mRNA-1:cds;Parent=Msa0689610-mRNA-1 |
| chr4_4 | CDS | 56768730 | 56768792 | 56768730 | ID=Msa0689610-mRNA-1:cds;Parent=Msa0689610-mRNA-1 |
| chr4_4 | CDS | 56768888 | 56769026 | 56768888 | ID=Msa0689610-mRNA-1:cds;Parent=Msa0689610-mRNA-1 |
| chr4_4 | CDS | 56769352 | 56769607 | 56769352 | ID=Msa0689610-mRNA-1:cds;Parent=Msa0689610-mRNA-1 |
| chr4_4 | CDS | 56769724 | 56769794 | 56769724 | ID=Msa0689610-mRNA-1:cds;Parent=Msa0689610-mRNA-1 |
| chr4_4 | CDS | 56769898 | 56770053 | 56769898 | ID=Msa0689610-mRNA-1:cds;Parent=Msa0689610-mRNA-1 |
| chr4_4 | CDS | 56770141 | 56770263 | 56770141 | ID=Msa0689610-mRNA-1:cds;Parent=Msa0689610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
