Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0693030 | XP_013456788.1 | 95.031 | 644 | 17 | 2 | 1 | 629 | 1 | 644 | 0.0 | 1231 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0693030 | sp|Q9FM96|PSL4_ARATH | 57.188 | 633 | 234 | 13 | 21 | 629 | 28 | 647 | 0.0 | 617 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0693030 | A0A072UM12 | 95.031 | 644 | 17 | 2 | 1 | 629 | 1 | 644 | 0.0 | 1231 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0693030 | Msa1400850 | 0.943120 | 2.130069e-102 | -8.615850e-47 |
| Msa0276860 | Msa0693030 | 0.800274 | 1.556351e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0693030 | MtrunA17_Chr4g0043321 | 95.031 | 644 | 17 | 2 | 1 | 629 | 1 | 644 | 0.0 | 1231 |
| Msa0693030 | MtrunA17_Chr4g0040841 | 59.836 | 122 | 48 | 1 | 11 | 132 | 8 | 128 | 1.73e-43 | 154 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0693030 | AT5G56360.1 | 57.188 | 633 | 234 | 13 | 21 | 629 | 28 | 647 | 0.0 | 617 |
| Msa0693030 | AT2G42390.1 | 58.333 | 132 | 49 | 3 | 1 | 132 | 1 | 126 | 3.37e-45 | 160 |
Find 194 sgRNAs with CRISPR-Local
Find 573 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAACTCATCACGGCTTTC+TGG | 0.130781 | 4_4:+61837153 | None:intergenic |
| ACCCCAACCAATACCAAATT+TGG | 0.133404 | 4_4:+61836965 | None:intergenic |
| AACTCATTCTAACCAAAATT+TGG | 0.181117 | 4_4:+61836700 | None:intergenic |
| CCAGCCTCCCAGCATGTATT+TGG | 0.202598 | 4_4:+61843282 | None:intergenic |
| GAGATTCTAAAACCAAATTT+TGG | 0.212338 | 4_4:-61836712 | Msa0693030:three_prime_UTR |
| TACTAGAGCTTACCCAAATT+TGG | 0.239918 | 4_4:-61836978 | Msa0693030:three_prime_UTR |
| TGACAAAACTGGTACGAATT+TGG | 0.243728 | 4_4:-61844883 | Msa0693030:five_prime_UTR |
| GGCCATTCCACCACCCGTTT+GGG | 0.243752 | 4_4:-61838265 | Msa0693030:CDS |
| AAAGAAGAAAGTATACTTAA+AGG | 0.252920 | 4_4:-61843129 | Msa0693030:CDS |
| ATAAAGATCTCCTTTGAAAA+TGG | 0.255299 | 4_4:+61836779 | None:intergenic |
| GATTCCGAGGAATGGGTCTT+TGG | 0.265562 | 4_4:+61844625 | None:intergenic |
| TGGCAGGTATGTAGCTTTAT+TGG | 0.270461 | 4_4:-61837331 | Msa0693030:intron |
| ATTTGGTATTGGTTGGGGTT+AGG | 0.289117 | 4_4:-61836961 | Msa0693030:three_prime_UTR |
| TCCTGGCTAGCCTGTTTATA+GGG | 0.289800 | 4_4:+61838292 | None:intergenic |
| ACCCAAATTTGGTATTGGTT+GGG | 0.290054 | 4_4:-61836967 | Msa0693030:three_prime_UTR |
| ACTAGGAGCGTGTTTGGCTT+TGG | 0.297811 | 4_4:-61836927 | Msa0693030:three_prime_UTR |
| AATTCCTGTATCTTCTTCAT+TGG | 0.303497 | 4_4:+61842265 | None:intergenic |
| CTAGGAGCGTGTTTGGCTTT+GGG | 0.307074 | 4_4:-61836926 | Msa0693030:three_prime_UTR |
| GAGGAATGGGTCTTTGGGTT+TGG | 0.310876 | 4_4:+61844631 | None:intergenic |
| AAGAAGAAAGTATACTTAAA+GGG | 0.318461 | 4_4:-61843128 | Msa0693030:CDS |
| AATGAATAAAACTCCTTTGC+TGG | 0.318818 | 4_4:+61838487 | None:intergenic |
| GGGCCATTCCACCACCCGTT+TGG | 0.326302 | 4_4:-61838266 | Msa0693030:CDS |
| TTTGGTATTGGTTGGGGTTA+GGG | 0.326745 | 4_4:-61836960 | Msa0693030:three_prime_UTR |
| GCTCTAGTATACAAAACTTA+AGG | 0.330616 | 4_4:+61836992 | None:intergenic |
| CTCCTGGCTAGCCTGTTTAT+AGG | 0.335387 | 4_4:+61838291 | None:intergenic |
| CAGCCTCCCAGCATGTATTT+GGG | 0.344775 | 4_4:+61843283 | None:intergenic |
| TTTCTAATGGTGATCATTGC+TGG | 0.357080 | 4_4:-61838061 | Msa0693030:CDS |
| TCTGAAACTGATTTGACAAC+TGG | 0.358865 | 4_4:-61841452 | Msa0693030:CDS |
| CTCTAGTATACAAAACTTAA+GGG | 0.365596 | 4_4:+61836993 | None:intergenic |
| TCCTTATGTCTCATCTGGTT+TGG | 0.367667 | 4_4:-61836896 | Msa0693030:three_prime_UTR |
| GGGAGTCCTTATGTCTCATC+TGG | 0.368488 | 4_4:-61836901 | Msa0693030:three_prime_UTR |
| ATCTGTATGGAATATTATTC+AGG | 0.371491 | 4_4:-61838832 | Msa0693030:CDS |
| AGCTTACCCAAATTTGGTAT+TGG | 0.373421 | 4_4:-61836972 | Msa0693030:three_prime_UTR |
| CCTAGGACTAGGAGCGTGTT+TGG | 0.377315 | 4_4:-61836933 | Msa0693030:three_prime_UTR |
| TTACTCAGTTATTAATTGTA+AGG | 0.379705 | 4_4:+61844964 | None:intergenic |
| TATATCTTCGTCATATTTGC+CGG | 0.384323 | 4_4:+61839069 | None:intergenic |
| AAACTCAAATGAATCTTAAC+TGG | 0.386832 | 4_4:-61837129 | Msa0693030:intron |
| ATTAATAACTGAGTAATATC+AGG | 0.388048 | 4_4:-61844957 | Msa0693030:five_prime_UTR |
| CCCAAATTTGGTATTGGTTG+GGG | 0.391746 | 4_4:-61836966 | Msa0693030:three_prime_UTR |
| AGCGTGTTTGGCTTTGGGTT+GGG | 0.393248 | 4_4:-61836921 | Msa0693030:three_prime_UTR |
| ATTCCGAGGAATGGGTCTTT+GGG | 0.400938 | 4_4:+61844626 | None:intergenic |
| TTTCTTCCTGACAAAGGGCT+GGG | 0.402523 | 4_4:+61837304 | None:intergenic |
| CATACCTTCAAACTCCTATC+AGG | 0.404765 | 4_4:+61838032 | None:intergenic |
| CCAAATACATGCTGGGAGGC+TGG | 0.405666 | 4_4:-61843282 | Msa0693030:CDS |
| CTGACTGATTCACGGGTGTC+TGG | 0.405932 | 4_4:+61838796 | None:intergenic |
| CTACGCAGATACCGTATTGA+TGG | 0.406515 | 4_4:+61841406 | None:intergenic |
| AGAGGGCTCTCCGGTTGATC+AGG | 0.406967 | 4_4:-61842168 | Msa0693030:intron |
| CAAAGTCTGCCCCTATAAAC+AGG | 0.407002 | 4_4:-61838302 | Msa0693030:CDS |
| GAGCGTGTTTGGCTTTGGGT+TGG | 0.414636 | 4_4:-61836922 | Msa0693030:three_prime_UTR |
| CAAGCTAGACCTACTGAATT+CGG | 0.417093 | 4_4:-61837181 | Msa0693030:CDS |
| TTCATTGTCTAATGCAGTGT+TGG | 0.417389 | 4_4:+61839165 | None:intergenic |
| TGGTGGAATGGCCCTCCTCC+TGG | 0.417770 | 4_4:+61838275 | None:intergenic |
| AGCAATTGAACACGCACATT+TGG | 0.418179 | 4_4:-61843190 | Msa0693030:CDS |
| CCAGGTTCATCGGTGCCATC+GGG | 0.421592 | 4_4:+61844409 | None:intergenic |
| TACAATCGAACCTGATCAAC+CGG | 0.423911 | 4_4:+61842158 | None:intergenic |
| TACCAAAACCTTACCCCAAA+CGG | 0.426842 | 4_4:+61838251 | None:intergenic |
| CCCCAACCAATACCAAATTT+GGG | 0.434768 | 4_4:+61836966 | None:intergenic |
| CCCCTATAAACAGGCTAGCC+AGG | 0.438029 | 4_4:-61838293 | Msa0693030:CDS |
| CTGATCTTTGTTGAAATTAG+CGG | 0.439746 | 4_4:+61844456 | None:intergenic |
| GGCCACCCCAGCCCTTTGTC+AGG | 0.441632 | 4_4:-61837310 | Msa0693030:CDS |
| CTTGTTGCTTCACGTTGGAC+AGG | 0.441661 | 4_4:-61839217 | Msa0693030:CDS |
| AGGATCCTTGTTTGATAAAG+TGG | 0.441971 | 4_4:-61841648 | Msa0693030:CDS |
| TACCCAAATTTGGTATTGGT+TGG | 0.448904 | 4_4:-61836968 | Msa0693030:three_prime_UTR |
| GGGGTTGTGAAACAGTTAAA+AGG | 0.449128 | 4_4:-61843108 | Msa0693030:intron |
| CAGGCGCTGGGACAAATTTG+AGG | 0.449184 | 4_4:-61838105 | Msa0693030:CDS |
| ACCAGGTTCATCGGTGCCAT+CGG | 0.449789 | 4_4:+61844408 | None:intergenic |
| AATAGACAAGGCTGAGGAAA+AGG | 0.453522 | 4_4:-61842363 | Msa0693030:CDS |
| TTAAAATCACAATGACTACT+TGG | 0.454936 | 4_4:-61836830 | Msa0693030:three_prime_UTR |
| ATCTCCTTTGAAAATGGAAC+GGG | 0.456810 | 4_4:+61836785 | None:intergenic |
| GAGAGTGAACCAGACTTGTC+AGG | 0.460654 | 4_4:-61838983 | Msa0693030:intron |
| ATTGCTGGAACGGTCCTGAT+AGG | 0.460707 | 4_4:-61838046 | Msa0693030:CDS |
| AAAAGAAGAGAAACAGAAGA+AGG | 0.462480 | 4_4:-61842324 | Msa0693030:CDS |
| TTTAGAAATTGAACAAAAGA+GGG | 0.463031 | 4_4:+61844746 | None:intergenic |
| GAAGAAGGAGGCTGAGGAAA+AGG | 0.463951 | 4_4:-61842309 | Msa0693030:CDS |
| CCCGATGGCACCGATGAACC+TGG | 0.467529 | 4_4:-61844409 | Msa0693030:intron |
| TTCCTGACAAAGGGCTGGGG+TGG | 0.468881 | 4_4:+61837308 | None:intergenic |
| ACTTTCTTATAGGATGAAGC+TGG | 0.469184 | 4_4:-61841728 | Msa0693030:intron |
| ACCAAAACCTTACCCCAAAC+GGG | 0.470971 | 4_4:+61838252 | None:intergenic |
| GCGACAGAAAAGTCCCGTTA+TGG | 0.471357 | 4_4:+61844780 | None:intergenic |
| AGAAAATACAGAAATCTGTA+TGG | 0.474370 | 4_4:-61838845 | Msa0693030:CDS |
| GGGGAGCGATTCCGAGGAAT+GGG | 0.478435 | 4_4:+61844618 | None:intergenic |
| CCAAACACGCTCCTAGTCCT+AGG | 0.479154 | 4_4:+61836933 | None:intergenic |
| ACCTTACCCCAAACGGGTGG+TGG | 0.480378 | 4_4:+61838258 | None:intergenic |
| TGCATTAGACAATGAAGATC+AGG | 0.480617 | 4_4:-61839158 | Msa0693030:CDS |
| TGGGGAGCGATTCCGAGGAA+TGG | 0.481598 | 4_4:+61844617 | None:intergenic |
| ACCCCAAACGGGTGGTGGAA+TGG | 0.481723 | 4_4:+61838263 | None:intergenic |
| TGAGAAAATTGAAGTTAAAG+AGG | 0.483030 | 4_4:-61842186 | Msa0693030:CDS |
| TATAACAAACCTGACAAGTC+TGG | 0.483214 | 4_4:+61838974 | None:intergenic |
| AAAACCAATGAAGAAGATAC+AGG | 0.483963 | 4_4:-61842269 | Msa0693030:CDS |
| GTTAGGGAGCTCCTAGGACT+AGG | 0.486760 | 4_4:-61836944 | Msa0693030:three_prime_UTR |
| GTTTAGAAATTGAACAAAAG+AGG | 0.488040 | 4_4:+61844745 | None:intergenic |
| TTCTTCCTGACAAAGGGCTG+GGG | 0.488589 | 4_4:+61837305 | None:intergenic |
| CTCTTCCACTTTATCAAACA+AGG | 0.488744 | 4_4:+61841643 | None:intergenic |
| CTTTCTTATAGGATGAAGCT+GGG | 0.488948 | 4_4:-61841727 | Msa0693030:intron |
| CTTGTTTGATAAAGTGGAAG+AGG | 0.495036 | 4_4:-61841642 | Msa0693030:intron |
| CAAATACATGCTGGGAGGCT+GGG | 0.498891 | 4_4:-61843281 | Msa0693030:CDS |
| CTGGTTGTTCCGAATTCAGT+AGG | 0.499226 | 4_4:+61837172 | None:intergenic |
| CAAAGTGCCCAAATACATGC+TGG | 0.502257 | 4_4:-61843290 | Msa0693030:CDS |
| CAGATTTGTATGAGGAACTA+AGG | 0.503712 | 4_4:+61839011 | None:intergenic |
| TGAACACGCACATTTGGCTC+TGG | 0.506028 | 4_4:-61843184 | Msa0693030:CDS |
| CAGACACCCGTGAATCAGTC+AGG | 0.506973 | 4_4:-61838795 | Msa0693030:intron |
| GATACGCTAGTGTCCATAAC+GGG | 0.512335 | 4_4:-61844793 | Msa0693030:five_prime_UTR |
| TGAAGTTAAAGAGGGCTCTC+CGG | 0.513998 | 4_4:-61842177 | Msa0693030:CDS |
| TGAGGATTCATACAAAGTAA+TGG | 0.517215 | 4_4:-61838087 | Msa0693030:CDS |
| GGTTTGGATGAAGAAGAGAA+TGG | 0.518565 | 4_4:+61844647 | None:intergenic |
| GGATTGTCAAAGGAAGAATT+AGG | 0.518607 | 4_4:-61839244 | Msa0693030:CDS |
| CGCACATTTGGCTCTGGAGA+AGG | 0.520642 | 4_4:-61843178 | Msa0693030:CDS |
| GTTGGGGTTAGGGAGCTCCT+AGG | 0.524754 | 4_4:-61836950 | Msa0693030:three_prime_UTR |
| GAAACAGAAGAAGGAGGCTG+AGG | 0.526794 | 4_4:-61842315 | Msa0693030:CDS |
| TTTGACGCCCTCTTGATATG+TGG | 0.528509 | 4_4:+61843224 | None:intergenic |
| GCACAACAGATGACCCTTCG+TGG | 0.528602 | 4_4:-61838872 | Msa0693030:CDS |
| ATGTCTACCTGACTGATTCA+CGG | 0.529282 | 4_4:+61838788 | None:intergenic |
| AACAGCTAGTATGAAGATCA+TGG | 0.529848 | 4_4:-61837035 | Msa0693030:intron |
| GTTTGGATGAAGAAGAGAAT+GGG | 0.530013 | 4_4:+61844648 | None:intergenic |
| TCCTTCACTTTCAGAATCAG+TGG | 0.530933 | 4_4:+61841667 | None:intergenic |
| GATGTAATAAGATGTAAAGA+TGG | 0.532369 | 4_4:-61844481 | Msa0693030:CDS |
| AATCCCTACTCGCAACGGCT+TGG | 0.532996 | 4_4:+61837455 | None:intergenic |
| CGGTCCTGATAGGAGTTTGA+AGG | 0.533208 | 4_4:-61838036 | Msa0693030:intron |
| GAAGCATCTGAGAATACTGA+TGG | 0.537435 | 4_4:-61839265 | Msa0693030:CDS |
| TGTCTACCTGACTGATTCAC+GGG | 0.537621 | 4_4:+61838789 | None:intergenic |
| GATTTCTGCGATTGCCCCGA+TGG | 0.539680 | 4_4:-61844424 | Msa0693030:CDS |
| ACAAATAATGAAGAGAATGA+AGG | 0.542197 | 4_4:-61839118 | Msa0693030:CDS |
| CTCTACGTCAGATTTGTATG+AGG | 0.542667 | 4_4:+61839003 | None:intergenic |
| TTCTGATGAAGCCATCAATA+CGG | 0.542935 | 4_4:-61841417 | Msa0693030:intron |
| AGAAGAAAGTATACTTAAAG+GGG | 0.543603 | 4_4:-61843127 | Msa0693030:CDS |
| GGGTGTCTGGAATATATTGA+CGG | 0.546399 | 4_4:+61838809 | None:intergenic |
| TTTGGTGATGATCTTGAATG+AGG | 0.553083 | 4_4:-61844865 | Msa0693030:five_prime_UTR |
| CGAGTCAATGATGGAATTTG+CGG | 0.553365 | 4_4:-61844223 | Msa0693030:intron |
| CTTTGGTATTGCAGGTACAT+CGG | 0.554528 | 4_4:-61844311 | Msa0693030:intron |
| CGAGACGAAAACAGAGACAC+AGG | 0.554823 | 4_4:+61844244 | None:intergenic |
| TAAACAGGCTAGCCAGGAGG+AGG | 0.555074 | 4_4:-61838287 | Msa0693030:CDS |
| TTATGTTTAGATTGCTGTGA+TGG | 0.562355 | 4_4:-61843336 | Msa0693030:intron |
| GCCAAACCAGATGAGACATA+AGG | 0.563949 | 4_4:+61836895 | None:intergenic |
| TGTCAAAGGAAGAATTAGGC+AGG | 0.563992 | 4_4:-61839240 | Msa0693030:CDS |
| AACAGGTCAAGCTAAAATGC+GGG | 0.566211 | 4_4:-61837508 | Msa0693030:intron |
| AAATGGAACGGGCAATCTGA+AGG | 0.566678 | 4_4:+61836796 | None:intergenic |
| GAGAAAATTGAAGTTAAAGA+GGG | 0.567079 | 4_4:-61842185 | Msa0693030:CDS |
| GAATGCAAAAGAAGCTGAGA+GGG | 0.568138 | 4_4:-61841489 | Msa0693030:CDS |
| CACACTAGAACGGTATAAGA+TGG | 0.568632 | 4_4:+61836632 | None:intergenic |
| AGAATGGAAACCAGGTTCAT+CGG | 0.576515 | 4_4:+61844399 | None:intergenic |
| AATGGTGATCATTGCTGGAA+CGG | 0.578500 | 4_4:-61838056 | Msa0693030:CDS |
| GGAAAAGGAGCGTTTACAGA+AGG | 0.581537 | 4_4:-61842348 | Msa0693030:CDS |
| CGTTGGACAGGAGAAGATGT+TGG | 0.584656 | 4_4:-61839205 | Msa0693030:CDS |
| AACCTTGGGGAGCGATTCCG+AGG | 0.585592 | 4_4:+61844612 | None:intergenic |
| TTTGGCTCTGGAGAAGGATG+AGG | 0.585737 | 4_4:-61843172 | Msa0693030:CDS |
| GCAGGCTTGTTGCTTCACGT+TGG | 0.589123 | 4_4:-61839222 | Msa0693030:CDS |
| AAACGATGAAGAATTTCAAG+AGG | 0.591771 | 4_4:-61839047 | Msa0693030:CDS |
| GCCATTCCACCACCCGTTTG+GGG | 0.596501 | 4_4:-61838264 | Msa0693030:intron |
| GAATACTGATGGATTGTCAA+AGG | 0.597321 | 4_4:-61839254 | Msa0693030:CDS |
| AAACCCAAAGACCCATTCCT+CGG | 0.598704 | 4_4:-61844629 | Msa0693030:CDS |
| GATCTCCTTTGAAAATGGAA+CGG | 0.604030 | 4_4:+61836784 | None:intergenic |
| TAGAAATTGAACAAAAGAGG+GGG | 0.604122 | 4_4:+61844748 | None:intergenic |
| CCTGGCTAGCCTGTTTATAG+GGG | 0.604222 | 4_4:+61838293 | None:intergenic |
| CACAATGACTACTTGGTCTG+TGG | 0.605592 | 4_4:-61836823 | Msa0693030:three_prime_UTR |
| TACAGGAATTGAAAATGAAG+CGG | 0.607388 | 4_4:-61842252 | Msa0693030:CDS |
| AAAGTGCCCAAATACATGCT+GGG | 0.607920 | 4_4:-61843289 | Msa0693030:CDS |
| GAACAGGTCAAGCTAAAATG+CGG | 0.608720 | 4_4:-61837509 | Msa0693030:intron |
| AACTGATTTGACAACTGGAA+AGG | 0.613288 | 4_4:-61841447 | Msa0693030:CDS |
| ATAACAATCCCTACTCGCAA+CGG | 0.613583 | 4_4:+61837450 | None:intergenic |
| AAAGATTGCCACATATCAAG+AGG | 0.614060 | 4_4:-61843232 | Msa0693030:CDS |
| TTCCTCGGAATCGCTCCCCA+AGG | 0.616903 | 4_4:-61844614 | Msa0693030:intron |
| AGAAGAGAAACAGAAGAAGG+AGG | 0.617934 | 4_4:-61842321 | Msa0693030:CDS |
| GCCACTGATTCTGAAAGTGA+AGG | 0.619286 | 4_4:-61841668 | Msa0693030:CDS |
| ACGCGAGGAGAAGAGAAATG+AGG | 0.624983 | 4_4:+61844678 | None:intergenic |
| AGAACAAATAGACAAGGCTG+AGG | 0.625081 | 4_4:-61842369 | Msa0693030:CDS |
| AGATGCTGCTCGTATACGCA+AGG | 0.627154 | 4_4:-61838697 | Msa0693030:CDS |
| GTCTAGGAATCACACTAGAA+CGG | 0.628998 | 4_4:+61836622 | None:intergenic |
| TCTGAAACTGACGACGACAC+CGG | 0.629370 | 4_4:-61839088 | Msa0693030:CDS |
| CAATGCTACAGGTCCAGCAA+AGG | 0.629416 | 4_4:-61838500 | Msa0693030:intron |
| AGAAATTGAACAAAAGAGGG+GGG | 0.629996 | 4_4:+61844749 | None:intergenic |
| CGATACGCTAGTGTCCATAA+CGG | 0.632084 | 4_4:-61844794 | Msa0693030:five_prime_UTR |
| GAGACGAAAACAGAGACACA+GGG | 0.636956 | 4_4:+61844245 | None:intergenic |
| TTTCTCATGAATACTTGCCG+CGG | 0.637229 | 4_4:+61842202 | None:intergenic |
| TTAGAAATTGAACAAAAGAG+GGG | 0.637796 | 4_4:+61844747 | None:intergenic |
| GATGGAAGTGATGAATATGA+TGG | 0.639953 | 4_4:-61843318 | Msa0693030:CDS |
| ATCAGTTTCAGATTCAACAG+TGG | 0.643721 | 4_4:+61841463 | None:intergenic |
| TTTCTTATAGGATGAAGCTG+GGG | 0.646594 | 4_4:-61841726 | Msa0693030:intron |
| TTGTCAGGAAGAAAAGCTGA+AGG | 0.652990 | 4_4:-61837295 | Msa0693030:intron |
| GGTACATCGGCGTGTCCGCG+TGG | 0.653397 | 4_4:-61844298 | Msa0693030:CDS |
| ACACGATGCAAAATACTAGA+CGG | 0.663631 | 4_4:-61836739 | Msa0693030:three_prime_UTR |
| AAGATTGCCACATATCAAGA+GGG | 0.666614 | 4_4:-61843231 | Msa0693030:CDS |
| AAACAGGCTAGCCAGGAGGA+GGG | 0.674511 | 4_4:-61838286 | Msa0693030:CDS |
| ATCAGGAAGATATTCTACAC+GGG | 0.675112 | 4_4:-61839141 | Msa0693030:CDS |
| GATCAGGAAGATATTCTACA+CGG | 0.678925 | 4_4:-61839142 | Msa0693030:CDS |
| AGAATGCAAAAGAAGCTGAG+AGG | 0.679629 | 4_4:-61841490 | Msa0693030:CDS |
| AAAACCTTACCCCAAACGGG+TGG | 0.683329 | 4_4:+61838255 | None:intergenic |
| TCATAAAGAACAAATAGACA+AGG | 0.689258 | 4_4:-61842375 | Msa0693030:CDS |
| CTATAAACAGGCTAGCCAGG+AGG | 0.720671 | 4_4:-61838290 | Msa0693030:CDS |
| AGACATCAAAGACAATTCCG+CGG | 0.722504 | 4_4:-61842219 | Msa0693030:CDS |
| CAGGTTCATCGGTGCCATCG+GGG | 0.723293 | 4_4:+61844410 | None:intergenic |
| GTGCCCAAATACATGCTGGG+AGG | 0.724802 | 4_4:-61843286 | Msa0693030:CDS |
| AGAATGGGACGAGAAACGCG+AGG | 0.754935 | 4_4:+61844663 | None:intergenic |
| AGACGAAAACAGAGACACAG+GGG | 0.769467 | 4_4:+61844246 | None:intergenic |
| CGACAGTAAAATGTTCCACG+CGG | 0.787877 | 4_4:+61844283 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATTTTGTACTTTTTA+AGG | - | chr4_4:61840733-61840752 | Msa0693030:intron | 10.0% |
| !!! | ATAAATTTTAAAACATTGTT+AGG | - | chr4_4:61841235-61841254 | Msa0693030:intron | 10.0% |
| !! | AGATAAAAATGTGTAAAAAA+TGG | + | chr4_4:61836842-61836861 | None:intergenic | 15.0% |
| !! | AAATAAAATAAAAGAGAGAA+TGG | + | chr4_4:61837035-61837054 | None:intergenic | 15.0% |
| !!! | ACTTCTAAATTTTTAAGTAT+AGG | + | chr4_4:61837511-61837530 | None:intergenic | 15.0% |
| !!! | TTACTTTTTGACATTAATTT+TGG | - | chr4_4:61837563-61837582 | Msa0693030:intron | 15.0% |
| !!! | ATAATAGATTTATTTTGCAT+TGG | - | chr4_4:61838513-61838532 | Msa0693030:intron | 15.0% |
| !! | TAGAATAAAACACTTTAATA+AGG | + | chr4_4:61839327-61839346 | None:intergenic | 15.0% |
| !!! | TAATAAGTTTTTCAATTTTG+AGG | + | chr4_4:61840850-61840869 | None:intergenic | 15.0% |
| !! | AAAAAGTTTCATGTATAAAT+AGG | + | chr4_4:61841098-61841117 | None:intergenic | 15.0% |
| !! | GAGTCTAATAAAAAAAATTA+AGG | + | chr4_4:61841269-61841288 | None:intergenic | 15.0% |
| !!! | GGTGTTTATTTATTTTAAAT+TGG | + | chr4_4:61841291-61841310 | None:intergenic | 15.0% |
| !!! | AGTATAAAGATATCAAATTT+TGG | - | chr4_4:61841911-61841930 | Msa0693030:intron | 15.0% |
| !! | TTAATTCAAATGTTTATCAA+AGG | - | chr4_4:61842467-61842486 | Msa0693030:intron | 15.0% |
| !! | TAATTCAAATGTTTATCAAA+GGG | - | chr4_4:61842468-61842487 | Msa0693030:intron | 15.0% |
| !! | ATTGTATCTATTCATTAAAA+CGG | - | chr4_4:61843461-61843480 | Msa0693030:intron | 15.0% |
| !! | CTAAAGTAATTATATTCATT+TGG | - | chr4_4:61843565-61843584 | Msa0693030:intron | 15.0% |
| !!! | TATTTTTTAAGAGAAATGTA+AGG | + | chr4_4:61843750-61843769 | None:intergenic | 15.0% |
| !!! | TGTAATTTTTTTTTATGAAG+TGG | - | chr4_4:61843856-61843875 | Msa0693030:intron | 15.0% |
| !!! | ATTATTAATTTTAGATGAAG+TGG | - | chr4_4:61844744-61844763 | Msa0693030:five_prime_UTR | 15.0% |
| !! | AACAAAATATAAAAAAGTCT+AGG | + | chr4_4:61844812-61844831 | None:intergenic | 15.0% |
| !!! | TTTTTTATATTTTGTTTGCA+TGG | - | chr4_4:61844816-61844835 | Msa0693030:five_prime_UTR | 15.0% |
| !! | ATTAATAACTGAGTAATATC+AGG | - | chr4_4:61836458-61836477 | Msa0693030:three_prime_UTR | 20.0% |
| !! | TTTAGAAATTGAACAAAAGA+GGG | + | chr4_4:61836672-61836691 | None:intergenic | 20.0% |
| !!! | AACACTCAATATGTTTTTAT+TGG | - | chr4_4:61837540-61837559 | Msa0693030:intron | 20.0% |
| !!! | TTTTTTGCAAACACAAATTA+AGG | - | chr4_4:61837623-61837642 | Msa0693030:intron | 20.0% |
| !!! | TTTTACTTTGTTATTTTCTC+TGG | - | chr4_4:61837675-61837694 | Msa0693030:intron | 20.0% |
| !!! | AAAGAAGAAAGTATACTTAA+AGG | - | chr4_4:61838286-61838305 | Msa0693030:CDS | 20.0% |
| !!! | AAGAAGAAAGTATACTTAAA+GGG | - | chr4_4:61838287-61838306 | Msa0693030:CDS | 20.0% |
| !!! | TATCCTTTAAGACAAAATTA+AGG | + | chr4_4:61838391-61838410 | None:intergenic | 20.0% |
| !!! | CTGTCAATTTTTTTTTTCTA+TGG | + | chr4_4:61838448-61838467 | None:intergenic | 20.0% |
| !! | TTCATCAATTGAAAATAGAT+GGG | + | chr4_4:61838730-61838749 | None:intergenic | 20.0% |
| !! | ACATACTTGCTTATTTAAAT+AGG | + | chr4_4:61839478-61839497 | None:intergenic | 20.0% |
| !! | AACATTGAAAACTTTCTTAT+AGG | - | chr4_4:61839677-61839696 | Msa0693030:intron | 20.0% |
| !! | AAAATCAAGTAAAAATGTTG+AGG | + | chr4_4:61839895-61839914 | None:intergenic | 20.0% |
| !!! | TATTTATCGAGTATTTTTCT+TGG | - | chr4_4:61840316-61840335 | Msa0693030:intron | 20.0% |
| !! | CAGATTTAAACAAAATGAAA+AGG | - | chr4_4:61840459-61840478 | Msa0693030:intron | 20.0% |
| !! | TTAAACAAAATGAAAAGGAA+TGG | - | chr4_4:61840464-61840483 | Msa0693030:intron | 20.0% |
| !!! | ACAAATATTTAAAACAGTCA+GGG | + | chr4_4:61840664-61840683 | None:intergenic | 20.0% |
| !!! | TTATTTTGAGTTCAATTTCT+TGG | + | chr4_4:61840943-61840962 | None:intergenic | 20.0% |
| !! | ATTTATACACAAACATTGAT+AGG | + | chr4_4:61841221-61841240 | None:intergenic | 20.0% |
| !!! | ATAAAGATATCAAATTTTGG+CGG | - | chr4_4:61841914-61841933 | Msa0693030:intron | 20.0% |
| !! | AAAAAACATCAATGAAAAGT+GGG | + | chr4_4:61842091-61842110 | None:intergenic | 20.0% |
| !! | AATTCAAATGTTTATCAAAG+GGG | - | chr4_4:61842469-61842488 | Msa0693030:intron | 20.0% |
| !!! | TTTTATATTCTCTGTAAAAG+AGG | - | chr4_4:61843263-61843282 | Msa0693030:CDS | 20.0% |
| !! | TTAACTCTTAAGAAAAAACA+TGG | + | chr4_4:61843624-61843643 | None:intergenic | 20.0% |
| ! | ACATAAAAATCTGACAAAAC+TGG | - | chr4_4:61836521-61836540 | Msa0693030:three_prime_UTR | 25.0% |
| ! | TTAGAAATTGAACAAAAGAG+GGG | + | chr4_4:61836671-61836690 | None:intergenic | 25.0% |
| ! | GTTTAGAAATTGAACAAAAG+AGG | + | chr4_4:61836673-61836692 | None:intergenic | 25.0% |
| ! | GATGTAATAAGATGTAAAGA+TGG | - | chr4_4:61836934-61836953 | Msa0693030:three_prime_UTR | 25.0% |
| ! | TTTGTTTCGTGTTGAATTAT+TGG | - | chr4_4:61837062-61837081 | Msa0693030:intron | 25.0% |
| !! | AAAGTCGGGTTTTTAAATAA+AGG | + | chr4_4:61837395-61837414 | None:intergenic | 25.0% |
| !!! | ATTAATTTTGGTGTAGAAAG+TGG | - | chr4_4:61837575-61837594 | Msa0693030:intron | 25.0% |
| ! | TTGCAAAAAATAAAGTACAC+CGG | + | chr4_4:61837613-61837632 | None:intergenic | 25.0% |
| ! | GCAACATGACTAAAAATATA+TGG | + | chr4_4:61837829-61837848 | None:intergenic | 25.0% |
| !! | AACACAATACTTTTAGATCA+TGG | + | chr4_4:61837945-61837964 | None:intergenic | 25.0% |
| !! | AGAAGAAAGTATACTTAAAG+GGG | - | chr4_4:61838288-61838307 | Msa0693030:CDS | 25.0% |
| !! | CTACCTTAATTTTGTCTTAA+AGG | - | chr4_4:61838385-61838404 | Msa0693030:intron | 25.0% |
| !!! | TAGATTTATTTTGCATTGGT+AGG | - | chr4_4:61838517-61838536 | Msa0693030:intron | 25.0% |
| ! | TAGGATCAAGTTAATGTATA+AGG | - | chr4_4:61838536-61838555 | Msa0693030:intron | 25.0% |
| ! | ATGTATAAGGAAATCTGATT+AGG | - | chr4_4:61838549-61838568 | Msa0693030:intron | 25.0% |
| ! | CATATGTGTAATTAAACAGT+TGG | + | chr4_4:61838694-61838713 | None:intergenic | 25.0% |
| ! | GTTCATCAATTGAAAATAGA+TGG | + | chr4_4:61838731-61838750 | None:intergenic | 25.0% |
| !!! | AACACTTTCCTTGTTTTAAA+AGG | - | chr4_4:61838836-61838855 | Msa0693030:CDS | 25.0% |
| ! | GTTAAAGAAAGAATTCCATT+TGG | + | chr4_4:61838995-61839014 | None:intergenic | 25.0% |
| ! | TCATAAAGAACAAATAGACA+AGG | - | chr4_4:61839040-61839059 | Msa0693030:CDS | 25.0% |
| ! | TGAGAAAATTGAAGTTAAAG+AGG | - | chr4_4:61839229-61839248 | Msa0693030:CDS | 25.0% |
| ! | GAGAAAATTGAAGTTAAAGA+GGG | - | chr4_4:61839230-61839249 | Msa0693030:CDS | 25.0% |
| ! | CTTGCTTATTTAAATAGGTA+CGG | + | chr4_4:61839473-61839492 | None:intergenic | 25.0% |
| !! | GAAGAGGTGAATAAAATTTT+TGG | - | chr4_4:61839789-61839808 | Msa0693030:intron | 25.0% |
| !! | CTTCAAAATTATTGTTGTTG+AGG | - | chr4_4:61839829-61839848 | Msa0693030:intron | 25.0% |
| ! | TTATATCTAATGAACACACA+TGG | + | chr4_4:61839867-61839886 | None:intergenic | 25.0% |
| ! | TCACTTAATCGACAATTATT+AGG | - | chr4_4:61840113-61840132 | Msa0693030:intron | 25.0% |
| ! | ACAATTATTAGGTCATAATG+AGG | - | chr4_4:61840124-61840143 | Msa0693030:intron | 25.0% |
| !!! | TCATAAAACTGACTTTTCTT+GGG | + | chr4_4:61840193-61840212 | None:intergenic | 25.0% |
| !!! | TCTAGTTTTTATGATATGAC+TGG | + | chr4_4:61840229-61840248 | None:intergenic | 25.0% |
| !! | ATAATCAAGTGCAATTGTTT+TGG | + | chr4_4:61840299-61840318 | None:intergenic | 25.0% |
| ! | AGACTAGATAACGTAATTAT+TGG | + | chr4_4:61840342-61840361 | None:intergenic | 25.0% |
| ! | AAATATTCTGCAATCACTTA+TGG | + | chr4_4:61840368-61840387 | None:intergenic | 25.0% |
| ! | GTTATGTAAATTGCAATCAA+TGG | - | chr4_4:61840610-61840629 | Msa0693030:intron | 25.0% |
| !!! | GCTTTAAACTCTTTTTTACT+GGG | - | chr4_4:61840632-61840651 | Msa0693030:intron | 25.0% |
| !! | CACAAATATTTAAAACAGTC+AGG | + | chr4_4:61840665-61840684 | None:intergenic | 25.0% |
| ! | GTAATGTATATAACAGGATA+AGG | + | chr4_4:61840810-61840829 | None:intergenic | 25.0% |
| ! | TTAGCAGAAAAAACATATCA+TGG | - | chr4_4:61840867-61840886 | Msa0693030:intron | 25.0% |
| ! | TTTCATGTATAAATAGGACT+AGG | + | chr4_4:61841092-61841111 | None:intergenic | 25.0% |
| ! | TAAACACCAATCACAAATAA+AGG | - | chr4_4:61841303-61841322 | Msa0693030:intron | 25.0% |
| !!! | ATTTTGATTGATAATGTGCT+AGG | - | chr4_4:61841661-61841680 | Msa0693030:CDS | 25.0% |
| !!! | TTTTGATTGATAATGTGCTA+GGG | - | chr4_4:61841662-61841681 | Msa0693030:CDS | 25.0% |
| ! | GAATTCAATTTGATAGGATT+GGG | + | chr4_4:61841794-61841813 | None:intergenic | 25.0% |
| ! | TGAATTCAATTTGATAGGAT+TGG | + | chr4_4:61841795-61841814 | None:intergenic | 25.0% |
| ! | AATCCTATCAAATTGAATTC+AGG | - | chr4_4:61841794-61841813 | Msa0693030:intron | 25.0% |
| ! | ATCCTATCAAATTGAATTCA+GGG | - | chr4_4:61841795-61841814 | Msa0693030:intron | 25.0% |
| ! | AAAAACATCAATGAAAAGTG+GGG | + | chr4_4:61842090-61842109 | None:intergenic | 25.0% |
| ! | GAAAAAACATCAATGAAAAG+TGG | + | chr4_4:61842092-61842111 | None:intergenic | 25.0% |
| !!! | TGTTTTTTCTTTTCTCTTTG+TGG | - | chr4_4:61842103-61842122 | Msa0693030:intron | 25.0% |
| !!! | GTTTTTTCTTTTCTCTTTGT+GGG | - | chr4_4:61842104-61842123 | Msa0693030:intron | 25.0% |
| ! | TGGGTATATACATATCTTTA+GGG | - | chr4_4:61842123-61842142 | Msa0693030:intron | 25.0% |
| ! | ACAAATAATGAAGAGAATGA+AGG | - | chr4_4:61842297-61842316 | Msa0693030:CDS | 25.0% |
| ! | AGAAAATACAGAAATCTGTA+TGG | - | chr4_4:61842570-61842589 | Msa0693030:intron | 25.0% |
| ! | ATCTGTATGGAATATTATTC+AGG | - | chr4_4:61842583-61842602 | Msa0693030:intron | 25.0% |
| ! | ACAAATATTATTTGTCCAGA+TGG | - | chr4_4:61842663-61842682 | Msa0693030:intron | 25.0% |
| !! | CAAAAGCAAAAACTTGATTT+TGG | - | chr4_4:61842800-61842819 | Msa0693030:intron | 25.0% |
| !! | AACAGAAAGTAAACTTTTAG+GGG | + | chr4_4:61843003-61843022 | None:intergenic | 25.0% |
| !! | CAACAGAAAGTAAACTTTTA+GGG | + | chr4_4:61843004-61843023 | None:intergenic | 25.0% |
| !! | ACAACAGAAAGTAAACTTTT+AGG | + | chr4_4:61843005-61843024 | None:intergenic | 25.0% |
| !! | TAATTCAGTTTTCTTTTCAC+AGG | - | chr4_4:61843291-61843310 | Msa0693030:CDS | 25.0% |
| !! | AAAGTAATGGTGTTTTCTAA+TGG | - | chr4_4:61843341-61843360 | Msa0693030:intron | 25.0% |
| !!! | TAATTAAATTGACTAGTCTG+TGG | - | chr4_4:61843781-61843800 | Msa0693030:intron | 25.0% |
| !!! | AATTAAATTGACTAGTCTGT+GGG | - | chr4_4:61843782-61843801 | Msa0693030:intron | 25.0% |
| ! | CATGGAAATAAAAACTTGAA+AGG | - | chr4_4:61843811-61843830 | Msa0693030:intron | 25.0% |
| ! | ATTAGTTATCGTGTAATGAT+TGG | + | chr4_4:61844154-61844173 | None:intergenic | 25.0% |
| ! | AAACTCAAATGAATCTTAAC+TGG | - | chr4_4:61844286-61844305 | Msa0693030:CDS | 25.0% |
| ! | CTCTAGTATACAAAACTTAA+GGG | + | chr4_4:61844425-61844444 | None:intergenic | 25.0% |
| ! | AATAAAAGAAAAATGCGCTA+AGG | + | chr4_4:61844567-61844586 | None:intergenic | 25.0% |
| ! | TTAAAATCACAATGACTACT+TGG | - | chr4_4:61844585-61844604 | Msa0693030:intron | 25.0% |
| !! | ATAAAGATCTCCTTTGAAAA+TGG | + | chr4_4:61844639-61844658 | None:intergenic | 25.0% |
| !!! | AATTTGGTTTTAGAATCTCT+GGG | + | chr4_4:61844702-61844721 | None:intergenic | 25.0% |
| !!! | AAATTTGGTTTTAGAATCTC+TGG | + | chr4_4:61844703-61844722 | None:intergenic | 25.0% |
| !!! | GAGATTCTAAAACCAAATTT+TGG | - | chr4_4:61844703-61844722 | Msa0693030:CDS | 25.0% |
| ! | AACTCATTCTAACCAAAATT+TGG | + | chr4_4:61844718-61844737 | None:intergenic | 25.0% |
| !!! | TATATTTTGTTTGCATGGAT+AGG | - | chr4_4:61844821-61844840 | Msa0693030:five_prime_UTR | 25.0% |
| !!! | AAAAACTTGTTGAAAAAGGT+TGG | + | chr4_4:61844888-61844907 | None:intergenic | 25.0% |
| !!! | AACCTTTTTCAACAAGTTTT+TGG | - | chr4_4:61844887-61844906 | Msa0693030:five_prime_UTR | 25.0% |
| TAGAAATTGAACAAAAGAGG+GGG | + | chr4_4:61836670-61836689 | None:intergenic | 30.0% | |
| TGTTATAGAAATGACGATGA+CGG | - | chr4_4:61836869-61836888 | Msa0693030:three_prime_UTR | 30.0% | |
| CTGATCTTTGTTGAAATTAG+CGG | + | chr4_4:61836962-61836981 | None:intergenic | 30.0% | |
| ! | TTGGTGATTGTTTATTCATG+TGG | - | chr4_4:61837081-61837100 | Msa0693030:intron | 30.0% |
| ATTGTTTATTCATGTGGCTT+TGG | - | chr4_4:61837087-61837106 | Msa0693030:intron | 30.0% | |
| TAATGGTTATCGTGGAAAAT+TGG | - | chr4_4:61837288-61837307 | Msa0693030:intron | 30.0% | |
| AATGGTTATCGTGGAAAATT+GGG | - | chr4_4:61837289-61837308 | Msa0693030:intron | 30.0% | |
| GAAGAAGAAAAAGACCATAT+TGG | - | chr4_4:61837458-61837477 | Msa0693030:intron | 30.0% | |
| AGAAAAAGACCATATTGGAT+AGG | - | chr4_4:61837463-61837482 | Msa0693030:intron | 30.0% | |
| GTATCTATACCTATCCAATA+TGG | + | chr4_4:61837475-61837494 | None:intergenic | 30.0% | |
| AGTGTAGATACCTAGATATA+TGG | - | chr4_4:61837717-61837736 | Msa0693030:intron | 30.0% | |
| AATCTCTATGCCATATATCT+AGG | + | chr4_4:61837730-61837749 | None:intergenic | 30.0% | |
| TCACAGCAATCTAAACATAA+CGG | + | chr4_4:61838079-61838098 | None:intergenic | 30.0% | |
| TTATGTTTAGATTGCTGTGA+TGG | - | chr4_4:61838079-61838098 | Msa0693030:CDS | 30.0% | |
| AAAAGGGCAGAACAAAAAAA+TGG | + | chr4_4:61838335-61838354 | None:intergenic | 30.0% | |
| AGTACATCATTACGAGAAAA+GGG | + | chr4_4:61838351-61838370 | None:intergenic | 30.0% | |
| AAGTACATCATTACGAGAAA+AGG | + | chr4_4:61838352-61838371 | None:intergenic | 30.0% | |
| TTCTCGTAATGATGTACTTA+AGG | - | chr4_4:61838353-61838372 | Msa0693030:intron | 30.0% | |
| GCAAGAAACCTTAAAATGTT+CGG | - | chr4_4:61838638-61838657 | Msa0693030:CDS | 30.0% | |
| TGTTTAATTACACATATGCC+CGG | - | chr4_4:61838696-61838715 | Msa0693030:CDS | 30.0% | |
| AATTGAAAATAGATGGGTGT+GGG | + | chr4_4:61838724-61838743 | None:intergenic | 30.0% | |
| ! | ATTACCTGTCTGTTTTACAA+TGG | - | chr4_4:61838775-61838794 | Msa0693030:intron | 30.0% |
| ! | TTACCTGTCTGTTTTACAAT+GGG | - | chr4_4:61838776-61838795 | Msa0693030:intron | 30.0% |
| !!! | TGATCTTGCCTTTTAAAACA+AGG | + | chr4_4:61838847-61838866 | None:intergenic | 30.0% |
| ! | TCATAAAGGATGTGAACTTT+TGG | - | chr4_4:61838908-61838927 | Msa0693030:intron | 30.0% |
| ! | CAATTTTCTATGCTACCAAA+TGG | - | chr4_4:61838977-61838996 | Msa0693030:intron | 30.0% |
| TTGTTCTTTATGATCTGCAA+TGG | + | chr4_4:61839033-61839052 | None:intergenic | 30.0% | |
| AAAAGAAGAGAAACAGAAGA+AGG | - | chr4_4:61839091-61839110 | Msa0693030:CDS | 30.0% | |
| AAAACCAATGAAGAAGATAC+AGG | - | chr4_4:61839146-61839165 | Msa0693030:CDS | 30.0% | |
| AATTCCTGTATCTTCTTCAT+TGG | + | chr4_4:61839153-61839172 | None:intergenic | 30.0% | |
| TACAGGAATTGAAAATGAAG+CGG | - | chr4_4:61839163-61839182 | Msa0693030:CDS | 30.0% | |
| ! | TTTTGAACGCATTAACAATC+TGG | - | chr4_4:61839349-61839368 | Msa0693030:intron | 30.0% |
| ! | CAAAATTATTGTTGTTGAGG+TGG | - | chr4_4:61839832-61839851 | Msa0693030:intron | 30.0% |
| ! | TTCTTTTGCATTCTACATTC+AGG | + | chr4_4:61839919-61839938 | None:intergenic | 30.0% |
| !! | CATAAAACTGACTTTTCTTG+GGG | + | chr4_4:61840192-61840211 | None:intergenic | 30.0% |
| !! | GTCATAAAACTGACTTTTCT+TGG | + | chr4_4:61840194-61840213 | None:intergenic | 30.0% |
| TGATTGCAGAATATTTCTTG+TGG | - | chr4_4:61840372-61840391 | Msa0693030:intron | 30.0% | |
| ATCCAAATCTGAGAAATCAA+AGG | + | chr4_4:61840413-61840432 | None:intergenic | 30.0% | |
| ATTTCTCAGATTTGGATGAA+AGG | - | chr4_4:61840416-61840435 | Msa0693030:intron | 30.0% | |
| !!! | GGCTTTAAACTCTTTTTTAC+TGG | - | chr4_4:61840631-61840650 | Msa0693030:intron | 30.0% |
| !!! | AGCTAAACTGCATTTTTTGA+AGG | - | chr4_4:61840701-61840720 | Msa0693030:intron | 30.0% |
| GTAGGTGTAATGTATATAAC+AGG | + | chr4_4:61840816-61840835 | None:intergenic | 30.0% | |
| ! | TTTGAGGATATCTTTGTTGT+AGG | + | chr4_4:61840834-61840853 | None:intergenic | 30.0% |
| ! | ACAATGGTAATTTTCCATGA+AGG | + | chr4_4:61840906-61840925 | None:intergenic | 30.0% |
| ATTTAGAAATATACCCTCCT+AGG | - | chr4_4:61840982-61841001 | Msa0693030:intron | 30.0% | |
| TAATGTGTCTATTGTAGAAG+GGG | + | chr4_4:61841012-61841031 | None:intergenic | 30.0% | |
| GTAATGTGTCTATTGTAGAA+GGG | + | chr4_4:61841013-61841032 | None:intergenic | 30.0% | |
| AGTAATGTGTCTATTGTAGA+AGG | + | chr4_4:61841014-61841033 | None:intergenic | 30.0% | |
| TAGTAGTTAGAGAAGTTAGT+TGG | + | chr4_4:61841136-61841155 | None:intergenic | 30.0% | |
| !! | GTTTGTTATGATATGGGATA+AGG | + | chr4_4:61841188-61841207 | None:intergenic | 30.0% |
| !! | TGAGGAGTTTGTTATGATAT+GGG | + | chr4_4:61841194-61841213 | None:intergenic | 30.0% |
| !! | ATGAGGAGTTTGTTATGATA+TGG | + | chr4_4:61841195-61841214 | None:intergenic | 30.0% |
| CAAACATTGATAGGATAATG+AGG | + | chr4_4:61841212-61841231 | None:intergenic | 30.0% | |
| ! | GTATGACCTTTATTTGTGAT+TGG | + | chr4_4:61841312-61841331 | None:intergenic | 30.0% |
| !!! | TGTTTTTGTTTTAGCTCTGT+TGG | + | chr4_4:61841357-61841376 | None:intergenic | 30.0% |
| !!! | GAGCACTACAACTTTTTTAA+TGG | + | chr4_4:61841493-61841512 | None:intergenic | 30.0% |
| ! | AGACTATTTCCCTATTTTGT+TGG | + | chr4_4:61841615-61841634 | None:intergenic | 30.0% |
| ATCCCTGAATTCAATTTGAT+AGG | + | chr4_4:61841800-61841819 | None:intergenic | 30.0% | |
| ATCAAATTGAATTCAGGGAT+AGG | - | chr4_4:61841800-61841819 | Msa0693030:intron | 30.0% | |
| ATAAGGTTTATGTACAGAAG+AGG | + | chr4_4:61841869-61841888 | None:intergenic | 30.0% | |
| !! | GAAATATTTAACTTGTGAGC+AGG | + | chr4_4:61841994-61842013 | None:intergenic | 30.0% |
| AGCAATCTATCAGTTCATAT+AGG | + | chr4_4:61842020-61842039 | None:intergenic | 30.0% | |
| AAAACATCAATGAAAAGTGG+GGG | + | chr4_4:61842089-61842108 | None:intergenic | 30.0% | |
| GTGGGTATATACATATCTTT+AGG | - | chr4_4:61842122-61842141 | Msa0693030:intron | 30.0% | |
| GGGTATATACATATCTTTAG+GGG | - | chr4_4:61842124-61842143 | Msa0693030:intron | 30.0% | |
| TATATCTTCGTCATATTTGC+CGG | + | chr4_4:61842349-61842368 | None:intergenic | 30.0% | |
| AAACGATGAAGAATTTCAAG+AGG | - | chr4_4:61842368-61842387 | Msa0693030:CDS | 30.0% | |
| ATAACTTACACCTTTCTCTT+TGG | - | chr4_4:61842688-61842707 | Msa0693030:intron | 30.0% | |
| !! | AGACTGTATTTTAGACAACT+TGG | + | chr4_4:61842762-61842781 | None:intergenic | 30.0% |
| AAGTAAAACTTCAATGCTAC+AGG | - | chr4_4:61842904-61842923 | Msa0693030:intron | 30.0% | |
| AATGAATAAAACTCCTTTGC+TGG | + | chr4_4:61842931-61842950 | None:intergenic | 30.0% | |
| !!! | ACTTTCTGGGATGAAAATTT+TGG | - | chr4_4:61843076-61843095 | Msa0693030:intron | 30.0% |
| TGAGGATTCATACAAAGTAA+TGG | - | chr4_4:61843328-61843347 | Msa0693030:CDS | 30.0% | |
| CCTCTCAAAACTGAAATAAA+TGG | + | chr4_4:61843436-61843455 | None:intergenic | 30.0% | |
| !!! | CCATTTATTTCAGTTTTGAG+AGG | - | chr4_4:61843433-61843452 | Msa0693030:intron | 30.0% |
| ! | TATACTCAACTGTTACTTAC+AGG | - | chr4_4:61843521-61843540 | Msa0693030:intron | 30.0% |
| ! | AGAGTTAAGAGCGTATTAAT+AGG | - | chr4_4:61843636-61843655 | Msa0693030:intron | 30.0% |
| ATAGGTATAATAGCTCATCT+TGG | - | chr4_4:61843654-61843673 | Msa0693030:intron | 30.0% | |
| TAGGTATAATAGCTCATCTT+GGG | - | chr4_4:61843655-61843674 | Msa0693030:intron | 30.0% | |
| TACTTTCAGTGAGTTATACT+TGG | - | chr4_4:61843687-61843706 | Msa0693030:intron | 30.0% | |
| !! | ATTAAATTGACTAGTCTGTG+GGG | - | chr4_4:61843783-61843802 | Msa0693030:intron | 30.0% |
| GGAAATAAAAACTTGAAAGG+TGG | - | chr4_4:61843814-61843833 | Msa0693030:intron | 30.0% | |
| TAAAAACTTGAAAGGTGGTT+TGG | - | chr4_4:61843819-61843838 | Msa0693030:intron | 30.0% | |
| !!! | TTAATGGCTTGTTTTTGAAC+AGG | - | chr4_4:61843890-61843909 | Msa0693030:intron | 30.0% |
| AAATGAAGACAAGTGGTAAA+AGG | + | chr4_4:61844007-61844026 | None:intergenic | 30.0% | |
| TTTACCACTTGTCTTCATTT+AGG | - | chr4_4:61844007-61844026 | Msa0693030:intron | 30.0% | |
| ATATTGTCCTTACCTCAATA+TGG | - | chr4_4:61844172-61844191 | Msa0693030:intron | 30.0% | |
| ATAAATGCCATATTGAGGTA+AGG | + | chr4_4:61844182-61844201 | None:intergenic | 30.0% | |
| TCACTATAAATGCCATATTG+AGG | + | chr4_4:61844187-61844206 | None:intergenic | 30.0% | |
| ATCTTAACTGGTAAGTTTAC+TGG | - | chr4_4:61844298-61844317 | Msa0693030:CDS | 30.0% | |
| GCTCTAGTATACAAAACTTA+AGG | + | chr4_4:61844426-61844445 | None:intergenic | 30.0% | |
| !! | AGCCAAAAACTTGTTGAAAA+AGG | + | chr4_4:61844892-61844911 | None:intergenic | 30.0% |
| TGACAAAACTGGTACGAATT+TGG | - | chr4_4:61836532-61836551 | Msa0693030:three_prime_UTR | 35.0% | |
| !! | TTTGGTGATGATCTTGAATG+AGG | - | chr4_4:61836550-61836569 | Msa0693030:three_prime_UTR | 35.0% |
| AGAAATTGAACAAAAGAGGG+GGG | + | chr4_4:61836669-61836688 | None:intergenic | 35.0% | |
| GTTTGGATGAAGAAGAGAAT+GGG | + | chr4_4:61836770-61836789 | None:intergenic | 35.0% | |
| TAAAAGAGAGAATGGAAACC+AGG | + | chr4_4:61837027-61837046 | None:intergenic | 35.0% | |
| ! | ACATTTTACTGTCGTAATGC+TGG | - | chr4_4:61837141-61837160 | Msa0693030:exon | 35.0% |
| ! | CATTTTACTGTCGTAATGCT+GGG | - | chr4_4:61837142-61837161 | Msa0693030:exon | 35.0% |
| ! | TAGACTTTACTGCTTTAGAC+AGG | - | chr4_4:61837251-61837270 | Msa0693030:intron | 35.0% |
| ! | AGACTTTACTGCTTTAGACA+GGG | - | chr4_4:61837252-61837271 | Msa0693030:intron | 35.0% |
| ! | AGGGTTTTACATAGCGATAA+TGG | - | chr4_4:61837271-61837290 | Msa0693030:intron | 35.0% |
| ATGGTTATCGTGGAAAATTG+GGG | - | chr4_4:61837290-61837309 | Msa0693030:intron | 35.0% | |
| ! | GTGTAGAAAGTGGACATTTT+TGG | - | chr4_4:61837585-61837604 | Msa0693030:intron | 35.0% |
| !! | AAAGTGGACATTTTTGGATC+CGG | - | chr4_4:61837591-61837610 | Msa0693030:intron | 35.0% |
| ACATGCTGCTAAAACAATCT+CGG | + | chr4_4:61837797-61837816 | None:intergenic | 35.0% | |
| CAAGCACCTTATGTTGTTAT+CGG | - | chr4_4:61837870-61837889 | Msa0693030:intron | 35.0% | |
| TAAGCAGATGAACAGTGTAA+GGG | + | chr4_4:61837897-61837916 | None:intergenic | 35.0% | |
| TTAAGCAGATGAACAGTGTA+AGG | + | chr4_4:61837898-61837917 | None:intergenic | 35.0% | |
| AGCAGTTAATTGGGTATCAA+TGG | + | chr4_4:61837985-61838004 | None:intergenic | 35.0% | |
| GATGGAAGTGATGAATATGA+TGG | - | chr4_4:61838097-61838116 | Msa0693030:CDS | 35.0% | |
| AAAGATTGCCACATATCAAG+AGG | - | chr4_4:61838183-61838202 | Msa0693030:intron | 35.0% | |
| AAGATTGCCACATATCAAGA+GGG | - | chr4_4:61838184-61838203 | Msa0693030:intron | 35.0% | |
| GAAATCTGATTAGGAAAGCA+GGG | - | chr4_4:61838558-61838577 | Msa0693030:intron | 35.0% | |
| GATACAGCAATTGTTGTGTT+TGG | - | chr4_4:61838580-61838599 | Msa0693030:intron | 35.0% | |
| ! | TTGGTTTGAAGTGCTAGATT+AGG | - | chr4_4:61838599-61838618 | Msa0693030:intron | 35.0% |
| ! | ATGCTCTTCCGAACATTTTA+AGG | + | chr4_4:61838649-61838668 | None:intergenic | 35.0% |
| CAATTGAAAATAGATGGGTG+TGG | + | chr4_4:61838725-61838744 | None:intergenic | 35.0% | |
| GTAAAACAGACAGGTAATAG+TGG | + | chr4_4:61838773-61838792 | None:intergenic | 35.0% | |
| GCGTGAAATCTGTAATTTCA+CGG | + | chr4_4:61838884-61838903 | None:intergenic | 35.0% | |
| GATTTCACGCTATGTCATAA+AGG | - | chr4_4:61838894-61838913 | Msa0693030:intron | 35.0% | |
| !! | AAGGATGTGAACTTTTGGTT+TGG | - | chr4_4:61838913-61838932 | Msa0693030:intron | 35.0% |
| !!! | AGGATGTGAACTTTTGGTTT+GGG | - | chr4_4:61838914-61838933 | Msa0693030:intron | 35.0% |
| !!! | ACTTTTGGTTTGGGTGATAA+AGG | - | chr4_4:61838923-61838942 | Msa0693030:intron | 35.0% |
| ! | GTCGAGTTGTGCAATTAAAA+TGG | + | chr4_4:61839287-61839306 | None:intergenic | 35.0% |
| TAGGAGGATGATAAAAGATC+AGG | + | chr4_4:61839423-61839442 | None:intergenic | 35.0% | |
| ! | TGATCTTTTATCATCCTCCT+AGG | - | chr4_4:61839422-61839441 | Msa0693030:intron | 35.0% |
| ACTTTCTTATAGGATGAAGC+TGG | - | chr4_4:61839687-61839706 | Msa0693030:intron | 35.0% | |
| CTTTCTTATAGGATGAAGCT+GGG | - | chr4_4:61839688-61839707 | Msa0693030:intron | 35.0% | |
| TTTCTTATAGGATGAAGCTG+GGG | - | chr4_4:61839689-61839708 | Msa0693030:intron | 35.0% | |
| ! | AGGATCCTTGTTTGATAAAG+TGG | - | chr4_4:61839767-61839786 | Msa0693030:intron | 35.0% |
| CTCTTCCACTTTATCAAACA+AGG | + | chr4_4:61839775-61839794 | None:intergenic | 35.0% | |
| CTTGTTTGATAAAGTGGAAG+AGG | - | chr4_4:61839773-61839792 | Msa0693030:intron | 35.0% | |
| ATCAGTTTCAGATTCAACAG+TGG | + | chr4_4:61839955-61839974 | None:intergenic | 35.0% | |
| !! | TCTGAAACTGATTTGACAAC+TGG | - | chr4_4:61839963-61839982 | Msa0693030:intron | 35.0% |
| !! | AACTGATTTGACAACTGGAA+AGG | - | chr4_4:61839968-61839987 | Msa0693030:intron | 35.0% |
| TTCTGATGAAGCCATCAATA+CGG | - | chr4_4:61839998-61840017 | Msa0693030:intron | 35.0% | |
| ATTAGGTCATAATGAGGTAC+CGG | - | chr4_4:61840130-61840149 | Msa0693030:intron | 35.0% | |
| ACAAAAATAGAAGAGCCTAC+CGG | + | chr4_4:61840152-61840171 | None:intergenic | 35.0% | |
| TATTCTGCAATCACTTATGG+AGG | + | chr4_4:61840365-61840384 | None:intergenic | 35.0% | |
| ! | TGCCTTTGATTTCTCAGATT+TGG | - | chr4_4:61840408-61840427 | Msa0693030:intron | 35.0% |
| ATTTGGATGAAAGGAAACAC+TGG | - | chr4_4:61840425-61840444 | Msa0693030:intron | 35.0% | |
| TTTGGATGAAAGGAAACACT+GGG | - | chr4_4:61840426-61840445 | Msa0693030:intron | 35.0% | |
| ATCTAACTTTGTCATGTCAG+AGG | + | chr4_4:61840530-61840549 | None:intergenic | 35.0% | |
| GAATTATCTGTCTTCCTTCA+TGG | - | chr4_4:61840889-61840908 | Msa0693030:intron | 35.0% | |
| ATTACCATTGTGAGTGTGTT+AGG | - | chr4_4:61840915-61840934 | Msa0693030:intron | 35.0% | |
| GAGAATACATGAATAGAGGA+GGG | + | chr4_4:61841070-61841089 | None:intergenic | 35.0% | |
| CTAGGAGAATACATGAATAG+AGG | + | chr4_4:61841074-61841093 | None:intergenic | 35.0% | |
| GGAGCAGTTAGTAACAATAT+AGG | + | chr4_4:61841167-61841186 | None:intergenic | 35.0% | |
| CAAAATAGGGAAATAGTCTC+AGG | - | chr4_4:61841616-61841635 | Msa0693030:intron | 35.0% | |
| GTCTATCAGGTTTCAGATTA+GGG | - | chr4_4:61841638-61841657 | Msa0693030:intron | 35.0% | |
| GAGATACTCCAACATTTGTT+TGG | + | chr4_4:61841735-61841754 | None:intergenic | 35.0% | |
| ! | AACAAATGTTGGAGTATCTC+TGG | - | chr4_4:61841735-61841754 | Msa0693030:intron | 35.0% |
| TCAATTTGATAGGATTGGGT+GGG | + | chr4_4:61841790-61841809 | None:intergenic | 35.0% | |
| TTCAATTTGATAGGATTGGG+TGG | + | chr4_4:61841791-61841810 | None:intergenic | 35.0% | |
| AAATCAAACTTTGTGCCTTG+TGG | - | chr4_4:61841944-61841963 | Msa0693030:intron | 35.0% | |
| AAGTGAATATGAGTTCCACA+AGG | + | chr4_4:61841962-61841981 | None:intergenic | 35.0% | |
| !! | GAATACTGATGGATTGTCAA+AGG | - | chr4_4:61842161-61842180 | Msa0693030:intron | 35.0% |
| GGATTGTCAAAGGAAGAATT+AGG | - | chr4_4:61842171-61842190 | Msa0693030:CDS | 35.0% | |
| TTCATTGTCTAATGCAGTGT+TGG | + | chr4_4:61842253-61842272 | None:intergenic | 35.0% | |
| TGCATTAGACAATGAAGATC+AGG | - | chr4_4:61842257-61842276 | Msa0693030:CDS | 35.0% | |
| GATCAGGAAGATATTCTACA+CGG | - | chr4_4:61842273-61842292 | Msa0693030:CDS | 35.0% | |
| ATCAGGAAGATATTCTACAC+GGG | - | chr4_4:61842274-61842293 | Msa0693030:CDS | 35.0% | |
| CAGATTTGTATGAGGAACTA+AGG | + | chr4_4:61842407-61842426 | None:intergenic | 35.0% | |
| TATAACAAACCTGACAAGTC+TGG | + | chr4_4:61842444-61842463 | None:intergenic | 35.0% | |
| TCAAATGTTTATCAAAGGGG+TGG | - | chr4_4:61842472-61842491 | Msa0693030:intron | 35.0% | |
| ATCAAAGGGGTGGTATATAA+TGG | - | chr4_4:61842482-61842501 | Msa0693030:intron | 35.0% | |
| ! | GTATTTTCTCTAACCACGAA+GGG | + | chr4_4:61842559-61842578 | None:intergenic | 35.0% |
| ! | TGTATTTTCTCTAACCACGA+AGG | + | chr4_4:61842560-61842579 | None:intergenic | 35.0% |
| AGGTGTAAGTTATATCCATC+TGG | + | chr4_4:61842681-61842700 | None:intergenic | 35.0% | |
| TCTAAAGAAGCCAAAGAGAA+AGG | + | chr4_4:61842701-61842720 | None:intergenic | 35.0% | |
| !! | CAAGTTTTTGCTTTTGTGTC+AGG | + | chr4_4:61842796-61842815 | None:intergenic | 35.0% |
| !!! | GATTTTGGTTAGTATCATGC+TGG | - | chr4_4:61842815-61842834 | Msa0693030:intron | 35.0% |
| ! | CACAATACAAATGCTTTGAG+TGG | + | chr4_4:61842850-61842869 | None:intergenic | 35.0% |
| ! | CACTCAAAGCATTTGTATTG+TGG | - | chr4_4:61842848-61842867 | Msa0693030:intron | 35.0% |
| ! | TCAAAGCATTTGTATTGTGG+AGG | - | chr4_4:61842851-61842870 | Msa0693030:intron | 35.0% |
| !!! | TGGGATGAAAATTTTGGTTC+AGG | - | chr4_4:61843082-61843101 | Msa0693030:intron | 35.0% |
| TTAATCAGACTGTGTTTCTC+CGG | - | chr4_4:61843201-61843220 | Msa0693030:CDS | 35.0% | |
| !!! | ATGCTCGAGTTTTTTTGAAC+CGG | + | chr4_4:61843223-61843242 | None:intergenic | 35.0% |
| AAAAAAACTCGAGCATCAGT+TGG | - | chr4_4:61843227-61843246 | Msa0693030:CDS | 35.0% | |
| TTTCTAATGGTGATCATTGC+TGG | - | chr4_4:61843354-61843373 | Msa0693030:intron | 35.0% | |
| TTCATTTGGATCACAAGTGT+TGG | - | chr4_4:61843579-61843598 | Msa0693030:intron | 35.0% | |
| !! | TTGGTGACTTTTGCAACATT+GGG | - | chr4_4:61843706-61843725 | Msa0693030:intron | 35.0% |
| !! | AGTGGACTGTCTGTAATTAA+TGG | - | chr4_4:61843874-61843893 | Msa0693030:intron | 35.0% |
| TTGACCTAAATGAAGACAAG+TGG | + | chr4_4:61844014-61844033 | None:intergenic | 35.0% | |
| TATGGCATTTATAGTGACTG+TGG | - | chr4_4:61844190-61844209 | Msa0693030:intron | 35.0% | |
| ! | TGAGTTTTCACAACTCATCA+CGG | + | chr4_4:61844273-61844292 | None:intergenic | 35.0% |
| ! | GCATTGTGATTCCTTTTCTT+TGG | - | chr4_4:61844320-61844339 | Msa0693030:intron | 35.0% |
| GACTCAAATCTCCAAAGAAA+AGG | + | chr4_4:61844334-61844353 | None:intergenic | 35.0% | |
| ! | TTTCTTTGGAGATTTGAGTC+CGG | - | chr4_4:61844334-61844353 | Msa0693030:intron | 35.0% |
| ! | GCAAAAAAGTTGATCATCTC+CGG | + | chr4_4:61844356-61844375 | None:intergenic | 35.0% |
| AACAGCTAGTATGAAGATCA+TGG | - | chr4_4:61844380-61844399 | Msa0693030:intron | 35.0% | |
| TACTAGAGCTTACCCAAATT+TGG | - | chr4_4:61844437-61844456 | Msa0693030:CDS | 35.0% | |
| AGCTTACCCAAATTTGGTAT+TGG | - | chr4_4:61844443-61844462 | Msa0693030:CDS | 35.0% | |
| !! | TACCCAAATTTGGTATTGGT+TGG | - | chr4_4:61844447-61844466 | Msa0693030:CDS | 35.0% |
| !! | ACCCAAATTTGGTATTGGTT+GGG | - | chr4_4:61844448-61844467 | Msa0693030:CDS | 35.0% |
| ! | ATCTCCTTTGAAAATGGAAC+GGG | + | chr4_4:61844633-61844652 | None:intergenic | 35.0% |
| ! | GATCTCCTTTGAAAATGGAA+CGG | + | chr4_4:61844634-61844653 | None:intergenic | 35.0% |
| ACACGATGCAAAATACTAGA+CGG | - | chr4_4:61844676-61844695 | Msa0693030:CDS | 35.0% | |
| !! | TTTTGTTTGCATGGATAGGA+AGG | - | chr4_4:61844825-61844844 | Msa0693030:five_prime_UTR | 35.0% |
| GGTTTGGATGAAGAAGAGAA+TGG | + | chr4_4:61836771-61836790 | None:intergenic | 40.0% | |
| TAACAGTGAGATGAACCTTG+GGG | + | chr4_4:61836819-61836838 | None:intergenic | 40.0% | |
| GTAACAGTGAGATGAACCTT+GGG | + | chr4_4:61836820-61836839 | None:intergenic | 40.0% | |
| AGAATGGAAACCAGGTTCAT+CGG | + | chr4_4:61837019-61837038 | None:intergenic | 40.0% | |
| CTTTGGTATTGCAGGTACAT+CGG | - | chr4_4:61837104-61837123 | Msa0693030:intron | 40.0% | |
| ! | TTTTCGTCTCGAGTCAATGA+TGG | - | chr4_4:61837183-61837202 | Msa0693030:CDS | 40.0% |
| ! | CGAGTCAATGATGGAATTTG+CGG | - | chr4_4:61837192-61837211 | Msa0693030:CDS | 40.0% |
| ! | CATAGCGATAATGGTTATCG+TGG | - | chr4_4:61837280-61837299 | Msa0693030:intron | 40.0% |
| AATGTGTGTGACCTCAATTG+CGG | - | chr4_4:61837316-61837335 | Msa0693030:CDS | 40.0% | |
| AGTTGTCAAAACCGCAATTG+AGG | + | chr4_4:61837330-61837349 | None:intergenic | 40.0% | |
| ATATCACACTGCACAGATTG+TGG | - | chr4_4:61837362-61837381 | Msa0693030:intron | 40.0% | |
| ! | TTTAGGTTCGTCGCTAAAGT+CGG | + | chr4_4:61837410-61837429 | None:intergenic | 40.0% |
| TTAGCGACGAACCTAAAACT+AGG | - | chr4_4:61837413-61837432 | Msa0693030:intron | 40.0% | |
| TAGCGACGAACCTAAAACTA+GGG | - | chr4_4:61837414-61837433 | Msa0693030:intron | 40.0% | |
| GAACCTAAAACTAGGGACAA+GGG | - | chr4_4:61837421-61837440 | Msa0693030:intron | 40.0% | |
| !! | TTTCCCTTGTCCCTAGTTTT+AGG | + | chr4_4:61837427-61837446 | None:intergenic | 40.0% |
| GGATAGGTATAGATACGCAT+AGG | - | chr4_4:61837479-61837498 | Msa0693030:CDS | 40.0% | |
| AAGGGACCGATAACAACATA+AGG | + | chr4_4:61837879-61837898 | None:intergenic | 40.0% | |
| CTACAGGCTAGCAGTTAATT+GGG | + | chr4_4:61837994-61838013 | None:intergenic | 40.0% | |
| ACTACAGGCTAGCAGTTAAT+TGG | + | chr4_4:61837995-61838014 | None:intergenic | 40.0% | |
| CTAGAAACTGCACAAACTAC+AGG | + | chr4_4:61838010-61838029 | None:intergenic | 40.0% | |
| AGCAATCTAAACATAACGGC+AGG | + | chr4_4:61838075-61838094 | None:intergenic | 40.0% | |
| ! | AAAGTGCCCAAATACATGCT+GGG | - | chr4_4:61838126-61838145 | Msa0693030:intron | 40.0% |
| AGCAATTGAACACGCACATT+TGG | - | chr4_4:61838225-61838244 | Msa0693030:intron | 40.0% | |
| GGGGTTGTGAAACAGTTAAA+AGG | - | chr4_4:61838307-61838326 | Msa0693030:CDS | 40.0% | |
| GGAAATCTGATTAGGAAAGC+AGG | - | chr4_4:61838557-61838576 | Msa0693030:intron | 40.0% | |
| TCTCCCATTGTAAAACAGAC+AGG | + | chr4_4:61838782-61838801 | None:intergenic | 40.0% | |
| ! | TGTCTGTTTTACAATGGGAG+AGG | - | chr4_4:61838781-61838800 | Msa0693030:intron | 40.0% |
| AGAACAAATAGACAAGGCTG+AGG | - | chr4_4:61839046-61839065 | Msa0693030:CDS | 40.0% | |
| AATAGACAAGGCTGAGGAAA+AGG | - | chr4_4:61839052-61839071 | Msa0693030:CDS | 40.0% | |
| AGAAGAGAAACAGAAGAAGG+AGG | - | chr4_4:61839094-61839113 | Msa0693030:CDS | 40.0% | |
| AGACATCAAAGACAATTCCG+CGG | - | chr4_4:61839196-61839215 | Msa0693030:CDS | 40.0% | |
| TTTCTCATGAATACTTGCCG+CGG | + | chr4_4:61839216-61839235 | None:intergenic | 40.0% | |
| TACAATCGAACCTGATCAAC+CGG | + | chr4_4:61839260-61839279 | None:intergenic | 40.0% | |
| ! | CGCATTAACAATCTGGAATC+TGG | - | chr4_4:61839356-61839375 | Msa0693030:intron | 40.0% |
| GGCATTCAGCTAATATGAAG+TGG | - | chr4_4:61839377-61839396 | Msa0693030:intron | 40.0% | |
| TTATCATCCTCCTAGGAGTT+AGG | - | chr4_4:61839429-61839448 | Msa0693030:intron | 40.0% | |
| TAGTAAACCTCCTAACTCCT+AGG | + | chr4_4:61839442-61839461 | None:intergenic | 40.0% | |
| AGAGAAATAATATGCCCCAG+TGG | + | chr4_4:61839572-61839591 | None:intergenic | 40.0% | |
| TGTTTCACTACTCCATCATG+TGG | - | chr4_4:61839631-61839650 | Msa0693030:intron | 40.0% | |
| TTAAACCACTGACCACATGA+TGG | + | chr4_4:61839646-61839665 | None:intergenic | 40.0% | |
| TCCTTCACTTTCAGAATCAG+TGG | + | chr4_4:61839751-61839770 | None:intergenic | 40.0% | |
| ATCTAATGAACACACATGGC+AGG | + | chr4_4:61839863-61839882 | None:intergenic | 40.0% | |
| AGAATGCAAAAGAAGCTGAG+AGG | - | chr4_4:61839925-61839944 | Msa0693030:intron | 40.0% | |
| GAATGCAAAAGAAGCTGAGA+GGG | - | chr4_4:61839926-61839945 | Msa0693030:intron | 40.0% | |
| TTCGTTATGAGACCATTCAC+TGG | + | chr4_4:61840264-61840283 | None:intergenic | 40.0% | |
| TTGGATGAAAGGAAACACTG+GGG | - | chr4_4:61840427-61840446 | Msa0693030:intron | 40.0% | |
| TTGAAACAATACCTCCCTTG+TGG | - | chr4_4:61840494-61840513 | Msa0693030:intron | 40.0% | |
| ! | TTTTGTCGTCGTACAAAGTC+AGG | + | chr4_4:61840781-61840800 | None:intergenic | 40.0% |
| ATTGTAGAAGGGGAAATCCT+AGG | + | chr4_4:61841002-61841021 | None:intergenic | 40.0% | |
| GGAGAATACATGAATAGAGG+AGG | + | chr4_4:61841071-61841090 | None:intergenic | 40.0% | |
| TGGCTGGGAGCAAATTAATA+GGG | + | chr4_4:61841337-61841356 | None:intergenic | 40.0% | |
| TTGGCTGGGAGCAAATTAAT+AGG | + | chr4_4:61841338-61841357 | None:intergenic | 40.0% | |
| !!! | TTGTTTTAGCTCTGTTGGCT+GGG | + | chr4_4:61841352-61841371 | None:intergenic | 40.0% |
| !!! | TTTGTTTTAGCTCTGTTGGC+TGG | + | chr4_4:61841353-61841372 | None:intergenic | 40.0% |
| AACACAACAAGAGAGTCAGT+CGG | - | chr4_4:61841394-61841413 | Msa0693030:intron | 40.0% | |
| GTGCTGCAAGTAAAAAAGCT+CGG | + | chr4_4:61841545-61841564 | None:intergenic | 40.0% | |
| AGGTCTCACACCAACAAAAT+AGG | - | chr4_4:61841602-61841621 | Msa0693030:intron | 40.0% | |
| GGTCTCACACCAACAAAATA+GGG | - | chr4_4:61841603-61841622 | Msa0693030:intron | 40.0% | |
| GAAATAGTCTCAGGTCTATC+AGG | - | chr4_4:61841625-61841644 | Msa0693030:intron | 40.0% | |
| GGTCTATCAGGTTTCAGATT+AGG | - | chr4_4:61841637-61841656 | Msa0693030:intron | 40.0% | |
| !! | ATTGATAATGTGCTAGGGCT+AGG | - | chr4_4:61841667-61841686 | Msa0693030:CDS | 40.0% |
| AATGGGGACCAAACAAATGT+TGG | - | chr4_4:61841724-61841743 | Msa0693030:intron | 40.0% | |
| TTCAGGGATAGGAACAATCA+TGG | - | chr4_4:61841811-61841830 | Msa0693030:intron | 40.0% | |
| TACTTGTATTCGAGACTGCA+AGG | + | chr4_4:61841895-61841914 | None:intergenic | 40.0% | |
| ! | GAAGCATCTGAGAATACTGA+TGG | - | chr4_4:61842150-61842169 | Msa0693030:intron | 40.0% |
| TGTCAAAGGAAGAATTAGGC+AGG | - | chr4_4:61842175-61842194 | Msa0693030:CDS | 40.0% | |
| CTCTACGTCAGATTTGTATG+AGG | + | chr4_4:61842415-61842434 | None:intergenic | 40.0% | |
| ! | GGGTGTCTGGAATATATTGA+CGG | + | chr4_4:61842609-61842628 | None:intergenic | 40.0% |
| ! | ATGTCTACCTGACTGATTCA+CGG | + | chr4_4:61842630-61842649 | None:intergenic | 40.0% |
| GTATTGTGGAGGTTTAGTTG+TGG | - | chr4_4:61842862-61842881 | Msa0693030:intron | 40.0% | |
| TGGAGGTTTAGTTGTGGAAT+TGG | - | chr4_4:61842868-61842887 | Msa0693030:intron | 40.0% | |
| AGAAAGTGAGATGACGAGAT+AGG | + | chr4_4:61843063-61843082 | None:intergenic | 40.0% | |
| TATCTCGTCATCTCACTTTC+TGG | - | chr4_4:61843062-61843081 | Msa0693030:intron | 40.0% | |
| ATCTCGTCATCTCACTTTCT+GGG | - | chr4_4:61843063-61843082 | Msa0693030:intron | 40.0% | |
| TACCAAAACCTTACCCCAAA+CGG | + | chr4_4:61843167-61843186 | None:intergenic | 40.0% | |
| AATGGTGATCATTGCTGGAA+CGG | - | chr4_4:61843359-61843378 | Msa0693030:intron | 40.0% | |
| CATACCTTCAAACTCCTATC+AGG | + | chr4_4:61843386-61843405 | None:intergenic | 40.0% | |
| !! | CTTGGTGACTTTTGCAACAT+TGG | - | chr4_4:61843705-61843724 | Msa0693030:intron | 40.0% |
| ! | TGAAAGGTGGTTTGGATTTG+TGG | - | chr4_4:61843827-61843846 | Msa0693030:intron | 40.0% |
| GAACAGGTCAAGCTAAAATG+CGG | - | chr4_4:61843906-61843925 | Msa0693030:intron | 40.0% | |
| AACAGGTCAAGCTAAAATGC+GGG | - | chr4_4:61843907-61843926 | Msa0693030:intron | 40.0% | |
| ATAACAATCCCTACTCGCAA+CGG | + | chr4_4:61843968-61843987 | None:intergenic | 40.0% | |
| ! | TTTTCCTGATTGCTGTCTCA+TGG | - | chr4_4:61844055-61844074 | Msa0693030:intron | 40.0% |
| TTTCCTGATTGCTGTCTCAT+GGG | - | chr4_4:61844056-61844075 | Msa0693030:intron | 40.0% | |
| !! | TGGCAGGTATGTAGCTTTAT+TGG | - | chr4_4:61844084-61844103 | Msa0693030:intron | 40.0% |
| ! | CAGCTTTTCTTCCTGACAAA+GGG | + | chr4_4:61844119-61844138 | None:intergenic | 40.0% |
| ! | TCAGCTTTTCTTCCTGACAA+AGG | + | chr4_4:61844120-61844139 | None:intergenic | 40.0% |
| TTGTCAGGAAGAAAAGCTGA+AGG | - | chr4_4:61844120-61844139 | Msa0693030:intron | 40.0% | |
| TAGTGACTGTGGAATGTAAC+AGG | - | chr4_4:61844201-61844220 | Msa0693030:intron | 40.0% | |
| CAAGCTAGACCTACTGAATT+CGG | - | chr4_4:61844234-61844253 | Msa0693030:CDS | 40.0% | |
| CCCCAACCAATACCAAATTT+GGG | + | chr4_4:61844452-61844471 | None:intergenic | 40.0% | |
| !! | CCCAAATTTGGTATTGGTTG+GGG | - | chr4_4:61844449-61844468 | Msa0693030:CDS | 40.0% |
| ACCCCAACCAATACCAAATT+TGG | + | chr4_4:61844453-61844472 | None:intergenic | 40.0% | |
| !! | ATTTGGTATTGGTTGGGGTT+AGG | - | chr4_4:61844454-61844473 | Msa0693030:CDS | 40.0% |
| !! | TTTGGTATTGGTTGGGGTTA+GGG | - | chr4_4:61844455-61844474 | Msa0693030:CDS | 40.0% |
| TCCTTATGTCTCATCTGGTT+TGG | - | chr4_4:61844519-61844538 | Msa0693030:intron | 40.0% | |
| ! | ATTGCCCGTTCCATTTTCAA+AGG | - | chr4_4:61844626-61844645 | Msa0693030:CDS | 40.0% |
| CACACTAGAACGGTATAAGA+TGG | + | chr4_4:61844786-61844805 | None:intergenic | 40.0% | |
| GTCTAGGAATCACACTAGAA+CGG | + | chr4_4:61844796-61844815 | None:intergenic | 40.0% | |
| CGATACGCTAGTGTCCATAA+CGG | - | chr4_4:61836621-61836640 | Msa0693030:three_prime_UTR | 45.0% | |
| GATACGCTAGTGTCCATAAC+GGG | - | chr4_4:61836622-61836641 | Msa0693030:three_prime_UTR | 45.0% | |
| AAACCCAAAGACCCATTCCT+CGG | - | chr4_4:61836786-61836805 | Msa0693030:three_prime_UTR | 45.0% | |
| ATTCCGAGGAATGGGTCTTT+GGG | + | chr4_4:61836792-61836811 | None:intergenic | 45.0% | |
| GGTAACAGTGAGATGAACCT+TGG | + | chr4_4:61836821-61836840 | None:intergenic | 45.0% | |
| ! | GAAATGACGATGACGGTTAC+TGG | - | chr4_4:61836876-61836895 | Msa0693030:three_prime_UTR | 45.0% |
| !! | TCATGTGGCTTTGGTATTGC+AGG | - | chr4_4:61837096-61837115 | Msa0693030:intron | 45.0% |
| CGACAGTAAAATGTTCCACG+CGG | + | chr4_4:61837135-61837154 | None:intergenic | 45.0% | |
| AGACGAAAACAGAGACACAG+GGG | + | chr4_4:61837172-61837191 | None:intergenic | 45.0% | |
| GAGACGAAAACAGAGACACA+GGG | + | chr4_4:61837173-61837192 | None:intergenic | 45.0% | |
| CACTGCACAGATTGTGGTTA+TGG | - | chr4_4:61837368-61837387 | Msa0693030:intron | 45.0% | |
| TTAGGTTCGTCGCTAAAGTC+GGG | + | chr4_4:61837409-61837428 | None:intergenic | 45.0% | |
| CGAACCTAAAACTAGGGACA+AGG | - | chr4_4:61837420-61837439 | Msa0693030:intron | 45.0% | |
| ! | CAAAGTGCCCAAATACATGC+TGG | - | chr4_4:61838125-61838144 | Msa0693030:intron | 45.0% |
| TTTGACGCCCTCTTGATATG+TGG | + | chr4_4:61838194-61838213 | None:intergenic | 45.0% | |
| GCTAGATTAGGCGTCTTCTT+TGG | - | chr4_4:61838611-61838630 | Msa0693030:intron | 45.0% | |
| !! | GGAAAAGGAGCGTTTACAGA+AGG | - | chr4_4:61839067-61839086 | Msa0693030:CDS | 45.0% |
| TGAAGTTAAAGAGGGCTCTC+CGG | - | chr4_4:61839238-61839257 | Msa0693030:CDS | 45.0% | |
| TAAACCTCCTAACTCCTAGG+AGG | + | chr4_4:61839439-61839458 | None:intergenic | 45.0% | |
| !! | GCCACTGATTCTGAAAGTGA+AGG | - | chr4_4:61839747-61839766 | Msa0693030:intron | 45.0% |
| CTACGCAGATACCGTATTGA+TGG | + | chr4_4:61840012-61840031 | None:intergenic | 45.0% | |
| TGAAGTCAGACACCAGTGAA+TGG | - | chr4_4:61840249-61840268 | Msa0693030:intron | 45.0% | |
| !! | GAGGATTAGAAGCACCACAA+GGG | + | chr4_4:61840511-61840530 | None:intergenic | 45.0% |
| !! | AGAGGATTAGAAGCACCACA+AGG | + | chr4_4:61840512-61840531 | None:intergenic | 45.0% |
| GGTTCCTAACACACTCACAA+TGG | + | chr4_4:61840922-61840941 | None:intergenic | 45.0% | |
| TAGAAGGGGAAATCCTAGGA+GGG | + | chr4_4:61840998-61841017 | None:intergenic | 45.0% | |
| TGCTCAAAGATGCAGAGTCA+AGG | - | chr4_4:61841508-61841527 | Msa0693030:intron | 45.0% | |
| TGCTCCACCAACTGGAAAAT+GGG | - | chr4_4:61841707-61841726 | Msa0693030:CDS | 45.0% | |
| ! | TTTGGTCCCCATTTTCCAGT+TGG | + | chr4_4:61841717-61841736 | None:intergenic | 45.0% |
| ! | TCGAGACTGCAAGGAGTATA+AGG | + | chr4_4:61841886-61841905 | None:intergenic | 45.0% |
| ! | TGTCTACCTGACTGATTCAC+GGG | + | chr4_4:61842629-61842648 | None:intergenic | 45.0% |
| CAAAGTCTGCCCCTATAAAC+AGG | - | chr4_4:61843113-61843132 | Msa0693030:CDS | 45.0% | |
| !! | TCCTGGCTAGCCTGTTTATA+GGG | + | chr4_4:61843126-61843145 | None:intergenic | 45.0% |
| ACCAAAACCTTACCCCAAAC+GGG | + | chr4_4:61843166-61843185 | None:intergenic | 45.0% | |
| ! | AGTTTTCTTTTCACAGGCGC+TGG | - | chr4_4:61843297-61843316 | Msa0693030:CDS | 45.0% |
| ! | GTTTTCTTTTCACAGGCGCT+GGG | - | chr4_4:61843298-61843317 | Msa0693030:CDS | 45.0% |
| AAAGCTACATACCTGCCATG+AGG | + | chr4_4:61844082-61844101 | None:intergenic | 45.0% | |
| TTTCTTCCTGACAAAGGGCT+GGG | + | chr4_4:61844114-61844133 | None:intergenic | 45.0% | |
| ! | TTTTCTTCCTGACAAAGGGC+TGG | + | chr4_4:61844115-61844134 | None:intergenic | 45.0% |
| CTGGTTGTTCCGAATTCAGT+AGG | + | chr4_4:61844246-61844265 | None:intergenic | 45.0% | |
| GCCAAACCAGATGAGACATA+AGG | + | chr4_4:61844523-61844542 | None:intergenic | 45.0% | |
| CACAATGACTACTTGGTCTG+TGG | - | chr4_4:61844592-61844611 | Msa0693030:intron | 45.0% | |
| AAATGGAACGGGCAATCTGA+AGG | + | chr4_4:61844622-61844641 | None:intergenic | 45.0% | |
| GCGACAGAAAAGTCCCGTTA+TGG | + | chr4_4:61836638-61836657 | None:intergenic | 50.0% | |
| ACGCGAGGAGAAGAGAAATG+AGG | + | chr4_4:61836740-61836759 | None:intergenic | 50.0% | |
| ! | GAGGAATGGGTCTTTGGGTT+TGG | + | chr4_4:61836787-61836806 | None:intergenic | 50.0% |
| GATTCCGAGGAATGGGTCTT+TGG | + | chr4_4:61836793-61836812 | None:intergenic | 50.0% | |
| CGAGACGAAAACAGAGACAC+AGG | + | chr4_4:61837174-61837193 | None:intergenic | 50.0% | |
| GCAGTGCAACAAGACGAGTA+TGG | - | chr4_4:61837847-61837866 | Msa0693030:intron | 50.0% | |
| CAGCCTCCCAGCATGTATTT+GGG | + | chr4_4:61838135-61838154 | None:intergenic | 50.0% | |
| CAAATACATGCTGGGAGGCT+GGG | - | chr4_4:61838134-61838153 | Msa0693030:intron | 50.0% | |
| ! | TGAACACGCACATTTGGCTC+TGG | - | chr4_4:61838231-61838250 | Msa0693030:intron | 50.0% |
| !! | TTTGGCTCTGGAGAAGGATG+AGG | - | chr4_4:61838243-61838262 | Msa0693030:intron | 50.0% |
| AAATAGATGGGTGTGGGCAC+CGG | + | chr4_4:61838718-61838737 | None:intergenic | 50.0% | |
| TGGCACTACTTTGTCACGTC+TGG | + | chr4_4:61838753-61838772 | None:intergenic | 50.0% | |
| GAAACAGAAGAAGGAGGCTG+AGG | - | chr4_4:61839100-61839119 | Msa0693030:CDS | 50.0% | |
| GAAGAAGGAGGCTGAGGAAA+AGG | - | chr4_4:61839106-61839125 | Msa0693030:CDS | 50.0% | |
| TCATCCTCCTAGGAGTTAGG+AGG | - | chr4_4:61839432-61839451 | Msa0693030:intron | 50.0% | |
| CTACTCCATCATGTGGTCAG+TGG | - | chr4_4:61839638-61839657 | Msa0693030:intron | 50.0% | |
| !! | GGTCATAATGAGGTACCGGT+AGG | - | chr4_4:61840134-61840153 | Msa0693030:intron | 50.0% |
| !! | GATTAGAAGCACCACAAGGG+AGG | + | chr4_4:61840508-61840527 | None:intergenic | 50.0% |
| GTAGAAGGGGAAATCCTAGG+AGG | + | chr4_4:61840999-61841018 | None:intergenic | 50.0% | |
| ! | TACCTGAAACCTTGGTGCAG+TGG | + | chr4_4:61841575-61841594 | None:intergenic | 50.0% |
| TGCGATGCTACCTGAAACCT+TGG | + | chr4_4:61841583-61841602 | None:intergenic | 50.0% | |
| ! | AAGGTTTCAGGTAGCATCGC+AGG | - | chr4_4:61841582-61841601 | Msa0693030:intron | 50.0% |
| TGATTACCTGCTCCACCAAC+TGG | - | chr4_4:61841699-61841718 | Msa0693030:CDS | 50.0% | |
| !!! | CATTTTCCAGTTGGTGGAGC+AGG | + | chr4_4:61841708-61841727 | None:intergenic | 50.0% |
| CTGCTCCACCAACTGGAAAA+TGG | - | chr4_4:61841706-61841725 | Msa0693030:CDS | 50.0% | |
| GCTCCACCAACTGGAAAATG+GGG | - | chr4_4:61841708-61841727 | Msa0693030:CDS | 50.0% | |
| ! | TGGAGTATCTCTGGTTCCCA+CGG | - | chr4_4:61841744-61841763 | Msa0693030:intron | 50.0% |
| ! | CTTGTTGCTTCACGTTGGAC+AGG | - | chr4_4:61842198-61842217 | Msa0693030:CDS | 50.0% |
| CGTTGGACAGGAGAAGATGT+TGG | - | chr4_4:61842210-61842229 | Msa0693030:CDS | 50.0% | |
| ! | TCTGAAACTGACGACGACAC+CGG | - | chr4_4:61842327-61842346 | Msa0693030:CDS | 50.0% |
| GAGAGTGAACCAGACTTGTC+AGG | - | chr4_4:61842432-61842451 | Msa0693030:intron | 50.0% | |
| AGATGCTGCTCGTATACGCA+AGG | - | chr4_4:61842718-61842737 | Msa0693030:intron | 50.0% | |
| CAATGCTACAGGTCCAGCAA+AGG | - | chr4_4:61842915-61842934 | Msa0693030:intron | 50.0% | |
| !! | CCTGGCTAGCCTGTTTATAG+GGG | + | chr4_4:61843125-61843144 | None:intergenic | 50.0% |
| !! | CTCCTGGCTAGCCTGTTTAT+AGG | + | chr4_4:61843127-61843146 | None:intergenic | 50.0% |
| ! | CTATAAACAGGCTAGCCAGG+AGG | - | chr4_4:61843125-61843144 | Msa0693030:CDS | 50.0% |
| AAAACCTTACCCCAAACGGG+TGG | + | chr4_4:61843163-61843182 | None:intergenic | 50.0% | |
| !! | ACCCGTTTGGGGTAAGGTTT+TGG | - | chr4_4:61843162-61843181 | Msa0693030:CDS | 50.0% |
| ATTGCTGGAACGGTCCTGAT+AGG | - | chr4_4:61843369-61843388 | Msa0693030:intron | 50.0% | |
| CGGTCCTGATAGGAGTTTGA+AGG | - | chr4_4:61843379-61843398 | Msa0693030:intron | 50.0% | |
| CTAGTCTGTGGGGTTTCTCA+TGG | - | chr4_4:61843793-61843812 | Msa0693030:intron | 50.0% | |
| TTCTTCCTGACAAAGGGCTG+GGG | + | chr4_4:61844113-61844132 | None:intergenic | 50.0% | |
| CACAACTCATCACGGCTTTC+TGG | + | chr4_4:61844265-61844284 | None:intergenic | 50.0% | |
| ! | ACTAGGAGCGTGTTTGGCTT+TGG | - | chr4_4:61844488-61844507 | Msa0693030:CDS | 50.0% |
| !! | CTAGGAGCGTGTTTGGCTTT+GGG | - | chr4_4:61844489-61844508 | Msa0693030:CDS | 50.0% |
| !! | AGCGTGTTTGGCTTTGGGTT+GGG | - | chr4_4:61844494-61844513 | Msa0693030:CDS | 50.0% |
| GGGAGTCCTTATGTCTCATC+TGG | - | chr4_4:61844514-61844533 | Msa0693030:intron | 50.0% | |
| AGAATGGGACGAGAAACGCG+AGG | + | chr4_4:61836755-61836774 | None:intergenic | 55.0% | |
| GATTTCTGCGATTGCCCCGA+TGG | - | chr4_4:61836991-61837010 | Msa0693030:three_prime_UTR | 55.0% | |
| !! | ACCAGGTTCATCGGTGCCAT+CGG | + | chr4_4:61837010-61837029 | None:intergenic | 55.0% |
| GTGCCCAAATACATGCTGGG+AGG | - | chr4_4:61838129-61838148 | Msa0693030:intron | 55.0% | |
| CCAGCCTCCCAGCATGTATT+TGG | + | chr4_4:61838136-61838155 | None:intergenic | 55.0% | |
| CCAAATACATGCTGGGAGGC+TGG | - | chr4_4:61838133-61838152 | Msa0693030:intron | 55.0% | |
| !! | CGCACATTTGGCTCTGGAGA+AGG | - | chr4_4:61838237-61838256 | Msa0693030:intron | 55.0% |
| AATAGATGGGTGTGGGCACC+GGG | + | chr4_4:61838717-61838736 | None:intergenic | 55.0% | |
| ! | ACCCATCCATCTGTGCCACT+GGG | - | chr4_4:61839554-61839573 | Msa0693030:intron | 55.0% |
| ATATGCCCCAGTGGCACAGA+TGG | + | chr4_4:61839563-61839582 | None:intergenic | 55.0% | |
| ACCACAAGTCCACTGCACCA+AGG | - | chr4_4:61841563-61841582 | Msa0693030:intron | 55.0% | |
| ! | ACCTTGGTGCAGTGGACTTG+TGG | + | chr4_4:61841567-61841586 | None:intergenic | 55.0% |
| GTCCACTGCACCAAGGTTTC+AGG | - | chr4_4:61841570-61841589 | Msa0693030:intron | 55.0% | |
| ! | GGTCCCCATTTTCCAGTTGG+TGG | + | chr4_4:61841714-61841733 | None:intergenic | 55.0% |
| TTCCCACGGATTCCATGAGC+TGG | - | chr4_4:61841758-61841777 | Msa0693030:intron | 55.0% | |
| TGCCAGCTCATGGAATCCGT+GGG | + | chr4_4:61841763-61841782 | None:intergenic | 55.0% | |
| !! | GCAGGCTTGTTGCTTCACGT+TGG | - | chr4_4:61842193-61842212 | Msa0693030:CDS | 55.0% |
| GCACAACAGATGACCCTTCG+TGG | - | chr4_4:61842543-61842562 | Msa0693030:intron | 55.0% | |
| ! | CTGACTGATTCACGGGTGTC+TGG | + | chr4_4:61842622-61842641 | None:intergenic | 55.0% |
| CAGACACCCGTGAATCAGTC+AGG | - | chr4_4:61842620-61842639 | Msa0693030:intron | 55.0% | |
| ! | CCCCTATAAACAGGCTAGCC+AGG | - | chr4_4:61843122-61843141 | Msa0693030:CDS | 55.0% |
| ! | TAAACAGGCTAGCCAGGAGG+AGG | - | chr4_4:61843128-61843147 | Msa0693030:CDS | 55.0% |
| ! | AAACAGGCTAGCCAGGAGGA+GGG | - | chr4_4:61843129-61843148 | Msa0693030:CDS | 55.0% |
| !! | CAGGCGCTGGGACAAATTTG+AGG | - | chr4_4:61843310-61843329 | Msa0693030:CDS | 55.0% |
| TGAACCAAGCCGTTGCGAGT+AGG | - | chr4_4:61843956-61843975 | Msa0693030:intron | 55.0% | |
| GAACCAAGCCGTTGCGAGTA+GGG | - | chr4_4:61843957-61843976 | Msa0693030:intron | 55.0% | |
| AATCCCTACTCGCAACGGCT+TGG | + | chr4_4:61843963-61843982 | None:intergenic | 55.0% | |
| AGGCCCATGAGACAGCAATC+AGG | + | chr4_4:61844062-61844081 | None:intergenic | 55.0% | |
| TTGCTGTCTCATGGGCCTCA+TGG | - | chr4_4:61844064-61844083 | Msa0693030:intron | 55.0% | |
| GTTAGGGAGCTCCTAGGACT+AGG | - | chr4_4:61844471-61844490 | Msa0693030:CDS | 55.0% | |
| CCAAACACGCTCCTAGTCCT+AGG | + | chr4_4:61844485-61844504 | None:intergenic | 55.0% | |
| ! | CCTAGGACTAGGAGCGTGTT+TGG | - | chr4_4:61844482-61844501 | Msa0693030:CDS | 55.0% |
| !! | GAGCGTGTTTGGCTTTGGGT+TGG | - | chr4_4:61844493-61844512 | Msa0693030:CDS | 55.0% |
| GGGGAGCGATTCCGAGGAAT+GGG | + | chr4_4:61836800-61836819 | None:intergenic | 60.0% | |
| TGGGGAGCGATTCCGAGGAA+TGG | + | chr4_4:61836801-61836820 | None:intergenic | 60.0% | |
| TTCCTCGGAATCGCTCCCCA+AGG | - | chr4_4:61836801-61836820 | Msa0693030:three_prime_UTR | 60.0% | |
| AACCTTGGGGAGCGATTCCG+AGG | + | chr4_4:61836806-61836825 | None:intergenic | 60.0% | |
| !! | CAGGTTCATCGGTGCCATCG+GGG | + | chr4_4:61837008-61837027 | None:intergenic | 60.0% |
| !! | CCAGGTTCATCGGTGCCATC+GGG | + | chr4_4:61837009-61837028 | None:intergenic | 60.0% |
| AGAGGGCTCTCCGGTTGATC+AGG | - | chr4_4:61839247-61839266 | Msa0693030:CDS | 60.0% | |
| CACCCATCCATCTGTGCCAC+TGG | - | chr4_4:61839553-61839572 | Msa0693030:intron | 60.0% | |
| CCCCAGTGGCACAGATGGAT+GGG | + | chr4_4:61839558-61839577 | None:intergenic | 60.0% | |
| ! | CCCATCCATCTGTGCCACTG+GGG | - | chr4_4:61839555-61839574 | Msa0693030:intron | 60.0% |
| CGAGTGATGTGACCTGCGAG+TGG | + | chr4_4:61841463-61841482 | None:intergenic | 60.0% | |
| GTGCCAGCTCATGGAATCCG+TGG | + | chr4_4:61841764-61841783 | None:intergenic | 60.0% | |
| GGTGGGATTGTGCCAGCTCA+TGG | + | chr4_4:61841773-61841792 | None:intergenic | 60.0% | |
| GGCCATTCCACCACCCGTTT+GGG | - | chr4_4:61843150-61843169 | Msa0693030:CDS | 60.0% | |
| GCCATTCCACCACCCGTTTG+GGG | - | chr4_4:61843151-61843170 | Msa0693030:CDS | 60.0% | |
| !! | ACCCCAAACGGGTGGTGGAA+TGG | + | chr4_4:61843155-61843174 | None:intergenic | 60.0% |
| ! | TCCACCACCCGTTTGGGGTA+AGG | - | chr4_4:61843156-61843175 | Msa0693030:CDS | 60.0% |
| ACCTTACCCCAAACGGGTGG+TGG | + | chr4_4:61843160-61843179 | None:intergenic | 60.0% | |
| TGTCTCATGGGCCTCATGGC+AGG | - | chr4_4:61844068-61844087 | Msa0693030:intron | 60.0% | |
| TTCCTGACAAAGGGCTGGGG+TGG | + | chr4_4:61844110-61844129 | None:intergenic | 60.0% | |
| GTTGGGGTTAGGGAGCTCCT+AGG | - | chr4_4:61844465-61844484 | Msa0693030:CDS | 60.0% | |
| !! | CCCGATGGCACCGATGAACC+TGG | - | chr4_4:61837006-61837025 | Msa0693030:three_prime_UTR | 65.0% |
| GCCCCAGTGGCACAGATGGA+TGG | + | chr4_4:61839559-61839578 | None:intergenic | 65.0% | |
| TGGTGGAATGGCCCTCCTCC+TGG | + | chr4_4:61843143-61843162 | None:intergenic | 65.0% | |
| GGGCCATTCCACCACCCGTT+TGG | - | chr4_4:61843149-61843168 | Msa0693030:CDS | 65.0% | |
| GGTACATCGGCGTGTCCGCG+TGG | - | chr4_4:61837117-61837136 | Msa0693030:intron | 70.0% | |
| GGCCACCCCAGCCCTTTGTC+AGG | - | chr4_4:61844105-61844124 | Msa0693030:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 61836452 | 61844985 | 61836452 | ID=Msa0693030;Name=Msa0693030 |
| chr4_4 | mRNA | 61836452 | 61844985 | 61836452 | ID=Msa0693030-mRNA-1;Parent=Msa0693030;Name=Msa0693030-mRNA-1;_AED=0.12;_eAED=0.12;_QI=262|1|1|1|0.93|0.88|17|623|629 |
| chr4_4 | exon | 61836452 | 61837052 | 61836452 | ID=Msa0693030-mRNA-1:exon:17219;Parent=Msa0693030-mRNA-1 |
| chr4_4 | exon | 61837130 | 61837214 | 61837130 | ID=Msa0693030-mRNA-1:exon:17218;Parent=Msa0693030-mRNA-1 |
| chr4_4 | exon | 61837296 | 61837347 | 61837296 | ID=Msa0693030-mRNA-1:exon:17217;Parent=Msa0693030-mRNA-1 |
| chr4_4 | exon | 61837464 | 61837525 | 61837464 | ID=Msa0693030-mRNA-1:exon:17216;Parent=Msa0693030-mRNA-1 |
| chr4_4 | exon | 61838037 | 61838124 | 61838037 | ID=Msa0693030-mRNA-1:exon:17215;Parent=Msa0693030-mRNA-1 |
| chr4_4 | exon | 61838265 | 61838333 | 61838265 | ID=Msa0693030-mRNA-1:exon:17214;Parent=Msa0693030-mRNA-1 |
| chr4_4 | exon | 61838454 | 61838511 | 61838454 | ID=Msa0693030-mRNA-1:exon:17213;Parent=Msa0693030-mRNA-1 |
| chr4_4 | exon | 61838616 | 61838717 | 61838616 | ID=Msa0693030-mRNA-1:exon:17212;Parent=Msa0693030-mRNA-1 |
| chr4_4 | exon | 61838796 | 61838900 | 61838796 | ID=Msa0693030-mRNA-1:exon:17211;Parent=Msa0693030-mRNA-1 |
| chr4_4 | exon | 61838984 | 61839293 | 61838984 | ID=Msa0693030-mRNA-1:exon:17210;Parent=Msa0693030-mRNA-1 |
| chr4_4 | exon | 61841418 | 61841510 | 61841418 | ID=Msa0693030-mRNA-1:exon:17209;Parent=Msa0693030-mRNA-1 |
| chr4_4 | exon | 61841643 | 61841738 | 61841643 | ID=Msa0693030-mRNA-1:exon:17208;Parent=Msa0693030-mRNA-1 |
| chr4_4 | exon | 61842169 | 61842398 | 61842169 | ID=Msa0693030-mRNA-1:exon:17207;Parent=Msa0693030-mRNA-1 |
| chr4_4 | exon | 61843109 | 61843348 | 61843109 | ID=Msa0693030-mRNA-1:exon:17206;Parent=Msa0693030-mRNA-1 |
| chr4_4 | exon | 61844224 | 61844319 | 61844224 | ID=Msa0693030-mRNA-1:exon:17205;Parent=Msa0693030-mRNA-1 |
| chr4_4 | exon | 61844410 | 61844526 | 61844410 | ID=Msa0693030-mRNA-1:exon:17204;Parent=Msa0693030-mRNA-1 |
| chr4_4 | exon | 61844615 | 61844985 | 61844615 | ID=Msa0693030-mRNA-1:exon:17203;Parent=Msa0693030-mRNA-1 |
| chr4_4 | five_prime_UTR | 61844724 | 61844985 | 61844724 | ID=Msa0693030-mRNA-1:five_prime_utr;Parent=Msa0693030-mRNA-1 |
| chr4_4 | CDS | 61844615 | 61844723 | 61844615 | ID=Msa0693030-mRNA-1:cds;Parent=Msa0693030-mRNA-1 |
| chr4_4 | CDS | 61844410 | 61844526 | 61844410 | ID=Msa0693030-mRNA-1:cds;Parent=Msa0693030-mRNA-1 |
| chr4_4 | CDS | 61844224 | 61844319 | 61844224 | ID=Msa0693030-mRNA-1:cds;Parent=Msa0693030-mRNA-1 |
| chr4_4 | CDS | 61843109 | 61843348 | 61843109 | ID=Msa0693030-mRNA-1:cds;Parent=Msa0693030-mRNA-1 |
| chr4_4 | CDS | 61842169 | 61842398 | 61842169 | ID=Msa0693030-mRNA-1:cds;Parent=Msa0693030-mRNA-1 |
| chr4_4 | CDS | 61841643 | 61841738 | 61841643 | ID=Msa0693030-mRNA-1:cds;Parent=Msa0693030-mRNA-1 |
| chr4_4 | CDS | 61841418 | 61841510 | 61841418 | ID=Msa0693030-mRNA-1:cds;Parent=Msa0693030-mRNA-1 |
| chr4_4 | CDS | 61838984 | 61839293 | 61838984 | ID=Msa0693030-mRNA-1:cds;Parent=Msa0693030-mRNA-1 |
| chr4_4 | CDS | 61838796 | 61838900 | 61838796 | ID=Msa0693030-mRNA-1:cds;Parent=Msa0693030-mRNA-1 |
| chr4_4 | CDS | 61838616 | 61838717 | 61838616 | ID=Msa0693030-mRNA-1:cds;Parent=Msa0693030-mRNA-1 |
| chr4_4 | CDS | 61838454 | 61838511 | 61838454 | ID=Msa0693030-mRNA-1:cds;Parent=Msa0693030-mRNA-1 |
| chr4_4 | CDS | 61838265 | 61838333 | 61838265 | ID=Msa0693030-mRNA-1:cds;Parent=Msa0693030-mRNA-1 |
| chr4_4 | CDS | 61838037 | 61838124 | 61838037 | ID=Msa0693030-mRNA-1:cds;Parent=Msa0693030-mRNA-1 |
| chr4_4 | CDS | 61837464 | 61837525 | 61837464 | ID=Msa0693030-mRNA-1:cds;Parent=Msa0693030-mRNA-1 |
| chr4_4 | CDS | 61837296 | 61837347 | 61837296 | ID=Msa0693030-mRNA-1:cds;Parent=Msa0693030-mRNA-1 |
| chr4_4 | CDS | 61837152 | 61837214 | 61837152 | ID=Msa0693030-mRNA-1:cds;Parent=Msa0693030-mRNA-1 |
| chr4_4 | three_prime_UTR | 61837130 | 61837151 | 61837130 | ID=Msa0693030-mRNA-1:three_prime_utr;Parent=Msa0693030-mRNA-1 |
| chr4_4 | three_prime_UTR | 61836452 | 61837052 | 61836452 | ID=Msa0693030-mRNA-1:three_prime_utr;Parent=Msa0693030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
