Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400850 | XP_013456788.1 | 95.031 | 644 | 17 | 2 | 1 | 629 | 1 | 644 | 0.0 | 1231 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400850 | sp|Q9FM96|PSL4_ARATH | 57.188 | 633 | 234 | 13 | 21 | 629 | 28 | 647 | 0.0 | 617 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400850 | A0A072UM12 | 95.031 | 644 | 17 | 2 | 1 | 629 | 1 | 644 | 0.0 | 1231 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0610290 | Msa1400850 | 0.804097 | 2.544463e-49 | -8.615850e-47 |
| Msa0693030 | Msa1400850 | 0.943120 | 2.130069e-102 | -8.615850e-47 |
| Msa0700120 | Msa1400850 | 0.806015 | 1.010046e-49 | -8.615850e-47 |
| Msa0368640 | Msa1400850 | 0.821427 | 4.062005e-53 | -8.615850e-47 |
| Msa1065890 | Msa1400850 | 0.828063 | 1.107228e-54 | -8.615850e-47 |
| Msa0276850 | Msa1400850 | 0.812400 | 4.321094e-51 | -8.615850e-47 |
| Msa0276860 | Msa1400850 | 0.826231 | 3.038052e-54 | -8.615850e-47 |
| Msa1111430 | Msa1400850 | 0.836522 | 8.905525e-57 | -8.615850e-47 |
| Msa0563090 | Msa1400850 | 0.806076 | 9.802955e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400850 | MtrunA17_Chr4g0043321 | 95.031 | 644 | 17 | 2 | 1 | 629 | 1 | 644 | 0.0 | 1231 |
| Msa1400850 | MtrunA17_Chr4g0040841 | 59.836 | 122 | 48 | 1 | 11 | 132 | 8 | 128 | 1.73e-43 | 154 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400850 | AT5G56360.1 | 57.188 | 633 | 234 | 13 | 21 | 629 | 28 | 647 | 0.0 | 617 |
| Msa1400850 | AT2G42390.1 | 58.333 | 132 | 49 | 3 | 1 | 132 | 1 | 126 | 3.37e-45 | 160 |
Find 194 sgRNAs with CRISPR-Local
Find 573 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAACTCATCACGGCTTTC+TGG | 0.130781 | tig0022477:-62049 | None:intergenic |
| ACCCCAACCAATACCAAATT+TGG | 0.133404 | tig0022477:-62237 | None:intergenic |
| AACTCATTCTAACCAAAATT+TGG | 0.181117 | tig0022477:-62502 | None:intergenic |
| CCAGCCTCCCAGCATGTATT+TGG | 0.202598 | tig0022477:-55920 | None:intergenic |
| GAGATTCTAAAACCAAATTT+TGG | 0.212338 | tig0022477:+62490 | Msa1400850:three_prime_UTR |
| TACTAGAGCTTACCCAAATT+TGG | 0.239918 | tig0022477:+62224 | Msa1400850:three_prime_UTR |
| TGACAAAACTGGTACGAATT+TGG | 0.243728 | tig0022477:+54319 | Msa1400850:five_prime_UTR |
| GGCCATTCCACCACCCGTTT+GGG | 0.243752 | tig0022477:+60937 | Msa1400850:CDS |
| AAAGAAGAAAGTATACTTAA+AGG | 0.252920 | tig0022477:+56073 | Msa1400850:CDS |
| ATAAAGATCTCCTTTGAAAA+TGG | 0.255299 | tig0022477:-62423 | None:intergenic |
| GATTCCGAGGAATGGGTCTT+TGG | 0.265562 | tig0022477:-54577 | None:intergenic |
| TGGCAGGTATGTAGCTTTAT+TGG | 0.270461 | tig0022477:+61871 | Msa1400850:intron |
| ATTTGGTATTGGTTGGGGTT+AGG | 0.289117 | tig0022477:+62241 | Msa1400850:three_prime_UTR |
| TCCTGGCTAGCCTGTTTATA+GGG | 0.289800 | tig0022477:-60910 | None:intergenic |
| ACCCAAATTTGGTATTGGTT+GGG | 0.290054 | tig0022477:+62235 | Msa1400850:three_prime_UTR |
| ACTAGGAGCGTGTTTGGCTT+TGG | 0.297811 | tig0022477:+62275 | Msa1400850:three_prime_UTR |
| AATTCCTGTATCTTCTTCAT+TGG | 0.303497 | tig0022477:-56937 | None:intergenic |
| CTAGGAGCGTGTTTGGCTTT+GGG | 0.307074 | tig0022477:+62276 | Msa1400850:three_prime_UTR |
| GAGGAATGGGTCTTTGGGTT+TGG | 0.310876 | tig0022477:-54571 | None:intergenic |
| AAGAAGAAAGTATACTTAAA+GGG | 0.318461 | tig0022477:+56074 | Msa1400850:CDS |
| AATGAATAAAACTCCTTTGC+TGG | 0.318818 | tig0022477:-60715 | None:intergenic |
| GGGCCATTCCACCACCCGTT+TGG | 0.326302 | tig0022477:+60936 | Msa1400850:CDS |
| TTTGGTATTGGTTGGGGTTA+GGG | 0.326745 | tig0022477:+62242 | Msa1400850:three_prime_UTR |
| GCTCTAGTATACAAAACTTA+AGG | 0.330616 | tig0022477:-62210 | None:intergenic |
| CTCCTGGCTAGCCTGTTTAT+AGG | 0.335387 | tig0022477:-60911 | None:intergenic |
| CAGCCTCCCAGCATGTATTT+GGG | 0.344775 | tig0022477:-55919 | None:intergenic |
| TTTCTAATGGTGATCATTGC+TGG | 0.357080 | tig0022477:+61141 | Msa1400850:CDS |
| TCTGAAACTGATTTGACAAC+TGG | 0.358865 | tig0022477:+57750 | Msa1400850:CDS |
| CTCTAGTATACAAAACTTAA+GGG | 0.365596 | tig0022477:-62209 | None:intergenic |
| TCCTTATGTCTCATCTGGTT+TGG | 0.367667 | tig0022477:+62306 | Msa1400850:three_prime_UTR |
| GGGAGTCCTTATGTCTCATC+TGG | 0.368488 | tig0022477:+62301 | Msa1400850:three_prime_UTR |
| ATCTGTATGGAATATTATTC+AGG | 0.371491 | tig0022477:+60370 | Msa1400850:CDS |
| AGCTTACCCAAATTTGGTAT+TGG | 0.373421 | tig0022477:+62230 | Msa1400850:three_prime_UTR |
| CCTAGGACTAGGAGCGTGTT+TGG | 0.377315 | tig0022477:+62269 | Msa1400850:three_prime_UTR |
| TTACTCAGTTATTAATTGTA+AGG | 0.379705 | tig0022477:-54238 | None:intergenic |
| TATATCTTCGTCATATTTGC+CGG | 0.384323 | tig0022477:-60133 | None:intergenic |
| AAACTCAAATGAATCTTAAC+TGG | 0.386832 | tig0022477:+62073 | Msa1400850:three_prime_UTR |
| ATTAATAACTGAGTAATATC+AGG | 0.388048 | tig0022477:+54245 | Msa1400850:five_prime_UTR |
| CCCAAATTTGGTATTGGTTG+GGG | 0.391746 | tig0022477:+62236 | Msa1400850:three_prime_UTR |
| AGCGTGTTTGGCTTTGGGTT+GGG | 0.393248 | tig0022477:+62281 | Msa1400850:three_prime_UTR |
| ATTCCGAGGAATGGGTCTTT+GGG | 0.400938 | tig0022477:-54576 | None:intergenic |
| TTTCTTCCTGACAAAGGGCT+GGG | 0.402523 | tig0022477:-61898 | None:intergenic |
| CATACCTTCAAACTCCTATC+AGG | 0.404765 | tig0022477:-61170 | None:intergenic |
| CCAAATACATGCTGGGAGGC+TGG | 0.405666 | tig0022477:+55920 | Msa1400850:CDS |
| CTGACTGATTCACGGGTGTC+TGG | 0.405932 | tig0022477:-60406 | None:intergenic |
| CTACGCAGATACCGTATTGA+TGG | 0.406515 | tig0022477:-57796 | None:intergenic |
| AGAGGGCTCTCCGGTTGATC+AGG | 0.406967 | tig0022477:+57034 | Msa1400850:CDS |
| CAAAGTCTGCCCCTATAAAC+AGG | 0.407002 | tig0022477:+60900 | Msa1400850:CDS |
| GAGCGTGTTTGGCTTTGGGT+TGG | 0.414636 | tig0022477:+62280 | Msa1400850:three_prime_UTR |
| CAAGCTAGACCTACTGAATT+CGG | 0.417093 | tig0022477:+62021 | Msa1400850:CDS |
| TTCATTGTCTAATGCAGTGT+TGG | 0.417389 | tig0022477:-60037 | None:intergenic |
| TGGTGGAATGGCCCTCCTCC+TGG | 0.417770 | tig0022477:-60927 | None:intergenic |
| AGCAATTGAACACGCACATT+TGG | 0.418179 | tig0022477:+56012 | Msa1400850:CDS |
| CCAGGTTCATCGGTGCCATC+GGG | 0.421592 | tig0022477:-54793 | None:intergenic |
| TACAATCGAACCTGATCAAC+CGG | 0.423911 | tig0022477:-57044 | None:intergenic |
| TACCAAAACCTTACCCCAAA+CGG | 0.426842 | tig0022477:-60951 | None:intergenic |
| CCCCAACCAATACCAAATTT+GGG | 0.434768 | tig0022477:-62236 | None:intergenic |
| CCCCTATAAACAGGCTAGCC+AGG | 0.438029 | tig0022477:+60909 | Msa1400850:CDS |
| CTGATCTTTGTTGAAATTAG+CGG | 0.439746 | tig0022477:-54746 | None:intergenic |
| GGCCACCCCAGCCCTTTGTC+AGG | 0.441632 | tig0022477:+61892 | Msa1400850:CDS |
| CTTGTTGCTTCACGTTGGAC+AGG | 0.441661 | tig0022477:+59985 | Msa1400850:CDS |
| AGGATCCTTGTTTGATAAAG+TGG | 0.441971 | tig0022477:+57554 | Msa1400850:CDS |
| TACCCAAATTTGGTATTGGT+TGG | 0.448904 | tig0022477:+62234 | Msa1400850:three_prime_UTR |
| GGGGTTGTGAAACAGTTAAA+AGG | 0.449128 | tig0022477:+56094 | Msa1400850:CDS |
| CAGGCGCTGGGACAAATTTG+AGG | 0.449184 | tig0022477:+61097 | Msa1400850:intron |
| ACCAGGTTCATCGGTGCCAT+CGG | 0.449789 | tig0022477:-54794 | None:intergenic |
| AATAGACAAGGCTGAGGAAA+AGG | 0.453522 | tig0022477:+56839 | Msa1400850:CDS |
| TTAAAATCACAATGACTACT+TGG | 0.454936 | tig0022477:+62372 | Msa1400850:three_prime_UTR |
| ATCTCCTTTGAAAATGGAAC+GGG | 0.456810 | tig0022477:-62417 | None:intergenic |
| GAGAGTGAACCAGACTTGTC+AGG | 0.460654 | tig0022477:+60219 | Msa1400850:CDS |
| ATTGCTGGAACGGTCCTGAT+AGG | 0.460707 | tig0022477:+61156 | Msa1400850:CDS |
| AAAAGAAGAGAAACAGAAGA+AGG | 0.462480 | tig0022477:+56878 | Msa1400850:CDS |
| TTTAGAAATTGAACAAAAGA+GGG | 0.463031 | tig0022477:-54456 | None:intergenic |
| GAAGAAGGAGGCTGAGGAAA+AGG | 0.463951 | tig0022477:+56893 | Msa1400850:CDS |
| CCCGATGGCACCGATGAACC+TGG | 0.467529 | tig0022477:+54793 | Msa1400850:CDS |
| TTCCTGACAAAGGGCTGGGG+TGG | 0.468881 | tig0022477:-61894 | None:intergenic |
| ACTTTCTTATAGGATGAAGC+TGG | 0.469184 | tig0022477:+57474 | Msa1400850:intron |
| ACCAAAACCTTACCCCAAAC+GGG | 0.470971 | tig0022477:-60950 | None:intergenic |
| GCGACAGAAAAGTCCCGTTA+TGG | 0.471357 | tig0022477:-54422 | None:intergenic |
| AGAAAATACAGAAATCTGTA+TGG | 0.474370 | tig0022477:+60357 | Msa1400850:CDS |
| GGGGAGCGATTCCGAGGAAT+GGG | 0.478435 | tig0022477:-54584 | None:intergenic |
| CCAAACACGCTCCTAGTCCT+AGG | 0.479154 | tig0022477:-62269 | None:intergenic |
| ACCTTACCCCAAACGGGTGG+TGG | 0.480378 | tig0022477:-60944 | None:intergenic |
| TGCATTAGACAATGAAGATC+AGG | 0.480617 | tig0022477:+60044 | Msa1400850:CDS |
| TGGGGAGCGATTCCGAGGAA+TGG | 0.481598 | tig0022477:-54585 | None:intergenic |
| ACCCCAAACGGGTGGTGGAA+TGG | 0.481723 | tig0022477:-60939 | None:intergenic |
| TGAGAAAATTGAAGTTAAAG+AGG | 0.483030 | tig0022477:+57016 | Msa1400850:CDS |
| TATAACAAACCTGACAAGTC+TGG | 0.483214 | tig0022477:-60228 | None:intergenic |
| AAAACCAATGAAGAAGATAC+AGG | 0.483963 | tig0022477:+56933 | Msa1400850:CDS |
| GTTAGGGAGCTCCTAGGACT+AGG | 0.486760 | tig0022477:+62258 | Msa1400850:three_prime_UTR |
| GTTTAGAAATTGAACAAAAG+AGG | 0.488040 | tig0022477:-54457 | None:intergenic |
| TTCTTCCTGACAAAGGGCTG+GGG | 0.488589 | tig0022477:-61897 | None:intergenic |
| CTCTTCCACTTTATCAAACA+AGG | 0.488744 | tig0022477:-57559 | None:intergenic |
| CTTTCTTATAGGATGAAGCT+GGG | 0.488948 | tig0022477:+57475 | Msa1400850:intron |
| CTTGTTTGATAAAGTGGAAG+AGG | 0.495036 | tig0022477:+57560 | Msa1400850:CDS |
| CAAATACATGCTGGGAGGCT+GGG | 0.498891 | tig0022477:+55921 | Msa1400850:CDS |
| CTGGTTGTTCCGAATTCAGT+AGG | 0.499226 | tig0022477:-62030 | None:intergenic |
| CAAAGTGCCCAAATACATGC+TGG | 0.502257 | tig0022477:+55912 | Msa1400850:CDS |
| CAGATTTGTATGAGGAACTA+AGG | 0.503712 | tig0022477:-60191 | None:intergenic |
| TGAACACGCACATTTGGCTC+TGG | 0.506028 | tig0022477:+56018 | Msa1400850:CDS |
| CAGACACCCGTGAATCAGTC+AGG | 0.506973 | tig0022477:+60407 | Msa1400850:CDS |
| GATACGCTAGTGTCCATAAC+GGG | 0.512335 | tig0022477:+54409 | Msa1400850:five_prime_UTR |
| TGAAGTTAAAGAGGGCTCTC+CGG | 0.513998 | tig0022477:+57025 | Msa1400850:CDS |
| TGAGGATTCATACAAAGTAA+TGG | 0.517215 | tig0022477:+61115 | Msa1400850:CDS |
| GGTTTGGATGAAGAAGAGAA+TGG | 0.518565 | tig0022477:-54555 | None:intergenic |
| GGATTGTCAAAGGAAGAATT+AGG | 0.518607 | tig0022477:+59958 | Msa1400850:CDS |
| CGCACATTTGGCTCTGGAGA+AGG | 0.520642 | tig0022477:+56024 | Msa1400850:CDS |
| GTTGGGGTTAGGGAGCTCCT+AGG | 0.524754 | tig0022477:+62252 | Msa1400850:three_prime_UTR |
| GAAACAGAAGAAGGAGGCTG+AGG | 0.526794 | tig0022477:+56887 | Msa1400850:CDS |
| TTTGACGCCCTCTTGATATG+TGG | 0.528509 | tig0022477:-55978 | None:intergenic |
| GCACAACAGATGACCCTTCG+TGG | 0.528602 | tig0022477:+60330 | Msa1400850:CDS |
| ATGTCTACCTGACTGATTCA+CGG | 0.529282 | tig0022477:-60414 | None:intergenic |
| AACAGCTAGTATGAAGATCA+TGG | 0.529848 | tig0022477:+62167 | Msa1400850:intron |
| GTTTGGATGAAGAAGAGAAT+GGG | 0.530013 | tig0022477:-54554 | None:intergenic |
| TCCTTCACTTTCAGAATCAG+TGG | 0.530933 | tig0022477:-57535 | None:intergenic |
| GATGTAATAAGATGTAAAGA+TGG | 0.532369 | tig0022477:+54721 | Msa1400850:CDS |
| AATCCCTACTCGCAACGGCT+TGG | 0.532996 | tig0022477:-61747 | None:intergenic |
| CGGTCCTGATAGGAGTTTGA+AGG | 0.533208 | tig0022477:+61166 | Msa1400850:CDS |
| GAAGCATCTGAGAATACTGA+TGG | 0.537435 | tig0022477:+59937 | Msa1400850:CDS |
| TGTCTACCTGACTGATTCAC+GGG | 0.537621 | tig0022477:-60413 | None:intergenic |
| GATTTCTGCGATTGCCCCGA+TGG | 0.539680 | tig0022477:+54778 | Msa1400850:CDS |
| ACAAATAATGAAGAGAATGA+AGG | 0.542197 | tig0022477:+60084 | Msa1400850:CDS |
| CTCTACGTCAGATTTGTATG+AGG | 0.542667 | tig0022477:-60199 | None:intergenic |
| TTCTGATGAAGCCATCAATA+CGG | 0.542935 | tig0022477:+57785 | Msa1400850:CDS |
| AGAAGAAAGTATACTTAAAG+GGG | 0.543603 | tig0022477:+56075 | Msa1400850:CDS |
| GGGTGTCTGGAATATATTGA+CGG | 0.546399 | tig0022477:-60393 | None:intergenic |
| TTTGGTGATGATCTTGAATG+AGG | 0.553083 | tig0022477:+54337 | Msa1400850:five_prime_UTR |
| CGAGTCAATGATGGAATTTG+CGG | 0.553365 | tig0022477:+54979 | Msa1400850:CDS |
| CTTTGGTATTGCAGGTACAT+CGG | 0.554528 | tig0022477:+54891 | Msa1400850:intron |
| CGAGACGAAAACAGAGACAC+AGG | 0.554823 | tig0022477:-54958 | None:intergenic |
| TAAACAGGCTAGCCAGGAGG+AGG | 0.555074 | tig0022477:+60915 | Msa1400850:CDS |
| TTATGTTTAGATTGCTGTGA+TGG | 0.562355 | tig0022477:+55866 | Msa1400850:intron |
| GCCAAACCAGATGAGACATA+AGG | 0.563949 | tig0022477:-62307 | None:intergenic |
| TGTCAAAGGAAGAATTAGGC+AGG | 0.563992 | tig0022477:+59962 | Msa1400850:CDS |
| AACAGGTCAAGCTAAAATGC+GGG | 0.566211 | tig0022477:+61694 | Msa1400850:intron |
| AAATGGAACGGGCAATCTGA+AGG | 0.566678 | tig0022477:-62406 | None:intergenic |
| GAGAAAATTGAAGTTAAAGA+GGG | 0.567079 | tig0022477:+57017 | Msa1400850:CDS |
| GAATGCAAAAGAAGCTGAGA+GGG | 0.568138 | tig0022477:+57713 | Msa1400850:intron |
| CACACTAGAACGGTATAAGA+TGG | 0.568632 | tig0022477:-62570 | None:intergenic |
| AGAATGGAAACCAGGTTCAT+CGG | 0.576515 | tig0022477:-54803 | None:intergenic |
| AATGGTGATCATTGCTGGAA+CGG | 0.578500 | tig0022477:+61146 | Msa1400850:CDS |
| GGAAAAGGAGCGTTTACAGA+AGG | 0.581537 | tig0022477:+56854 | Msa1400850:CDS |
| CGTTGGACAGGAGAAGATGT+TGG | 0.584656 | tig0022477:+59997 | Msa1400850:CDS |
| AACCTTGGGGAGCGATTCCG+AGG | 0.585592 | tig0022477:-54590 | None:intergenic |
| TTTGGCTCTGGAGAAGGATG+AGG | 0.585737 | tig0022477:+56030 | Msa1400850:CDS |
| GCAGGCTTGTTGCTTCACGT+TGG | 0.589123 | tig0022477:+59980 | Msa1400850:CDS |
| AAACGATGAAGAATTTCAAG+AGG | 0.591771 | tig0022477:+60155 | Msa1400850:CDS |
| GCCATTCCACCACCCGTTTG+GGG | 0.596501 | tig0022477:+60938 | Msa1400850:CDS |
| GAATACTGATGGATTGTCAA+AGG | 0.597321 | tig0022477:+59948 | Msa1400850:CDS |
| AAACCCAAAGACCCATTCCT+CGG | 0.598704 | tig0022477:+54573 | Msa1400850:CDS |
| GATCTCCTTTGAAAATGGAA+CGG | 0.604030 | tig0022477:-62418 | None:intergenic |
| TAGAAATTGAACAAAAGAGG+GGG | 0.604122 | tig0022477:-54454 | None:intergenic |
| CCTGGCTAGCCTGTTTATAG+GGG | 0.604222 | tig0022477:-60909 | None:intergenic |
| CACAATGACTACTTGGTCTG+TGG | 0.605592 | tig0022477:+62379 | Msa1400850:three_prime_UTR |
| TACAGGAATTGAAAATGAAG+CGG | 0.607388 | tig0022477:+56950 | Msa1400850:CDS |
| AAAGTGCCCAAATACATGCT+GGG | 0.607920 | tig0022477:+55913 | Msa1400850:CDS |
| GAACAGGTCAAGCTAAAATG+CGG | 0.608720 | tig0022477:+61693 | Msa1400850:intron |
| AACTGATTTGACAACTGGAA+AGG | 0.613288 | tig0022477:+57755 | Msa1400850:CDS |
| ATAACAATCCCTACTCGCAA+CGG | 0.613583 | tig0022477:-61752 | None:intergenic |
| AAAGATTGCCACATATCAAG+AGG | 0.614060 | tig0022477:+55970 | Msa1400850:CDS |
| TTCCTCGGAATCGCTCCCCA+AGG | 0.616903 | tig0022477:+54588 | Msa1400850:CDS |
| AGAAGAGAAACAGAAGAAGG+AGG | 0.617934 | tig0022477:+56881 | Msa1400850:CDS |
| GCCACTGATTCTGAAAGTGA+AGG | 0.619286 | tig0022477:+57534 | Msa1400850:CDS |
| ACGCGAGGAGAAGAGAAATG+AGG | 0.624983 | tig0022477:-54524 | None:intergenic |
| AGAACAAATAGACAAGGCTG+AGG | 0.625081 | tig0022477:+56833 | Msa1400850:CDS |
| AGATGCTGCTCGTATACGCA+AGG | 0.627154 | tig0022477:+60505 | Msa1400850:intron |
| GTCTAGGAATCACACTAGAA+CGG | 0.628998 | tig0022477:-62580 | None:intergenic |
| TCTGAAACTGACGACGACAC+CGG | 0.629370 | tig0022477:+60114 | Msa1400850:CDS |
| CAATGCTACAGGTCCAGCAA+AGG | 0.629416 | tig0022477:+60702 | Msa1400850:intron |
| AGAAATTGAACAAAAGAGGG+GGG | 0.629996 | tig0022477:-54453 | None:intergenic |
| CGATACGCTAGTGTCCATAA+CGG | 0.632084 | tig0022477:+54408 | Msa1400850:five_prime_UTR |
| GAGACGAAAACAGAGACACA+GGG | 0.636956 | tig0022477:-54957 | None:intergenic |
| TTTCTCATGAATACTTGCCG+CGG | 0.637229 | tig0022477:-57000 | None:intergenic |
| TTAGAAATTGAACAAAAGAG+GGG | 0.637796 | tig0022477:-54455 | None:intergenic |
| GATGGAAGTGATGAATATGA+TGG | 0.639953 | tig0022477:+55884 | Msa1400850:CDS |
| ATCAGTTTCAGATTCAACAG+TGG | 0.643721 | tig0022477:-57739 | None:intergenic |
| TTTCTTATAGGATGAAGCTG+GGG | 0.646594 | tig0022477:+57476 | Msa1400850:intron |
| TTGTCAGGAAGAAAAGCTGA+AGG | 0.652990 | tig0022477:+61907 | Msa1400850:CDS |
| GGTACATCGGCGTGTCCGCG+TGG | 0.653397 | tig0022477:+54904 | Msa1400850:intron |
| ACACGATGCAAAATACTAGA+CGG | 0.663631 | tig0022477:+62463 | Msa1400850:three_prime_UTR |
| AAGATTGCCACATATCAAGA+GGG | 0.666614 | tig0022477:+55971 | Msa1400850:CDS |
| AAACAGGCTAGCCAGGAGGA+GGG | 0.674511 | tig0022477:+60916 | Msa1400850:CDS |
| ATCAGGAAGATATTCTACAC+GGG | 0.675112 | tig0022477:+60061 | Msa1400850:CDS |
| GATCAGGAAGATATTCTACA+CGG | 0.678925 | tig0022477:+60060 | Msa1400850:CDS |
| AGAATGCAAAAGAAGCTGAG+AGG | 0.679629 | tig0022477:+57712 | Msa1400850:intron |
| AAAACCTTACCCCAAACGGG+TGG | 0.683329 | tig0022477:-60947 | None:intergenic |
| TCATAAAGAACAAATAGACA+AGG | 0.689258 | tig0022477:+56827 | Msa1400850:CDS |
| CTATAAACAGGCTAGCCAGG+AGG | 0.720671 | tig0022477:+60912 | Msa1400850:CDS |
| AGACATCAAAGACAATTCCG+CGG | 0.722504 | tig0022477:+56983 | Msa1400850:CDS |
| CAGGTTCATCGGTGCCATCG+GGG | 0.723293 | tig0022477:-54792 | None:intergenic |
| GTGCCCAAATACATGCTGGG+AGG | 0.724802 | tig0022477:+55916 | Msa1400850:CDS |
| AGAATGGGACGAGAAACGCG+AGG | 0.754935 | tig0022477:-54539 | None:intergenic |
| AGACGAAAACAGAGACACAG+GGG | 0.769467 | tig0022477:-54956 | None:intergenic |
| CGACAGTAAAATGTTCCACG+CGG | 0.787877 | tig0022477:-54919 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATTTTGTACTTTTTA+AGG | + | tig0022477:58520-58539 | Msa1400850:intron | 10.0% |
| !!! | ATAAATTTTAAAACATTGTT+AGG | + | tig0022477:59022-59041 | Msa1400850:intron | 10.0% |
| !! | AGATAAAAATGTGTAAAAAA+TGG | - | tig0022477:54629-54648 | None:intergenic | 15.0% |
| !! | AAATAAAATAAAAGAGAGAA+TGG | - | tig0022477:54822-54841 | None:intergenic | 15.0% |
| !!! | ACTTCTAAATTTTTAAGTAT+AGG | - | tig0022477:55298-55317 | None:intergenic | 15.0% |
| !!! | TTACTTTTTGACATTAATTT+TGG | + | tig0022477:55350-55369 | Msa1400850:intron | 15.0% |
| !!! | ATAATAGATTTATTTTGCAT+TGG | + | tig0022477:56300-56319 | Msa1400850:intron | 15.0% |
| !! | TAGAATAAAACACTTTAATA+AGG | - | tig0022477:57114-57133 | None:intergenic | 15.0% |
| !!! | TAATAAGTTTTTCAATTTTG+AGG | - | tig0022477:58637-58656 | None:intergenic | 15.0% |
| !! | AAAAAGTTTCATGTATAAAT+AGG | - | tig0022477:58885-58904 | None:intergenic | 15.0% |
| !! | GAGTCTAATAAAAAAAATTA+AGG | - | tig0022477:59056-59075 | None:intergenic | 15.0% |
| !!! | GGTGTTTATTTATTTTAAAT+TGG | - | tig0022477:59078-59097 | None:intergenic | 15.0% |
| !!! | AGTATAAAGATATCAAATTT+TGG | + | tig0022477:59698-59717 | Msa1400850:intron | 15.0% |
| !! | TTAATTCAAATGTTTATCAA+AGG | + | tig0022477:60254-60273 | Msa1400850:intron | 15.0% |
| !! | TAATTCAAATGTTTATCAAA+GGG | + | tig0022477:60255-60274 | Msa1400850:intron | 15.0% |
| !! | ATTGTATCTATTCATTAAAA+CGG | + | tig0022477:61248-61267 | Msa1400850:intron | 15.0% |
| !! | CTAAAGTAATTATATTCATT+TGG | + | tig0022477:61352-61371 | Msa1400850:intron | 15.0% |
| !!! | TATTTTTTAAGAGAAATGTA+AGG | - | tig0022477:61537-61556 | None:intergenic | 15.0% |
| !!! | TGTAATTTTTTTTTATGAAG+TGG | + | tig0022477:61643-61662 | Msa1400850:intron | 15.0% |
| !!! | ATTATTAATTTTAGATGAAG+TGG | + | tig0022477:62531-62550 | Msa1400850:three_prime_UTR | 15.0% |
| !! | AACAAAATATAAAAAAGTCT+AGG | - | tig0022477:62599-62618 | None:intergenic | 15.0% |
| !!! | TTTTTTATATTTTGTTTGCA+TGG | + | tig0022477:62603-62622 | Msa1400850:three_prime_UTR | 15.0% |
| !! | ATTAATAACTGAGTAATATC+AGG | + | tig0022477:54245-54264 | Msa1400850:five_prime_UTR | 20.0% |
| !! | TTTAGAAATTGAACAAAAGA+GGG | - | tig0022477:54459-54478 | None:intergenic | 20.0% |
| !!! | AACACTCAATATGTTTTTAT+TGG | + | tig0022477:55327-55346 | Msa1400850:intron | 20.0% |
| !!! | TTTTTTGCAAACACAAATTA+AGG | + | tig0022477:55410-55429 | Msa1400850:intron | 20.0% |
| !!! | TTTTACTTTGTTATTTTCTC+TGG | + | tig0022477:55462-55481 | Msa1400850:intron | 20.0% |
| !!! | AAAGAAGAAAGTATACTTAA+AGG | + | tig0022477:56073-56092 | Msa1400850:CDS | 20.0% |
| !!! | AAGAAGAAAGTATACTTAAA+GGG | + | tig0022477:56074-56093 | Msa1400850:CDS | 20.0% |
| !!! | TATCCTTTAAGACAAAATTA+AGG | - | tig0022477:56178-56197 | None:intergenic | 20.0% |
| !!! | CTGTCAATTTTTTTTTTCTA+TGG | - | tig0022477:56235-56254 | None:intergenic | 20.0% |
| !! | TTCATCAATTGAAAATAGAT+GGG | - | tig0022477:56517-56536 | None:intergenic | 20.0% |
| !! | ACATACTTGCTTATTTAAAT+AGG | - | tig0022477:57265-57284 | None:intergenic | 20.0% |
| !! | AACATTGAAAACTTTCTTAT+AGG | + | tig0022477:57464-57483 | Msa1400850:intron | 20.0% |
| !! | AAAATCAAGTAAAAATGTTG+AGG | - | tig0022477:57682-57701 | None:intergenic | 20.0% |
| !!! | TATTTATCGAGTATTTTTCT+TGG | + | tig0022477:58103-58122 | Msa1400850:intron | 20.0% |
| !! | CAGATTTAAACAAAATGAAA+AGG | + | tig0022477:58246-58265 | Msa1400850:intron | 20.0% |
| !! | TTAAACAAAATGAAAAGGAA+TGG | + | tig0022477:58251-58270 | Msa1400850:intron | 20.0% |
| !!! | ACAAATATTTAAAACAGTCA+GGG | - | tig0022477:58451-58470 | None:intergenic | 20.0% |
| !!! | TTATTTTGAGTTCAATTTCT+TGG | - | tig0022477:58730-58749 | None:intergenic | 20.0% |
| !! | ATTTATACACAAACATTGAT+AGG | - | tig0022477:59008-59027 | None:intergenic | 20.0% |
| !!! | ATAAAGATATCAAATTTTGG+CGG | + | tig0022477:59701-59720 | Msa1400850:intron | 20.0% |
| !! | AAAAAACATCAATGAAAAGT+GGG | - | tig0022477:59878-59897 | None:intergenic | 20.0% |
| !! | AATTCAAATGTTTATCAAAG+GGG | + | tig0022477:60256-60275 | Msa1400850:intron | 20.0% |
| !!! | TTTTATATTCTCTGTAAAAG+AGG | + | tig0022477:61050-61069 | Msa1400850:intron | 20.0% |
| !! | TTAACTCTTAAGAAAAAACA+TGG | - | tig0022477:61411-61430 | None:intergenic | 20.0% |
| ! | ACATAAAAATCTGACAAAAC+TGG | + | tig0022477:54308-54327 | Msa1400850:five_prime_UTR | 25.0% |
| ! | TTAGAAATTGAACAAAAGAG+GGG | - | tig0022477:54458-54477 | None:intergenic | 25.0% |
| ! | GTTTAGAAATTGAACAAAAG+AGG | - | tig0022477:54460-54479 | None:intergenic | 25.0% |
| ! | GATGTAATAAGATGTAAAGA+TGG | + | tig0022477:54721-54740 | Msa1400850:CDS | 25.0% |
| ! | TTTGTTTCGTGTTGAATTAT+TGG | + | tig0022477:54849-54868 | Msa1400850:intron | 25.0% |
| !! | AAAGTCGGGTTTTTAAATAA+AGG | - | tig0022477:55182-55201 | None:intergenic | 25.0% |
| !!! | ATTAATTTTGGTGTAGAAAG+TGG | + | tig0022477:55362-55381 | Msa1400850:intron | 25.0% |
| ! | TTGCAAAAAATAAAGTACAC+CGG | - | tig0022477:55400-55419 | None:intergenic | 25.0% |
| ! | GCAACATGACTAAAAATATA+TGG | - | tig0022477:55616-55635 | None:intergenic | 25.0% |
| !! | AACACAATACTTTTAGATCA+TGG | - | tig0022477:55732-55751 | None:intergenic | 25.0% |
| !! | AGAAGAAAGTATACTTAAAG+GGG | + | tig0022477:56075-56094 | Msa1400850:CDS | 25.0% |
| !! | CTACCTTAATTTTGTCTTAA+AGG | + | tig0022477:56172-56191 | Msa1400850:intron | 25.0% |
| !!! | TAGATTTATTTTGCATTGGT+AGG | + | tig0022477:56304-56323 | Msa1400850:intron | 25.0% |
| ! | TAGGATCAAGTTAATGTATA+AGG | + | tig0022477:56323-56342 | Msa1400850:intron | 25.0% |
| ! | ATGTATAAGGAAATCTGATT+AGG | + | tig0022477:56336-56355 | Msa1400850:intron | 25.0% |
| ! | CATATGTGTAATTAAACAGT+TGG | - | tig0022477:56481-56500 | None:intergenic | 25.0% |
| ! | GTTCATCAATTGAAAATAGA+TGG | - | tig0022477:56518-56537 | None:intergenic | 25.0% |
| !!! | AACACTTTCCTTGTTTTAAA+AGG | + | tig0022477:56623-56642 | Msa1400850:intron | 25.0% |
| ! | GTTAAAGAAAGAATTCCATT+TGG | - | tig0022477:56782-56801 | None:intergenic | 25.0% |
| ! | TCATAAAGAACAAATAGACA+AGG | + | tig0022477:56827-56846 | Msa1400850:CDS | 25.0% |
| ! | TGAGAAAATTGAAGTTAAAG+AGG | + | tig0022477:57016-57035 | Msa1400850:CDS | 25.0% |
| ! | GAGAAAATTGAAGTTAAAGA+GGG | + | tig0022477:57017-57036 | Msa1400850:CDS | 25.0% |
| ! | CTTGCTTATTTAAATAGGTA+CGG | - | tig0022477:57260-57279 | None:intergenic | 25.0% |
| !! | GAAGAGGTGAATAAAATTTT+TGG | + | tig0022477:57576-57595 | Msa1400850:intron | 25.0% |
| !! | CTTCAAAATTATTGTTGTTG+AGG | + | tig0022477:57616-57635 | Msa1400850:intron | 25.0% |
| ! | TTATATCTAATGAACACACA+TGG | - | tig0022477:57654-57673 | None:intergenic | 25.0% |
| ! | TCACTTAATCGACAATTATT+AGG | + | tig0022477:57900-57919 | Msa1400850:intron | 25.0% |
| ! | ACAATTATTAGGTCATAATG+AGG | + | tig0022477:57911-57930 | Msa1400850:intron | 25.0% |
| !!! | TCATAAAACTGACTTTTCTT+GGG | - | tig0022477:57980-57999 | None:intergenic | 25.0% |
| !!! | TCTAGTTTTTATGATATGAC+TGG | - | tig0022477:58016-58035 | None:intergenic | 25.0% |
| !! | ATAATCAAGTGCAATTGTTT+TGG | - | tig0022477:58086-58105 | None:intergenic | 25.0% |
| ! | AGACTAGATAACGTAATTAT+TGG | - | tig0022477:58129-58148 | None:intergenic | 25.0% |
| ! | AAATATTCTGCAATCACTTA+TGG | - | tig0022477:58155-58174 | None:intergenic | 25.0% |
| ! | GTTATGTAAATTGCAATCAA+TGG | + | tig0022477:58397-58416 | Msa1400850:intron | 25.0% |
| !!! | GCTTTAAACTCTTTTTTACT+GGG | + | tig0022477:58419-58438 | Msa1400850:intron | 25.0% |
| !! | CACAAATATTTAAAACAGTC+AGG | - | tig0022477:58452-58471 | None:intergenic | 25.0% |
| ! | GTAATGTATATAACAGGATA+AGG | - | tig0022477:58597-58616 | None:intergenic | 25.0% |
| ! | TTAGCAGAAAAAACATATCA+TGG | + | tig0022477:58654-58673 | Msa1400850:intron | 25.0% |
| ! | TTTCATGTATAAATAGGACT+AGG | - | tig0022477:58879-58898 | None:intergenic | 25.0% |
| ! | TAAACACCAATCACAAATAA+AGG | + | tig0022477:59090-59109 | Msa1400850:intron | 25.0% |
| !!! | ATTTTGATTGATAATGTGCT+AGG | + | tig0022477:59448-59467 | Msa1400850:intron | 25.0% |
| !!! | TTTTGATTGATAATGTGCTA+GGG | + | tig0022477:59449-59468 | Msa1400850:intron | 25.0% |
| ! | GAATTCAATTTGATAGGATT+GGG | - | tig0022477:59581-59600 | None:intergenic | 25.0% |
| ! | TGAATTCAATTTGATAGGAT+TGG | - | tig0022477:59582-59601 | None:intergenic | 25.0% |
| ! | AATCCTATCAAATTGAATTC+AGG | + | tig0022477:59581-59600 | Msa1400850:intron | 25.0% |
| ! | ATCCTATCAAATTGAATTCA+GGG | + | tig0022477:59582-59601 | Msa1400850:intron | 25.0% |
| ! | AAAAACATCAATGAAAAGTG+GGG | - | tig0022477:59877-59896 | None:intergenic | 25.0% |
| ! | GAAAAAACATCAATGAAAAG+TGG | - | tig0022477:59879-59898 | None:intergenic | 25.0% |
| !!! | TGTTTTTTCTTTTCTCTTTG+TGG | + | tig0022477:59890-59909 | Msa1400850:intron | 25.0% |
| !!! | GTTTTTTCTTTTCTCTTTGT+GGG | + | tig0022477:59891-59910 | Msa1400850:intron | 25.0% |
| ! | TGGGTATATACATATCTTTA+GGG | + | tig0022477:59910-59929 | Msa1400850:intron | 25.0% |
| ! | ACAAATAATGAAGAGAATGA+AGG | + | tig0022477:60084-60103 | Msa1400850:CDS | 25.0% |
| ! | AGAAAATACAGAAATCTGTA+TGG | + | tig0022477:60357-60376 | Msa1400850:CDS | 25.0% |
| ! | ATCTGTATGGAATATTATTC+AGG | + | tig0022477:60370-60389 | Msa1400850:CDS | 25.0% |
| ! | ACAAATATTATTTGTCCAGA+TGG | + | tig0022477:60450-60469 | Msa1400850:intron | 25.0% |
| !! | CAAAAGCAAAAACTTGATTT+TGG | + | tig0022477:60587-60606 | Msa1400850:CDS | 25.0% |
| !! | AACAGAAAGTAAACTTTTAG+GGG | - | tig0022477:60790-60809 | None:intergenic | 25.0% |
| !! | CAACAGAAAGTAAACTTTTA+GGG | - | tig0022477:60791-60810 | None:intergenic | 25.0% |
| !! | ACAACAGAAAGTAAACTTTT+AGG | - | tig0022477:60792-60811 | None:intergenic | 25.0% |
| !! | TAATTCAGTTTTCTTTTCAC+AGG | + | tig0022477:61078-61097 | Msa1400850:intron | 25.0% |
| !! | AAAGTAATGGTGTTTTCTAA+TGG | + | tig0022477:61128-61147 | Msa1400850:CDS | 25.0% |
| !!! | TAATTAAATTGACTAGTCTG+TGG | + | tig0022477:61568-61587 | Msa1400850:intron | 25.0% |
| !!! | AATTAAATTGACTAGTCTGT+GGG | + | tig0022477:61569-61588 | Msa1400850:intron | 25.0% |
| ! | CATGGAAATAAAAACTTGAA+AGG | + | tig0022477:61598-61617 | Msa1400850:intron | 25.0% |
| ! | ATTAGTTATCGTGTAATGAT+TGG | - | tig0022477:61941-61960 | None:intergenic | 25.0% |
| ! | AAACTCAAATGAATCTTAAC+TGG | + | tig0022477:62073-62092 | Msa1400850:three_prime_UTR | 25.0% |
| ! | CTCTAGTATACAAAACTTAA+GGG | - | tig0022477:62212-62231 | None:intergenic | 25.0% |
| ! | AATAAAAGAAAAATGCGCTA+AGG | - | tig0022477:62354-62373 | None:intergenic | 25.0% |
| ! | TTAAAATCACAATGACTACT+TGG | + | tig0022477:62372-62391 | Msa1400850:three_prime_UTR | 25.0% |
| !! | ATAAAGATCTCCTTTGAAAA+TGG | - | tig0022477:62426-62445 | None:intergenic | 25.0% |
| !!! | AATTTGGTTTTAGAATCTCT+GGG | - | tig0022477:62489-62508 | None:intergenic | 25.0% |
| !!! | AAATTTGGTTTTAGAATCTC+TGG | - | tig0022477:62490-62509 | None:intergenic | 25.0% |
| !!! | GAGATTCTAAAACCAAATTT+TGG | + | tig0022477:62490-62509 | Msa1400850:three_prime_UTR | 25.0% |
| ! | AACTCATTCTAACCAAAATT+TGG | - | tig0022477:62505-62524 | None:intergenic | 25.0% |
| !!! | TATATTTTGTTTGCATGGAT+AGG | + | tig0022477:62608-62627 | Msa1400850:three_prime_UTR | 25.0% |
| !!! | AAAAACTTGTTGAAAAAGGT+TGG | - | tig0022477:62675-62694 | None:intergenic | 25.0% |
| !!! | AACCTTTTTCAACAAGTTTT+TGG | + | tig0022477:62674-62693 | Msa1400850:three_prime_UTR | 25.0% |
| TAGAAATTGAACAAAAGAGG+GGG | - | tig0022477:54457-54476 | None:intergenic | 30.0% | |
| TGTTATAGAAATGACGATGA+CGG | + | tig0022477:54656-54675 | Msa1400850:intron | 30.0% | |
| CTGATCTTTGTTGAAATTAG+CGG | - | tig0022477:54749-54768 | None:intergenic | 30.0% | |
| ! | TTGGTGATTGTTTATTCATG+TGG | + | tig0022477:54868-54887 | Msa1400850:intron | 30.0% |
| ATTGTTTATTCATGTGGCTT+TGG | + | tig0022477:54874-54893 | Msa1400850:intron | 30.0% | |
| TAATGGTTATCGTGGAAAAT+TGG | + | tig0022477:55075-55094 | Msa1400850:intron | 30.0% | |
| AATGGTTATCGTGGAAAATT+GGG | + | tig0022477:55076-55095 | Msa1400850:intron | 30.0% | |
| GAAGAAGAAAAAGACCATAT+TGG | + | tig0022477:55245-55264 | Msa1400850:intron | 30.0% | |
| AGAAAAAGACCATATTGGAT+AGG | + | tig0022477:55250-55269 | Msa1400850:intron | 30.0% | |
| GTATCTATACCTATCCAATA+TGG | - | tig0022477:55262-55281 | None:intergenic | 30.0% | |
| AGTGTAGATACCTAGATATA+TGG | + | tig0022477:55504-55523 | Msa1400850:intron | 30.0% | |
| AATCTCTATGCCATATATCT+AGG | - | tig0022477:55517-55536 | None:intergenic | 30.0% | |
| TCACAGCAATCTAAACATAA+CGG | - | tig0022477:55866-55885 | None:intergenic | 30.0% | |
| TTATGTTTAGATTGCTGTGA+TGG | + | tig0022477:55866-55885 | Msa1400850:intron | 30.0% | |
| AAAAGGGCAGAACAAAAAAA+TGG | - | tig0022477:56122-56141 | None:intergenic | 30.0% | |
| AGTACATCATTACGAGAAAA+GGG | - | tig0022477:56138-56157 | None:intergenic | 30.0% | |
| AAGTACATCATTACGAGAAA+AGG | - | tig0022477:56139-56158 | None:intergenic | 30.0% | |
| TTCTCGTAATGATGTACTTA+AGG | + | tig0022477:56140-56159 | Msa1400850:intron | 30.0% | |
| GCAAGAAACCTTAAAATGTT+CGG | + | tig0022477:56425-56444 | Msa1400850:intron | 30.0% | |
| TGTTTAATTACACATATGCC+CGG | + | tig0022477:56483-56502 | Msa1400850:intron | 30.0% | |
| AATTGAAAATAGATGGGTGT+GGG | - | tig0022477:56511-56530 | None:intergenic | 30.0% | |
| ! | ATTACCTGTCTGTTTTACAA+TGG | + | tig0022477:56562-56581 | Msa1400850:intron | 30.0% |
| ! | TTACCTGTCTGTTTTACAAT+GGG | + | tig0022477:56563-56582 | Msa1400850:intron | 30.0% |
| !!! | TGATCTTGCCTTTTAAAACA+AGG | - | tig0022477:56634-56653 | None:intergenic | 30.0% |
| ! | TCATAAAGGATGTGAACTTT+TGG | + | tig0022477:56695-56714 | Msa1400850:intron | 30.0% |
| ! | CAATTTTCTATGCTACCAAA+TGG | + | tig0022477:56764-56783 | Msa1400850:intron | 30.0% |
| TTGTTCTTTATGATCTGCAA+TGG | - | tig0022477:56820-56839 | None:intergenic | 30.0% | |
| AAAAGAAGAGAAACAGAAGA+AGG | + | tig0022477:56878-56897 | Msa1400850:CDS | 30.0% | |
| AAAACCAATGAAGAAGATAC+AGG | + | tig0022477:56933-56952 | Msa1400850:CDS | 30.0% | |
| AATTCCTGTATCTTCTTCAT+TGG | - | tig0022477:56940-56959 | None:intergenic | 30.0% | |
| TACAGGAATTGAAAATGAAG+CGG | + | tig0022477:56950-56969 | Msa1400850:CDS | 30.0% | |
| ! | TTTTGAACGCATTAACAATC+TGG | + | tig0022477:57136-57155 | Msa1400850:intron | 30.0% |
| ! | CAAAATTATTGTTGTTGAGG+TGG | + | tig0022477:57619-57638 | Msa1400850:intron | 30.0% |
| ! | TTCTTTTGCATTCTACATTC+AGG | - | tig0022477:57706-57725 | None:intergenic | 30.0% |
| !! | CATAAAACTGACTTTTCTTG+GGG | - | tig0022477:57979-57998 | None:intergenic | 30.0% |
| !! | GTCATAAAACTGACTTTTCT+TGG | - | tig0022477:57981-58000 | None:intergenic | 30.0% |
| TGATTGCAGAATATTTCTTG+TGG | + | tig0022477:58159-58178 | Msa1400850:intron | 30.0% | |
| ATCCAAATCTGAGAAATCAA+AGG | - | tig0022477:58200-58219 | None:intergenic | 30.0% | |
| ATTTCTCAGATTTGGATGAA+AGG | + | tig0022477:58203-58222 | Msa1400850:intron | 30.0% | |
| !!! | GGCTTTAAACTCTTTTTTAC+TGG | + | tig0022477:58418-58437 | Msa1400850:intron | 30.0% |
| !!! | AGCTAAACTGCATTTTTTGA+AGG | + | tig0022477:58488-58507 | Msa1400850:intron | 30.0% |
| GTAGGTGTAATGTATATAAC+AGG | - | tig0022477:58603-58622 | None:intergenic | 30.0% | |
| ! | TTTGAGGATATCTTTGTTGT+AGG | - | tig0022477:58621-58640 | None:intergenic | 30.0% |
| ! | ACAATGGTAATTTTCCATGA+AGG | - | tig0022477:58693-58712 | None:intergenic | 30.0% |
| ATTTAGAAATATACCCTCCT+AGG | + | tig0022477:58769-58788 | Msa1400850:intron | 30.0% | |
| TAATGTGTCTATTGTAGAAG+GGG | - | tig0022477:58799-58818 | None:intergenic | 30.0% | |
| GTAATGTGTCTATTGTAGAA+GGG | - | tig0022477:58800-58819 | None:intergenic | 30.0% | |
| AGTAATGTGTCTATTGTAGA+AGG | - | tig0022477:58801-58820 | None:intergenic | 30.0% | |
| TAGTAGTTAGAGAAGTTAGT+TGG | - | tig0022477:58923-58942 | None:intergenic | 30.0% | |
| !! | GTTTGTTATGATATGGGATA+AGG | - | tig0022477:58975-58994 | None:intergenic | 30.0% |
| !! | TGAGGAGTTTGTTATGATAT+GGG | - | tig0022477:58981-59000 | None:intergenic | 30.0% |
| !! | ATGAGGAGTTTGTTATGATA+TGG | - | tig0022477:58982-59001 | None:intergenic | 30.0% |
| CAAACATTGATAGGATAATG+AGG | - | tig0022477:58999-59018 | None:intergenic | 30.0% | |
| ! | GTATGACCTTTATTTGTGAT+TGG | - | tig0022477:59099-59118 | None:intergenic | 30.0% |
| !!! | TGTTTTTGTTTTAGCTCTGT+TGG | - | tig0022477:59144-59163 | None:intergenic | 30.0% |
| !!! | GAGCACTACAACTTTTTTAA+TGG | - | tig0022477:59280-59299 | None:intergenic | 30.0% |
| ! | AGACTATTTCCCTATTTTGT+TGG | - | tig0022477:59402-59421 | None:intergenic | 30.0% |
| ATCCCTGAATTCAATTTGAT+AGG | - | tig0022477:59587-59606 | None:intergenic | 30.0% | |
| ATCAAATTGAATTCAGGGAT+AGG | + | tig0022477:59587-59606 | Msa1400850:intron | 30.0% | |
| ATAAGGTTTATGTACAGAAG+AGG | - | tig0022477:59656-59675 | None:intergenic | 30.0% | |
| !! | GAAATATTTAACTTGTGAGC+AGG | - | tig0022477:59781-59800 | None:intergenic | 30.0% |
| AGCAATCTATCAGTTCATAT+AGG | - | tig0022477:59807-59826 | None:intergenic | 30.0% | |
| AAAACATCAATGAAAAGTGG+GGG | - | tig0022477:59876-59895 | None:intergenic | 30.0% | |
| GTGGGTATATACATATCTTT+AGG | + | tig0022477:59909-59928 | Msa1400850:intron | 30.0% | |
| GGGTATATACATATCTTTAG+GGG | + | tig0022477:59911-59930 | Msa1400850:intron | 30.0% | |
| TATATCTTCGTCATATTTGC+CGG | - | tig0022477:60136-60155 | None:intergenic | 30.0% | |
| AAACGATGAAGAATTTCAAG+AGG | + | tig0022477:60155-60174 | Msa1400850:CDS | 30.0% | |
| ATAACTTACACCTTTCTCTT+TGG | + | tig0022477:60475-60494 | Msa1400850:intron | 30.0% | |
| !! | AGACTGTATTTTAGACAACT+TGG | - | tig0022477:60549-60568 | None:intergenic | 30.0% |
| AAGTAAAACTTCAATGCTAC+AGG | + | tig0022477:60691-60710 | Msa1400850:intron | 30.0% | |
| AATGAATAAAACTCCTTTGC+TGG | - | tig0022477:60718-60737 | None:intergenic | 30.0% | |
| !!! | ACTTTCTGGGATGAAAATTT+TGG | + | tig0022477:60863-60882 | Msa1400850:intron | 30.0% |
| TGAGGATTCATACAAAGTAA+TGG | + | tig0022477:61115-61134 | Msa1400850:CDS | 30.0% | |
| CCTCTCAAAACTGAAATAAA+TGG | - | tig0022477:61223-61242 | None:intergenic | 30.0% | |
| !!! | CCATTTATTTCAGTTTTGAG+AGG | + | tig0022477:61220-61239 | Msa1400850:intron | 30.0% |
| ! | TATACTCAACTGTTACTTAC+AGG | + | tig0022477:61308-61327 | Msa1400850:intron | 30.0% |
| ! | AGAGTTAAGAGCGTATTAAT+AGG | + | tig0022477:61423-61442 | Msa1400850:intron | 30.0% |
| ATAGGTATAATAGCTCATCT+TGG | + | tig0022477:61441-61460 | Msa1400850:intron | 30.0% | |
| TAGGTATAATAGCTCATCTT+GGG | + | tig0022477:61442-61461 | Msa1400850:intron | 30.0% | |
| TACTTTCAGTGAGTTATACT+TGG | + | tig0022477:61474-61493 | Msa1400850:intron | 30.0% | |
| !! | ATTAAATTGACTAGTCTGTG+GGG | + | tig0022477:61570-61589 | Msa1400850:intron | 30.0% |
| GGAAATAAAAACTTGAAAGG+TGG | + | tig0022477:61601-61620 | Msa1400850:intron | 30.0% | |
| TAAAAACTTGAAAGGTGGTT+TGG | + | tig0022477:61606-61625 | Msa1400850:intron | 30.0% | |
| !!! | TTAATGGCTTGTTTTTGAAC+AGG | + | tig0022477:61677-61696 | Msa1400850:intron | 30.0% |
| AAATGAAGACAAGTGGTAAA+AGG | - | tig0022477:61794-61813 | None:intergenic | 30.0% | |
| TTTACCACTTGTCTTCATTT+AGG | + | tig0022477:61794-61813 | Msa1400850:intron | 30.0% | |
| ATATTGTCCTTACCTCAATA+TGG | + | tig0022477:61959-61978 | Msa1400850:intron | 30.0% | |
| ATAAATGCCATATTGAGGTA+AGG | - | tig0022477:61969-61988 | None:intergenic | 30.0% | |
| TCACTATAAATGCCATATTG+AGG | - | tig0022477:61974-61993 | None:intergenic | 30.0% | |
| ATCTTAACTGGTAAGTTTAC+TGG | + | tig0022477:62085-62104 | Msa1400850:intron | 30.0% | |
| GCTCTAGTATACAAAACTTA+AGG | - | tig0022477:62213-62232 | None:intergenic | 30.0% | |
| !! | AGCCAAAAACTTGTTGAAAA+AGG | - | tig0022477:62679-62698 | None:intergenic | 30.0% |
| TGACAAAACTGGTACGAATT+TGG | + | tig0022477:54319-54338 | Msa1400850:five_prime_UTR | 35.0% | |
| !! | TTTGGTGATGATCTTGAATG+AGG | + | tig0022477:54337-54356 | Msa1400850:five_prime_UTR | 35.0% |
| AGAAATTGAACAAAAGAGGG+GGG | - | tig0022477:54456-54475 | None:intergenic | 35.0% | |
| GTTTGGATGAAGAAGAGAAT+GGG | - | tig0022477:54557-54576 | None:intergenic | 35.0% | |
| TAAAAGAGAGAATGGAAACC+AGG | - | tig0022477:54814-54833 | None:intergenic | 35.0% | |
| ! | ACATTTTACTGTCGTAATGC+TGG | + | tig0022477:54928-54947 | Msa1400850:CDS | 35.0% |
| ! | CATTTTACTGTCGTAATGCT+GGG | + | tig0022477:54929-54948 | Msa1400850:CDS | 35.0% |
| ! | TAGACTTTACTGCTTTAGAC+AGG | + | tig0022477:55038-55057 | Msa1400850:intron | 35.0% |
| ! | AGACTTTACTGCTTTAGACA+GGG | + | tig0022477:55039-55058 | Msa1400850:intron | 35.0% |
| ! | AGGGTTTTACATAGCGATAA+TGG | + | tig0022477:55058-55077 | Msa1400850:intron | 35.0% |
| ATGGTTATCGTGGAAAATTG+GGG | + | tig0022477:55077-55096 | Msa1400850:intron | 35.0% | |
| ! | GTGTAGAAAGTGGACATTTT+TGG | + | tig0022477:55372-55391 | Msa1400850:intron | 35.0% |
| !! | AAAGTGGACATTTTTGGATC+CGG | + | tig0022477:55378-55397 | Msa1400850:intron | 35.0% |
| ACATGCTGCTAAAACAATCT+CGG | - | tig0022477:55584-55603 | None:intergenic | 35.0% | |
| CAAGCACCTTATGTTGTTAT+CGG | + | tig0022477:55657-55676 | Msa1400850:intron | 35.0% | |
| TAAGCAGATGAACAGTGTAA+GGG | - | tig0022477:55684-55703 | None:intergenic | 35.0% | |
| TTAAGCAGATGAACAGTGTA+AGG | - | tig0022477:55685-55704 | None:intergenic | 35.0% | |
| AGCAGTTAATTGGGTATCAA+TGG | - | tig0022477:55772-55791 | None:intergenic | 35.0% | |
| GATGGAAGTGATGAATATGA+TGG | + | tig0022477:55884-55903 | Msa1400850:CDS | 35.0% | |
| AAAGATTGCCACATATCAAG+AGG | + | tig0022477:55970-55989 | Msa1400850:CDS | 35.0% | |
| AAGATTGCCACATATCAAGA+GGG | + | tig0022477:55971-55990 | Msa1400850:CDS | 35.0% | |
| GAAATCTGATTAGGAAAGCA+GGG | + | tig0022477:56345-56364 | Msa1400850:intron | 35.0% | |
| GATACAGCAATTGTTGTGTT+TGG | + | tig0022477:56367-56386 | Msa1400850:intron | 35.0% | |
| ! | TTGGTTTGAAGTGCTAGATT+AGG | + | tig0022477:56386-56405 | Msa1400850:intron | 35.0% |
| ! | ATGCTCTTCCGAACATTTTA+AGG | - | tig0022477:56436-56455 | None:intergenic | 35.0% |
| CAATTGAAAATAGATGGGTG+TGG | - | tig0022477:56512-56531 | None:intergenic | 35.0% | |
| GTAAAACAGACAGGTAATAG+TGG | - | tig0022477:56560-56579 | None:intergenic | 35.0% | |
| GCGTGAAATCTGTAATTTCA+CGG | - | tig0022477:56671-56690 | None:intergenic | 35.0% | |
| GATTTCACGCTATGTCATAA+AGG | + | tig0022477:56681-56700 | Msa1400850:intron | 35.0% | |
| !! | AAGGATGTGAACTTTTGGTT+TGG | + | tig0022477:56700-56719 | Msa1400850:intron | 35.0% |
| !!! | AGGATGTGAACTTTTGGTTT+GGG | + | tig0022477:56701-56720 | Msa1400850:intron | 35.0% |
| !!! | ACTTTTGGTTTGGGTGATAA+AGG | + | tig0022477:56710-56729 | Msa1400850:intron | 35.0% |
| ! | GTCGAGTTGTGCAATTAAAA+TGG | - | tig0022477:57074-57093 | None:intergenic | 35.0% |
| TAGGAGGATGATAAAAGATC+AGG | - | tig0022477:57210-57229 | None:intergenic | 35.0% | |
| ! | TGATCTTTTATCATCCTCCT+AGG | + | tig0022477:57209-57228 | Msa1400850:intron | 35.0% |
| ACTTTCTTATAGGATGAAGC+TGG | + | tig0022477:57474-57493 | Msa1400850:intron | 35.0% | |
| CTTTCTTATAGGATGAAGCT+GGG | + | tig0022477:57475-57494 | Msa1400850:intron | 35.0% | |
| TTTCTTATAGGATGAAGCTG+GGG | + | tig0022477:57476-57495 | Msa1400850:intron | 35.0% | |
| ! | AGGATCCTTGTTTGATAAAG+TGG | + | tig0022477:57554-57573 | Msa1400850:CDS | 35.0% |
| CTCTTCCACTTTATCAAACA+AGG | - | tig0022477:57562-57581 | None:intergenic | 35.0% | |
| CTTGTTTGATAAAGTGGAAG+AGG | + | tig0022477:57560-57579 | Msa1400850:CDS | 35.0% | |
| ATCAGTTTCAGATTCAACAG+TGG | - | tig0022477:57742-57761 | None:intergenic | 35.0% | |
| !! | TCTGAAACTGATTTGACAAC+TGG | + | tig0022477:57750-57769 | Msa1400850:CDS | 35.0% |
| !! | AACTGATTTGACAACTGGAA+AGG | + | tig0022477:57755-57774 | Msa1400850:CDS | 35.0% |
| TTCTGATGAAGCCATCAATA+CGG | + | tig0022477:57785-57804 | Msa1400850:CDS | 35.0% | |
| ATTAGGTCATAATGAGGTAC+CGG | + | tig0022477:57917-57936 | Msa1400850:intron | 35.0% | |
| ACAAAAATAGAAGAGCCTAC+CGG | - | tig0022477:57939-57958 | None:intergenic | 35.0% | |
| TATTCTGCAATCACTTATGG+AGG | - | tig0022477:58152-58171 | None:intergenic | 35.0% | |
| ! | TGCCTTTGATTTCTCAGATT+TGG | + | tig0022477:58195-58214 | Msa1400850:intron | 35.0% |
| ATTTGGATGAAAGGAAACAC+TGG | + | tig0022477:58212-58231 | Msa1400850:intron | 35.0% | |
| TTTGGATGAAAGGAAACACT+GGG | + | tig0022477:58213-58232 | Msa1400850:intron | 35.0% | |
| ATCTAACTTTGTCATGTCAG+AGG | - | tig0022477:58317-58336 | None:intergenic | 35.0% | |
| GAATTATCTGTCTTCCTTCA+TGG | + | tig0022477:58676-58695 | Msa1400850:intron | 35.0% | |
| ATTACCATTGTGAGTGTGTT+AGG | + | tig0022477:58702-58721 | Msa1400850:intron | 35.0% | |
| GAGAATACATGAATAGAGGA+GGG | - | tig0022477:58857-58876 | None:intergenic | 35.0% | |
| CTAGGAGAATACATGAATAG+AGG | - | tig0022477:58861-58880 | None:intergenic | 35.0% | |
| GGAGCAGTTAGTAACAATAT+AGG | - | tig0022477:58954-58973 | None:intergenic | 35.0% | |
| CAAAATAGGGAAATAGTCTC+AGG | + | tig0022477:59403-59422 | Msa1400850:intron | 35.0% | |
| GTCTATCAGGTTTCAGATTA+GGG | + | tig0022477:59425-59444 | Msa1400850:intron | 35.0% | |
| GAGATACTCCAACATTTGTT+TGG | - | tig0022477:59522-59541 | None:intergenic | 35.0% | |
| ! | AACAAATGTTGGAGTATCTC+TGG | + | tig0022477:59522-59541 | Msa1400850:intron | 35.0% |
| TCAATTTGATAGGATTGGGT+GGG | - | tig0022477:59577-59596 | None:intergenic | 35.0% | |
| TTCAATTTGATAGGATTGGG+TGG | - | tig0022477:59578-59597 | None:intergenic | 35.0% | |
| AAATCAAACTTTGTGCCTTG+TGG | + | tig0022477:59731-59750 | Msa1400850:intron | 35.0% | |
| AAGTGAATATGAGTTCCACA+AGG | - | tig0022477:59749-59768 | None:intergenic | 35.0% | |
| !! | GAATACTGATGGATTGTCAA+AGG | + | tig0022477:59948-59967 | Msa1400850:CDS | 35.0% |
| GGATTGTCAAAGGAAGAATT+AGG | + | tig0022477:59958-59977 | Msa1400850:CDS | 35.0% | |
| TTCATTGTCTAATGCAGTGT+TGG | - | tig0022477:60040-60059 | None:intergenic | 35.0% | |
| TGCATTAGACAATGAAGATC+AGG | + | tig0022477:60044-60063 | Msa1400850:CDS | 35.0% | |
| GATCAGGAAGATATTCTACA+CGG | + | tig0022477:60060-60079 | Msa1400850:CDS | 35.0% | |
| ATCAGGAAGATATTCTACAC+GGG | + | tig0022477:60061-60080 | Msa1400850:CDS | 35.0% | |
| CAGATTTGTATGAGGAACTA+AGG | - | tig0022477:60194-60213 | None:intergenic | 35.0% | |
| TATAACAAACCTGACAAGTC+TGG | - | tig0022477:60231-60250 | None:intergenic | 35.0% | |
| TCAAATGTTTATCAAAGGGG+TGG | + | tig0022477:60259-60278 | Msa1400850:intron | 35.0% | |
| ATCAAAGGGGTGGTATATAA+TGG | + | tig0022477:60269-60288 | Msa1400850:intron | 35.0% | |
| ! | GTATTTTCTCTAACCACGAA+GGG | - | tig0022477:60346-60365 | None:intergenic | 35.0% |
| ! | TGTATTTTCTCTAACCACGA+AGG | - | tig0022477:60347-60366 | None:intergenic | 35.0% |
| AGGTGTAAGTTATATCCATC+TGG | - | tig0022477:60468-60487 | None:intergenic | 35.0% | |
| TCTAAAGAAGCCAAAGAGAA+AGG | - | tig0022477:60488-60507 | None:intergenic | 35.0% | |
| !! | CAAGTTTTTGCTTTTGTGTC+AGG | - | tig0022477:60583-60602 | None:intergenic | 35.0% |
| !!! | GATTTTGGTTAGTATCATGC+TGG | + | tig0022477:60602-60621 | Msa1400850:intron | 35.0% |
| ! | CACAATACAAATGCTTTGAG+TGG | - | tig0022477:60637-60656 | None:intergenic | 35.0% |
| ! | CACTCAAAGCATTTGTATTG+TGG | + | tig0022477:60635-60654 | Msa1400850:intron | 35.0% |
| ! | TCAAAGCATTTGTATTGTGG+AGG | + | tig0022477:60638-60657 | Msa1400850:intron | 35.0% |
| !!! | TGGGATGAAAATTTTGGTTC+AGG | + | tig0022477:60869-60888 | Msa1400850:intron | 35.0% |
| TTAATCAGACTGTGTTTCTC+CGG | + | tig0022477:60988-61007 | Msa1400850:intron | 35.0% | |
| !!! | ATGCTCGAGTTTTTTTGAAC+CGG | - | tig0022477:61010-61029 | None:intergenic | 35.0% |
| AAAAAAACTCGAGCATCAGT+TGG | + | tig0022477:61014-61033 | Msa1400850:intron | 35.0% | |
| TTTCTAATGGTGATCATTGC+TGG | + | tig0022477:61141-61160 | Msa1400850:CDS | 35.0% | |
| TTCATTTGGATCACAAGTGT+TGG | + | tig0022477:61366-61385 | Msa1400850:intron | 35.0% | |
| !! | TTGGTGACTTTTGCAACATT+GGG | + | tig0022477:61493-61512 | Msa1400850:intron | 35.0% |
| !! | AGTGGACTGTCTGTAATTAA+TGG | + | tig0022477:61661-61680 | Msa1400850:intron | 35.0% |
| TTGACCTAAATGAAGACAAG+TGG | - | tig0022477:61801-61820 | None:intergenic | 35.0% | |
| TATGGCATTTATAGTGACTG+TGG | + | tig0022477:61977-61996 | Msa1400850:intron | 35.0% | |
| ! | TGAGTTTTCACAACTCATCA+CGG | - | tig0022477:62060-62079 | None:intergenic | 35.0% |
| ! | GCATTGTGATTCCTTTTCTT+TGG | + | tig0022477:62107-62126 | Msa1400850:intron | 35.0% |
| GACTCAAATCTCCAAAGAAA+AGG | - | tig0022477:62121-62140 | None:intergenic | 35.0% | |
| ! | TTTCTTTGGAGATTTGAGTC+CGG | + | tig0022477:62121-62140 | Msa1400850:intron | 35.0% |
| ! | GCAAAAAAGTTGATCATCTC+CGG | - | tig0022477:62143-62162 | None:intergenic | 35.0% |
| AACAGCTAGTATGAAGATCA+TGG | + | tig0022477:62167-62186 | Msa1400850:intron | 35.0% | |
| TACTAGAGCTTACCCAAATT+TGG | + | tig0022477:62224-62243 | Msa1400850:three_prime_UTR | 35.0% | |
| AGCTTACCCAAATTTGGTAT+TGG | + | tig0022477:62230-62249 | Msa1400850:three_prime_UTR | 35.0% | |
| !! | TACCCAAATTTGGTATTGGT+TGG | + | tig0022477:62234-62253 | Msa1400850:three_prime_UTR | 35.0% |
| !! | ACCCAAATTTGGTATTGGTT+GGG | + | tig0022477:62235-62254 | Msa1400850:three_prime_UTR | 35.0% |
| ! | ATCTCCTTTGAAAATGGAAC+GGG | - | tig0022477:62420-62439 | None:intergenic | 35.0% |
| ! | GATCTCCTTTGAAAATGGAA+CGG | - | tig0022477:62421-62440 | None:intergenic | 35.0% |
| ACACGATGCAAAATACTAGA+CGG | + | tig0022477:62463-62482 | Msa1400850:three_prime_UTR | 35.0% | |
| !! | TTTTGTTTGCATGGATAGGA+AGG | + | tig0022477:62612-62631 | Msa1400850:three_prime_UTR | 35.0% |
| GGTTTGGATGAAGAAGAGAA+TGG | - | tig0022477:54558-54577 | None:intergenic | 40.0% | |
| TAACAGTGAGATGAACCTTG+GGG | - | tig0022477:54606-54625 | None:intergenic | 40.0% | |
| GTAACAGTGAGATGAACCTT+GGG | - | tig0022477:54607-54626 | None:intergenic | 40.0% | |
| AGAATGGAAACCAGGTTCAT+CGG | - | tig0022477:54806-54825 | None:intergenic | 40.0% | |
| CTTTGGTATTGCAGGTACAT+CGG | + | tig0022477:54891-54910 | Msa1400850:intron | 40.0% | |
| ! | TTTTCGTCTCGAGTCAATGA+TGG | + | tig0022477:54970-54989 | Msa1400850:CDS | 40.0% |
| ! | CGAGTCAATGATGGAATTTG+CGG | + | tig0022477:54979-54998 | Msa1400850:CDS | 40.0% |
| ! | CATAGCGATAATGGTTATCG+TGG | + | tig0022477:55067-55086 | Msa1400850:intron | 40.0% |
| AATGTGTGTGACCTCAATTG+CGG | + | tig0022477:55103-55122 | Msa1400850:intron | 40.0% | |
| AGTTGTCAAAACCGCAATTG+AGG | - | tig0022477:55117-55136 | None:intergenic | 40.0% | |
| ATATCACACTGCACAGATTG+TGG | + | tig0022477:55149-55168 | Msa1400850:intron | 40.0% | |
| ! | TTTAGGTTCGTCGCTAAAGT+CGG | - | tig0022477:55197-55216 | None:intergenic | 40.0% |
| TTAGCGACGAACCTAAAACT+AGG | + | tig0022477:55200-55219 | Msa1400850:intron | 40.0% | |
| TAGCGACGAACCTAAAACTA+GGG | + | tig0022477:55201-55220 | Msa1400850:intron | 40.0% | |
| GAACCTAAAACTAGGGACAA+GGG | + | tig0022477:55208-55227 | Msa1400850:intron | 40.0% | |
| !! | TTTCCCTTGTCCCTAGTTTT+AGG | - | tig0022477:55214-55233 | None:intergenic | 40.0% |
| GGATAGGTATAGATACGCAT+AGG | + | tig0022477:55266-55285 | Msa1400850:intron | 40.0% | |
| AAGGGACCGATAACAACATA+AGG | - | tig0022477:55666-55685 | None:intergenic | 40.0% | |
| CTACAGGCTAGCAGTTAATT+GGG | - | tig0022477:55781-55800 | None:intergenic | 40.0% | |
| ACTACAGGCTAGCAGTTAAT+TGG | - | tig0022477:55782-55801 | None:intergenic | 40.0% | |
| CTAGAAACTGCACAAACTAC+AGG | - | tig0022477:55797-55816 | None:intergenic | 40.0% | |
| AGCAATCTAAACATAACGGC+AGG | - | tig0022477:55862-55881 | None:intergenic | 40.0% | |
| ! | AAAGTGCCCAAATACATGCT+GGG | + | tig0022477:55913-55932 | Msa1400850:CDS | 40.0% |
| AGCAATTGAACACGCACATT+TGG | + | tig0022477:56012-56031 | Msa1400850:CDS | 40.0% | |
| GGGGTTGTGAAACAGTTAAA+AGG | + | tig0022477:56094-56113 | Msa1400850:CDS | 40.0% | |
| GGAAATCTGATTAGGAAAGC+AGG | + | tig0022477:56344-56363 | Msa1400850:intron | 40.0% | |
| TCTCCCATTGTAAAACAGAC+AGG | - | tig0022477:56569-56588 | None:intergenic | 40.0% | |
| ! | TGTCTGTTTTACAATGGGAG+AGG | + | tig0022477:56568-56587 | Msa1400850:intron | 40.0% |
| AGAACAAATAGACAAGGCTG+AGG | + | tig0022477:56833-56852 | Msa1400850:CDS | 40.0% | |
| AATAGACAAGGCTGAGGAAA+AGG | + | tig0022477:56839-56858 | Msa1400850:CDS | 40.0% | |
| AGAAGAGAAACAGAAGAAGG+AGG | + | tig0022477:56881-56900 | Msa1400850:CDS | 40.0% | |
| AGACATCAAAGACAATTCCG+CGG | + | tig0022477:56983-57002 | Msa1400850:CDS | 40.0% | |
| TTTCTCATGAATACTTGCCG+CGG | - | tig0022477:57003-57022 | None:intergenic | 40.0% | |
| TACAATCGAACCTGATCAAC+CGG | - | tig0022477:57047-57066 | None:intergenic | 40.0% | |
| ! | CGCATTAACAATCTGGAATC+TGG | + | tig0022477:57143-57162 | Msa1400850:intron | 40.0% |
| GGCATTCAGCTAATATGAAG+TGG | + | tig0022477:57164-57183 | Msa1400850:intron | 40.0% | |
| TTATCATCCTCCTAGGAGTT+AGG | + | tig0022477:57216-57235 | Msa1400850:intron | 40.0% | |
| TAGTAAACCTCCTAACTCCT+AGG | - | tig0022477:57229-57248 | None:intergenic | 40.0% | |
| AGAGAAATAATATGCCCCAG+TGG | - | tig0022477:57359-57378 | None:intergenic | 40.0% | |
| TGTTTCACTACTCCATCATG+TGG | + | tig0022477:57418-57437 | Msa1400850:intron | 40.0% | |
| TTAAACCACTGACCACATGA+TGG | - | tig0022477:57433-57452 | None:intergenic | 40.0% | |
| TCCTTCACTTTCAGAATCAG+TGG | - | tig0022477:57538-57557 | None:intergenic | 40.0% | |
| ATCTAATGAACACACATGGC+AGG | - | tig0022477:57650-57669 | None:intergenic | 40.0% | |
| AGAATGCAAAAGAAGCTGAG+AGG | + | tig0022477:57712-57731 | Msa1400850:intron | 40.0% | |
| GAATGCAAAAGAAGCTGAGA+GGG | + | tig0022477:57713-57732 | Msa1400850:intron | 40.0% | |
| TTCGTTATGAGACCATTCAC+TGG | - | tig0022477:58051-58070 | None:intergenic | 40.0% | |
| TTGGATGAAAGGAAACACTG+GGG | + | tig0022477:58214-58233 | Msa1400850:intron | 40.0% | |
| TTGAAACAATACCTCCCTTG+TGG | + | tig0022477:58281-58300 | Msa1400850:intron | 40.0% | |
| ! | TTTTGTCGTCGTACAAAGTC+AGG | - | tig0022477:58568-58587 | None:intergenic | 40.0% |
| ATTGTAGAAGGGGAAATCCT+AGG | - | tig0022477:58789-58808 | None:intergenic | 40.0% | |
| GGAGAATACATGAATAGAGG+AGG | - | tig0022477:58858-58877 | None:intergenic | 40.0% | |
| TGGCTGGGAGCAAATTAATA+GGG | - | tig0022477:59124-59143 | None:intergenic | 40.0% | |
| TTGGCTGGGAGCAAATTAAT+AGG | - | tig0022477:59125-59144 | None:intergenic | 40.0% | |
| !!! | TTGTTTTAGCTCTGTTGGCT+GGG | - | tig0022477:59139-59158 | None:intergenic | 40.0% |
| !!! | TTTGTTTTAGCTCTGTTGGC+TGG | - | tig0022477:59140-59159 | None:intergenic | 40.0% |
| AACACAACAAGAGAGTCAGT+CGG | + | tig0022477:59181-59200 | Msa1400850:intron | 40.0% | |
| GTGCTGCAAGTAAAAAAGCT+CGG | - | tig0022477:59332-59351 | None:intergenic | 40.0% | |
| AGGTCTCACACCAACAAAAT+AGG | + | tig0022477:59389-59408 | Msa1400850:intron | 40.0% | |
| GGTCTCACACCAACAAAATA+GGG | + | tig0022477:59390-59409 | Msa1400850:intron | 40.0% | |
| GAAATAGTCTCAGGTCTATC+AGG | + | tig0022477:59412-59431 | Msa1400850:intron | 40.0% | |
| GGTCTATCAGGTTTCAGATT+AGG | + | tig0022477:59424-59443 | Msa1400850:intron | 40.0% | |
| !! | ATTGATAATGTGCTAGGGCT+AGG | + | tig0022477:59454-59473 | Msa1400850:intron | 40.0% |
| AATGGGGACCAAACAAATGT+TGG | + | tig0022477:59511-59530 | Msa1400850:intron | 40.0% | |
| TTCAGGGATAGGAACAATCA+TGG | + | tig0022477:59598-59617 | Msa1400850:intron | 40.0% | |
| TACTTGTATTCGAGACTGCA+AGG | - | tig0022477:59682-59701 | None:intergenic | 40.0% | |
| ! | GAAGCATCTGAGAATACTGA+TGG | + | tig0022477:59937-59956 | Msa1400850:CDS | 40.0% |
| TGTCAAAGGAAGAATTAGGC+AGG | + | tig0022477:59962-59981 | Msa1400850:CDS | 40.0% | |
| CTCTACGTCAGATTTGTATG+AGG | - | tig0022477:60202-60221 | None:intergenic | 40.0% | |
| ! | GGGTGTCTGGAATATATTGA+CGG | - | tig0022477:60396-60415 | None:intergenic | 40.0% |
| ! | ATGTCTACCTGACTGATTCA+CGG | - | tig0022477:60417-60436 | None:intergenic | 40.0% |
| GTATTGTGGAGGTTTAGTTG+TGG | + | tig0022477:60649-60668 | Msa1400850:intron | 40.0% | |
| TGGAGGTTTAGTTGTGGAAT+TGG | + | tig0022477:60655-60674 | Msa1400850:intron | 40.0% | |
| AGAAAGTGAGATGACGAGAT+AGG | - | tig0022477:60850-60869 | None:intergenic | 40.0% | |
| TATCTCGTCATCTCACTTTC+TGG | + | tig0022477:60849-60868 | Msa1400850:intron | 40.0% | |
| ATCTCGTCATCTCACTTTCT+GGG | + | tig0022477:60850-60869 | Msa1400850:intron | 40.0% | |
| TACCAAAACCTTACCCCAAA+CGG | - | tig0022477:60954-60973 | None:intergenic | 40.0% | |
| AATGGTGATCATTGCTGGAA+CGG | + | tig0022477:61146-61165 | Msa1400850:CDS | 40.0% | |
| CATACCTTCAAACTCCTATC+AGG | - | tig0022477:61173-61192 | None:intergenic | 40.0% | |
| !! | CTTGGTGACTTTTGCAACAT+TGG | + | tig0022477:61492-61511 | Msa1400850:intron | 40.0% |
| ! | TGAAAGGTGGTTTGGATTTG+TGG | + | tig0022477:61614-61633 | Msa1400850:intron | 40.0% |
| GAACAGGTCAAGCTAAAATG+CGG | + | tig0022477:61693-61712 | Msa1400850:intron | 40.0% | |
| AACAGGTCAAGCTAAAATGC+GGG | + | tig0022477:61694-61713 | Msa1400850:intron | 40.0% | |
| ATAACAATCCCTACTCGCAA+CGG | - | tig0022477:61755-61774 | None:intergenic | 40.0% | |
| ! | TTTTCCTGATTGCTGTCTCA+TGG | + | tig0022477:61842-61861 | Msa1400850:intron | 40.0% |
| TTTCCTGATTGCTGTCTCAT+GGG | + | tig0022477:61843-61862 | Msa1400850:intron | 40.0% | |
| !! | TGGCAGGTATGTAGCTTTAT+TGG | + | tig0022477:61871-61890 | Msa1400850:intron | 40.0% |
| ! | CAGCTTTTCTTCCTGACAAA+GGG | - | tig0022477:61906-61925 | None:intergenic | 40.0% |
| ! | TCAGCTTTTCTTCCTGACAA+AGG | - | tig0022477:61907-61926 | None:intergenic | 40.0% |
| TTGTCAGGAAGAAAAGCTGA+AGG | + | tig0022477:61907-61926 | Msa1400850:CDS | 40.0% | |
| TAGTGACTGTGGAATGTAAC+AGG | + | tig0022477:61988-62007 | Msa1400850:intron | 40.0% | |
| CAAGCTAGACCTACTGAATT+CGG | + | tig0022477:62021-62040 | Msa1400850:CDS | 40.0% | |
| CCCCAACCAATACCAAATTT+GGG | - | tig0022477:62239-62258 | None:intergenic | 40.0% | |
| !! | CCCAAATTTGGTATTGGTTG+GGG | + | tig0022477:62236-62255 | Msa1400850:three_prime_UTR | 40.0% |
| ACCCCAACCAATACCAAATT+TGG | - | tig0022477:62240-62259 | None:intergenic | 40.0% | |
| !! | ATTTGGTATTGGTTGGGGTT+AGG | + | tig0022477:62241-62260 | Msa1400850:three_prime_UTR | 40.0% |
| !! | TTTGGTATTGGTTGGGGTTA+GGG | + | tig0022477:62242-62261 | Msa1400850:three_prime_UTR | 40.0% |
| TCCTTATGTCTCATCTGGTT+TGG | + | tig0022477:62306-62325 | Msa1400850:three_prime_UTR | 40.0% | |
| ! | ATTGCCCGTTCCATTTTCAA+AGG | + | tig0022477:62413-62432 | Msa1400850:three_prime_UTR | 40.0% |
| CACACTAGAACGGTATAAGA+TGG | - | tig0022477:62573-62592 | None:intergenic | 40.0% | |
| GTCTAGGAATCACACTAGAA+CGG | - | tig0022477:62583-62602 | None:intergenic | 40.0% | |
| CGATACGCTAGTGTCCATAA+CGG | + | tig0022477:54408-54427 | Msa1400850:five_prime_UTR | 45.0% | |
| GATACGCTAGTGTCCATAAC+GGG | + | tig0022477:54409-54428 | Msa1400850:five_prime_UTR | 45.0% | |
| AAACCCAAAGACCCATTCCT+CGG | + | tig0022477:54573-54592 | Msa1400850:CDS | 45.0% | |
| ATTCCGAGGAATGGGTCTTT+GGG | - | tig0022477:54579-54598 | None:intergenic | 45.0% | |
| GGTAACAGTGAGATGAACCT+TGG | - | tig0022477:54608-54627 | None:intergenic | 45.0% | |
| ! | GAAATGACGATGACGGTTAC+TGG | + | tig0022477:54663-54682 | Msa1400850:intron | 45.0% |
| !! | TCATGTGGCTTTGGTATTGC+AGG | + | tig0022477:54883-54902 | Msa1400850:intron | 45.0% |
| CGACAGTAAAATGTTCCACG+CGG | - | tig0022477:54922-54941 | None:intergenic | 45.0% | |
| AGACGAAAACAGAGACACAG+GGG | - | tig0022477:54959-54978 | None:intergenic | 45.0% | |
| GAGACGAAAACAGAGACACA+GGG | - | tig0022477:54960-54979 | None:intergenic | 45.0% | |
| CACTGCACAGATTGTGGTTA+TGG | + | tig0022477:55155-55174 | Msa1400850:intron | 45.0% | |
| TTAGGTTCGTCGCTAAAGTC+GGG | - | tig0022477:55196-55215 | None:intergenic | 45.0% | |
| CGAACCTAAAACTAGGGACA+AGG | + | tig0022477:55207-55226 | Msa1400850:intron | 45.0% | |
| ! | CAAAGTGCCCAAATACATGC+TGG | + | tig0022477:55912-55931 | Msa1400850:CDS | 45.0% |
| TTTGACGCCCTCTTGATATG+TGG | - | tig0022477:55981-56000 | None:intergenic | 45.0% | |
| GCTAGATTAGGCGTCTTCTT+TGG | + | tig0022477:56398-56417 | Msa1400850:intron | 45.0% | |
| !! | GGAAAAGGAGCGTTTACAGA+AGG | + | tig0022477:56854-56873 | Msa1400850:CDS | 45.0% |
| TGAAGTTAAAGAGGGCTCTC+CGG | + | tig0022477:57025-57044 | Msa1400850:CDS | 45.0% | |
| TAAACCTCCTAACTCCTAGG+AGG | - | tig0022477:57226-57245 | None:intergenic | 45.0% | |
| !! | GCCACTGATTCTGAAAGTGA+AGG | + | tig0022477:57534-57553 | Msa1400850:CDS | 45.0% |
| CTACGCAGATACCGTATTGA+TGG | - | tig0022477:57799-57818 | None:intergenic | 45.0% | |
| TGAAGTCAGACACCAGTGAA+TGG | + | tig0022477:58036-58055 | Msa1400850:intron | 45.0% | |
| !! | GAGGATTAGAAGCACCACAA+GGG | - | tig0022477:58298-58317 | None:intergenic | 45.0% |
| !! | AGAGGATTAGAAGCACCACA+AGG | - | tig0022477:58299-58318 | None:intergenic | 45.0% |
| GGTTCCTAACACACTCACAA+TGG | - | tig0022477:58709-58728 | None:intergenic | 45.0% | |
| TAGAAGGGGAAATCCTAGGA+GGG | - | tig0022477:58785-58804 | None:intergenic | 45.0% | |
| TGCTCAAAGATGCAGAGTCA+AGG | + | tig0022477:59295-59314 | Msa1400850:intron | 45.0% | |
| TGCTCCACCAACTGGAAAAT+GGG | + | tig0022477:59494-59513 | Msa1400850:intron | 45.0% | |
| ! | TTTGGTCCCCATTTTCCAGT+TGG | - | tig0022477:59504-59523 | None:intergenic | 45.0% |
| ! | TCGAGACTGCAAGGAGTATA+AGG | - | tig0022477:59673-59692 | None:intergenic | 45.0% |
| ! | TGTCTACCTGACTGATTCAC+GGG | - | tig0022477:60416-60435 | None:intergenic | 45.0% |
| CAAAGTCTGCCCCTATAAAC+AGG | + | tig0022477:60900-60919 | Msa1400850:CDS | 45.0% | |
| !! | TCCTGGCTAGCCTGTTTATA+GGG | - | tig0022477:60913-60932 | None:intergenic | 45.0% |
| ACCAAAACCTTACCCCAAAC+GGG | - | tig0022477:60953-60972 | None:intergenic | 45.0% | |
| ! | AGTTTTCTTTTCACAGGCGC+TGG | + | tig0022477:61084-61103 | Msa1400850:intron | 45.0% |
| ! | GTTTTCTTTTCACAGGCGCT+GGG | + | tig0022477:61085-61104 | Msa1400850:intron | 45.0% |
| AAAGCTACATACCTGCCATG+AGG | - | tig0022477:61869-61888 | None:intergenic | 45.0% | |
| TTTCTTCCTGACAAAGGGCT+GGG | - | tig0022477:61901-61920 | None:intergenic | 45.0% | |
| ! | TTTTCTTCCTGACAAAGGGC+TGG | - | tig0022477:61902-61921 | None:intergenic | 45.0% |
| CTGGTTGTTCCGAATTCAGT+AGG | - | tig0022477:62033-62052 | None:intergenic | 45.0% | |
| GCCAAACCAGATGAGACATA+AGG | - | tig0022477:62310-62329 | None:intergenic | 45.0% | |
| CACAATGACTACTTGGTCTG+TGG | + | tig0022477:62379-62398 | Msa1400850:three_prime_UTR | 45.0% | |
| AAATGGAACGGGCAATCTGA+AGG | - | tig0022477:62409-62428 | None:intergenic | 45.0% | |
| GCGACAGAAAAGTCCCGTTA+TGG | - | tig0022477:54425-54444 | None:intergenic | 50.0% | |
| ACGCGAGGAGAAGAGAAATG+AGG | - | tig0022477:54527-54546 | None:intergenic | 50.0% | |
| ! | GAGGAATGGGTCTTTGGGTT+TGG | - | tig0022477:54574-54593 | None:intergenic | 50.0% |
| GATTCCGAGGAATGGGTCTT+TGG | - | tig0022477:54580-54599 | None:intergenic | 50.0% | |
| CGAGACGAAAACAGAGACAC+AGG | - | tig0022477:54961-54980 | None:intergenic | 50.0% | |
| GCAGTGCAACAAGACGAGTA+TGG | + | tig0022477:55634-55653 | Msa1400850:intron | 50.0% | |
| CAGCCTCCCAGCATGTATTT+GGG | - | tig0022477:55922-55941 | None:intergenic | 50.0% | |
| CAAATACATGCTGGGAGGCT+GGG | + | tig0022477:55921-55940 | Msa1400850:CDS | 50.0% | |
| ! | TGAACACGCACATTTGGCTC+TGG | + | tig0022477:56018-56037 | Msa1400850:CDS | 50.0% |
| !! | TTTGGCTCTGGAGAAGGATG+AGG | + | tig0022477:56030-56049 | Msa1400850:CDS | 50.0% |
| AAATAGATGGGTGTGGGCAC+CGG | - | tig0022477:56505-56524 | None:intergenic | 50.0% | |
| TGGCACTACTTTGTCACGTC+TGG | - | tig0022477:56540-56559 | None:intergenic | 50.0% | |
| GAAACAGAAGAAGGAGGCTG+AGG | + | tig0022477:56887-56906 | Msa1400850:CDS | 50.0% | |
| GAAGAAGGAGGCTGAGGAAA+AGG | + | tig0022477:56893-56912 | Msa1400850:CDS | 50.0% | |
| TCATCCTCCTAGGAGTTAGG+AGG | + | tig0022477:57219-57238 | Msa1400850:intron | 50.0% | |
| CTACTCCATCATGTGGTCAG+TGG | + | tig0022477:57425-57444 | Msa1400850:intron | 50.0% | |
| !! | GGTCATAATGAGGTACCGGT+AGG | + | tig0022477:57921-57940 | Msa1400850:intron | 50.0% |
| !! | GATTAGAAGCACCACAAGGG+AGG | - | tig0022477:58295-58314 | None:intergenic | 50.0% |
| GTAGAAGGGGAAATCCTAGG+AGG | - | tig0022477:58786-58805 | None:intergenic | 50.0% | |
| ! | TACCTGAAACCTTGGTGCAG+TGG | - | tig0022477:59362-59381 | None:intergenic | 50.0% |
| TGCGATGCTACCTGAAACCT+TGG | - | tig0022477:59370-59389 | None:intergenic | 50.0% | |
| ! | AAGGTTTCAGGTAGCATCGC+AGG | + | tig0022477:59369-59388 | Msa1400850:intron | 50.0% |
| TGATTACCTGCTCCACCAAC+TGG | + | tig0022477:59486-59505 | Msa1400850:intron | 50.0% | |
| !!! | CATTTTCCAGTTGGTGGAGC+AGG | - | tig0022477:59495-59514 | None:intergenic | 50.0% |
| CTGCTCCACCAACTGGAAAA+TGG | + | tig0022477:59493-59512 | Msa1400850:intron | 50.0% | |
| GCTCCACCAACTGGAAAATG+GGG | + | tig0022477:59495-59514 | Msa1400850:intron | 50.0% | |
| ! | TGGAGTATCTCTGGTTCCCA+CGG | + | tig0022477:59531-59550 | Msa1400850:intron | 50.0% |
| ! | CTTGTTGCTTCACGTTGGAC+AGG | + | tig0022477:59985-60004 | Msa1400850:CDS | 50.0% |
| CGTTGGACAGGAGAAGATGT+TGG | + | tig0022477:59997-60016 | Msa1400850:CDS | 50.0% | |
| ! | TCTGAAACTGACGACGACAC+CGG | + | tig0022477:60114-60133 | Msa1400850:CDS | 50.0% |
| GAGAGTGAACCAGACTTGTC+AGG | + | tig0022477:60219-60238 | Msa1400850:CDS | 50.0% | |
| AGATGCTGCTCGTATACGCA+AGG | + | tig0022477:60505-60524 | Msa1400850:intron | 50.0% | |
| CAATGCTACAGGTCCAGCAA+AGG | + | tig0022477:60702-60721 | Msa1400850:intron | 50.0% | |
| !! | CCTGGCTAGCCTGTTTATAG+GGG | - | tig0022477:60912-60931 | None:intergenic | 50.0% |
| !! | CTCCTGGCTAGCCTGTTTAT+AGG | - | tig0022477:60914-60933 | None:intergenic | 50.0% |
| ! | CTATAAACAGGCTAGCCAGG+AGG | + | tig0022477:60912-60931 | Msa1400850:CDS | 50.0% |
| AAAACCTTACCCCAAACGGG+TGG | - | tig0022477:60950-60969 | None:intergenic | 50.0% | |
| !! | ACCCGTTTGGGGTAAGGTTT+TGG | + | tig0022477:60949-60968 | Msa1400850:intron | 50.0% |
| ATTGCTGGAACGGTCCTGAT+AGG | + | tig0022477:61156-61175 | Msa1400850:CDS | 50.0% | |
| CGGTCCTGATAGGAGTTTGA+AGG | + | tig0022477:61166-61185 | Msa1400850:CDS | 50.0% | |
| CTAGTCTGTGGGGTTTCTCA+TGG | + | tig0022477:61580-61599 | Msa1400850:intron | 50.0% | |
| TTCTTCCTGACAAAGGGCTG+GGG | - | tig0022477:61900-61919 | None:intergenic | 50.0% | |
| CACAACTCATCACGGCTTTC+TGG | - | tig0022477:62052-62071 | None:intergenic | 50.0% | |
| ! | ACTAGGAGCGTGTTTGGCTT+TGG | + | tig0022477:62275-62294 | Msa1400850:three_prime_UTR | 50.0% |
| !! | CTAGGAGCGTGTTTGGCTTT+GGG | + | tig0022477:62276-62295 | Msa1400850:three_prime_UTR | 50.0% |
| !! | AGCGTGTTTGGCTTTGGGTT+GGG | + | tig0022477:62281-62300 | Msa1400850:three_prime_UTR | 50.0% |
| GGGAGTCCTTATGTCTCATC+TGG | + | tig0022477:62301-62320 | Msa1400850:three_prime_UTR | 50.0% | |
| AGAATGGGACGAGAAACGCG+AGG | - | tig0022477:54542-54561 | None:intergenic | 55.0% | |
| GATTTCTGCGATTGCCCCGA+TGG | + | tig0022477:54778-54797 | Msa1400850:CDS | 55.0% | |
| !! | ACCAGGTTCATCGGTGCCAT+CGG | - | tig0022477:54797-54816 | None:intergenic | 55.0% |
| GTGCCCAAATACATGCTGGG+AGG | + | tig0022477:55916-55935 | Msa1400850:CDS | 55.0% | |
| CCAGCCTCCCAGCATGTATT+TGG | - | tig0022477:55923-55942 | None:intergenic | 55.0% | |
| CCAAATACATGCTGGGAGGC+TGG | + | tig0022477:55920-55939 | Msa1400850:CDS | 55.0% | |
| !! | CGCACATTTGGCTCTGGAGA+AGG | + | tig0022477:56024-56043 | Msa1400850:CDS | 55.0% |
| AATAGATGGGTGTGGGCACC+GGG | - | tig0022477:56504-56523 | None:intergenic | 55.0% | |
| ! | ACCCATCCATCTGTGCCACT+GGG | + | tig0022477:57341-57360 | Msa1400850:intron | 55.0% |
| ATATGCCCCAGTGGCACAGA+TGG | - | tig0022477:57350-57369 | None:intergenic | 55.0% | |
| ACCACAAGTCCACTGCACCA+AGG | + | tig0022477:59350-59369 | Msa1400850:intron | 55.0% | |
| ! | ACCTTGGTGCAGTGGACTTG+TGG | - | tig0022477:59354-59373 | None:intergenic | 55.0% |
| GTCCACTGCACCAAGGTTTC+AGG | + | tig0022477:59357-59376 | Msa1400850:intron | 55.0% | |
| ! | GGTCCCCATTTTCCAGTTGG+TGG | - | tig0022477:59501-59520 | None:intergenic | 55.0% |
| TTCCCACGGATTCCATGAGC+TGG | + | tig0022477:59545-59564 | Msa1400850:intron | 55.0% | |
| TGCCAGCTCATGGAATCCGT+GGG | - | tig0022477:59550-59569 | None:intergenic | 55.0% | |
| !! | GCAGGCTTGTTGCTTCACGT+TGG | + | tig0022477:59980-59999 | Msa1400850:CDS | 55.0% |
| GCACAACAGATGACCCTTCG+TGG | + | tig0022477:60330-60349 | Msa1400850:CDS | 55.0% | |
| ! | CTGACTGATTCACGGGTGTC+TGG | - | tig0022477:60409-60428 | None:intergenic | 55.0% |
| CAGACACCCGTGAATCAGTC+AGG | + | tig0022477:60407-60426 | Msa1400850:CDS | 55.0% | |
| ! | CCCCTATAAACAGGCTAGCC+AGG | + | tig0022477:60909-60928 | Msa1400850:CDS | 55.0% |
| ! | TAAACAGGCTAGCCAGGAGG+AGG | + | tig0022477:60915-60934 | Msa1400850:CDS | 55.0% |
| ! | AAACAGGCTAGCCAGGAGGA+GGG | + | tig0022477:60916-60935 | Msa1400850:CDS | 55.0% |
| !! | CAGGCGCTGGGACAAATTTG+AGG | + | tig0022477:61097-61116 | Msa1400850:intron | 55.0% |
| TGAACCAAGCCGTTGCGAGT+AGG | + | tig0022477:61743-61762 | Msa1400850:intron | 55.0% | |
| GAACCAAGCCGTTGCGAGTA+GGG | + | tig0022477:61744-61763 | Msa1400850:intron | 55.0% | |
| AATCCCTACTCGCAACGGCT+TGG | - | tig0022477:61750-61769 | None:intergenic | 55.0% | |
| AGGCCCATGAGACAGCAATC+AGG | - | tig0022477:61849-61868 | None:intergenic | 55.0% | |
| TTGCTGTCTCATGGGCCTCA+TGG | + | tig0022477:61851-61870 | Msa1400850:intron | 55.0% | |
| GTTAGGGAGCTCCTAGGACT+AGG | + | tig0022477:62258-62277 | Msa1400850:three_prime_UTR | 55.0% | |
| CCAAACACGCTCCTAGTCCT+AGG | - | tig0022477:62272-62291 | None:intergenic | 55.0% | |
| ! | CCTAGGACTAGGAGCGTGTT+TGG | + | tig0022477:62269-62288 | Msa1400850:three_prime_UTR | 55.0% |
| !! | GAGCGTGTTTGGCTTTGGGT+TGG | + | tig0022477:62280-62299 | Msa1400850:three_prime_UTR | 55.0% |
| GGGGAGCGATTCCGAGGAAT+GGG | - | tig0022477:54587-54606 | None:intergenic | 60.0% | |
| TGGGGAGCGATTCCGAGGAA+TGG | - | tig0022477:54588-54607 | None:intergenic | 60.0% | |
| TTCCTCGGAATCGCTCCCCA+AGG | + | tig0022477:54588-54607 | Msa1400850:CDS | 60.0% | |
| AACCTTGGGGAGCGATTCCG+AGG | - | tig0022477:54593-54612 | None:intergenic | 60.0% | |
| !! | CAGGTTCATCGGTGCCATCG+GGG | - | tig0022477:54795-54814 | None:intergenic | 60.0% |
| !! | CCAGGTTCATCGGTGCCATC+GGG | - | tig0022477:54796-54815 | None:intergenic | 60.0% |
| AGAGGGCTCTCCGGTTGATC+AGG | + | tig0022477:57034-57053 | Msa1400850:CDS | 60.0% | |
| CACCCATCCATCTGTGCCAC+TGG | + | tig0022477:57340-57359 | Msa1400850:intron | 60.0% | |
| CCCCAGTGGCACAGATGGAT+GGG | - | tig0022477:57345-57364 | None:intergenic | 60.0% | |
| ! | CCCATCCATCTGTGCCACTG+GGG | + | tig0022477:57342-57361 | Msa1400850:intron | 60.0% |
| CGAGTGATGTGACCTGCGAG+TGG | - | tig0022477:59250-59269 | None:intergenic | 60.0% | |
| GTGCCAGCTCATGGAATCCG+TGG | - | tig0022477:59551-59570 | None:intergenic | 60.0% | |
| GGTGGGATTGTGCCAGCTCA+TGG | - | tig0022477:59560-59579 | None:intergenic | 60.0% | |
| GGCCATTCCACCACCCGTTT+GGG | + | tig0022477:60937-60956 | Msa1400850:CDS | 60.0% | |
| GCCATTCCACCACCCGTTTG+GGG | + | tig0022477:60938-60957 | Msa1400850:CDS | 60.0% | |
| !! | ACCCCAAACGGGTGGTGGAA+TGG | - | tig0022477:60942-60961 | None:intergenic | 60.0% |
| ! | TCCACCACCCGTTTGGGGTA+AGG | + | tig0022477:60943-60962 | Msa1400850:intron | 60.0% |
| ACCTTACCCCAAACGGGTGG+TGG | - | tig0022477:60947-60966 | None:intergenic | 60.0% | |
| TGTCTCATGGGCCTCATGGC+AGG | + | tig0022477:61855-61874 | Msa1400850:intron | 60.0% | |
| TTCCTGACAAAGGGCTGGGG+TGG | - | tig0022477:61897-61916 | None:intergenic | 60.0% | |
| GTTGGGGTTAGGGAGCTCCT+AGG | + | tig0022477:62252-62271 | Msa1400850:three_prime_UTR | 60.0% | |
| !! | CCCGATGGCACCGATGAACC+TGG | + | tig0022477:54793-54812 | Msa1400850:CDS | 65.0% |
| GCCCCAGTGGCACAGATGGA+TGG | - | tig0022477:57346-57365 | None:intergenic | 65.0% | |
| TGGTGGAATGGCCCTCCTCC+TGG | - | tig0022477:60930-60949 | None:intergenic | 65.0% | |
| GGGCCATTCCACCACCCGTT+TGG | + | tig0022477:60936-60955 | Msa1400850:CDS | 65.0% | |
| GGTACATCGGCGTGTCCGCG+TGG | + | tig0022477:54904-54923 | Msa1400850:intron | 70.0% | |
| GGCCACCCCAGCCCTTTGTC+AGG | + | tig0022477:61892-61911 | Msa1400850:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022477 | gene | 54239 | 62772 | 54239 | ID=Msa1400850;Name=Msa1400850 |
| tig0022477 | mRNA | 54239 | 62772 | 54239 | ID=Msa1400850-mRNA-1;Parent=Msa1400850;Name=Msa1400850-mRNA-1;_AED=0.11;_eAED=0.11;_QI=262|1|1|1|0.93|0.88|17|623|629 |
| tig0022477 | exon | 54239 | 54609 | 54239 | ID=Msa1400850-mRNA-1:exon:17936;Parent=Msa1400850-mRNA-1 |
| tig0022477 | exon | 54698 | 54814 | 54698 | ID=Msa1400850-mRNA-1:exon:17937;Parent=Msa1400850-mRNA-1 |
| tig0022477 | exon | 54905 | 55000 | 54905 | ID=Msa1400850-mRNA-1:exon:17938;Parent=Msa1400850-mRNA-1 |
| tig0022477 | exon | 55876 | 56115 | 55876 | ID=Msa1400850-mRNA-1:exon:17939;Parent=Msa1400850-mRNA-1 |
| tig0022477 | exon | 56826 | 57055 | 56826 | ID=Msa1400850-mRNA-1:exon:17940;Parent=Msa1400850-mRNA-1 |
| tig0022477 | exon | 57486 | 57581 | 57486 | ID=Msa1400850-mRNA-1:exon:17941;Parent=Msa1400850-mRNA-1 |
| tig0022477 | exon | 57714 | 57806 | 57714 | ID=Msa1400850-mRNA-1:exon:17942;Parent=Msa1400850-mRNA-1 |
| tig0022477 | exon | 59931 | 60240 | 59931 | ID=Msa1400850-mRNA-1:exon:17943;Parent=Msa1400850-mRNA-1 |
| tig0022477 | exon | 60324 | 60428 | 60324 | ID=Msa1400850-mRNA-1:exon:17944;Parent=Msa1400850-mRNA-1 |
| tig0022477 | exon | 60507 | 60608 | 60507 | ID=Msa1400850-mRNA-1:exon:17945;Parent=Msa1400850-mRNA-1 |
| tig0022477 | exon | 60713 | 60770 | 60713 | ID=Msa1400850-mRNA-1:exon:17946;Parent=Msa1400850-mRNA-1 |
| tig0022477 | exon | 60891 | 60959 | 60891 | ID=Msa1400850-mRNA-1:exon:17947;Parent=Msa1400850-mRNA-1 |
| tig0022477 | exon | 61100 | 61187 | 61100 | ID=Msa1400850-mRNA-1:exon:17948;Parent=Msa1400850-mRNA-1 |
| tig0022477 | exon | 61699 | 61760 | 61699 | ID=Msa1400850-mRNA-1:exon:17949;Parent=Msa1400850-mRNA-1 |
| tig0022477 | exon | 61877 | 61928 | 61877 | ID=Msa1400850-mRNA-1:exon:17950;Parent=Msa1400850-mRNA-1 |
| tig0022477 | exon | 62010 | 62094 | 62010 | ID=Msa1400850-mRNA-1:exon:17951;Parent=Msa1400850-mRNA-1 |
| tig0022477 | exon | 62172 | 62772 | 62172 | ID=Msa1400850-mRNA-1:exon:17952;Parent=Msa1400850-mRNA-1 |
| tig0022477 | five_prime_UTR | 54239 | 54500 | 54239 | ID=Msa1400850-mRNA-1:five_prime_utr;Parent=Msa1400850-mRNA-1 |
| tig0022477 | CDS | 54501 | 54609 | 54501 | ID=Msa1400850-mRNA-1:cds;Parent=Msa1400850-mRNA-1 |
| tig0022477 | CDS | 54698 | 54814 | 54698 | ID=Msa1400850-mRNA-1:cds;Parent=Msa1400850-mRNA-1 |
| tig0022477 | CDS | 54905 | 55000 | 54905 | ID=Msa1400850-mRNA-1:cds;Parent=Msa1400850-mRNA-1 |
| tig0022477 | CDS | 55876 | 56115 | 55876 | ID=Msa1400850-mRNA-1:cds;Parent=Msa1400850-mRNA-1 |
| tig0022477 | CDS | 56826 | 57055 | 56826 | ID=Msa1400850-mRNA-1:cds;Parent=Msa1400850-mRNA-1 |
| tig0022477 | CDS | 57486 | 57581 | 57486 | ID=Msa1400850-mRNA-1:cds;Parent=Msa1400850-mRNA-1 |
| tig0022477 | CDS | 57714 | 57806 | 57714 | ID=Msa1400850-mRNA-1:cds;Parent=Msa1400850-mRNA-1 |
| tig0022477 | CDS | 59931 | 60240 | 59931 | ID=Msa1400850-mRNA-1:cds;Parent=Msa1400850-mRNA-1 |
| tig0022477 | CDS | 60324 | 60428 | 60324 | ID=Msa1400850-mRNA-1:cds;Parent=Msa1400850-mRNA-1 |
| tig0022477 | CDS | 60507 | 60608 | 60507 | ID=Msa1400850-mRNA-1:cds;Parent=Msa1400850-mRNA-1 |
| tig0022477 | CDS | 60713 | 60770 | 60713 | ID=Msa1400850-mRNA-1:cds;Parent=Msa1400850-mRNA-1 |
| tig0022477 | CDS | 60891 | 60959 | 60891 | ID=Msa1400850-mRNA-1:cds;Parent=Msa1400850-mRNA-1 |
| tig0022477 | CDS | 61100 | 61187 | 61100 | ID=Msa1400850-mRNA-1:cds;Parent=Msa1400850-mRNA-1 |
| tig0022477 | CDS | 61699 | 61760 | 61699 | ID=Msa1400850-mRNA-1:cds;Parent=Msa1400850-mRNA-1 |
| tig0022477 | CDS | 61877 | 61928 | 61877 | ID=Msa1400850-mRNA-1:cds;Parent=Msa1400850-mRNA-1 |
| tig0022477 | CDS | 62010 | 62072 | 62010 | ID=Msa1400850-mRNA-1:cds;Parent=Msa1400850-mRNA-1 |
| tig0022477 | three_prime_UTR | 62073 | 62094 | 62073 | ID=Msa1400850-mRNA-1:three_prime_utr;Parent=Msa1400850-mRNA-1 |
| tig0022477 | three_prime_UTR | 62172 | 62772 | 62172 | ID=Msa1400850-mRNA-1:three_prime_utr;Parent=Msa1400850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
