Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0695240 | QDX01714.1 | 99.687 | 319 | 1 | 0 | 1 | 319 | 1 | 319 | 0.0 | 667 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0695240 | sp|F4HY61|NAC10_ARATH | 59.271 | 329 | 96 | 12 | 1 | 314 | 1 | 306 | 1.14e-119 | 349 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0695240 | A0A6B7JET0 | 99.687 | 319 | 1 | 0 | 1 | 319 | 1 | 319 | 0.0 | 667 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0695240 | TF | NAC |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0557350 | Msa0695240 | 0.897057 | 2.032183e-76 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0695240 | MtrunA17_Chr4g0046431 | 96.865 | 319 | 9 | 1 | 1 | 319 | 1 | 318 | 0.0 | 643 |
| Msa0695240 | MtrunA17_Chr8g0367761 | 98.655 | 223 | 3 | 0 | 1 | 223 | 1 | 223 | 1.58e-166 | 463 |
| Msa0695240 | MtrunA17_Chr2g0282871 | 61.538 | 325 | 91 | 8 | 1 | 314 | 1 | 302 | 5.40e-137 | 390 |
| Msa0695240 | MtrunA17_Chr4g0040541 | 65.568 | 273 | 83 | 6 | 29 | 295 | 10 | 277 | 2.77e-122 | 352 |
| Msa0695240 | MtrunA17_Chr2g0324961 | 66.431 | 283 | 83 | 8 | 27 | 305 | 10 | 284 | 2.17e-119 | 345 |
| Msa0695240 | MtrunA17_Chr8g0389661 | 71.078 | 204 | 46 | 5 | 47 | 241 | 30 | 229 | 1.40e-95 | 291 |
| Msa0695240 | MtrunA17_Chr5g0422431 | 58.081 | 198 | 80 | 2 | 44 | 241 | 36 | 230 | 3.02e-75 | 238 |
| Msa0695240 | MtrunA17_Chr1g0198751 | 55.721 | 201 | 86 | 2 | 44 | 244 | 36 | 233 | 1.19e-71 | 229 |
| Msa0695240 | MtrunA17_Chr7g0227071 | 55.978 | 184 | 74 | 3 | 47 | 227 | 36 | 215 | 7.32e-65 | 212 |
| Msa0695240 | MtrunA17_Chr1g0198741 | 52.846 | 123 | 58 | 0 | 123 | 245 | 7 | 129 | 9.26e-38 | 135 |
| Msa0695240 | MtrunA17_Chr6g0484441 | 30.159 | 189 | 109 | 6 | 68 | 249 | 5 | 177 | 1.06e-15 | 76.6 |
| Msa0695240 | MtrunA17_Chr6g0461661 | 31.481 | 216 | 102 | 11 | 68 | 267 | 18 | 203 | 4.01e-15 | 75.5 |
| Msa0695240 | MtrunA17_Chr3g0091921 | 30.952 | 168 | 93 | 5 | 68 | 228 | 16 | 167 | 1.04e-14 | 73.6 |
| Msa0695240 | MtrunA17_Chr6g0453451 | 31.690 | 142 | 80 | 4 | 68 | 208 | 20 | 145 | 1.92e-14 | 72.8 |
| Msa0695240 | MtrunA17_Chr3g0139331 | 30.286 | 175 | 99 | 7 | 56 | 225 | 1 | 157 | 2.89e-13 | 69.7 |
| Msa0695240 | MtrunA17_Chr2g0318101 | 29.012 | 162 | 96 | 5 | 54 | 212 | 1 | 146 | 2.13e-12 | 67.0 |
| Msa0695240 | MtrunA17_Chr2g0316971 | 30.994 | 171 | 91 | 7 | 68 | 228 | 23 | 176 | 3.10e-12 | 66.6 |
| Msa0695240 | MtrunA17_Chr7g0214071 | 28.571 | 175 | 98 | 9 | 68 | 237 | 15 | 167 | 2.81e-11 | 62.8 |
| Msa0695240 | MtrunA17_Chr3g0124761 | 31.034 | 145 | 78 | 6 | 68 | 209 | 7 | 132 | 3.16e-11 | 63.2 |
| Msa0695240 | MtrunA17_Chr8g0384721 | 29.861 | 144 | 83 | 5 | 68 | 210 | 7 | 133 | 7.80e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0695240 | AT1G28470.1 | 59.271 | 329 | 96 | 12 | 1 | 314 | 1 | 306 | 1.16e-120 | 349 |
| Msa0695240 | AT4G28500.1 | 70.886 | 237 | 59 | 5 | 1 | 236 | 1 | 228 | 1.47e-118 | 344 |
| Msa0695240 | AT4G29230.3 | 70.500 | 200 | 47 | 2 | 47 | 238 | 31 | 226 | 6.64e-99 | 298 |
| Msa0695240 | AT4G29230.1 | 70.500 | 200 | 47 | 2 | 47 | 238 | 31 | 226 | 2.47e-98 | 299 |
| Msa0695240 | AT4G29230.2 | 70.500 | 200 | 46 | 2 | 47 | 238 | 31 | 225 | 1.02e-97 | 297 |
| Msa0695240 | AT5G56620.2 | 65.672 | 201 | 55 | 4 | 47 | 236 | 25 | 222 | 2.77e-89 | 273 |
| Msa0695240 | AT5G56620.3 | 65.672 | 201 | 55 | 4 | 47 | 236 | 25 | 222 | 4.40e-89 | 273 |
| Msa0695240 | AT5G56620.1 | 65.672 | 201 | 55 | 4 | 47 | 236 | 25 | 222 | 4.91e-89 | 271 |
| Msa0695240 | AT1G25580.1 | 58.602 | 186 | 68 | 4 | 47 | 232 | 39 | 215 | 2.93e-69 | 223 |
| Msa0695240 | AT5G14490.2 | 49.206 | 189 | 91 | 4 | 45 | 232 | 34 | 218 | 1.62e-55 | 182 |
| Msa0695240 | AT5G14490.1 | 49.206 | 189 | 91 | 4 | 45 | 232 | 37 | 221 | 1.90e-55 | 184 |
| Msa0695240 | AT5G14490.4 | 49.206 | 189 | 91 | 4 | 45 | 232 | 34 | 218 | 2.05e-55 | 184 |
| Msa0695240 | AT5G14490.3 | 49.206 | 189 | 91 | 4 | 45 | 232 | 37 | 221 | 2.78e-55 | 184 |
| Msa0695240 | AT3G01600.1 | 48.387 | 186 | 92 | 3 | 45 | 229 | 34 | 216 | 4.70e-52 | 176 |
| Msa0695240 | AT3G04060.1 | 33.149 | 181 | 97 | 6 | 58 | 230 | 10 | 174 | 3.02e-19 | 87.4 |
| Msa0695240 | AT5G18270.2 | 34.078 | 179 | 92 | 7 | 61 | 230 | 14 | 175 | 1.17e-16 | 79.7 |
| Msa0695240 | AT5G18270.1 | 34.078 | 179 | 92 | 7 | 61 | 230 | 14 | 175 | 1.91e-16 | 79.3 |
| Msa0695240 | AT3G18400.1 | 31.481 | 162 | 91 | 5 | 68 | 225 | 5 | 150 | 3.22e-15 | 75.5 |
| Msa0695240 | AT5G07680.2 | 32.143 | 168 | 91 | 5 | 68 | 228 | 3 | 154 | 4.41e-15 | 75.1 |
| Msa0695240 | AT5G07680.1 | 32.143 | 168 | 91 | 5 | 68 | 228 | 17 | 168 | 5.22e-15 | 75.1 |
| Msa0695240 | AT5G61430.1 | 30.357 | 168 | 94 | 5 | 68 | 228 | 16 | 167 | 3.46e-14 | 72.8 |
| Msa0695240 | AT1G33060.1 | 30.539 | 167 | 93 | 7 | 55 | 217 | 11 | 158 | 4.75e-13 | 70.1 |
| Msa0695240 | AT1G33060.2 | 30.539 | 167 | 93 | 7 | 55 | 217 | 11 | 158 | 5.03e-13 | 70.1 |
| Msa0695240 | AT1G01720.1 | 30.201 | 149 | 86 | 5 | 62 | 209 | 1 | 132 | 2.23e-12 | 67.0 |
| Msa0695240 | AT1G76420.1 | 29.630 | 189 | 103 | 8 | 67 | 247 | 21 | 187 | 5.32e-12 | 66.2 |
| Msa0695240 | AT4G35580.3 | 30.000 | 150 | 86 | 6 | 61 | 207 | 2 | 135 | 1.14e-11 | 65.9 |
| Msa0695240 | AT4G35580.2 | 30.000 | 150 | 86 | 6 | 61 | 207 | 2 | 135 | 1.20e-11 | 65.9 |
| Msa0695240 | AT4G35580.1 | 30.000 | 150 | 86 | 6 | 61 | 207 | 2 | 135 | 1.48e-11 | 65.5 |
| Msa0695240 | AT1G02230.1 | 32.432 | 148 | 77 | 6 | 69 | 210 | 4 | 134 | 8.67e-11 | 62.8 |
Find 105 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACCATGTTGGTCATAATT+TGG | 0.115945 | 4_4:+64696769 | Msa0695240:CDS |
| TAACCAAGTTTGGAATAAAT+TGG | 0.141092 | 4_4:-64696805 | None:intergenic |
| AATAGCAATAATAATATTAT+TGG | 0.195471 | 4_4:-64697002 | None:intergenic |
| TGCAGTATCCTTGATAATAT+TGG | 0.229118 | 4_4:-64696651 | None:intergenic |
| GTATATTTATTCTATATATA+TGG | 0.248593 | 4_4:+64697068 | Msa0695240:three_prime_UTR |
| CATGTCATGATCTCTTTAAT+TGG | 0.278177 | 4_4:-64693774 | None:intergenic |
| TTCCCTGAATCACCTCTTAT+AGG | 0.278891 | 4_4:-64693549 | None:intergenic |
| CCTGTTGTGTATGCTTTAGA+TGG | 0.308469 | 4_4:-64696347 | None:intergenic |
| CAATGAACTGCCGGGTTTAC+CGG | 0.310248 | 4_4:+64694172 | Msa0695240:CDS |
| GTACTTTCATTGCTAGTTCC+AGG | 0.310383 | 4_4:-64693855 | None:intergenic |
| GACCATGTTGGTCATAATTT+GGG | 0.314192 | 4_4:+64696770 | Msa0695240:CDS |
| GATACTGCAAGTTATGAAAA+TGG | 0.315715 | 4_4:+64696665 | Msa0695240:CDS |
| GACCACATGAGGGGCAAGTT+AGG | 0.316155 | 4_4:-64693920 | None:intergenic |
| ATCAATAAGAGGATGAAGTT+TGG | 0.318163 | 4_4:-64694267 | None:intergenic |
| TCACCTTGCATAACCAAGTT+TGG | 0.330649 | 4_4:-64696815 | None:intergenic |
| GGTAGATTATTAATGTATAA+TGG | 0.333418 | 4_4:+64696917 | Msa0695240:three_prime_UTR |
| TTCCATTCTCTTCCTATAAG+AGG | 0.351549 | 4_4:+64693537 | Msa0695240:five_prime_UTR |
| GAGACAAGATGGCACAAAAC+AGG | 0.362354 | 4_4:+64696413 | Msa0695240:CDS |
| AACCAAGTTTGGAATAAATT+GGG | 0.365436 | 4_4:-64696804 | None:intergenic |
| TCAAGAGATACTTCAGCATT+TGG | 0.367315 | 4_4:+64694220 | Msa0695240:CDS |
| AAAATTAAAATACCTGATCT+TGG | 0.368647 | 4_4:-64693956 | None:intergenic |
| CTAGTCCTCTACACCAACTA+TGG | 0.382144 | 4_4:+64696488 | Msa0695240:CDS |
| AATCATATAGAATAAGTGTT+AGG | 0.386827 | 4_4:+64693509 | Msa0695240:five_prime_UTR |
| AAGGAATGAGGCAAAGGGAG+AGG | 0.389085 | 4_4:-64693421 | None:intergenic |
| GAGGAGCTTCATTATCATCT+TGG | 0.390234 | 4_4:-64696712 | None:intergenic |
| TATAGCTACATAGATGTTGA+TGG | 0.397210 | 4_4:+64696946 | Msa0695240:three_prime_UTR |
| ATGACTCAGATGATCAAGAT+AGG | 0.398851 | 4_4:+64693802 | Msa0695240:CDS |
| ATCCCAATTTATTCCAAACT+TGG | 0.402709 | 4_4:+64696802 | Msa0695240:CDS |
| ATCCATTGCCAATCGAATAA+AGG | 0.406204 | 4_4:-64696846 | None:intergenic |
| TCAATAAGAGGATGAAGTTT+GGG | 0.408567 | 4_4:-64694266 | None:intergenic |
| AGGAATGAGGCAAAGGGAGA+GGG | 0.412221 | 4_4:-64693420 | None:intergenic |
| CACATTGTCGAGGCTGTGTC+TGG | 0.424638 | 4_4:-64696616 | None:intergenic |
| ATCACCCAATTGGTCTTCTC+AGG | 0.424780 | 4_4:-64696524 | None:intergenic |
| ATAACATCTACTGTTATTCC+TGG | 0.425471 | 4_4:+64693837 | Msa0695240:CDS |
| CCGTTCTCTCCTTCAAGTGT+TGG | 0.428976 | 4_4:-64694299 | None:intergenic |
| GCAATGGATGCAAACAAAGC+TGG | 0.432392 | 4_4:+64696860 | Msa0695240:CDS |
| AGAAGCCTGAGAAGACCAAT+TGG | 0.446907 | 4_4:+64696519 | Msa0695240:CDS |
| TGGCTCTTCCTTTATTCGAT+TGG | 0.446932 | 4_4:+64696838 | Msa0695240:CDS |
| TGAAGTATCTCTTGATCATT+CGG | 0.452486 | 4_4:-64694212 | None:intergenic |
| TTCCTTTATTCGATTGGCAA+TGG | 0.456787 | 4_4:+64696844 | Msa0695240:CDS |
| GGAATGAGGCAAAGGGAGAG+GGG | 0.461441 | 4_4:-64693419 | None:intergenic |
| AAGAGAAGGAATGAGGCAAA+GGG | 0.467082 | 4_4:-64693426 | None:intergenic |
| ACCACATGAGGGGCAAGTTA+GGG | 0.470434 | 4_4:-64693919 | None:intergenic |
| CCATCTAAAGCATACACAAC+AGG | 0.476509 | 4_4:+64696347 | Msa0695240:CDS |
| TAACATTGAATTCCAAGATC+AGG | 0.478563 | 4_4:+64693944 | Msa0695240:CDS |
| GAAGAGAAGGAATGAGGCAA+AGG | 0.478812 | 4_4:-64693427 | None:intergenic |
| GGGTGGAATCAATGAACTGC+CGG | 0.482156 | 4_4:+64694163 | Msa0695240:intron |
| TGATAATGAAGCTCCTCCTA+TGG | 0.487564 | 4_4:+64696718 | Msa0695240:CDS |
| GCCTTCCATAGTTGGTGTAG+AGG | 0.488969 | 4_4:-64696493 | None:intergenic |
| TTTATTGATGGTGTTATGAA+AGG | 0.492139 | 4_4:+64696452 | Msa0695240:CDS |
| TTCATAAATTATGACCATGT+TGG | 0.496915 | 4_4:+64696758 | Msa0695240:CDS |
| GAGTTCATACCAACACTTGA+AGG | 0.498892 | 4_4:+64694290 | Msa0695240:CDS |
| ACTTCAGCATTTGGAAGCAA+AGG | 0.499727 | 4_4:+64694229 | Msa0695240:CDS |
| GCAAGTTAGGGTTCGAACTT+CGG | 0.505146 | 4_4:-64693907 | None:intergenic |
| TGGCGAATTAGTTGTTTCAA+AGG | 0.512048 | 4_4:+64696586 | Msa0695240:CDS |
| CACCTCTTATAGGAAGAGAA+TGG | 0.516751 | 4_4:-64693539 | None:intergenic |
| GTATTGATGCATCACCCAAT+TGG | 0.519499 | 4_4:-64696534 | None:intergenic |
| TGACTCAGATGATCAAGATA+GGG | 0.524395 | 4_4:+64693803 | Msa0695240:CDS |
| GAGAGAGAAGAGAAGGAATG+AGG | 0.524402 | 4_4:-64693433 | None:intergenic |
| AATGGACTGATGATAAATCA+AGG | 0.525858 | 4_4:+64696683 | Msa0695240:CDS |
| AAATAATTCCAATATTATCA+AGG | 0.530116 | 4_4:+64696643 | Msa0695240:CDS |
| GGTATGAACTCATCAATAAG+AGG | 0.531878 | 4_4:-64694278 | None:intergenic |
| TTCACTCCTGCCGGTAAACC+CGG | 0.532548 | 4_4:-64694182 | None:intergenic |
| AGATCCGGCACTTCTTTCAC+AGG | 0.536068 | 4_4:+64696324 | Msa0695240:CDS |
| ATTCCAAACTTGGTTATGCA+AGG | 0.537547 | 4_4:+64696812 | Msa0695240:CDS |
| GGATCAAACTTCACTCCTGC+CGG | 0.537711 | 4_4:-64694191 | None:intergenic |
| TCTCCTCTTCATTACTACCA+AGG | 0.544705 | 4_4:-64696559 | None:intergenic |
| AGTAATGAAGAGGAGAAAGA+TGG | 0.548039 | 4_4:+64696566 | Msa0695240:CDS |
| GTTAGGGTTCGAACTTCGGT+TGG | 0.551703 | 4_4:-64693903 | None:intergenic |
| GTCATAAAGAAAATAAATGT+GGG | 0.553867 | 4_4:-64693391 | None:intergenic |
| GAACTGCCGGGTTTACCGGC+AGG | 0.555398 | 4_4:+64694176 | Msa0695240:CDS |
| ATATTTGTTGTAGGGTGGTG+TGG | 0.556762 | 4_4:+64693706 | Msa0695240:intron |
| AAGGTTCAAACTGATGAAGA+AGG | 0.557893 | 4_4:+64696386 | Msa0695240:CDS |
| TGAGAATTGTAGTAATCCAT+AGG | 0.559542 | 4_4:-64696734 | None:intergenic |
| AGTCATAAAGAAAATAAATG+TGG | 0.560838 | 4_4:-64693392 | None:intergenic |
| AAGAAGGAAGTGAGACAAGA+TGG | 0.561201 | 4_4:+64696402 | Msa0695240:CDS |
| GAAGCCTGAGAAGACCAATT+GGG | 0.561745 | 4_4:+64696520 | Msa0695240:CDS |
| ATGGCCTGTGAAAGAAGTGC+CGG | 0.564511 | 4_4:-64696328 | None:intergenic |
| TTCAATGTTATGACCACATG+AGG | 0.566477 | 4_4:-64693931 | None:intergenic |
| AGGAACAAGGAAAAGAAGAA+AGG | 0.568088 | 4_4:+64696367 | Msa0695240:CDS |
| AAATAAATGTGGGACTCAAG+TGG | 0.568834 | 4_4:-64693381 | None:intergenic |
| ATTTATATTAGAGAAAATTG+AGG | 0.574390 | 4_4:+64697091 | Msa0695240:three_prime_UTR |
| CAATGGATGCAAACAAAGCT+GGG | 0.577780 | 4_4:+64696861 | Msa0695240:CDS |
| TCCTCTACACCAACTATGGA+AGG | 0.579155 | 4_4:+64696492 | Msa0695240:CDS |
| AACTTGGTTATGCAAGGTGA+TGG | 0.581693 | 4_4:+64696818 | Msa0695240:CDS |
| AATAAATGTGGGACTCAAGT+GGG | 0.581931 | 4_4:-64693380 | None:intergenic |
| GGTGGAATCAATGAACTGCC+GGG | 0.589992 | 4_4:+64694164 | Msa0695240:CDS |
| ACACATCCAGAAAAGCTACC+AGG | 0.603148 | 4_4:+64694332 | Msa0695240:CDS |
| CCACCTTGGTAGTAATGAAG+AGG | 0.607416 | 4_4:+64696556 | Msa0695240:CDS |
| ACCCTAACTTGCCCCTCATG+TGG | 0.615492 | 4_4:+64693918 | Msa0695240:CDS |
| AGACAAGATGGCACAAAACA+GGG | 0.622480 | 4_4:+64696414 | Msa0695240:CDS |
| AAGCATACACAACAGGAACA+AGG | 0.626885 | 4_4:+64696354 | Msa0695240:CDS |
| TTATTTCCACCACATTGTCG+AGG | 0.627002 | 4_4:-64696626 | None:intergenic |
| TATATGATTGAAGTGCAAAG+AGG | 0.627327 | 4_4:-64693495 | None:intergenic |
| TCAATGTTATGACCACATGA+GGG | 0.632214 | 4_4:-64693930 | None:intergenic |
| CCAACACTTGAAGGAGAGAA+CGG | 0.633139 | 4_4:+64694299 | Msa0695240:CDS |
| GACTCAGATGATCAAGATAG+GGG | 0.637363 | 4_4:+64693804 | Msa0695240:CDS |
| ACACAGCCTCGACAATGTGG+TGG | 0.657333 | 4_4:+64696620 | Msa0695240:CDS |
| CAATGTTATGACCACATGAG+GGG | 0.657544 | 4_4:-64693929 | None:intergenic |
| CCTCTTCATTACTACCAAGG+TGG | 0.661569 | 4_4:-64696556 | None:intergenic |
| GAATTGTAGTAATCCATAGG+AGG | 0.664154 | 4_4:-64696731 | None:intergenic |
| GTGATGCATCAATACCACCT+TGG | 0.670736 | 4_4:+64696542 | Msa0695240:CDS |
| CAGACACAGCCTCGACAATG+TGG | 0.682956 | 4_4:+64696617 | Msa0695240:CDS |
| CAATTAAAGAGATCATGACA+TGG | 0.684251 | 4_4:+64693775 | Msa0695240:exon |
| TTCCCAAATTATGACCAACA+TGG | 0.685630 | 4_4:-64696772 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAATATATACTCTTTTTT+TGG | + | chr4_4:64694705-64694724 | Msa0695240:intron | 10.0% |
| !! | AAATTTATTTCCAAATAAAA+TGG | + | chr4_4:64696069-64696088 | Msa0695240:intron | 10.0% |
| !! | AATAGCAATAATAATATTAT+TGG | - | chr4_4:64697005-64697024 | None:intergenic | 10.0% |
| !! | GTATATTTATTCTATATATA+TGG | + | chr4_4:64697068-64697087 | Msa0695240:three_prime_UTR | 10.0% |
| !! | AGGAAAAAATAAAAGAAAAA+GGG | - | chr4_4:64693611-64693630 | None:intergenic | 15.0% |
| !! | AAGGAAAAAATAAAAGAAAA+AGG | - | chr4_4:64693612-64693631 | None:intergenic | 15.0% |
| !!! | TTCTTTCTTGTTTTTTTTTT+TGG | + | chr4_4:64693653-64693672 | Msa0695240:intron | 15.0% |
| !!! | TTTTGGATTATTACTAATTT+TGG | + | chr4_4:64693670-64693689 | Msa0695240:intron | 15.0% |
| !! | AATTAAAAAAACACAAACAA+GGG | - | chr4_4:64694003-64694022 | None:intergenic | 15.0% |
| !! | TAATTAAAAAAACACAAACA+AGG | - | chr4_4:64694004-64694023 | None:intergenic | 15.0% |
| !!! | TTTTTTATAACACTTTTTGA+AGG | + | chr4_4:64694576-64694595 | Msa0695240:intron | 15.0% |
| !!! | AAAAAAATAGCTGTATTTTT+TGG | - | chr4_4:64694652-64694671 | None:intergenic | 15.0% |
| !! | TTGATTATATTTAACTCATA+AGG | + | chr4_4:64695306-64695325 | Msa0695240:intron | 15.0% |
| !! | AAATAATTCCAATATTATCA+AGG | + | chr4_4:64696643-64696662 | Msa0695240:CDS | 15.0% |
| !! | ATTTATATTAGAGAAAATTG+AGG | + | chr4_4:64697091-64697110 | Msa0695240:three_prime_UTR | 15.0% |
| !! | GTCATAAAGAAAATAAATGT+GGG | - | chr4_4:64693394-64693413 | None:intergenic | 20.0% |
| !! | AGTCATAAAGAAAATAAATG+TGG | - | chr4_4:64693395-64693414 | None:intergenic | 20.0% |
| !! | AATCATATAGAATAAGTGTT+AGG | + | chr4_4:64693509-64693528 | Msa0695240:five_prime_UTR | 20.0% |
| !!! | TGTTTTTATGTTGATAGAAT+TGG | + | chr4_4:64693745-64693764 | Msa0695240:five_prime_UTR | 20.0% |
| !! | AAAATTAAAATACCTGATCT+TGG | - | chr4_4:64693959-64693978 | None:intergenic | 20.0% |
| !! | ATACAAGGTATATATTTCAT+AGG | - | chr4_4:64694852-64694871 | None:intergenic | 20.0% |
| !! | AATTTATTTAATAAAGACCC+TGG | + | chr4_4:64694940-64694959 | Msa0695240:intron | 20.0% |
| !! | TATACACTATTACTTAATCA+TGG | + | chr4_4:64695193-64695212 | Msa0695240:intron | 20.0% |
| !! | ATACACTATTACTTAATCAT+GGG | + | chr4_4:64695194-64695213 | Msa0695240:intron | 20.0% |
| !!! | AGTCATCTTTAATTTTTGTA+AGG | - | chr4_4:64695370-64695389 | None:intergenic | 20.0% |
| !!! | CTAATTTTTCTTTTTGGATT+CGG | - | chr4_4:64695822-64695841 | None:intergenic | 20.0% |
| !!! | TTGTCTCTAATTTTTCTTTT+TGG | - | chr4_4:64695828-64695847 | None:intergenic | 20.0% |
| !!! | TAATACATGACCATTTTATT+TGG | - | chr4_4:64696082-64696101 | None:intergenic | 20.0% |
| !!! | TACTATTTAACAACTTGTTT+TGG | + | chr4_4:64696100-64696119 | Msa0695240:intron | 20.0% |
| !!! | ACTATTTAACAACTTGTTTT+GGG | + | chr4_4:64696101-64696120 | Msa0695240:intron | 20.0% |
| !! | GGTAGATTATTAATGTATAA+TGG | + | chr4_4:64696917-64696936 | Msa0695240:three_prime_UTR | 20.0% |
| !!! | AATCTGTGATATTTGTTGTA+GGG | + | chr4_4:64693698-64693717 | Msa0695240:intron | 25.0% |
| ! | AGTAAAATGAAATTAAGACC+TGG | - | chr4_4:64694353-64694372 | None:intergenic | 25.0% |
| !!! | ATAACACTTTTTGAAGGAAA+CGG | + | chr4_4:64694582-64694601 | Msa0695240:intron | 25.0% |
| ! | AAGATCTATCAAAACATACA+AGG | - | chr4_4:64694867-64694886 | None:intergenic | 25.0% |
| ! | TGGTAAAATATCTTATTCCA+GGG | - | chr4_4:64694960-64694979 | None:intergenic | 25.0% |
| !! | TAAGATATTTTACCAGTCAA+AGG | + | chr4_4:64694965-64694984 | Msa0695240:intron | 25.0% |
| ! | AATTGTGTGTGATTATTCTT+TGG | + | chr4_4:64695047-64695066 | Msa0695240:intron | 25.0% |
| !! | TGTATCATGTGTTAATTTTC+AGG | - | chr4_4:64695236-64695255 | None:intergenic | 25.0% |
| !!! | CCTTTTGCTTTATTTTCATT+GGG | - | chr4_4:64695480-64695499 | None:intergenic | 25.0% |
| !!! | TCCTTTTGCTTTATTTTCAT+TGG | - | chr4_4:64695481-64695500 | None:intergenic | 25.0% |
| ! | ATGAAAATAAAGCAAAAGGA+AGG | + | chr4_4:64695481-64695500 | Msa0695240:intron | 25.0% |
| ! | TGACATGTGATTAATGTTTA+GGG | - | chr4_4:64695543-64695562 | None:intergenic | 25.0% |
| ! | TTGACATGTGATTAATGTTT+AGG | - | chr4_4:64695544-64695563 | None:intergenic | 25.0% |
| ! | AACTGCACATAATTATCAAA+AGG | + | chr4_4:64695574-64695593 | Msa0695240:intron | 25.0% |
| ! | ACTGCACATAATTATCAAAA+GGG | + | chr4_4:64695575-64695594 | Msa0695240:intron | 25.0% |
| ! | AAAAAATTAATTGCATCTCC+AGG | - | chr4_4:64695628-64695647 | None:intergenic | 25.0% |
| ! | AAGTAACAGATTGACATAAA+TGG | - | chr4_4:64695684-64695703 | None:intergenic | 25.0% |
| ! | GAGTTTAGATCTAAACAAAT+TGG | + | chr4_4:64696199-64696218 | Msa0695240:intron | 25.0% |
| ! | TGGTTTAGTCTAATGTTATT+AGG | + | chr4_4:64696219-64696238 | Msa0695240:intron | 25.0% |
| ! | GGTTTAGTCTAATGTTATTA+GGG | + | chr4_4:64696220-64696239 | Msa0695240:intron | 25.0% |
| ! | ATAACACCATCAATAAAAAC+TGG | - | chr4_4:64696449-64696468 | None:intergenic | 25.0% |
| !!! | TTTATTGATGGTGTTATGAA+AGG | + | chr4_4:64696452-64696471 | Msa0695240:CDS | 25.0% |
| ! | TTCATAAATTATGACCATGT+TGG | + | chr4_4:64696758-64696777 | Msa0695240:CDS | 25.0% |
| !! | AACCAAGTTTGGAATAAATT+GGG | - | chr4_4:64696807-64696826 | None:intergenic | 25.0% |
| !! | TAACCAAGTTTGGAATAAAT+TGG | - | chr4_4:64696808-64696827 | None:intergenic | 25.0% |
| TATATGATTGAAGTGCAAAG+AGG | - | chr4_4:64693498-64693517 | None:intergenic | 30.0% | |
| !! | GAATCTGTGATATTTGTTGT+AGG | + | chr4_4:64693697-64693716 | Msa0695240:intron | 30.0% |
| CATGTCATGATCTCTTTAAT+TGG | - | chr4_4:64693777-64693796 | None:intergenic | 30.0% | |
| CAATTAAAGAGATCATGACA+TGG | + | chr4_4:64693775-64693794 | Msa0695240:exon | 30.0% | |
| ATAACATCTACTGTTATTCC+TGG | + | chr4_4:64693837-64693856 | Msa0695240:CDS | 30.0% | |
| TAACATTGAATTCCAAGATC+AGG | + | chr4_4:64693944-64693963 | Msa0695240:CDS | 30.0% | |
| TTATCAGTAGAAATCGAACT+CGG | + | chr4_4:64694032-64694051 | Msa0695240:intron | 30.0% | |
| TTGTGTGTGAATGATTGAAT+AGG | + | chr4_4:64694142-64694161 | Msa0695240:intron | 30.0% | |
| TGTGTGTGAATGATTGAATA+GGG | + | chr4_4:64694143-64694162 | Msa0695240:intron | 30.0% | |
| ! | TGAAGTATCTCTTGATCATT+CGG | - | chr4_4:64694215-64694234 | None:intergenic | 30.0% |
| TCAATAAGAGGATGAAGTTT+GGG | - | chr4_4:64694269-64694288 | None:intergenic | 30.0% | |
| ATCAATAAGAGGATGAAGTT+TGG | - | chr4_4:64694270-64694289 | None:intergenic | 30.0% | |
| ! | TTTTATCACTGAGAATGCAA+GGG | - | chr4_4:64694620-64694639 | None:intergenic | 30.0% |
| ! | ATTTTATCACTGAGAATGCA+AGG | - | chr4_4:64694621-64694640 | None:intergenic | 30.0% |
| GCATTCTCAGTGATAAAATT+TGG | + | chr4_4:64694622-64694641 | Msa0695240:intron | 30.0% | |
| CTTAAAAGTTTAACAACTCG+AGG | + | chr4_4:64694884-64694903 | Msa0695240:intron | 30.0% | |
| CTGGTAAAATATCTTATTCC+AGG | - | chr4_4:64694961-64694980 | None:intergenic | 30.0% | |
| GAAGAAATTAAGCAAATGAG+AGG | + | chr4_4:64695084-64695103 | Msa0695240:intron | 30.0% | |
| TGTTTACACAATCTTCTCTT+TGG | - | chr4_4:64695272-64695291 | None:intergenic | 30.0% | |
| TTGTAAGGATCATCAAGAAA+AGG | - | chr4_4:64695355-64695374 | None:intergenic | 30.0% | |
| CCCAATGAAAATAAAGCAAA+AGG | + | chr4_4:64695477-64695496 | Msa0695240:intron | 30.0% | |
| !! | ATTGACATAAATGGCTTGTT+GGG | - | chr4_4:64695675-64695694 | None:intergenic | 30.0% |
| ! | AATCTCTTTTCCGTATGTTT+TGG | + | chr4_4:64695739-64695758 | Msa0695240:intron | 30.0% |
| ! | ATCTCTTTTCCGTATGTTTT+GGG | + | chr4_4:64695740-64695759 | Msa0695240:intron | 30.0% |
| ! | TTTTCTTTTTGGATTCGGAT+CGG | - | chr4_4:64695817-64695836 | None:intergenic | 30.0% |
| ATAGAGATAAAACACAGACT+CGG | + | chr4_4:64695850-64695869 | Msa0695240:intron | 30.0% | |
| !!! | CCCTTTTAATATTTTGGAAC+GGG | - | chr4_4:64695897-64695916 | None:intergenic | 30.0% |
| CCCGTTCCAAAATATTAAAA+GGG | + | chr4_4:64695894-64695913 | Msa0695240:intron | 30.0% | |
| !! | GCCCTTTTAATATTTTGGAA+CGG | - | chr4_4:64695898-64695917 | None:intergenic | 30.0% |
| ! | CGTATGCCCTTTTAATATTT+TGG | - | chr4_4:64695903-64695922 | None:intergenic | 30.0% |
| !!! | AACTTGTTTTGGGATCATTT+TGG | + | chr4_4:64696111-64696130 | Msa0695240:intron | 30.0% |
| !! | AGTCTTTTGTTATAACATGC+AGG | + | chr4_4:64696284-64696303 | Msa0695240:intron | 30.0% |
| TAAAAAAAGATGGACAGATC+CGG | + | chr4_4:64696309-64696328 | Msa0695240:CDS | 30.0% | |
| ! | ACAAGACCAGTTTTTATTGA+TGG | + | chr4_4:64696440-64696459 | Msa0695240:CDS | 30.0% |
| ! | TGCAGTATCCTTGATAATAT+TGG | - | chr4_4:64696654-64696673 | None:intergenic | 30.0% |
| GATACTGCAAGTTATGAAAA+TGG | + | chr4_4:64696665-64696684 | Msa0695240:CDS | 30.0% | |
| !! | AATGGACTGATGATAAATCA+AGG | + | chr4_4:64696683-64696702 | Msa0695240:CDS | 30.0% |
| TGAGAATTGTAGTAATCCAT+AGG | - | chr4_4:64696737-64696756 | None:intergenic | 30.0% | |
| ATCCCAATTTATTCCAAACT+TGG | + | chr4_4:64696802-64696821 | Msa0695240:CDS | 30.0% | |
| TAGCTATGTGAAAAACTTCT+TGG | + | chr4_4:64696896-64696915 | Msa0695240:exon | 30.0% | |
| TATAGCTACATAGATGTTGA+TGG | + | chr4_4:64696946-64696965 | Msa0695240:three_prime_UTR | 30.0% | |
| TTCCATTCTCTTCCTATAAG+AGG | + | chr4_4:64693537-64693556 | Msa0695240:five_prime_UTR | 35.0% | |
| TTCCTATAAGAGGTGATTCA+GGG | + | chr4_4:64693547-64693566 | Msa0695240:intron | 35.0% | |
| ATGACTCAGATGATCAAGAT+AGG | + | chr4_4:64693802-64693821 | Msa0695240:CDS | 35.0% | |
| TGACTCAGATGATCAAGATA+GGG | + | chr4_4:64693803-64693822 | Msa0695240:CDS | 35.0% | |
| TCAATGTTATGACCACATGA+GGG | - | chr4_4:64693933-64693952 | None:intergenic | 35.0% | |
| TTCAATGTTATGACCACATG+AGG | - | chr4_4:64693934-64693953 | None:intergenic | 35.0% | |
| AAGTTTGCATCGTAAGTGAT+TGG | - | chr4_4:64694095-64694114 | None:intergenic | 35.0% | |
| TCAAGAGATACTTCAGCATT+TGG | + | chr4_4:64694220-64694239 | Msa0695240:CDS | 35.0% | |
| GGTATGAACTCATCAATAAG+AGG | - | chr4_4:64694281-64694300 | None:intergenic | 35.0% | |
| TTTATCACTGAGAATGCAAG+GGG | - | chr4_4:64694619-64694638 | None:intergenic | 35.0% | |
| AAAGTTTAACAACTCGAGGT+TGG | + | chr4_4:64694888-64694907 | Msa0695240:intron | 35.0% | |
| AAGTTTAACAACTCGAGGTT+GGG | + | chr4_4:64694889-64694908 | Msa0695240:intron | 35.0% | |
| GAAGGAGACAAAAATGAGAA+AGG | + | chr4_4:64695499-64695518 | Msa0695240:intron | 35.0% | |
| ! | TAATTGCATCTCCAGGATTT+TGG | - | chr4_4:64695621-64695640 | None:intergenic | 35.0% |
| !! | TTGACATAAATGGCTTGTTG+GGG | - | chr4_4:64695674-64695693 | None:intergenic | 35.0% |
| ! | GATTGACATAAATGGCTTGT+TGG | - | chr4_4:64695676-64695695 | None:intergenic | 35.0% |
| TAGAGATAAAACACAGACTC+GGG | + | chr4_4:64695851-64695870 | Msa0695240:intron | 35.0% | |
| GCCCGTTCCAAAATATTAAA+AGG | + | chr4_4:64695893-64695912 | Msa0695240:intron | 35.0% | |
| TGAGTGTACAAAAAGTGAGT+TGG | - | chr4_4:64696263-64696282 | None:intergenic | 35.0% | |
| CATGCAGGTGTAAAAAAAGA+TGG | + | chr4_4:64696299-64696318 | Msa0695240:intron | 35.0% | |
| AGGAACAAGGAAAAGAAGAA+AGG | + | chr4_4:64696367-64696386 | Msa0695240:CDS | 35.0% | |
| AAGGTTCAAACTGATGAAGA+AGG | + | chr4_4:64696386-64696405 | Msa0695240:CDS | 35.0% | |
| AGTAATGAAGAGGAGAAAGA+TGG | + | chr4_4:64696566-64696585 | Msa0695240:CDS | 35.0% | |
| ! | TGGCGAATTAGTTGTTTCAA+AGG | + | chr4_4:64696586-64696605 | Msa0695240:CDS | 35.0% |
| GAATTGTAGTAATCCATAGG+AGG | - | chr4_4:64696734-64696753 | None:intergenic | 35.0% | |
| TGACCATGTTGGTCATAATT+TGG | + | chr4_4:64696769-64696788 | Msa0695240:CDS | 35.0% | |
| GACCATGTTGGTCATAATTT+GGG | + | chr4_4:64696770-64696789 | Msa0695240:CDS | 35.0% | |
| TTCCCAAATTATGACCAACA+TGG | - | chr4_4:64696775-64696794 | None:intergenic | 35.0% | |
| ATTCCAAACTTGGTTATGCA+AGG | + | chr4_4:64696812-64696831 | Msa0695240:CDS | 35.0% | |
| TTCCTTTATTCGATTGGCAA+TGG | + | chr4_4:64696844-64696863 | Msa0695240:CDS | 35.0% | |
| ATCCATTGCCAATCGAATAA+AGG | - | chr4_4:64696849-64696868 | None:intergenic | 35.0% | |
| AAGAGAAGGAATGAGGCAAA+GGG | - | chr4_4:64693429-64693448 | None:intergenic | 40.0% | |
| CACCTCTTATAGGAAGAGAA+TGG | - | chr4_4:64693542-64693561 | None:intergenic | 40.0% | |
| CTTCCTATAAGAGGTGATTC+AGG | + | chr4_4:64693546-64693565 | Msa0695240:intron | 40.0% | |
| TTCCCTGAATCACCTCTTAT+AGG | - | chr4_4:64693552-64693571 | None:intergenic | 40.0% | |
| !! | CTGTGATATTTGTTGTAGGG+TGG | + | chr4_4:64693701-64693720 | Msa0695240:intron | 40.0% |
| !! | ATATTTGTTGTAGGGTGGTG+TGG | + | chr4_4:64693706-64693725 | Msa0695240:intron | 40.0% |
| GACTCAGATGATCAAGATAG+GGG | + | chr4_4:64693804-64693823 | Msa0695240:CDS | 40.0% | |
| GTACTTTCATTGCTAGTTCC+AGG | - | chr4_4:64693858-64693877 | None:intergenic | 40.0% | |
| CAATGTTATGACCACATGAG+GGG | - | chr4_4:64693932-64693951 | None:intergenic | 40.0% | |
| AAATCGAACTCGGTATTCTC+TGG | + | chr4_4:64694042-64694061 | Msa0695240:intron | 40.0% | |
| GTGTGAATGATTGAATAGGG+TGG | + | chr4_4:64694146-64694165 | Msa0695240:intron | 40.0% | |
| ACTTCAGCATTTGGAAGCAA+AGG | + | chr4_4:64694229-64694248 | Msa0695240:CDS | 40.0% | |
| GAGTTCATACCAACACTTGA+AGG | + | chr4_4:64694290-64694309 | Msa0695240:CDS | 40.0% | |
| ! | TTAAGACCTGGTAGCTTTTC+TGG | - | chr4_4:64694341-64694360 | None:intergenic | 40.0% |
| AGTTTAACAACTCGAGGTTG+GGG | + | chr4_4:64694890-64694909 | Msa0695240:intron | 40.0% | |
| CTAGACGTTATTCCTTTGAC+TGG | - | chr4_4:64694980-64694999 | None:intergenic | 40.0% | |
| CAGTCAAAGGAATAACGTCT+AGG | + | chr4_4:64694978-64694997 | Msa0695240:intron | 40.0% | |
| GAAAGACCAAACCAAAATCC+TGG | + | chr4_4:64695607-64695626 | Msa0695240:intron | 40.0% | |
| !! | TGGTGTTACAAAACCTGATC+CGG | + | chr4_4:64695766-64695785 | Msa0695240:intron | 40.0% |
| ! | ACGACGCTTAACTTTTGGAT+TGG | + | chr4_4:64695789-64695808 | Msa0695240:intron | 40.0% |
| ! | CGACGCTTAACTTTTGGATT+GGG | + | chr4_4:64695790-64695809 | Msa0695240:intron | 40.0% |
| !!! | TTAATATTTTGGAACGGGCC+AGG | - | chr4_4:64695892-64695911 | None:intergenic | 40.0% |
| AATGTTATTAGGGCCAAGTG+AGG | + | chr4_4:64696230-64696249 | Msa0695240:intron | 40.0% | |
| ATGTTATTAGGGCCAAGTGA+GGG | + | chr4_4:64696231-64696250 | Msa0695240:intron | 40.0% | |
| ! | CCTGTTGTGTATGCTTTAGA+TGG | - | chr4_4:64696350-64696369 | None:intergenic | 40.0% |
| ! | CCATCTAAAGCATACACAAC+AGG | + | chr4_4:64696347-64696366 | Msa0695240:CDS | 40.0% |
| AAGCATACACAACAGGAACA+AGG | + | chr4_4:64696354-64696373 | Msa0695240:CDS | 40.0% | |
| AAGAAGGAAGTGAGACAAGA+TGG | + | chr4_4:64696402-64696421 | Msa0695240:CDS | 40.0% | |
| AGACAAGATGGCACAAAACA+GGG | + | chr4_4:64696414-64696433 | Msa0695240:CDS | 40.0% | |
| ! | CTTCTTTTGCCTTCCATAGT+TGG | - | chr4_4:64696504-64696523 | None:intergenic | 40.0% |
| ! | GTATTGATGCATCACCCAAT+TGG | - | chr4_4:64696537-64696556 | None:intergenic | 40.0% |
| TCTCCTCTTCATTACTACCA+AGG | - | chr4_4:64696562-64696581 | None:intergenic | 40.0% | |
| TTATTTCCACCACATTGTCG+AGG | - | chr4_4:64696629-64696648 | None:intergenic | 40.0% | |
| GAGGAGCTTCATTATCATCT+TGG | - | chr4_4:64696715-64696734 | None:intergenic | 40.0% | |
| ! | TGATAATGAAGCTCCTCCTA+TGG | + | chr4_4:64696718-64696737 | Msa0695240:CDS | 40.0% |
| TCACCTTGCATAACCAAGTT+TGG | - | chr4_4:64696818-64696837 | None:intergenic | 40.0% | |
| AACTTGGTTATGCAAGGTGA+TGG | + | chr4_4:64696818-64696837 | Msa0695240:CDS | 40.0% | |
| TGGCTCTTCCTTTATTCGAT+TGG | + | chr4_4:64696838-64696857 | Msa0695240:CDS | 40.0% | |
| CAATGGATGCAAACAAAGCT+GGG | + | chr4_4:64696861-64696880 | Msa0695240:CDS | 40.0% | |
| GAAGAGAAGGAATGAGGCAA+AGG | - | chr4_4:64693430-64693449 | None:intergenic | 45.0% | |
| GAGAGAGAAGAGAAGGAATG+AGG | - | chr4_4:64693436-64693455 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAAGAGA+AGG | - | chr4_4:64693443-64693462 | None:intergenic | 45.0% | |
| GCAAGTTAGGGTTCGAACTT+CGG | - | chr4_4:64693910-64693929 | None:intergenic | 45.0% | |
| CCAACACTTGAAGGAGAGAA+CGG | + | chr4_4:64694299-64694318 | Msa0695240:CDS | 45.0% | |
| ACACATCCAGAAAAGCTACC+AGG | + | chr4_4:64694332-64694351 | Msa0695240:CDS | 45.0% | |
| GTTTAACAACTCGAGGTTGG+GGG | + | chr4_4:64694891-64694910 | Msa0695240:intron | 45.0% | |
| TGCATGCAAACTTGTCGAGT+TGG | - | chr4_4:64695131-64695150 | None:intergenic | 45.0% | |
| !!! | GCATCTCCAGGATTTTGGTT+TGG | - | chr4_4:64695616-64695635 | None:intergenic | 45.0% |
| !! | TTTCCGTATGTTTTGGGCAG+TGG | + | chr4_4:64695746-64695765 | Msa0695240:intron | 45.0% |
| ACACCACTGCCCAAAACATA+CGG | - | chr4_4:64695752-64695771 | None:intergenic | 45.0% | |
| ! | TCCAAAAGTTAAGCGTCGTC+CGG | - | chr4_4:64695788-64695807 | None:intergenic | 45.0% |
| GAGACAAGATGGCACAAAAC+AGG | + | chr4_4:64696413-64696432 | Msa0695240:CDS | 45.0% | |
| CTAGTCCTCTACACCAACTA+TGG | + | chr4_4:64696488-64696507 | Msa0695240:CDS | 45.0% | |
| TCCTCTACACCAACTATGGA+AGG | + | chr4_4:64696492-64696511 | Msa0695240:CDS | 45.0% | |
| AGAAGCCTGAGAAGACCAAT+TGG | + | chr4_4:64696519-64696538 | Msa0695240:CDS | 45.0% | |
| GAAGCCTGAGAAGACCAATT+GGG | + | chr4_4:64696520-64696539 | Msa0695240:CDS | 45.0% | |
| !! | ATCACCCAATTGGTCTTCTC+AGG | - | chr4_4:64696527-64696546 | None:intergenic | 45.0% |
| GTGATGCATCAATACCACCT+TGG | + | chr4_4:64696542-64696561 | Msa0695240:CDS | 45.0% | |
| CCTCTTCATTACTACCAAGG+TGG | - | chr4_4:64696559-64696578 | None:intergenic | 45.0% | |
| ! | CCACCTTGGTAGTAATGAAG+AGG | + | chr4_4:64696556-64696575 | Msa0695240:CDS | 45.0% |
| GCAATGGATGCAAACAAAGC+TGG | + | chr4_4:64696860-64696879 | Msa0695240:CDS | 45.0% | |
| !! | AATATATAACAAAATAAAAA+AGG | - | chr4_4:64693631-64693650 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTATAAAAACT+AGG | + | chr4_4:64694388-64694407 | Msa0695240:intron | 5.0% |
| !!! | TTTTTTTTTTATAAAAACTA+GGG | + | chr4_4:64694389-64694408 | Msa0695240:intron | 5.0% |
| AGGAATGAGGCAAAGGGAGA+GGG | - | chr4_4:64693423-64693442 | None:intergenic | 50.0% | |
| AAGGAATGAGGCAAAGGGAG+AGG | - | chr4_4:64693424-64693443 | None:intergenic | 50.0% | |
| GTTAGGGTTCGAACTTCGGT+TGG | - | chr4_4:64693906-64693925 | None:intergenic | 50.0% | |
| ACCACATGAGGGGCAAGTTA+GGG | - | chr4_4:64693922-64693941 | None:intergenic | 50.0% | |
| GGGTGGAATCAATGAACTGC+CGG | + | chr4_4:64694163-64694182 | Msa0695240:intron | 50.0% | |
| GGTGGAATCAATGAACTGCC+GGG | + | chr4_4:64694164-64694183 | Msa0695240:CDS | 50.0% | |
| CAATGAACTGCCGGGTTTAC+CGG | + | chr4_4:64694172-64694191 | Msa0695240:CDS | 50.0% | |
| GGATCAAACTTCACTCCTGC+CGG | - | chr4_4:64694194-64694213 | None:intergenic | 50.0% | |
| CCGTTCTCTCCTTCAAGTGT+TGG | - | chr4_4:64694302-64694321 | None:intergenic | 50.0% | |
| TGAGTGCACCAAACTCAGTG+CGG | + | chr4_4:64695151-64695170 | Msa0695240:intron | 50.0% | |
| ! | TCCGGACGACGCTTAACTTT+TGG | + | chr4_4:64695784-64695803 | Msa0695240:intron | 50.0% |
| CGTACCTCATCGAGTGTGAT+CGG | + | chr4_4:64696166-64696185 | Msa0695240:intron | 50.0% | |
| GTACCTCATCGAGTGTGATC+GGG | + | chr4_4:64696167-64696186 | Msa0695240:intron | 50.0% | |
| AAACCCGATCACACTCGATG+AGG | - | chr4_4:64696173-64696192 | None:intergenic | 50.0% | |
| AGTTGGATGTGTCCCTCACT+TGG | - | chr4_4:64696246-64696265 | None:intergenic | 50.0% | |
| AGATCCGGCACTTCTTTCAC+AGG | + | chr4_4:64696324-64696343 | Msa0695240:CDS | 50.0% | |
| ! | ATGGCCTGTGAAAGAAGTGC+CGG | - | chr4_4:64696331-64696350 | None:intergenic | 50.0% |
| ! | GCCTTCCATAGTTGGTGTAG+AGG | - | chr4_4:64696496-64696515 | None:intergenic | 50.0% |
| GGAATGAGGCAAAGGGAGAG+GGG | - | chr4_4:64693422-64693441 | None:intergenic | 55.0% | |
| ! | ACCCTAACTTGCCCCTCATG+TGG | + | chr4_4:64693918-64693937 | Msa0695240:CDS | 55.0% |
| GACCACATGAGGGGCAAGTT+AGG | - | chr4_4:64693923-64693942 | None:intergenic | 55.0% | |
| TTCACTCCTGCCGGTAAACC+CGG | - | chr4_4:64694185-64694204 | None:intergenic | 55.0% | |
| AACAACTCGAGGTTGGGGGT+TGG | + | chr4_4:64694895-64694914 | Msa0695240:intron | 55.0% | |
| CAATGCCACCGCACTGAGTT+TGG | - | chr4_4:64695162-64695181 | None:intergenic | 55.0% | |
| ! | AGTTAAGCGTCGTCCGGATC+AGG | - | chr4_4:64695782-64695801 | None:intergenic | 55.0% |
| CACAGACTCGGGTTAACCCT+CGG | + | chr4_4:64695862-64695881 | Msa0695240:intron | 55.0% | |
| ACAGACTCGGGTTAACCCTC+GGG | + | chr4_4:64695863-64695882 | Msa0695240:intron | 55.0% | |
| CACATTGTCGAGGCTGTGTC+TGG | - | chr4_4:64696619-64696638 | None:intergenic | 55.0% | |
| CAGACACAGCCTCGACAATG+TGG | + | chr4_4:64696617-64696636 | Msa0695240:CDS | 55.0% | |
| ACACAGCCTCGACAATGTGG+TGG | + | chr4_4:64696620-64696639 | Msa0695240:CDS | 55.0% | |
| GTGCACCAAACTCAGTGCGG+TGG | + | chr4_4:64695154-64695173 | Msa0695240:intron | 60.0% | |
| GGGTTAACCCTCGGGTTACC+TGG | + | chr4_4:64695871-64695890 | Msa0695240:intron | 60.0% | |
| GAACTGCCGGGTTTACCGGC+AGG | + | chr4_4:64694176-64694195 | Msa0695240:CDS | 65.0% | |
| GAACGGGCCAGGTAACCCGA+GGG | - | chr4_4:64695881-64695900 | None:intergenic | 65.0% | |
| GGAACGGGCCAGGTAACCCG+AGG | - | chr4_4:64695882-64695901 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 64693382 | 64697117 | 64693382 | ID=Msa0695240;Name=Msa0695240 |
| chr4_4 | mRNA | 64693382 | 64697117 | 64693382 | ID=Msa0695240-mRNA-1;Parent=Msa0695240;Name=Msa0695240-mRNA-1;_AED=0.03;_eAED=0.03;_QI=247|1|1|1|0.66|0.5|4|219|319 |
| chr4_4 | exon | 64693382 | 64693558 | 64693382 | ID=Msa0695240-mRNA-1:exon:18581;Parent=Msa0695240-mRNA-1 |
| chr4_4 | exon | 64693719 | 64693965 | 64693719 | ID=Msa0695240-mRNA-1:exon:18582;Parent=Msa0695240-mRNA-1 |
| chr4_4 | exon | 64694164 | 64694353 | 64694164 | ID=Msa0695240-mRNA-1:exon:18583;Parent=Msa0695240-mRNA-1 |
| chr4_4 | exon | 64696306 | 64697117 | 64696306 | ID=Msa0695240-mRNA-1:exon:18584;Parent=Msa0695240-mRNA-1 |
| chr4_4 | five_prime_UTR | 64693382 | 64693558 | 64693382 | ID=Msa0695240-mRNA-1:five_prime_utr;Parent=Msa0695240-mRNA-1 |
| chr4_4 | five_prime_UTR | 64693719 | 64693788 | 64693719 | ID=Msa0695240-mRNA-1:five_prime_utr;Parent=Msa0695240-mRNA-1 |
| chr4_4 | CDS | 64693789 | 64693965 | 64693789 | ID=Msa0695240-mRNA-1:cds;Parent=Msa0695240-mRNA-1 |
| chr4_4 | CDS | 64694164 | 64694353 | 64694164 | ID=Msa0695240-mRNA-1:cds;Parent=Msa0695240-mRNA-1 |
| chr4_4 | CDS | 64696306 | 64696898 | 64696306 | ID=Msa0695240-mRNA-1:cds;Parent=Msa0695240-mRNA-1 |
| chr4_4 | three_prime_UTR | 64696899 | 64697117 | 64696899 | ID=Msa0695240-mRNA-1:three_prime_utr;Parent=Msa0695240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
