AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0695990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0695990 MtrunA17_Chr4g0047841 91.092 348 22 4 1 343 1 344 0.0 593
Msa0695990 MtrunA17_Chr2g0318101 47.745 377 137 12 1 342 1 352 5.67e-99 296
Msa0695990 MtrunA17_Chr7g0252971 54.497 189 57 3 10 187 3 173 2.09e-65 210
Msa0695990 MtrunA17_Chr7g0263931 46.531 245 102 6 14 251 10 232 2.75e-63 204
Msa0695990 MtrunA17_Chr5g0417791 53.977 176 57 3 14 185 2 157 5.64e-61 196
Msa0695990 MtrunA17_Chr2g0326361 55.249 181 49 4 15 186 14 171 6.79e-61 197
Msa0695990 MtrunA17_Chr4g0042561 54.286 175 56 3 15 185 9 163 1.70e-59 192
Msa0695990 MtrunA17_Chr3g0124761 57.865 178 47 4 14 186 6 160 4.16e-59 192
Msa0695990 MtrunA17_Chr2g0318081 57.143 182 50 5 15 192 16 173 1.17e-57 190
Msa0695990 MtrunA17_Chr8g0359921 57.143 182 52 5 15 192 14 173 2.80e-56 186
Msa0695990 MtrunA17_Chr8g0384721 52.709 203 66 8 15 209 7 187 4.05e-56 184
Msa0695990 MtrunA17_Chr3g0130731 51.852 189 57 5 14 191 6 171 2.00e-52 175
Msa0695990 MtrunA17_Chr5g0417001 38.983 236 119 5 15 241 14 233 5.55e-50 171
Msa0695990 MtrunA17_Chr6g0453131 47.849 186 75 5 15 194 15 184 3.52e-49 169
Msa0695990 MtrunA17_Chr8g0361731 45.143 175 79 2 17 187 16 177 1.05e-48 168
Msa0695990 MtrunA17_Chr2g0316971 44.505 182 67 3 14 186 22 178 7.35e-44 155
Msa0695990 MtrunA17_Chr7g0214071 46.328 177 64 4 14 186 14 163 3.45e-42 147
Msa0695990 MtrunA17_Chr6g0484441 43.011 186 66 5 15 191 5 159 9.51e-42 148
Msa0695990 MtrunA17_Chr4g0060931 41.989 181 69 4 15 186 17 170 8.80e-41 146
Msa0695990 MtrunA17_Chr2g0309891 43.182 176 71 6 15 184 6 158 3.33e-40 144
Msa0695990 MtrunA17_Chr3g0091921 43.094 181 67 4 15 186 16 169 7.70e-40 142
Msa0695990 MtrunA17_Chr3g0139331 42.077 183 64 4 15 186 11 162 8.36e-40 143
Msa0695990 MtrunA17_Chr5g0398971 38.991 218 93 8 14 220 6 194 8.55e-40 143
Msa0695990 MtrunA17_Chr4g0018391 38.693 199 86 6 14 202 6 178 1.42e-38 140
Msa0695990 MtrunA17_Chr1g0147421 41.758 182 63 5 15 184 27 177 2.38e-38 140
Msa0695990 MtrunA17_Chr6g0453451 41.209 182 71 5 14 186 19 173 2.63e-38 139
Msa0695990 MtrunA17_Chr5g0442771 41.379 174 80 4 17 183 20 178 3.85e-38 138
Msa0695990 MtrunA17_Chr6g0461661 41.714 175 78 3 15 185 18 172 6.86e-38 139
Msa0695990 MtrunA17_Chr4g0076731 40.212 189 81 5 12 193 51 214 7.85e-38 140
Msa0695990 MtrunA17_Chr5g0405211 38.462 195 80 6 1 188 1 162 1.09e-37 138
Msa0695990 MtrunA17_Chr8g0385991 44.068 177 76 6 14 186 13 170 1.99e-37 134
Msa0695990 MtrunA17_Chr3g0109821 39.810 211 91 7 15 219 6 186 3.39e-37 141
Msa0695990 MtrunA17_Chr2g0309331 37.989 179 79 4 15 186 10 163 3.43e-37 136
Msa0695990 MtrunA17_Chr5g0433781 41.753 194 80 6 15 202 6 172 1.94e-36 139
Msa0695990 MtrunA17_Chr2g0311651 42.021 188 87 6 17 193 24 200 2.32e-36 133
Msa0695990 MtrunA17_Chr1g0200561 37.949 195 83 6 3 190 12 175 2.79e-36 134
Msa0695990 MtrunA17_Chr4g0056541 37.824 193 83 5 14 199 6 168 3.59e-36 134
Msa0695990 MtrunA17_Chr1g0183741 38.068 176 79 3 15 186 10 159 3.82e-36 132
Msa0695990 MtrunA17_Chr2g0311661 41.081 185 91 5 17 194 23 196 5.01e-36 132
Msa0695990 MtrunA17_Chr7g0253011 41.270 189 73 7 15 191 17 179 5.11e-36 134
Msa0695990 MtrunA17_Chr8g0372121 39.106 179 76 5 15 186 6 158 5.56e-36 132
Msa0695990 MtrunA17_Chr7g0261411 39.766 171 73 3 15 181 10 154 7.07e-36 131
Msa0695990 MtrunA17_Chr6g0481091 40.000 175 75 4 15 183 6 156 1.10e-35 129
Msa0695990 MtrunA17_Chr4g0017921 36.893 206 96 5 15 213 8 186 3.54e-35 131
Msa0695990 MtrunA17_Chr5g0400461 44.521 146 70 3 15 149 6 151 1.52e-34 129
Msa0695990 MtrunA17_Chr8g0346001 36.364 187 97 6 6 185 6 177 1.94e-34 130
Msa0695990 MtrunA17_Chr2g0312321 36.842 190 91 4 15 200 11 175 8.43e-34 126
Msa0695990 MtrunA17_Chr3g0131911 42.135 178 79 5 15 186 14 173 1.63e-33 124
Msa0695990 MtrunA17_Chr4g0050701 38.462 169 84 2 15 183 11 159 1.74e-33 122
Msa0695990 MtrunA17_Chr7g0217721 38.953 172 92 3 18 185 22 184 6.54e-33 125
Msa0695990 MtrunA17_Chr4g0054791 45.324 139 69 3 15 146 6 144 1.18e-32 124
Msa0695990 MtrunA17_Chr3g0144271 47.761 134 55 3 15 138 23 151 1.88e-32 125
Msa0695990 MtrunA17_Chr1g0197351 39.548 177 83 4 15 185 42 200 2.41e-32 125
Msa0695990 MtrunA17_Chr4g0038751 37.696 191 78 6 5 186 6 164 1.36e-31 120
Msa0695990 MtrunA17_Chr7g0217711 43.796 137 69 3 17 147 21 155 4.37e-30 113
Msa0695990 MtrunA17_Chr3g0130101 37.143 175 80 5 15 183 7 157 6.67e-30 117
Msa0695990 MtrunA17_Chr1g0201021 44.275 131 65 3 17 141 21 149 1.69e-28 115
Msa0695990 MtrunA17_Chr5g0428991 38.547 179 80 5 15 187 25 179 2.70e-28 115
Msa0695990 MtrunA17_Chr1g0197361 37.288 177 79 5 17 186 10 161 3.68e-28 115
Msa0695990 MtrunA17_Chr3g0092671 38.764 178 75 6 17 186 7 158 3.78e-28 114
Msa0695990 MtrunA17_Chr8g0364791 42.424 132 68 3 13 138 4 133 1.98e-27 111
Msa0695990 MtrunA17_Chr8g0384201 42.424 132 68 3 13 138 4 133 3.91e-27 111
Msa0695990 MtrunA17_Chr3g0128151 37.222 180 83 5 15 188 22 177 5.29e-27 111
Msa0695990 MtrunA17_Chr8g0345671 43.750 144 60 6 11 140 6 142 1.13e-26 108
Msa0695990 MtrunA17_Chr3g0128111 35.227 176 84 5 18 187 45 196 9.61e-26 103
Msa0695990 MtrunA17_Chr8g0345711 38.028 142 80 4 12 146 9 149 9.16e-25 99.0
Msa0695990 MtrunA17_Chr8g0345691 41.538 130 68 4 14 136 11 139 9.23e-25 103
Msa0695990 MtrunA17_Chr4g0026141 35.577 208 99 8 15 209 5 190 1.12e-24 100
Msa0695990 MtrunA17_Chr2g0321631 33.188 229 112 10 16 225 5 211 1.29e-21 92.4
Msa0695990 MtrunA17_Chr7g0266701 32.597 181 94 6 15 185 4 166 1.38e-21 92.4
Msa0695990 MtrunA17_Chr8g0384351 37.870 169 65 6 15 183 10 138 2.28e-21 90.1
Msa0695990 MtrunA17_Chr8g0345731 39.850 133 67 5 15 136 24 154 9.58e-21 88.2
Msa0695990 MtrunA17_Chr3g0130321 35.227 176 84 9 15 182 7 160 1.51e-19 85.5
Msa0695990 MtrunA17_Chr8g0345701 38.194 144 63 6 15 136 7 146 1.71e-19 84.7
Msa0695990 MtrunA17_Chr2g0321741 39.796 98 52 3 44 136 21 116 9.93e-18 83.2
Msa0695990 MtrunA17_Chr3g0113001 38.281 128 54 5 64 187 14 120 1.38e-17 82.0
Msa0695990 MtrunA17_Chr7g0251661 33.600 125 79 3 15 136 10 133 1.97e-16 75.9
Msa0695990 MtrunA17_Chr7g0251671 33.582 134 85 3 13 143 8 140 4.26e-16 75.1
Msa0695990 MtrunA17_Chr8g0345741 35.593 118 68 4 26 136 2 118 4.34e-16 74.7
Msa0695990 MtrunA17_Chr7g0251651 33.083 133 85 3 15 144 18 149 7.65e-15 72.4
Msa0695990 MtrunA17_Chr7g0243371 43.590 78 34 2 68 138 17 91 1.19e-11 61.2
Msa0695990 MtrunA17_Chr1g0194791 61.702 47 15 2 17 61 48 93 1.19e-11 60.8
Msa0695990 MtrunA17_Chr3g0113031 35.417 96 34 3 94 185 23 94 1.44e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0695990 AT1G61110.1 50.693 361 121 14 1 343 1 322 1.77e-93 281
Msa0695990 AT3G15510.1 46.907 388 133 14 1 342 1 361 8.20e-84 258
Msa0695990 AT3G04070.1 55.319 188 76 3 8 187 3 190 2.83e-65 210
Msa0695990 AT1G52880.1 64.773 176 42 3 19 188 21 182 2.39e-63 204
Msa0695990 AT1G69490.1 54.749 179 57 4 15 189 9 167 7.71e-62 199
Msa0695990 AT3G04070.2 52.941 187 66 3 8 187 3 174 1.44e-61 200
Msa0695990 AT1G01720.1 56.742 178 52 4 14 187 6 162 5.40e-58 189
Msa0695990 AT4G27410.2 57.062 177 48 5 15 187 14 166 5.53e-58 189
Msa0695990 AT5G08790.1 50.685 219 80 6 14 227 6 201 1.55e-57 188
Msa0695990 AT1G52890.1 51.961 204 59 6 15 214 14 182 3.18e-57 188
Msa0695990 AT3G15500.1 52.239 201 57 5 15 211 14 179 4.83e-57 188
Msa0695990 AT1G77450.1 57.143 175 47 5 14 183 9 160 1.43e-56 184
Msa0695990 AT5G63790.2 49.309 217 76 6 14 225 59 246 4.27e-56 186
Msa0695990 AT5G63790.1 49.309 217 76 6 14 225 49 236 5.10e-56 185
Msa0695990 AT4G27410.3 52.062 194 48 6 15 187 14 183 1.17e-53 179
Msa0695990 AT5G39820.1 48.370 184 84 4 17 193 22 201 1.38e-52 177
Msa0695990 AT1G26870.1 46.369 179 79 3 15 189 16 181 1.05e-48 169
Msa0695990 AT5G39610.1 43.005 193 73 5 12 194 17 182 5.95e-44 153
Msa0695990 AT5G53950.1 43.646 181 68 3 14 185 16 171 1.57e-43 154
Msa0695990 AT5G18270.2 40.580 207 88 4 15 212 21 201 4.03e-43 152
Msa0695990 AT3G18400.1 43.716 183 64 5 14 187 4 156 2.80e-42 149
Msa0695990 AT5G18270.1 39.614 207 90 4 15 212 21 201 2.89e-42 150
Msa0695990 AT5G13180.1 48.023 177 62 5 14 186 13 163 4.60e-42 147
Msa0695990 AT5G61430.1 43.575 179 65 4 15 184 16 167 2.60e-41 147
Msa0695990 AT2G24430.2 42.857 182 67 4 15 187 16 169 3.57e-41 146
Msa0695990 AT2G24430.1 42.857 182 67 4 15 187 16 169 3.57e-41 146
Msa0695990 AT3G15170.1 41.667 180 71 3 15 185 20 174 5.46e-41 146
Msa0695990 AT1G76420.1 41.899 179 67 4 15 184 22 172 6.06e-41 146
Msa0695990 AT5G07680.2 43.575 179 65 4 15 184 3 154 9.87e-41 145
Msa0695990 AT5G07680.1 43.575 179 65 4 15 184 17 168 1.09e-40 145
Msa0695990 AT3G29035.1 49.660 147 58 3 15 152 24 163 1.89e-40 144
Msa0695990 AT3G04060.1 42.135 178 78 3 15 188 20 176 4.02e-40 144
Msa0695990 AT3G03200.1 41.530 183 78 5 15 191 6 165 2.30e-39 145
Msa0695990 AT4G36160.1 40.526 190 75 7 1 183 1 159 3.27e-38 140
Msa0695990 AT4G36160.3 40.526 190 75 7 1 183 1 159 3.27e-38 140
Msa0695990 AT4G36160.2 40.526 190 75 7 1 183 5 163 4.71e-38 140
Msa0695990 AT2G33480.2 44.262 183 63 7 14 188 14 165 5.94e-38 137
Msa0695990 AT1G79580.3 39.888 178 74 4 15 185 17 168 6.20e-38 139
Msa0695990 AT1G79580.5 39.888 178 74 4 15 185 17 168 6.20e-38 139
Msa0695990 AT1G79580.4 39.888 178 74 4 15 185 17 168 6.20e-38 139
Msa0695990 AT1G79580.2 39.888 178 74 4 15 185 17 168 6.20e-38 139
Msa0695990 AT1G79580.1 39.888 178 74 4 15 185 17 168 6.20e-38 139
Msa0695990 AT1G12260.2 41.243 177 71 5 14 183 6 156 8.23e-38 138
Msa0695990 AT1G12260.1 41.243 177 71 5 14 183 6 156 1.28e-37 139
Msa0695990 AT2G02450.1 50.000 126 58 2 17 138 53 177 1.35e-37 139
Msa0695990 AT2G02450.2 50.000 126 58 2 17 138 53 177 1.94e-37 139
Msa0695990 AT2G18060.3 39.891 183 73 6 8 183 6 158 2.99e-37 137
Msa0695990 AT2G18060.1 39.891 183 73 6 8 183 6 158 2.99e-37 137
Msa0695990 AT2G33480.1 43.716 183 66 7 14 188 14 167 3.33e-37 135
Msa0695990 AT2G43000.1 40.884 181 80 5 17 193 20 177 4.34e-37 134
Msa0695990 AT5G66300.1 39.320 206 85 8 8 202 9 185 6.17e-37 135
Msa0695990 AT5G62380.2 41.808 177 70 5 14 183 6 156 7.63e-37 136
Msa0695990 AT5G62380.1 41.808 177 70 5 14 183 6 156 7.63e-37 136
Msa0695990 AT5G17260.1 39.691 194 82 7 15 201 6 171 9.84e-37 138
Msa0695990 AT1G71930.2 36.232 207 97 5 15 214 9 187 1.79e-36 134
Msa0695990 AT1G71930.1 36.232 207 97 5 15 214 9 187 1.79e-36 134
Msa0695990 AT1G65910.1 35.683 227 104 7 15 235 6 196 6.74e-36 137
Msa0695990 AT5G46590.2 48.227 141 61 4 7 141 3 137 1.94e-35 130
Msa0695990 AT4G17980.2 41.530 183 76 6 7 183 3 160 2.19e-35 130
Msa0695990 AT5G46590.1 48.227 141 61 4 7 141 3 137 2.48e-35 130
Msa0695990 AT4G17980.1 41.530 183 76 6 7 183 3 160 3.13e-35 129
Msa0695990 AT3G17730.1 39.429 175 76 5 15 183 6 156 3.18e-35 129
Msa0695990 AT4G10350.1 39.888 178 76 5 15 185 9 162 3.95e-35 131
Msa0695990 AT1G62700.1 38.587 184 80 5 15 191 7 164 4.62e-35 132
Msa0695990 AT1G62700.2 38.587 184 80 5 15 191 7 164 4.62e-35 132
Msa0695990 AT1G56010.2 36.649 191 95 5 15 200 19 188 1.05e-34 129
Msa0695990 AT3G12977.1 38.150 173 80 4 15 183 18 167 1.55e-34 128
Msa0695990 AT3G10480.2 39.683 189 84 5 3 185 15 179 2.36e-34 131
Msa0695990 AT5G64530.1 42.775 173 83 4 15 187 3 159 2.73e-34 124
Msa0695990 AT1G33280.1 39.326 178 74 5 15 185 8 158 3.01e-34 128
Msa0695990 AT3G10480.1 39.683 189 85 5 3 185 15 180 3.52e-34 130
Msa0695990 AT1G32770.1 36.517 178 92 4 15 185 16 179 4.29e-34 129
Msa0695990 AT2G46770.1 35.938 192 105 5 1 185 2 182 1.93e-33 127
Msa0695990 AT3G10490.1 38.095 189 88 5 3 185 15 180 2.41e-33 124
Msa0695990 AT3G61910.1 34.259 216 112 7 14 211 10 213 3.25e-33 126
Msa0695990 AT4G28530.1 36.410 195 78 4 15 189 10 178 3.30e-33 126
Msa0695990 AT3G10500.1 39.674 184 69 5 15 186 9 162 5.12e-33 129
Msa0695990 AT1G32510.1 34.434 212 105 5 15 214 6 195 2.00e-32 122
Msa0695990 AT3G12910.1 41.848 184 87 7 17 192 23 194 4.07e-32 122
Msa0695990 AT1G54330.1 40.000 175 72 5 15 183 6 153 4.42e-32 122
Msa0695990 AT3G10490.2 38.095 189 88 5 3 185 15 180 1.10e-31 124
Msa0695990 AT5G04410.1 39.326 178 78 5 15 186 9 162 3.23e-31 124
Msa0695990 AT5G64530.2 48.387 124 56 2 15 138 3 118 3.38e-31 115
Msa0695990 AT1G34180.3 43.750 144 73 3 1 138 2 143 2.36e-30 120
Msa0695990 AT1G33060.2 40.437 183 77 7 15 190 24 181 3.24e-30 121
Msa0695990 AT1G33060.1 40.437 183 77 7 15 190 24 181 3.27e-30 121
Msa0695990 AT1G34180.1 43.750 144 73 3 1 138 2 143 6.59e-30 120
Msa0695990 AT2G17040.1 34.928 209 101 5 17 220 8 186 1.02e-29 115
Msa0695990 AT3G10480.3 33.784 222 85 5 3 185 15 213 3.02e-29 118
Msa0695990 AT2G27300.1 44.094 127 64 3 15 136 14 138 4.66e-29 114
Msa0695990 AT1G34190.1 44.275 131 65 3 17 141 18 146 6.73e-29 117
Msa0695990 AT5G24590.2 46.512 129 62 3 15 137 13 140 7.87e-29 116
Msa0695990 AT1G34180.4 40.385 156 73 3 1 138 2 155 1.16e-28 115
Msa0695990 AT1G34180.2 40.385 156 73 3 1 138 2 155 2.84e-28 115
Msa0695990 AT1G32870.1 42.614 176 75 4 15 186 10 163 1.84e-27 113
Msa0695990 AT1G32870.2 42.614 176 75 4 15 186 10 163 1.96e-27 112
Msa0695990 AT1G32870.3 42.614 176 75 4 15 186 46 199 3.60e-27 112
Msa0695990 AT4G35580.1 45.736 129 62 3 15 137 9 135 4.45e-27 112
Msa0695990 AT3G49530.2 42.105 133 70 3 15 141 13 144 4.80e-27 110
Msa0695990 AT4G35580.3 38.636 176 76 6 15 183 9 159 4.93e-27 112
Msa0695990 AT4G35580.2 38.636 176 76 6 15 183 9 159 5.05e-27 112
Msa0695990 AT5G09330.5 43.511 131 66 3 14 138 5 133 5.55e-27 111
Msa0695990 AT5G09330.2 43.511 131 66 3 14 138 5 133 5.55e-27 111
Msa0695990 AT5G09330.4 43.511 131 66 3 14 138 5 133 5.55e-27 111
Msa0695990 AT5G09330.3 43.511 131 66 3 14 138 5 133 5.55e-27 111
Msa0695990 AT5G09330.1 43.511 131 66 3 14 138 5 133 5.55e-27 111
Msa0695990 AT3G49530.1 42.105 133 70 3 15 141 13 144 6.62e-27 110
Msa0695990 AT5G64060.1 35.429 175 83 5 15 183 6 156 5.80e-26 106
Msa0695990 AT5G04395.1 35.714 154 81 3 3 138 16 169 1.42e-25 101
Msa0695990 AT3G44290.2 40.310 129 68 4 17 139 16 141 5.06e-25 101
Msa0695990 AT5G22290.1 36.691 139 81 3 3 136 9 145 9.75e-25 103
Msa0695990 AT3G44290.1 40.310 129 68 4 17 139 16 141 2.92e-24 101
Msa0695990 AT4G01550.1 39.535 129 70 4 18 138 7 135 5.99e-21 94.0
Msa0695990 AT3G44350.2 31.507 219 107 10 14 218 4 193 1.47e-20 89.7
Msa0695990 AT3G04420.2 38.760 129 69 4 16 136 4 130 8.66e-20 88.6
Msa0695990 AT3G04420.1 38.760 129 69 4 16 136 4 130 1.47e-19 88.6
Msa0695990 AT5G61430.2 38.462 130 44 4 64 184 2 104 5.54e-19 85.9
Msa0695990 AT1G02230.1 37.692 130 69 5 16 136 4 130 9.00e-19 86.7
Msa0695990 AT1G56010.1 33.333 141 69 4 64 200 2 121 1.48e-17 81.6
Msa0695990 AT3G44350.1 35.036 137 75 5 14 139 4 137 1.66e-17 79.3
Msa0695990 AT5G22380.1 32.222 180 91 7 18 187 8 166 2.22e-17 80.5
Msa0695990 AT4G01520.1 37.681 138 77 5 16 144 5 142 8.56e-17 80.1
Msa0695990 AT4G01540.3 39.231 130 70 5 18 138 7 136 1.95e-16 80.1
Msa0695990 AT4G01540.4 39.231 130 70 5 18 138 7 136 2.16e-16 80.1
Msa0695990 AT4G01540.1 39.231 130 70 5 18 138 7 136 3.22e-16 79.7
Msa0695990 AT4G01540.2 39.231 130 70 5 18 138 7 136 4.81e-16 79.0
Msa0695990 AT3G12977.2 35.484 124 53 4 64 183 14 114 5.01e-16 76.6
Msa0695990 AT4G28530.2 35.938 128 62 2 15 122 10 137 1.46e-15 76.6
Msa0695990 AT4G10350.2 36.885 122 49 4 68 185 18 115 6.93e-15 74.7
Msa0695990 AT1G02250.1 35.878 131 70 6 16 136 4 130 1.16e-14 74.7
Msa0695990 AT1G02220.1 36.154 130 68 6 16 136 4 127 2.11e-14 73.9
Msa0695990 AT1G01010.1 34.091 132 73 6 18 136 6 136 3.47e-14 73.6
Msa0695990 AT5G14000.2 33.588 131 75 5 15 138 15 140 4.98e-14 69.3
Msa0695990 AT5G14000.1 33.588 131 75 5 15 138 15 140 9.83e-14 69.7
Msa0695990 AT2G33480.3 37.209 129 47 6 68 188 8 110 4.28e-13 68.2
Msa0695990 AT3G55210.1 29.534 193 90 6 15 189 11 175 8.44e-13 68.2
Msa0695990 AT5G50820.1 31.250 128 84 3 14 140 16 140 1.52e-12 66.2
Msa0695990 AT3G56530.1 31.538 130 78 4 15 136 52 178 6.99e-11 63.2

Find 81 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAACTTCCGGACATAAAT+TGG 0.154420 4_4:+65740610 Msa0695990:CDS
TTTCATCAAAATTCAATTCT+TGG 0.173199 4_4:+65740555 Msa0695990:CDS
CATGCCAAGGCCACTCTTAA+TGG 0.200176 4_4:+65740170 Msa0695990:CDS
CCCAATAGGGCTGCTACTTC+TGG 0.200373 4_4:+65739551 Msa0695990:CDS
TTTATAGGTAAAGCAAGTTT+TGG 0.250824 4_4:+65739471 Msa0695990:intron
CAAAAGGAGTTAAAACTAAT+TGG 0.262200 4_4:+65739675 Msa0695990:CDS
GAATTCTTCTTGTTATTGTT+TGG 0.278889 4_4:-65739788 None:intergenic
CTATTGGGTCTTGCTCCATT+TGG 0.292483 4_4:-65739536 None:intergenic
CCCAGAAGTAGCAGCCCTAT+TGG 0.308982 4_4:-65739552 None:intergenic
ATTTGGGTATTTCTATCCCT+TGG 0.309339 4_4:-65739519 None:intergenic
TAAATGCATCATCACAGTTT+TGG 0.311946 4_4:+65740397 Msa0695990:CDS
TATTGGGTCTTGCTCCATTT+GGG 0.322648 4_4:-65739535 None:intergenic
GCATTTAGTGCACGTTTCAT+AGG 0.337891 4_4:-65740381 None:intergenic
AATTCAATTCTTGGATCTGT+TGG 0.346734 4_4:+65740564 Msa0695990:CDS
TCTTCAAGCAAACGGTTTCA+TGG 0.349803 4_4:+65740447 Msa0695990:CDS
TTTGGGTATTTCTATCCCTT+GGG 0.378927 4_4:-65739518 None:intergenic
ATCGGAAACCTGGTGGTAGG+TGG 0.399421 4_4:-65739177 None:intergenic
TTCTTCTTGTTATTGTTTGG+AGG 0.403734 4_4:-65739785 None:intergenic
TCTTCAAGAAGCACAAGTTA+TGG 0.409732 4_4:+65740246 Msa0695990:CDS
TGATCCATTAAGAGTGGCCT+TGG 0.412912 4_4:-65740174 None:intergenic
TTCCCATCAGATGTTAATAT+AGG 0.417975 4_4:-65739602 None:intergenic
AATGATCACGGAATGCAAAA+TGG 0.418422 4_4:+65740309 Msa0695990:CDS
CCAGAAGTAGCAGCCCTATT+GGG 0.428179 4_4:-65739551 None:intergenic
CTTCATCGGTGGGGTGGAAT+CGG 0.437306 4_4:-65739195 None:intergenic
TTCGTACTTGGGAGCTCCCA+TGG 0.440454 4_4:-65739307 None:intergenic
TTTCATGGAGATCTTAATAG+TGG 0.440666 4_4:+65740462 Msa0695990:CDS
AATGATGACAATTTCTTCGA+TGG 0.445563 4_4:+65740276 Msa0695990:CDS
AACTAGTTCCAATTTATGTC+CGG 0.449473 4_4:-65740618 None:intergenic
GCTTCTTGAAGATGAATGTT+TGG 0.449692 4_4:-65740235 None:intergenic
CCAATAGGGCTGCTACTTCT+GGG 0.454581 4_4:+65739552 Msa0695990:CDS
ATCTCTGCTATGATGGCTAC+TGG 0.455487 4_4:-65739265 None:intergenic
AAGCCTATATTAACATCTGA+TGG 0.457224 4_4:+65739599 Msa0695990:CDS
GAGGCAACAATTTCAACTTC+CGG 0.462175 4_4:+65740599 Msa0695990:CDS
TGGAATGAAACAGGGTCACC+AGG 0.466947 4_4:+65740417 Msa0695990:CDS
AAATGGAGCAAGACCCAATA+GGG 0.470103 4_4:+65739538 Msa0695990:CDS
CAAATGGAGCAAGACCCAAT+AGG 0.479465 4_4:+65739537 Msa0695990:CDS
GGAAACCTGGTGGTAGGTGG+GGG 0.480157 4_4:-65739174 None:intergenic
AGTGGAATAAGTAGCAATGC+TGG 0.489231 4_4:+65740480 Msa0695990:CDS
ATTGGATCATGCATGAGTAT+AGG 0.492325 4_4:+65739693 Msa0695990:CDS
CATTTAGTGCACGTTTCATA+GGG 0.495376 4_4:-65740380 None:intergenic
GGTCATCTTCTTCAAGCAAA+CGG 0.495966 4_4:+65740439 Msa0695990:CDS
TCTGATGGGAATCAGAAAGT+TGG 0.499516 4_4:+65739614 Msa0695990:CDS
GTGGGGTGGAATCGGAAACC+TGG 0.501175 4_4:-65739187 None:intergenic
CGGAAACCTGGTGGTAGGTG+GGG 0.504339 4_4:-65739175 None:intergenic
TCGGAAACCTGGTGGTAGGT+GGG 0.504413 4_4:-65739176 None:intergenic
GCTATGATGGCTACTGGAAG+TGG 0.505754 4_4:-65739259 None:intergenic
GTGGAATAAGTAGCAATGCT+GGG 0.513945 4_4:+65740481 Msa0695990:CDS
ATTCTTGGATCTGTTGGAGA+TGG 0.516290 4_4:+65740570 Msa0695990:CDS
GAGATCAATCTCTGCTATGA+TGG 0.523237 4_4:-65739272 None:intergenic
AAGTTGTGCTTGGTGGAAGC+TGG 0.530868 4_4:-65740533 None:intergenic
ATCTCTACAAATTCGACCCA+TGG 0.531070 4_4:+65739290 Msa0695990:CDS
TATGGAGGGAAGCCACCAAA+AGG 0.535327 4_4:+65739659 Msa0695990:CDS
TGTGCATATACATACCCTTA+GGG 0.545490 4_4:-65739810 None:intergenic
GGTTGTGACACAAACTCAAA+GGG 0.556107 4_4:+65740330 Msa0695990:CDS
TGATGAAAAGTTGTGCTTGG+TGG 0.557736 4_4:-65740540 None:intergenic
AAGGGATAGAAATACCCAAA+TGG 0.558551 4_4:+65739521 Msa0695990:CDS
ACTACGAGTTCTTCATCGGT+GGG 0.558882 4_4:-65739205 None:intergenic
TTGTTTGGAGGATGATCAGA+AGG 0.562065 4_4:-65739773 None:intergenic
GGATGATCAGAAGGCAGAGG+AGG 0.572911 4_4:-65739764 None:intergenic
GGAGGATGATCAGAAGGCAG+AGG 0.572927 4_4:-65739767 None:intergenic
ATAACAAGAAGAATTCCCTA+AGG 0.573041 4_4:+65739795 Msa0695990:CDS
CGAGTTCTTCATCGGTGGGG+TGG 0.573171 4_4:-65739201 None:intergenic
TCGTACTTGGGAGCTCCCAT+GGG 0.577363 4_4:-65739306 None:intergenic
TGGTTGTGACACAAACTCAA+AGG 0.577669 4_4:+65740329 Msa0695990:CDS
GGAATCGGAAACCTGGTGGT+AGG 0.585801 4_4:-65739180 None:intergenic
CATTAAGAGTGGCCTTGGCA+TGG 0.590428 4_4:-65740169 None:intergenic
GTGAACTACGAGTTCTTCAT+CGG 0.590635 4_4:-65739209 None:intergenic
AGCCTATATTAACATCTGAT+GGG 0.592875 4_4:+65739600 Msa0695990:CDS
GGAATCTTTGCAAATGATCA+CGG 0.595620 4_4:+65740297 Msa0695990:CDS
AACTACGAGTTCTTCATCGG+TGG 0.606004 4_4:-65739206 None:intergenic
GCAACAGTAGCACCATGCCA+AGG 0.616723 4_4:+65740157 Msa0695990:CDS
TCTCTACAAATTCGACCCAT+GGG 0.621113 4_4:+65739291 Msa0695990:CDS
TGGAATAAGTAGCAATGCTG+GGG 0.627641 4_4:+65740482 Msa0695990:CDS
TAACAAGAAGAATTCCCTAA+GGG 0.639219 4_4:+65739796 Msa0695990:CDS
CTACGAGTTCTTCATCGGTG+GGG 0.640544 4_4:-65739204 None:intergenic
CTGTTGGAGATGGTGTAATG+AGG 0.645707 4_4:+65740580 Msa0695990:CDS
TCATATTGATCCATTAAGAG+TGG 0.647276 4_4:-65740180 None:intergenic
GGAATGAAACAGGGTCACCA+GGG 0.654300 4_4:+65740418 Msa0695990:CDS
GGGTGGAATCGGAAACCTGG+TGG 0.682142 4_4:-65739184 None:intergenic
TTGCTTGAAGAAGATGACCC+TGG 0.699438 4_4:-65740435 None:intergenic
TGTGACACAAACTCAAAGGG+TGG 0.701015 4_4:+65740333 Msa0695990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTGTTTTTTTTTTTTTTTAT+AGG + chr4_4:65739456-65739475 Msa0695990:intron 10.0%
!! AATTAATAAATAATTGAACA+TGG + chr4_4:65739867-65739886 Msa0695990:intron 10.0%
!!! TTAACATTTTTTTATTGTAT+TGG + chr4_4:65740089-65740108 Msa0695990:intron 10.0%
!!! CTGTTTTTTTTTTTTTTTAT+AGG + chr4_4:65739456-65739475 Msa0695990:intron 10.0%
!! AATTAATAAATAATTGAACA+TGG + chr4_4:65739867-65739886 Msa0695990:intron 10.0%
!!! TTAACATTTTTTTATTGTAT+TGG + chr4_4:65740089-65740108 Msa0695990:intron 10.0%
!!! TTTTTTTATTGTATTGGTTT+TGG + chr4_4:65740095-65740114 Msa0695990:intron 15.0%
!!! TTTTTTTATTGTATTGGTTT+TGG + chr4_4:65740095-65740114 Msa0695990:intron 15.0%
!! AAAATTTCATATGCAAAACA+TGG - chr4_4:65739398-65739417 None:intergenic 20.0%
!! AAAAAAAACAGAGAAAAAAC+AGG - chr4_4:65739447-65739466 None:intergenic 20.0%
!!! GTTTTGTTGCATATTATTAT+AGG - chr4_4:65740214-65740233 None:intergenic 20.0%
!! TTTCATCAAAATTCAATTCT+TGG + chr4_4:65740555-65740574 Msa0695990:CDS 20.0%
!! AAAATTTCATATGCAAAACA+TGG - chr4_4:65739398-65739417 None:intergenic 20.0%
!! AAAAAAAACAGAGAAAAAAC+AGG - chr4_4:65739447-65739466 None:intergenic 20.0%
!!! GTTTTGTTGCATATTATTAT+AGG - chr4_4:65740214-65740233 None:intergenic 20.0%
!! TTTCATCAAAATTCAATTCT+TGG + chr4_4:65740555-65740574 Msa0695990:CDS 20.0%
! AATGGATGAAAAGATGAAAT+GGG - chr4_4:65739345-65739364 None:intergenic 25.0%
! AAATGGATGAAAAGATGAAA+TGG - chr4_4:65739346-65739365 None:intergenic 25.0%
! AAACATGGAACATAAAATCT+AGG - chr4_4:65739383-65739402 None:intergenic 25.0%
! GAAAAAACAGGACAATATTT+CGG - chr4_4:65739435-65739454 None:intergenic 25.0%
!! TTTATAGGTAAAGCAAGTTT+TGG + chr4_4:65739471-65739490 Msa0695990:intron 25.0%
!! TTATAGGTAAAGCAAGTTTT+GGG + chr4_4:65739472-65739491 Msa0695990:intron 25.0%
!!! AAGAAAGCACTTGTTTTTTA+TGG + chr4_4:65739641-65739660 Msa0695990:CDS 25.0%
!!! CAATTAGTTTTAACTCCTTT+TGG - chr4_4:65739677-65739696 None:intergenic 25.0%
! CAAAAGGAGTTAAAACTAAT+TGG + chr4_4:65739675-65739694 Msa0695990:CDS 25.0%
!! AGTTTTTGAACTTGCATTAT+AGG - chr4_4:65739744-65739763 None:intergenic 25.0%
!!! GAATTCTTCTTGTTATTGTT+TGG - chr4_4:65739791-65739810 None:intergenic 25.0%
! ATTTATGAAACAAATGCACA+TGG - chr4_4:65739850-65739869 None:intergenic 25.0%
! ATATGCATAGTTATGAAACA+CGG + chr4_4:65739960-65739979 Msa0695990:intron 25.0%
!!! CGCTAATAATTTTAGAAAAC+CGG + chr4_4:65740009-65740028 Msa0695990:intron 25.0%
!!! GCTAATAATTTTAGAAAACC+GGG + chr4_4:65740010-65740029 Msa0695990:intron 25.0%
!!! CTAATAATTTTAGAAAACCG+GGG + chr4_4:65740011-65740030 Msa0695990:intron 25.0%
! AATGAATATGCAATGAAACA+CGG - chr4_4:65740042-65740061 None:intergenic 25.0%
!!! TGTTGCTTTTCTTGTATATT+CGG - chr4_4:65740143-65740162 None:intergenic 25.0%
! AATGGATGAAAAGATGAAAT+GGG - chr4_4:65739345-65739364 None:intergenic 25.0%
! AAATGGATGAAAAGATGAAA+TGG - chr4_4:65739346-65739365 None:intergenic 25.0%
! AAACATGGAACATAAAATCT+AGG - chr4_4:65739383-65739402 None:intergenic 25.0%
! GAAAAAACAGGACAATATTT+CGG - chr4_4:65739435-65739454 None:intergenic 25.0%
!! TTTATAGGTAAAGCAAGTTT+TGG + chr4_4:65739471-65739490 Msa0695990:intron 25.0%
!! TTATAGGTAAAGCAAGTTTT+GGG + chr4_4:65739472-65739491 Msa0695990:intron 25.0%
!!! AAGAAAGCACTTGTTTTTTA+TGG + chr4_4:65739641-65739660 Msa0695990:CDS 25.0%
!!! CAATTAGTTTTAACTCCTTT+TGG - chr4_4:65739677-65739696 None:intergenic 25.0%
! CAAAAGGAGTTAAAACTAAT+TGG + chr4_4:65739675-65739694 Msa0695990:CDS 25.0%
!! AGTTTTTGAACTTGCATTAT+AGG - chr4_4:65739744-65739763 None:intergenic 25.0%
!!! GAATTCTTCTTGTTATTGTT+TGG - chr4_4:65739791-65739810 None:intergenic 25.0%
! ATTTATGAAACAAATGCACA+TGG - chr4_4:65739850-65739869 None:intergenic 25.0%
! ATATGCATAGTTATGAAACA+CGG + chr4_4:65739960-65739979 Msa0695990:intron 25.0%
!!! CGCTAATAATTTTAGAAAAC+CGG + chr4_4:65740009-65740028 Msa0695990:intron 25.0%
!!! GCTAATAATTTTAGAAAACC+GGG + chr4_4:65740010-65740029 Msa0695990:intron 25.0%
!!! CTAATAATTTTAGAAAACCG+GGG + chr4_4:65740011-65740030 Msa0695990:intron 25.0%
! AATGAATATGCAATGAAACA+CGG - chr4_4:65740042-65740061 None:intergenic 25.0%
!!! TGTTGCTTTTCTTGTATATT+CGG - chr4_4:65740143-65740162 None:intergenic 25.0%
TGTGAAAAAGTTTCGTACTT+GGG - chr4_4:65739321-65739340 None:intergenic 30.0%
ATGGATGAAAAGATGAAATG+GGG - chr4_4:65739344-65739363 None:intergenic 30.0%
! GAACATAAAATCTAGGATGT+AGG - chr4_4:65739376-65739395 None:intergenic 30.0%
! TATAGGTAAAGCAAGTTTTG+GGG + chr4_4:65739473-65739492 Msa0695990:intron 30.0%
AAGCCTATATTAACATCTGA+TGG + chr4_4:65739599-65739618 Msa0695990:CDS 30.0%
AGCCTATATTAACATCTGAT+GGG + chr4_4:65739600-65739619 Msa0695990:CDS 30.0%
TTCCCATCAGATGTTAATAT+AGG - chr4_4:65739605-65739624 None:intergenic 30.0%
!!! AAAGCACTTGTTTTTTATGG+AGG + chr4_4:65739644-65739663 Msa0695990:CDS 30.0%
!!! AAGCACTTGTTTTTTATGGA+GGG + chr4_4:65739645-65739664 Msa0695990:CDS 30.0%
!!! TTAGTTTTAACTCCTTTTGG+TGG - chr4_4:65739674-65739693 None:intergenic 30.0%
!! TTCTTCTTGTTATTGTTTGG+AGG - chr4_4:65739788-65739807 None:intergenic 30.0%
ATAACAAGAAGAATTCCCTA+AGG + chr4_4:65739795-65739814 Msa0695990:CDS 30.0%
TAACAAGAAGAATTCCCTAA+GGG + chr4_4:65739796-65739815 Msa0695990:CDS 30.0%
AAGATCAGACCATTCAAAAA+AGG - chr4_4:65739919-65739938 None:intergenic 30.0%
TCATATTGATCCATTAAGAG+TGG - chr4_4:65740183-65740202 None:intergenic 30.0%
AATGATGACAATTTCTTCGA+TGG + chr4_4:65740276-65740295 Msa0695990:CDS 30.0%
! TAAATGCATCATCACAGTTT+TGG + chr4_4:65740397-65740416 Msa0695990:CDS 30.0%
TTTCATGGAGATCTTAATAG+TGG + chr4_4:65740462-65740481 Msa0695990:CDS 30.0%
! TTTTGATGAAAAGTTGTGCT+TGG - chr4_4:65740546-65740565 None:intergenic 30.0%
AATTCAATTCTTGGATCTGT+TGG + chr4_4:65740564-65740583 Msa0695990:CDS 30.0%
TGTGAAAAAGTTTCGTACTT+GGG - chr4_4:65739321-65739340 None:intergenic 30.0%
ATGGATGAAAAGATGAAATG+GGG - chr4_4:65739344-65739363 None:intergenic 30.0%
! GAACATAAAATCTAGGATGT+AGG - chr4_4:65739376-65739395 None:intergenic 30.0%
! TATAGGTAAAGCAAGTTTTG+GGG + chr4_4:65739473-65739492 Msa0695990:intron 30.0%
AAGCCTATATTAACATCTGA+TGG + chr4_4:65739599-65739618 Msa0695990:CDS 30.0%
AGCCTATATTAACATCTGAT+GGG + chr4_4:65739600-65739619 Msa0695990:CDS 30.0%
TTCCCATCAGATGTTAATAT+AGG - chr4_4:65739605-65739624 None:intergenic 30.0%
!!! AAAGCACTTGTTTTTTATGG+AGG + chr4_4:65739644-65739663 Msa0695990:CDS 30.0%
!!! AAGCACTTGTTTTTTATGGA+GGG + chr4_4:65739645-65739664 Msa0695990:CDS 30.0%
!!! TTAGTTTTAACTCCTTTTGG+TGG - chr4_4:65739674-65739693 None:intergenic 30.0%
!! TTCTTCTTGTTATTGTTTGG+AGG - chr4_4:65739788-65739807 None:intergenic 30.0%
ATAACAAGAAGAATTCCCTA+AGG + chr4_4:65739795-65739814 Msa0695990:CDS 30.0%
TAACAAGAAGAATTCCCTAA+GGG + chr4_4:65739796-65739815 Msa0695990:CDS 30.0%
AAGATCAGACCATTCAAAAA+AGG - chr4_4:65739919-65739938 None:intergenic 30.0%
TCATATTGATCCATTAAGAG+TGG - chr4_4:65740183-65740202 None:intergenic 30.0%
AATGATGACAATTTCTTCGA+TGG + chr4_4:65740276-65740295 Msa0695990:CDS 30.0%
! TAAATGCATCATCACAGTTT+TGG + chr4_4:65740397-65740416 Msa0695990:CDS 30.0%
TTTCATGGAGATCTTAATAG+TGG + chr4_4:65740462-65740481 Msa0695990:CDS 30.0%
! TTTTGATGAAAAGTTGTGCT+TGG - chr4_4:65740546-65740565 None:intergenic 30.0%
AATTCAATTCTTGGATCTGT+TGG + chr4_4:65740564-65740583 Msa0695990:CDS 30.0%
GTGTGAAAAAGTTTCGTACT+TGG - chr4_4:65739322-65739341 None:intergenic 35.0%
AGGATGTAGGTTTGAGTAAA+TGG - chr4_4:65739363-65739382 None:intergenic 35.0%
! TTTGGGTATTTCTATCCCTT+GGG - chr4_4:65739521-65739540 None:intergenic 35.0%
! ATTTGGGTATTTCTATCCCT+TGG - chr4_4:65739522-65739541 None:intergenic 35.0%
AAGGGATAGAAATACCCAAA+TGG + chr4_4:65739521-65739540 Msa0695990:CDS 35.0%
ATTGGATCATGCATGAGTAT+AGG + chr4_4:65739693-65739712 Msa0695990:CDS 35.0%
TGTGCATATACATACCCTTA+GGG - chr4_4:65739813-65739832 None:intergenic 35.0%
!!! CTCTCTGTTCCTTTTTTGAA+TGG + chr4_4:65739907-65739926 Msa0695990:intron 35.0%
!! ATAATTTTAGAAAACCGGGG+AGG + chr4_4:65740014-65740033 Msa0695990:intron 35.0%
!! TAATTTTAGAAAACCGGGGA+GGG + chr4_4:65740015-65740034 Msa0695990:intron 35.0%
GCTTCTTGAAGATGAATGTT+TGG - chr4_4:65740238-65740257 None:intergenic 35.0%
! TCTTCAAGAAGCACAAGTTA+TGG + chr4_4:65740246-65740265 Msa0695990:CDS 35.0%
GGAATCTTTGCAAATGATCA+CGG + chr4_4:65740297-65740316 Msa0695990:CDS 35.0%
AATGATCACGGAATGCAAAA+TGG + chr4_4:65740309-65740328 Msa0695990:CDS 35.0%
CATTTAGTGCACGTTTCATA+GGG - chr4_4:65740383-65740402 None:intergenic 35.0%
!!! TCACAGTTTTGGAATGAAAC+AGG + chr4_4:65740408-65740427 Msa0695990:CDS 35.0%
!!! CACAGTTTTGGAATGAAACA+GGG + chr4_4:65740409-65740428 Msa0695990:CDS 35.0%
TTCAACTTCCGGACATAAAT+TGG + chr4_4:65740610-65740629 Msa0695990:CDS 35.0%
GTGTGAAAAAGTTTCGTACT+TGG - chr4_4:65739322-65739341 None:intergenic 35.0%
AGGATGTAGGTTTGAGTAAA+TGG - chr4_4:65739363-65739382 None:intergenic 35.0%
! TTTGGGTATTTCTATCCCTT+GGG - chr4_4:65739521-65739540 None:intergenic 35.0%
! ATTTGGGTATTTCTATCCCT+TGG - chr4_4:65739522-65739541 None:intergenic 35.0%
AAGGGATAGAAATACCCAAA+TGG + chr4_4:65739521-65739540 Msa0695990:CDS 35.0%
ATTGGATCATGCATGAGTAT+AGG + chr4_4:65739693-65739712 Msa0695990:CDS 35.0%
TGTGCATATACATACCCTTA+GGG - chr4_4:65739813-65739832 None:intergenic 35.0%
!!! CTCTCTGTTCCTTTTTTGAA+TGG + chr4_4:65739907-65739926 Msa0695990:intron 35.0%
!! ATAATTTTAGAAAACCGGGG+AGG + chr4_4:65740014-65740033 Msa0695990:intron 35.0%
!! TAATTTTAGAAAACCGGGGA+GGG + chr4_4:65740015-65740034 Msa0695990:intron 35.0%
GCTTCTTGAAGATGAATGTT+TGG - chr4_4:65740238-65740257 None:intergenic 35.0%
! TCTTCAAGAAGCACAAGTTA+TGG + chr4_4:65740246-65740265 Msa0695990:CDS 35.0%
GGAATCTTTGCAAATGATCA+CGG + chr4_4:65740297-65740316 Msa0695990:CDS 35.0%
AATGATCACGGAATGCAAAA+TGG + chr4_4:65740309-65740328 Msa0695990:CDS 35.0%
CATTTAGTGCACGTTTCATA+GGG - chr4_4:65740383-65740402 None:intergenic 35.0%
!!! TCACAGTTTTGGAATGAAAC+AGG + chr4_4:65740408-65740427 Msa0695990:CDS 35.0%
!!! CACAGTTTTGGAATGAAACA+GGG + chr4_4:65740409-65740428 Msa0695990:CDS 35.0%
TTCAACTTCCGGACATAAAT+TGG + chr4_4:65740610-65740629 Msa0695990:CDS 35.0%
GTGAACTACGAGTTCTTCAT+CGG - chr4_4:65739212-65739231 None:intergenic 40.0%
! CAGAAGCAGCTTTTCTTTTG+AGG - chr4_4:65739237-65739256 None:intergenic 40.0%
GAGATCAATCTCTGCTATGA+TGG - chr4_4:65739275-65739294 None:intergenic 40.0%
ATCTCTACAAATTCGACCCA+TGG + chr4_4:65739290-65739309 Msa0695990:CDS 40.0%
TCTCTACAAATTCGACCCAT+GGG + chr4_4:65739291-65739310 Msa0695990:CDS 40.0%
TATTGGGTCTTGCTCCATTT+GGG - chr4_4:65739538-65739557 None:intergenic 40.0%
AAATGGAGCAAGACCCAATA+GGG + chr4_4:65739538-65739557 Msa0695990:CDS 40.0%
TCTGATGGGAATCAGAAAGT+TGG + chr4_4:65739614-65739633 Msa0695990:CDS 40.0%
TTGTTTGGAGGATGATCAGA+AGG - chr4_4:65739776-65739795 None:intergenic 40.0%
GTGTGCATATACATACCCTT+AGG - chr4_4:65739814-65739833 None:intergenic 40.0%
!!! TGGTTTTGGAGCTTGATGAT+TGG + chr4_4:65740109-65740128 Msa0695990:intron 40.0%
!!! GGTTTTGGAGCTTGATGATT+GGG + chr4_4:65740110-65740129 Msa0695990:intron 40.0%
TGGTTGTGACACAAACTCAA+AGG + chr4_4:65740329-65740348 Msa0695990:CDS 40.0%
GGTTGTGACACAAACTCAAA+GGG + chr4_4:65740330-65740349 Msa0695990:CDS 40.0%
GCATTTAGTGCACGTTTCAT+AGG - chr4_4:65740384-65740403 None:intergenic 40.0%
GGTCATCTTCTTCAAGCAAA+CGG + chr4_4:65740439-65740458 Msa0695990:CDS 40.0%
TCTTCAAGCAAACGGTTTCA+TGG + chr4_4:65740447-65740466 Msa0695990:CDS 40.0%
AGTGGAATAAGTAGCAATGC+TGG + chr4_4:65740480-65740499 Msa0695990:CDS 40.0%
GTGGAATAAGTAGCAATGCT+GGG + chr4_4:65740481-65740500 Msa0695990:CDS 40.0%
TGGAATAAGTAGCAATGCTG+GGG + chr4_4:65740482-65740501 Msa0695990:CDS 40.0%
TGATGAAAAGTTGTGCTTGG+TGG - chr4_4:65740543-65740562 None:intergenic 40.0%
ATTCTTGGATCTGTTGGAGA+TGG + chr4_4:65740570-65740589 Msa0695990:CDS 40.0%
GAGGCAACAATTTCAACTTC+CGG + chr4_4:65740599-65740618 Msa0695990:CDS 40.0%
GTGAACTACGAGTTCTTCAT+CGG - chr4_4:65739212-65739231 None:intergenic 40.0%
! CAGAAGCAGCTTTTCTTTTG+AGG - chr4_4:65739237-65739256 None:intergenic 40.0%
GAGATCAATCTCTGCTATGA+TGG - chr4_4:65739275-65739294 None:intergenic 40.0%
ATCTCTACAAATTCGACCCA+TGG + chr4_4:65739290-65739309 Msa0695990:CDS 40.0%
TCTCTACAAATTCGACCCAT+GGG + chr4_4:65739291-65739310 Msa0695990:CDS 40.0%
TATTGGGTCTTGCTCCATTT+GGG - chr4_4:65739538-65739557 None:intergenic 40.0%
AAATGGAGCAAGACCCAATA+GGG + chr4_4:65739538-65739557 Msa0695990:CDS 40.0%
TCTGATGGGAATCAGAAAGT+TGG + chr4_4:65739614-65739633 Msa0695990:CDS 40.0%
TTGTTTGGAGGATGATCAGA+AGG - chr4_4:65739776-65739795 None:intergenic 40.0%
GTGTGCATATACATACCCTT+AGG - chr4_4:65739814-65739833 None:intergenic 40.0%
!!! TGGTTTTGGAGCTTGATGAT+TGG + chr4_4:65740109-65740128 Msa0695990:intron 40.0%
!!! GGTTTTGGAGCTTGATGATT+GGG + chr4_4:65740110-65740129 Msa0695990:intron 40.0%
TGGTTGTGACACAAACTCAA+AGG + chr4_4:65740329-65740348 Msa0695990:CDS 40.0%
GGTTGTGACACAAACTCAAA+GGG + chr4_4:65740330-65740349 Msa0695990:CDS 40.0%
GCATTTAGTGCACGTTTCAT+AGG - chr4_4:65740384-65740403 None:intergenic 40.0%
GGTCATCTTCTTCAAGCAAA+CGG + chr4_4:65740439-65740458 Msa0695990:CDS 40.0%
TCTTCAAGCAAACGGTTTCA+TGG + chr4_4:65740447-65740466 Msa0695990:CDS 40.0%
AGTGGAATAAGTAGCAATGC+TGG + chr4_4:65740480-65740499 Msa0695990:CDS 40.0%
GTGGAATAAGTAGCAATGCT+GGG + chr4_4:65740481-65740500 Msa0695990:CDS 40.0%
TGGAATAAGTAGCAATGCTG+GGG + chr4_4:65740482-65740501 Msa0695990:CDS 40.0%
TGATGAAAAGTTGTGCTTGG+TGG - chr4_4:65740543-65740562 None:intergenic 40.0%
ATTCTTGGATCTGTTGGAGA+TGG + chr4_4:65740570-65740589 Msa0695990:CDS 40.0%
GAGGCAACAATTTCAACTTC+CGG + chr4_4:65740599-65740618 Msa0695990:CDS 40.0%
ACTACGAGTTCTTCATCGGT+GGG - chr4_4:65739208-65739227 None:intergenic 45.0%
AACTACGAGTTCTTCATCGG+TGG - chr4_4:65739209-65739228 None:intergenic 45.0%
ATCTCTGCTATGATGGCTAC+TGG - chr4_4:65739268-65739287 None:intergenic 45.0%
!!! CAAGTTTTGGGGAACAAGAG+TGG + chr4_4:65739484-65739503 Msa0695990:CDS 45.0%
!!! AGTGGTACTTTTTCAGCCCA+AGG + chr4_4:65739502-65739521 Msa0695990:CDS 45.0%
!!! GTGGTACTTTTTCAGCCCAA+GGG + chr4_4:65739503-65739522 Msa0695990:CDS 45.0%
CTATTGGGTCTTGCTCCATT+TGG - chr4_4:65739539-65739558 None:intergenic 45.0%
CAAATGGAGCAAGACCCAAT+AGG + chr4_4:65739537-65739556 Msa0695990:CDS 45.0%
!! TCTGGGTATTGGAAAGCTAC+TGG + chr4_4:65739569-65739588 Msa0695990:intron 45.0%
TGATCCATTAAGAGTGGCCT+TGG - chr4_4:65740177-65740196 None:intergenic 45.0%
TGTGACACAAACTCAAAGGG+TGG + chr4_4:65740333-65740352 Msa0695990:CDS 45.0%
TTGCTTGAAGAAGATGACCC+TGG - chr4_4:65740438-65740457 None:intergenic 45.0%
CTGTTGGAGATGGTGTAATG+AGG + chr4_4:65740580-65740599 Msa0695990:CDS 45.0%
ACTACGAGTTCTTCATCGGT+GGG - chr4_4:65739208-65739227 None:intergenic 45.0%
AACTACGAGTTCTTCATCGG+TGG - chr4_4:65739209-65739228 None:intergenic 45.0%
ATCTCTGCTATGATGGCTAC+TGG - chr4_4:65739268-65739287 None:intergenic 45.0%
!!! CAAGTTTTGGGGAACAAGAG+TGG + chr4_4:65739484-65739503 Msa0695990:CDS 45.0%
!!! AGTGGTACTTTTTCAGCCCA+AGG + chr4_4:65739502-65739521 Msa0695990:CDS 45.0%
!!! GTGGTACTTTTTCAGCCCAA+GGG + chr4_4:65739503-65739522 Msa0695990:CDS 45.0%
CTATTGGGTCTTGCTCCATT+TGG - chr4_4:65739539-65739558 None:intergenic 45.0%
CAAATGGAGCAAGACCCAAT+AGG + chr4_4:65739537-65739556 Msa0695990:CDS 45.0%
!! TCTGGGTATTGGAAAGCTAC+TGG + chr4_4:65739569-65739588 Msa0695990:intron 45.0%
TGATCCATTAAGAGTGGCCT+TGG - chr4_4:65740177-65740196 None:intergenic 45.0%
TGTGACACAAACTCAAAGGG+TGG + chr4_4:65740333-65740352 Msa0695990:CDS 45.0%
TTGCTTGAAGAAGATGACCC+TGG - chr4_4:65740438-65740457 None:intergenic 45.0%
CTGTTGGAGATGGTGTAATG+AGG + chr4_4:65740580-65740599 Msa0695990:CDS 45.0%
CTACGAGTTCTTCATCGGTG+GGG - chr4_4:65739207-65739226 None:intergenic 50.0%
GCTATGATGGCTACTGGAAG+TGG - chr4_4:65739262-65739281 None:intergenic 50.0%
CCAGAAGTAGCAGCCCTATT+GGG - chr4_4:65739554-65739573 None:intergenic 50.0%
! CCAATAGGGCTGCTACTTCT+GGG + chr4_4:65739552-65739571 Msa0695990:CDS 50.0%
TATGGAGGGAAGCCACCAAA+AGG + chr4_4:65739659-65739678 Msa0695990:CDS 50.0%
! CATTAAGAGTGGCCTTGGCA+TGG - chr4_4:65740172-65740191 None:intergenic 50.0%
CATGCCAAGGCCACTCTTAA+TGG + chr4_4:65740170-65740189 Msa0695990:CDS 50.0%
TGGAATGAAACAGGGTCACC+AGG + chr4_4:65740417-65740436 Msa0695990:CDS 50.0%
GGAATGAAACAGGGTCACCA+GGG + chr4_4:65740418-65740437 Msa0695990:CDS 50.0%
! AAGTTGTGCTTGGTGGAAGC+TGG - chr4_4:65740536-65740555 None:intergenic 50.0%
CTACGAGTTCTTCATCGGTG+GGG - chr4_4:65739207-65739226 None:intergenic 50.0%
GCTATGATGGCTACTGGAAG+TGG - chr4_4:65739262-65739281 None:intergenic 50.0%
CCAGAAGTAGCAGCCCTATT+GGG - chr4_4:65739554-65739573 None:intergenic 50.0%
! CCAATAGGGCTGCTACTTCT+GGG + chr4_4:65739552-65739571 Msa0695990:CDS 50.0%
TATGGAGGGAAGCCACCAAA+AGG + chr4_4:65739659-65739678 Msa0695990:CDS 50.0%
! CATTAAGAGTGGCCTTGGCA+TGG - chr4_4:65740172-65740191 None:intergenic 50.0%
CATGCCAAGGCCACTCTTAA+TGG + chr4_4:65740170-65740189 Msa0695990:CDS 50.0%
TGGAATGAAACAGGGTCACC+AGG + chr4_4:65740417-65740436 Msa0695990:CDS 50.0%
GGAATGAAACAGGGTCACCA+GGG + chr4_4:65740418-65740437 Msa0695990:CDS 50.0%
! AAGTTGTGCTTGGTGGAAGC+TGG - chr4_4:65740536-65740555 None:intergenic 50.0%
TCGGAAACCTGGTGGTAGGT+GGG - chr4_4:65739179-65739198 None:intergenic 55.0%
ATCGGAAACCTGGTGGTAGG+TGG - chr4_4:65739180-65739199 None:intergenic 55.0%
GGAATCGGAAACCTGGTGGT+AGG - chr4_4:65739183-65739202 None:intergenic 55.0%
CTTCATCGGTGGGGTGGAAT+CGG - chr4_4:65739198-65739217 None:intergenic 55.0%
TCGTACTTGGGAGCTCCCAT+GGG - chr4_4:65739309-65739328 None:intergenic 55.0%
TTCGTACTTGGGAGCTCCCA+TGG - chr4_4:65739310-65739329 None:intergenic 55.0%
! CCCAATAGGGCTGCTACTTC+TGG + chr4_4:65739551-65739570 Msa0695990:CDS 55.0%
CCCAGAAGTAGCAGCCCTAT+TGG - chr4_4:65739555-65739574 None:intergenic 55.0%
! GGGCTGCTACTTCTGGGTAT+TGG + chr4_4:65739558-65739577 Msa0695990:intron 55.0%
GGATGATCAGAAGGCAGAGG+AGG - chr4_4:65739767-65739786 None:intergenic 55.0%
GGAGGATGATCAGAAGGCAG+AGG - chr4_4:65739770-65739789 None:intergenic 55.0%
AATGAAACACGGACCCTCCC+CGG - chr4_4:65740031-65740050 None:intergenic 55.0%
GCAACAGTAGCACCATGCCA+AGG + chr4_4:65740157-65740176 Msa0695990:CDS 55.0%
TCGGAAACCTGGTGGTAGGT+GGG - chr4_4:65739179-65739198 None:intergenic 55.0%
ATCGGAAACCTGGTGGTAGG+TGG - chr4_4:65739180-65739199 None:intergenic 55.0%
GGAATCGGAAACCTGGTGGT+AGG - chr4_4:65739183-65739202 None:intergenic 55.0%
CTTCATCGGTGGGGTGGAAT+CGG - chr4_4:65739198-65739217 None:intergenic 55.0%
TCGTACTTGGGAGCTCCCAT+GGG - chr4_4:65739309-65739328 None:intergenic 55.0%
TTCGTACTTGGGAGCTCCCA+TGG - chr4_4:65739310-65739329 None:intergenic 55.0%
! CCCAATAGGGCTGCTACTTC+TGG + chr4_4:65739551-65739570 Msa0695990:CDS 55.0%
CCCAGAAGTAGCAGCCCTAT+TGG - chr4_4:65739555-65739574 None:intergenic 55.0%
! GGGCTGCTACTTCTGGGTAT+TGG + chr4_4:65739558-65739577 Msa0695990:intron 55.0%
GGATGATCAGAAGGCAGAGG+AGG - chr4_4:65739767-65739786 None:intergenic 55.0%
GGAGGATGATCAGAAGGCAG+AGG - chr4_4:65739770-65739789 None:intergenic 55.0%
AATGAAACACGGACCCTCCC+CGG - chr4_4:65740031-65740050 None:intergenic 55.0%
GCAACAGTAGCACCATGCCA+AGG + chr4_4:65740157-65740176 Msa0695990:CDS 55.0%
GGAAACCTGGTGGTAGGTGG+GGG - chr4_4:65739177-65739196 None:intergenic 60.0%
CGGAAACCTGGTGGTAGGTG+GGG - chr4_4:65739178-65739197 None:intergenic 60.0%
GGGTGGAATCGGAAACCTGG+TGG - chr4_4:65739187-65739206 None:intergenic 60.0%
GTGGGGTGGAATCGGAAACC+TGG - chr4_4:65739190-65739209 None:intergenic 60.0%
CGAGTTCTTCATCGGTGGGG+TGG - chr4_4:65739204-65739223 None:intergenic 60.0%
GGAAACCTGGTGGTAGGTGG+GGG - chr4_4:65739177-65739196 None:intergenic 60.0%
CGGAAACCTGGTGGTAGGTG+GGG - chr4_4:65739178-65739197 None:intergenic 60.0%
GGGTGGAATCGGAAACCTGG+TGG - chr4_4:65739187-65739206 None:intergenic 60.0%
GTGGGGTGGAATCGGAAACC+TGG - chr4_4:65739190-65739209 None:intergenic 60.0%
CGAGTTCTTCATCGGTGGGG+TGG - chr4_4:65739204-65739223 None:intergenic 60.0%
CCTGGTGGTAGGTGGGGGTG+TGG - chr4_4:65739172-65739191 None:intergenic 70.0%
CCACACCCCCACCTACCACC+AGG + chr4_4:65739169-65739188 Msa0695990:CDS 70.0%
CCTGGTGGTAGGTGGGGGTG+TGG - chr4_4:65739172-65739191 None:intergenic 70.0%
CCACACCCCCACCTACCACC+AGG + chr4_4:65739169-65739188 Msa0695990:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 65739139 65740638 65739139 ID=Msa0695990;Name=Msa0695990
chr4_4 mRNA 65739139 65740638 65739139 ID=Msa0695990-mRNA-1;Parent=Msa0695990;Name=Msa0695990-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.33|0|1|1|1|4|0|343
chr4_4 exon 65739139 65739322 65739139 ID=Msa0695990-mRNA-1:exon:19022;Parent=Msa0695990-mRNA-1
chr4_4 exon 65739478 65739573 65739478 ID=Msa0695990-mRNA-1:exon:19023;Parent=Msa0695990-mRNA-1
chr4_4 exon 65739585 65739817 65739585 ID=Msa0695990-mRNA-1:exon:19024;Parent=Msa0695990-mRNA-1
chr4_4 exon 65740120 65740638 65740120 ID=Msa0695990-mRNA-1:exon:19025;Parent=Msa0695990-mRNA-1
chr4_4 CDS 65739139 65739322 65739139 ID=Msa0695990-mRNA-1:cds;Parent=Msa0695990-mRNA-1
chr4_4 CDS 65739478 65739573 65739478 ID=Msa0695990-mRNA-1:cds;Parent=Msa0695990-mRNA-1
chr4_4 CDS 65739585 65739817 65739585 ID=Msa0695990-mRNA-1:cds;Parent=Msa0695990-mRNA-1
chr4_4 CDS 65740120 65740638 65740120 ID=Msa0695990-mRNA-1:cds;Parent=Msa0695990-mRNA-1
Gene Sequence

>Msa0695990

ATGGACAGCACAGATTCATCATCTTGCTCTCCACACCCCCACCTACCACCAGGTTTCCGATTCCACCCCACCGATGAAGAACTCGTAGTTCACTACCTCAAAAGAAAAGCTGCTTCTGCACCACTTCCAGTAGCCATCATAGCAGAGATTGATCTCTACAAATTCGACCCATGGGAGCTCCCAAGTAAAGCAAGTTTTGGGGAACAAGAGTGGTACTTTTTCAGCCCAAGGGATAGAAATACCCAAATGGAGCAAGACCCAATAGGGCTGCTACTTCTGGCTACTGGAACTGATAAGCCTATATTAACATCTGATGGGAATCAGAAAGTTGGAGTTAAGAAAGCACTTGTTTTTTATGGAGGGAAGCCACCAAAAGGAGTTAAAACTAATTGGATCATGCATGAGTATAGGCTCATCACTGATTATAATCATAATTCCTATAATGCAAGTTCAAAAACTCCTCCTCTGCCTTCTGATCATCCTCCAAACAATAACAAGAAGAATTCCCTAAGGCTTGATGATTGGGTTTTGTGCCGAATATACAAGAAAAGCAACAGTAGCACCATGCCAAGGCCACTCTTAATGGATCAATATGATGATCAAACCTATAATAATATGCAACAAAACTCCAAACATTCATCTTCAAGAAGCACAAGTTATGGACTTGAAAATGATGACAATTTCTTCGATGGAATCTTTGCAAATGATCACGGAATGCAAAATGGTTGTGACACAAACTCAAAGGGTGGTAACAATAATAATGAATCATTATTCCCTATGAAACGTGCACTAAATGCATCATCACAGTTTTGGAATGAAACAGGGTCACCAGGGTCATCTTCTTCAAGCAAACGGTTTCATGGAGATCTTAATAGTGGAATAAGTAGCAATGCTGGGGAAAATAATTCATTTGTTTCACTGCTTAGCCAGCTTCCACCAAGCACAACTTTTCATCAAAATTCAATTCTTGGATCTGTTGGAGATGGTGTAATGAGGCAACAATTTCAACTTCCGGACATAAATTGGAACTAG
Protein sequence

>Msa0695990

MDSTDSSSCSPHPHLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEIDLYKFDPWELPSKASFGEQEWYFFSPRDRNTQMEQDPIGLLLLATGTDKPILTSDGNQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLITDYNHNSYNASSKTPPLPSDHPPNNNKKNSLRLDDWVLCRIYKKSNSSTMPRPLLMDQYDDQTYNNMQQNSKHSSSRSTSYGLENDDNFFDGIFANDHGMQNGCDTNSKGGNNNNESLFPMKRALNASSQFWNETGSPGSSSSSKRFHGDLNSGISSNAGENNSFVSLLSQLPPSTTFHQNSILGSVGDGVMRQQFQLPDINWN*