Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0697970 | XP_013457235.1 | 96.409 | 362 | 12 | 1 | 5 | 366 | 12 | 372 | 0.0 | 698 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0697970 | sp|Q4PT23|WTR6_ARATH | 41.284 | 327 | 188 | 3 | 19 | 343 | 1 | 325 | 1.51e-79 | 250 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0697970 | A0A072UPG7 | 96.409 | 362 | 12 | 1 | 5 | 366 | 12 | 372 | 0.0 | 698 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0614720 | Msa0697970 | 0.857084 | 2.076407e-62 | -8.615850e-47 |
Msa0639350 | Msa0697970 | 0.835962 | 1.235934e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0697970 | MtrunA17_Chr4g0050881 | 96.338 | 355 | 12 | 1 | 12 | 366 | 1 | 354 | 0.0 | 683 |
Msa0697970 | MtrunA17_Chr2g0278541 | 58.944 | 341 | 134 | 2 | 17 | 351 | 9 | 349 | 5.28e-144 | 413 |
Msa0697970 | MtrunA17_Chr2g0278551 | 58.559 | 333 | 136 | 2 | 17 | 348 | 9 | 340 | 9.92e-138 | 397 |
Msa0697970 | MtrunA17_Chr2g0290611 | 54.599 | 337 | 151 | 2 | 17 | 352 | 9 | 344 | 6.27e-129 | 374 |
Msa0697970 | MtrunA17_Chr4g0050891 | 53.416 | 322 | 147 | 2 | 17 | 335 | 10 | 331 | 1.51e-120 | 352 |
Msa0697970 | MtrunA17_Chr2g0278561 | 51.796 | 334 | 160 | 1 | 19 | 351 | 14 | 347 | 2.17e-119 | 351 |
Msa0697970 | MtrunA17_Chr4g0050941 | 50.135 | 371 | 170 | 4 | 1 | 365 | 1 | 362 | 4.30e-114 | 337 |
Msa0697970 | MtrunA17_Chr2g0332001 | 49.438 | 356 | 167 | 4 | 17 | 363 | 35 | 386 | 2.32e-110 | 328 |
Msa0697970 | MtrunA17_Chr4g0050931 | 47.904 | 334 | 130 | 4 | 19 | 347 | 11 | 305 | 7.89e-99 | 295 |
Msa0697970 | MtrunA17_Chr4g0051021 | 42.988 | 328 | 185 | 2 | 17 | 343 | 11 | 337 | 3.68e-91 | 278 |
Msa0697970 | MtrunA17_Chr4g0051001 | 42.904 | 303 | 172 | 1 | 17 | 318 | 28 | 330 | 4.28e-79 | 246 |
Msa0697970 | MtrunA17_Chr7g0255561 | 37.910 | 335 | 204 | 3 | 11 | 342 | 5 | 338 | 2.56e-76 | 240 |
Msa0697970 | MtrunA17_Chr7g0255581 | 37.910 | 335 | 204 | 3 | 11 | 342 | 5 | 338 | 2.56e-76 | 240 |
Msa0697970 | MtrunA17_Chr8g0354121 | 38.068 | 352 | 205 | 9 | 11 | 354 | 5 | 351 | 1.93e-73 | 233 |
Msa0697970 | MtrunA17_Chr3g0114691 | 35.475 | 358 | 219 | 4 | 10 | 363 | 10 | 359 | 1.63e-71 | 228 |
Msa0697970 | MtrunA17_Chr7g0271561 | 37.798 | 336 | 200 | 4 | 16 | 344 | 3 | 336 | 1.35e-70 | 225 |
Msa0697970 | MtrunA17_Chr3g0114731 | 35.777 | 341 | 213 | 2 | 20 | 359 | 18 | 353 | 8.97e-69 | 221 |
Msa0697970 | MtrunA17_Chr2g0278021 | 50.224 | 223 | 107 | 2 | 133 | 351 | 1 | 223 | 8.66e-68 | 215 |
Msa0697970 | MtrunA17_Chr3g0081421 | 36.842 | 342 | 209 | 6 | 15 | 352 | 13 | 351 | 1.09e-67 | 218 |
Msa0697970 | MtrunA17_Chr1g0160171 | 35.465 | 344 | 214 | 3 | 11 | 351 | 7 | 345 | 1.90e-67 | 217 |
Msa0697970 | MtrunA17_Chr3g0081511 | 36.607 | 336 | 206 | 5 | 20 | 352 | 17 | 348 | 1.56e-65 | 213 |
Msa0697970 | MtrunA17_Chr1g0160111 | 37.152 | 323 | 193 | 3 | 29 | 344 | 16 | 335 | 3.02e-65 | 211 |
Msa0697970 | MtrunA17_Chr2g0284261 | 33.238 | 349 | 215 | 5 | 20 | 362 | 8 | 344 | 7.38e-65 | 210 |
Msa0697970 | MtrunA17_Chr1g0164831 | 35.398 | 339 | 215 | 4 | 20 | 358 | 3 | 337 | 8.03e-65 | 209 |
Msa0697970 | MtrunA17_Chr3g0129571 | 35.015 | 337 | 207 | 4 | 17 | 344 | 4 | 337 | 1.05e-64 | 209 |
Msa0697970 | MtrunA17_Chr1g0186601 | 36.023 | 347 | 207 | 8 | 17 | 358 | 13 | 349 | 3.00e-63 | 205 |
Msa0697970 | MtrunA17_Chr3g0114711 | 33.590 | 390 | 212 | 7 | 17 | 365 | 11 | 394 | 2.67e-61 | 202 |
Msa0697970 | MtrunA17_Chr5g0441761 | 36.176 | 340 | 201 | 5 | 25 | 357 | 19 | 349 | 5.63e-61 | 199 |
Msa0697970 | MtrunA17_Chr1g0186571 | 35.821 | 335 | 204 | 6 | 17 | 348 | 10 | 336 | 5.76e-61 | 199 |
Msa0697970 | MtrunA17_Chr7g0263101 | 34.513 | 339 | 212 | 5 | 20 | 356 | 13 | 343 | 1.08e-60 | 199 |
Msa0697970 | MtrunA17_Chr3g0129591 | 35.593 | 354 | 209 | 7 | 18 | 361 | 3 | 347 | 5.18e-59 | 194 |
Msa0697970 | MtrunA17_Chr3g0114701 | 36.182 | 351 | 215 | 5 | 12 | 356 | 1 | 348 | 2.01e-58 | 194 |
Msa0697970 | MtrunA17_Chr1g0186611 | 34.571 | 350 | 208 | 9 | 17 | 358 | 13 | 349 | 2.09e-58 | 193 |
Msa0697970 | MtrunA17_Chr1g0182291 | 32.267 | 344 | 213 | 6 | 20 | 357 | 15 | 344 | 9.80e-58 | 191 |
Msa0697970 | MtrunA17_Chr3g0129601 | 34.650 | 329 | 213 | 2 | 17 | 343 | 26 | 354 | 3.32e-56 | 187 |
Msa0697970 | MtrunA17_Chr1g0186641 | 33.333 | 351 | 223 | 5 | 11 | 358 | 4 | 346 | 4.91e-55 | 184 |
Msa0697970 | MtrunA17_Chr1g0184221 | 31.198 | 359 | 224 | 4 | 17 | 359 | 13 | 364 | 7.28e-54 | 182 |
Msa0697970 | MtrunA17_Chr5g0428881 | 32.320 | 362 | 235 | 4 | 9 | 362 | 7 | 366 | 3.57e-53 | 180 |
Msa0697970 | MtrunA17_Chr1g0186561 | 35.588 | 340 | 199 | 8 | 17 | 348 | 13 | 340 | 5.77e-53 | 179 |
Msa0697970 | MtrunA17_Chr5g0413961 | 32.362 | 343 | 211 | 5 | 16 | 348 | 10 | 341 | 1.27e-52 | 178 |
Msa0697970 | MtrunA17_Chr1g0160181 | 34.561 | 353 | 220 | 5 | 20 | 366 | 18 | 365 | 1.30e-52 | 179 |
Msa0697970 | MtrunA17_Chr8g0334761 | 31.378 | 341 | 228 | 3 | 21 | 358 | 11 | 348 | 1.22e-51 | 176 |
Msa0697970 | MtrunA17_Chr6g0463971 | 33.929 | 336 | 208 | 5 | 20 | 346 | 16 | 346 | 2.75e-51 | 174 |
Msa0697970 | MtrunA17_Chr3g0129581 | 33.428 | 353 | 218 | 5 | 18 | 361 | 3 | 347 | 3.27e-51 | 174 |
Msa0697970 | MtrunA17_Chr4g0073241 | 31.285 | 358 | 223 | 7 | 21 | 365 | 9 | 356 | 3.78e-51 | 174 |
Msa0697970 | MtrunA17_Chr1g0171301 | 30.471 | 361 | 234 | 6 | 4 | 358 | 5 | 354 | 6.94e-51 | 173 |
Msa0697970 | MtrunA17_Chr2g0310441 | 30.659 | 349 | 223 | 4 | 21 | 356 | 11 | 353 | 9.82e-51 | 173 |
Msa0697970 | MtrunA17_Chr4g0059311 | 30.960 | 323 | 211 | 5 | 45 | 364 | 37 | 350 | 6.38e-50 | 171 |
Msa0697970 | MtrunA17_Chr8g0383731 | 32.286 | 350 | 221 | 6 | 20 | 358 | 5 | 349 | 1.55e-49 | 169 |
Msa0697970 | MtrunA17_Chr6g0483401 | 32.520 | 369 | 211 | 8 | 12 | 365 | 1 | 346 | 1.75e-49 | 170 |
Msa0697970 | MtrunA17_Chr3g0126101 | 33.143 | 350 | 209 | 7 | 21 | 364 | 7 | 337 | 1.06e-47 | 165 |
Msa0697970 | MtrunA17_Chr3g0142131 | 32.514 | 366 | 215 | 7 | 25 | 365 | 25 | 383 | 4.82e-47 | 164 |
Msa0697970 | MtrunA17_Chr8g0334771 | 31.519 | 349 | 223 | 4 | 21 | 361 | 11 | 351 | 1.26e-46 | 162 |
Msa0697970 | MtrunA17_Chr5g0413941 | 31.515 | 330 | 208 | 4 | 25 | 346 | 12 | 331 | 9.24e-46 | 160 |
Msa0697970 | MtrunA17_Chr3g0084091 | 35.055 | 271 | 161 | 4 | 100 | 361 | 11 | 275 | 5.38e-45 | 156 |
Msa0697970 | MtrunA17_Chr8g0334751 | 30.168 | 358 | 220 | 5 | 21 | 362 | 12 | 355 | 9.94e-44 | 154 |
Msa0697970 | MtrunA17_Chr5g0413951 | 31.611 | 329 | 201 | 4 | 25 | 342 | 12 | 327 | 1.21e-43 | 154 |
Msa0697970 | MtrunA17_Chr7g0227921 | 32.722 | 327 | 211 | 4 | 17 | 340 | 8 | 328 | 2.62e-43 | 154 |
Msa0697970 | MtrunA17_Chr6g0451211 | 31.054 | 351 | 222 | 6 | 21 | 364 | 13 | 350 | 1.91e-42 | 151 |
Msa0697970 | MtrunA17_Chr1g0150151 | 29.096 | 354 | 223 | 7 | 1 | 344 | 1 | 336 | 9.82e-42 | 149 |
Msa0697970 | MtrunA17_Chr5g0413921 | 31.707 | 328 | 210 | 4 | 25 | 346 | 12 | 331 | 1.23e-41 | 149 |
Msa0697970 | MtrunA17_Chr5g0429001 | 31.970 | 269 | 181 | 1 | 77 | 343 | 9 | 277 | 3.33e-41 | 147 |
Msa0697970 | MtrunA17_Chr1g0155761 | 29.894 | 378 | 237 | 7 | 14 | 366 | 15 | 389 | 4.57e-41 | 149 |
Msa0697970 | MtrunA17_Chr6g0451171 | 32.792 | 308 | 194 | 6 | 37 | 340 | 29 | 327 | 6.68e-38 | 139 |
Msa0697970 | MtrunA17_Chr5g0413931 | 30.887 | 327 | 216 | 5 | 24 | 346 | 10 | 330 | 1.24e-37 | 138 |
Msa0697970 | MtrunA17_Chr5g0407971 | 30.748 | 361 | 210 | 8 | 16 | 350 | 7 | 353 | 1.27e-37 | 139 |
Msa0697970 | MtrunA17_Chr6g0451251 | 32.258 | 310 | 192 | 5 | 38 | 340 | 30 | 328 | 1.82e-37 | 138 |
Msa0697970 | MtrunA17_Chr6g0451201 | 31.902 | 326 | 203 | 6 | 21 | 340 | 13 | 325 | 3.03e-37 | 137 |
Msa0697970 | MtrunA17_Chr1g0211801 | 29.297 | 256 | 164 | 3 | 20 | 268 | 11 | 256 | 4.04e-36 | 132 |
Msa0697970 | MtrunA17_Chr4g0050911 | 47.328 | 131 | 63 | 2 | 94 | 218 | 6 | 136 | 1.18e-33 | 122 |
Msa0697970 | MtrunA17_Chr6g0451261 | 28.664 | 307 | 213 | 3 | 17 | 321 | 8 | 310 | 1.25e-33 | 132 |
Msa0697970 | MtrunA17_Chr8g0369841 | 29.446 | 343 | 222 | 6 | 25 | 351 | 14 | 352 | 2.99e-33 | 127 |
Msa0697970 | MtrunA17_Chr4g0050921 | 54.455 | 101 | 46 | 0 | 218 | 318 | 1 | 101 | 4.81e-33 | 120 |
Msa0697970 | MtrunA17_Chr5g0408031 | 28.997 | 369 | 229 | 6 | 17 | 364 | 7 | 363 | 5.42e-32 | 124 |
Msa0697970 | MtrunA17_Chr2g0278031 | 50.435 | 115 | 56 | 1 | 19 | 132 | 13 | 127 | 6.42e-32 | 117 |
Msa0697970 | MtrunA17_Chr5g0408041 | 28.804 | 368 | 229 | 6 | 19 | 365 | 10 | 365 | 9.98e-32 | 123 |
Msa0697970 | MtrunA17_Chr3g0126091 | 27.606 | 355 | 235 | 7 | 21 | 365 | 12 | 354 | 1.45e-31 | 122 |
Msa0697970 | MtrunA17_Chr5g0407991 | 29.348 | 368 | 223 | 9 | 20 | 365 | 9 | 361 | 6.50e-31 | 121 |
Msa0697970 | MtrunA17_Chr1g0177221 | 32.806 | 253 | 160 | 4 | 20 | 268 | 18 | 264 | 2.06e-30 | 117 |
Msa0697970 | MtrunA17_Chr5g0408001 | 28.571 | 350 | 225 | 8 | 12 | 342 | 1 | 344 | 6.57e-29 | 115 |
Msa0697970 | MtrunA17_Chr5g0404811 | 31.193 | 218 | 143 | 3 | 133 | 347 | 7 | 220 | 1.36e-27 | 108 |
Msa0697970 | MtrunA17_Chr4g0056081 | 27.684 | 354 | 213 | 11 | 25 | 353 | 19 | 354 | 1.57e-27 | 111 |
Msa0697970 | MtrunA17_Chr6g0451191 | 29.245 | 212 | 136 | 4 | 133 | 340 | 1 | 202 | 8.68e-27 | 106 |
Msa0697970 | MtrunA17_Chr8g0334711 | 33.990 | 203 | 116 | 4 | 21 | 215 | 11 | 203 | 1.09e-26 | 105 |
Msa0697970 | MtrunA17_Chr5g0399281 | 26.000 | 350 | 235 | 7 | 25 | 364 | 13 | 348 | 1.19e-26 | 108 |
Msa0697970 | MtrunA17_Chr8g0334721 | 31.618 | 136 | 92 | 1 | 232 | 366 | 1 | 136 | 1.70e-21 | 90.1 |
Msa0697970 | MtrunA17_Chr1g0182261 | 37.107 | 159 | 89 | 7 | 209 | 360 | 76 | 230 | 2.03e-18 | 83.2 |
Msa0697970 | MtrunA17_Chr1g0172891 | 38.298 | 94 | 48 | 2 | 275 | 366 | 13 | 98 | 1.19e-15 | 72.4 |
Msa0697970 | MtrunA17_Chr1g0177231 | 42.667 | 75 | 43 | 0 | 268 | 342 | 28 | 102 | 2.29e-15 | 72.0 |
Msa0697970 | MtrunA17_Chr4g0050901 | 60.000 | 65 | 23 | 1 | 12 | 73 | 1 | 65 | 2.05e-14 | 67.4 |
Msa0697970 | MtrunA17_Chr8g0334731 | 29.717 | 212 | 121 | 6 | 21 | 230 | 12 | 197 | 3.71e-14 | 70.5 |
Msa0697970 | MtrunA17_Chr1g0211811 | 37.838 | 74 | 46 | 0 | 272 | 345 | 3 | 76 | 1.35e-13 | 65.9 |
Msa0697970 | MtrunA17_Chr6g0451241 | 42.254 | 71 | 41 | 0 | 270 | 340 | 9 | 79 | 2.74e-11 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0697970 | AT1G25270.1 | 41.284 | 327 | 188 | 3 | 19 | 343 | 1 | 325 | 1.54e-80 | 250 |
Msa0697970 | AT1G68170.2 | 41.018 | 334 | 196 | 1 | 11 | 343 | 3 | 336 | 2.43e-75 | 237 |
Msa0697970 | AT1G68170.1 | 41.718 | 326 | 189 | 1 | 19 | 343 | 1 | 326 | 4.03e-75 | 236 |
Msa0697970 | AT4G08290.1 | 37.615 | 327 | 202 | 2 | 17 | 342 | 9 | 334 | 4.51e-72 | 229 |
Msa0697970 | AT1G44800.1 | 37.500 | 352 | 208 | 5 | 10 | 358 | 1 | 343 | 3.76e-69 | 221 |
Msa0697970 | AT5G07050.1 | 35.977 | 353 | 216 | 5 | 17 | 359 | 14 | 366 | 4.31e-68 | 220 |
Msa0697970 | AT2G37460.1 | 34.384 | 349 | 214 | 5 | 20 | 365 | 14 | 350 | 1.28e-67 | 218 |
Msa0697970 | AT1G09380.1 | 36.728 | 324 | 193 | 3 | 21 | 337 | 8 | 326 | 9.87e-67 | 215 |
Msa0697970 | AT1G21890.1 | 35.097 | 359 | 214 | 4 | 17 | 366 | 7 | 355 | 1.33e-65 | 213 |
Msa0697970 | AT4G08300.1 | 35.503 | 338 | 216 | 2 | 10 | 346 | 1 | 337 | 2.22e-65 | 212 |
Msa0697970 | AT5G13670.1 | 35.821 | 335 | 206 | 7 | 20 | 350 | 7 | 336 | 3.32e-64 | 209 |
Msa0697970 | AT3G30340.1 | 34.226 | 336 | 208 | 3 | 20 | 349 | 10 | 338 | 2.04e-61 | 201 |
Msa0697970 | AT2G39510.1 | 34.943 | 352 | 210 | 8 | 20 | 366 | 7 | 344 | 1.02e-60 | 200 |
Msa0697970 | AT4G30420.2 | 33.424 | 368 | 216 | 6 | 20 | 365 | 8 | 368 | 2.52e-59 | 196 |
Msa0697970 | AT1G01070.1 | 33.138 | 341 | 220 | 4 | 21 | 359 | 16 | 350 | 9.26e-58 | 192 |
Msa0697970 | AT4G30420.1 | 33.333 | 363 | 213 | 6 | 25 | 365 | 3 | 358 | 2.22e-57 | 191 |
Msa0697970 | AT4G01440.1 | 32.440 | 336 | 223 | 2 | 12 | 346 | 1 | 333 | 7.92e-56 | 187 |
Msa0697970 | AT5G64700.1 | 34.393 | 346 | 213 | 5 | 17 | 357 | 4 | 340 | 9.44e-56 | 186 |
Msa0697970 | AT2G40900.1 | 33.531 | 337 | 208 | 6 | 15 | 344 | 5 | 332 | 1.91e-55 | 187 |
Msa0697970 | AT1G21890.2 | 35.256 | 312 | 195 | 2 | 17 | 321 | 7 | 318 | 1.08e-53 | 181 |
Msa0697970 | AT1G11450.3 | 31.672 | 341 | 225 | 4 | 21 | 358 | 16 | 351 | 1.20e-53 | 181 |
Msa0697970 | AT3G56620.1 | 32.110 | 327 | 210 | 3 | 14 | 337 | 4 | 321 | 3.86e-53 | 180 |
Msa0697970 | AT1G43650.1 | 33.721 | 344 | 211 | 5 | 20 | 356 | 6 | 339 | 8.73e-52 | 176 |
Msa0697970 | AT4G01430.1 | 32.132 | 333 | 214 | 7 | 21 | 346 | 9 | 336 | 7.95e-51 | 174 |
Msa0697970 | AT3G53210.1 | 31.921 | 354 | 232 | 3 | 12 | 358 | 1 | 352 | 9.53e-51 | 174 |
Msa0697970 | AT4G01440.3 | 32.143 | 308 | 205 | 2 | 12 | 318 | 1 | 305 | 8.73e-50 | 170 |
Msa0697970 | AT2G37450.2 | 32.000 | 350 | 199 | 6 | 12 | 356 | 1 | 316 | 1.55e-49 | 169 |
Msa0697970 | AT1G11450.5 | 32.051 | 312 | 204 | 4 | 50 | 358 | 1 | 307 | 2.37e-49 | 168 |
Msa0697970 | AT3G18200.2 | 31.111 | 360 | 219 | 12 | 11 | 359 | 23 | 364 | 2.71e-49 | 170 |
Msa0697970 | AT1G11460.1 | 32.407 | 324 | 214 | 4 | 21 | 342 | 16 | 336 | 7.13e-49 | 168 |
Msa0697970 | AT1G01070.2 | 32.026 | 306 | 201 | 3 | 55 | 359 | 4 | 303 | 4.80e-47 | 162 |
Msa0697970 | AT4G01450.2 | 33.939 | 330 | 210 | 3 | 12 | 340 | 1 | 323 | 6.59e-47 | 163 |
Msa0697970 | AT5G40240.1 | 31.498 | 327 | 221 | 2 | 16 | 340 | 15 | 340 | 1.67e-46 | 162 |
Msa0697970 | AT5G40240.3 | 31.498 | 327 | 221 | 2 | 16 | 340 | 15 | 340 | 1.67e-46 | 162 |
Msa0697970 | AT5G40240.2 | 31.988 | 322 | 216 | 2 | 21 | 340 | 34 | 354 | 2.88e-46 | 162 |
Msa0697970 | AT4G01450.1 | 33.442 | 308 | 197 | 3 | 12 | 318 | 1 | 301 | 3.65e-46 | 161 |
Msa0697970 | AT4G08290.2 | 35.662 | 272 | 169 | 3 | 17 | 287 | 9 | 275 | 6.77e-46 | 159 |
Msa0697970 | AT4G28040.1 | 30.137 | 365 | 222 | 6 | 20 | 366 | 7 | 356 | 1.09e-45 | 160 |
Msa0697970 | AT4G28040.5 | 30.137 | 365 | 222 | 6 | 20 | 366 | 7 | 356 | 1.09e-45 | 160 |
Msa0697970 | AT4G28040.3 | 30.137 | 365 | 222 | 6 | 20 | 366 | 7 | 356 | 1.09e-45 | 160 |
Msa0697970 | AT4G28040.4 | 30.137 | 365 | 222 | 6 | 20 | 366 | 7 | 356 | 1.09e-45 | 160 |
Msa0697970 | AT4G28040.2 | 30.137 | 365 | 222 | 6 | 20 | 366 | 7 | 356 | 1.09e-45 | 160 |
Msa0697970 | AT1G11450.2 | 31.475 | 305 | 201 | 4 | 57 | 358 | 1 | 300 | 1.26e-45 | 158 |
Msa0697970 | AT3G53210.2 | 33.457 | 269 | 171 | 2 | 96 | 358 | 29 | 295 | 1.88e-43 | 153 |
Msa0697970 | AT5G40230.1 | 30.571 | 350 | 227 | 6 | 21 | 358 | 21 | 366 | 2.91e-42 | 151 |
Msa0697970 | AT1G75500.1 | 31.157 | 337 | 215 | 8 | 17 | 342 | 16 | 346 | 5.67e-42 | 151 |
Msa0697970 | AT1G75500.2 | 31.157 | 337 | 215 | 8 | 17 | 342 | 16 | 346 | 5.67e-42 | 151 |
Msa0697970 | AT1G11450.4 | 30.897 | 301 | 200 | 4 | 21 | 318 | 16 | 311 | 8.29e-42 | 149 |
Msa0697970 | AT1G70260.1 | 28.610 | 374 | 227 | 10 | 17 | 364 | 8 | 367 | 4.56e-41 | 148 |
Msa0697970 | AT3G30340.2 | 35.294 | 255 | 152 | 3 | 20 | 268 | 10 | 257 | 5.34e-41 | 145 |
Msa0697970 | AT4G01450.4 | 34.109 | 258 | 162 | 3 | 12 | 268 | 1 | 251 | 1.99e-40 | 144 |
Msa0697970 | AT4G01430.2 | 30.820 | 305 | 199 | 7 | 21 | 318 | 9 | 308 | 3.67e-40 | 144 |
Msa0697970 | AT2G37450.3 | 33.465 | 254 | 151 | 4 | 108 | 356 | 4 | 244 | 1.06e-39 | 142 |
Msa0697970 | AT5G40210.1 | 33.437 | 323 | 187 | 9 | 36 | 351 | 28 | 329 | 1.81e-39 | 143 |
Msa0697970 | AT4G01440.5 | 32.456 | 228 | 151 | 1 | 119 | 346 | 1 | 225 | 2.83e-39 | 140 |
Msa0697970 | AT4G01440.2 | 32.456 | 228 | 151 | 1 | 119 | 346 | 1 | 225 | 2.83e-39 | 140 |
Msa0697970 | AT3G28050.1 | 29.787 | 329 | 211 | 6 | 36 | 361 | 27 | 338 | 6.55e-39 | 142 |
Msa0697970 | AT4G01440.4 | 32.558 | 258 | 170 | 2 | 12 | 268 | 1 | 255 | 1.71e-38 | 139 |
Msa0697970 | AT5G45370.1 | 31.024 | 332 | 193 | 5 | 25 | 344 | 24 | 331 | 2.23e-38 | 140 |
Msa0697970 | AT4G15540.1 | 32.727 | 330 | 190 | 6 | 21 | 340 | 17 | 324 | 3.68e-38 | 140 |
Msa0697970 | AT4G15540.2 | 32.727 | 330 | 190 | 6 | 21 | 340 | 17 | 324 | 3.68e-38 | 140 |
Msa0697970 | AT3G18200.1 | 32.618 | 233 | 144 | 5 | 118 | 346 | 3 | 226 | 4.01e-38 | 137 |
Msa0697970 | AT1G11450.1 | 31.518 | 257 | 169 | 3 | 104 | 358 | 8 | 259 | 6.30e-38 | 137 |
Msa0697970 | AT5G45370.2 | 30.564 | 337 | 208 | 4 | 25 | 342 | 24 | 353 | 7.66e-38 | 140 |
Msa0697970 | AT5G45370.4 | 30.564 | 337 | 208 | 4 | 25 | 342 | 24 | 353 | 7.66e-38 | 140 |
Msa0697970 | AT3G45870.1 | 31.402 | 328 | 209 | 5 | 20 | 335 | 11 | 334 | 3.81e-36 | 135 |
Msa0697970 | AT3G28070.2 | 32.941 | 255 | 160 | 6 | 102 | 351 | 7 | 255 | 1.02e-35 | 131 |
Msa0697970 | AT3G28070.1 | 32.453 | 265 | 168 | 6 | 92 | 351 | 89 | 347 | 5.61e-35 | 132 |
Msa0697970 | AT4G01450.3 | 34.361 | 227 | 141 | 3 | 12 | 237 | 1 | 220 | 2.74e-33 | 124 |
Msa0697970 | AT3G28100.1 | 30.284 | 317 | 211 | 6 | 36 | 347 | 29 | 340 | 3.90e-33 | 127 |
Msa0697970 | AT5G64700.2 | 32.422 | 256 | 168 | 4 | 17 | 267 | 4 | 259 | 2.52e-32 | 122 |
Msa0697970 | AT1G60050.1 | 26.542 | 373 | 243 | 8 | 12 | 364 | 4 | 365 | 6.94e-32 | 124 |
Msa0697970 | AT3G28130.5 | 30.252 | 238 | 163 | 3 | 108 | 344 | 15 | 250 | 1.93e-31 | 120 |
Msa0697970 | AT3G28130.1 | 30.252 | 238 | 163 | 3 | 108 | 344 | 15 | 250 | 1.93e-31 | 120 |
Msa0697970 | AT3G53210.3 | 31.707 | 246 | 165 | 2 | 12 | 256 | 1 | 244 | 4.67e-31 | 119 |
Msa0697970 | AT3G28080.5 | 32.500 | 240 | 154 | 5 | 108 | 344 | 13 | 247 | 6.38e-31 | 119 |
Msa0697970 | AT3G28080.7 | 32.500 | 240 | 154 | 5 | 108 | 344 | 13 | 247 | 6.38e-31 | 119 |
Msa0697970 | AT3G28080.8 | 32.500 | 240 | 154 | 5 | 108 | 344 | 13 | 247 | 6.38e-31 | 119 |
Msa0697970 | AT3G28080.6 | 32.500 | 240 | 154 | 5 | 108 | 344 | 13 | 247 | 6.38e-31 | 119 |
Msa0697970 | AT3G28130.2 | 30.252 | 238 | 163 | 3 | 108 | 344 | 101 | 336 | 1.09e-30 | 120 |
Msa0697970 | AT3G28080.2 | 32.500 | 240 | 154 | 5 | 108 | 344 | 94 | 328 | 2.88e-30 | 119 |
Msa0697970 | AT3G28080.1 | 32.500 | 240 | 154 | 5 | 108 | 344 | 102 | 336 | 3.41e-30 | 119 |
Msa0697970 | AT2G37450.1 | 31.441 | 229 | 139 | 4 | 133 | 356 | 62 | 277 | 5.55e-30 | 117 |
Msa0697970 | AT5G45370.6 | 30.888 | 259 | 154 | 3 | 104 | 344 | 2 | 253 | 6.23e-30 | 116 |
Msa0697970 | AT5G45370.5 | 30.888 | 259 | 154 | 3 | 104 | 344 | 2 | 253 | 6.23e-30 | 116 |
Msa0697970 | AT4G19185.1 | 30.383 | 339 | 214 | 7 | 25 | 346 | 25 | 358 | 1.69e-29 | 117 |
Msa0697970 | AT5G47470.1 | 28.161 | 348 | 226 | 8 | 25 | 365 | 34 | 364 | 1.87e-28 | 114 |
Msa0697970 | AT4G16620.1 | 30.421 | 309 | 195 | 8 | 59 | 359 | 49 | 345 | 1.91e-28 | 114 |
Msa0697970 | AT5G47470.2 | 28.161 | 348 | 226 | 8 | 25 | 365 | 62 | 392 | 3.16e-28 | 114 |
Msa0697970 | AT3G45870.8 | 29.260 | 311 | 204 | 5 | 20 | 318 | 11 | 317 | 5.43e-28 | 112 |
Msa0697970 | AT4G01430.3 | 31.863 | 204 | 129 | 5 | 148 | 346 | 1 | 199 | 9.08e-28 | 109 |
Msa0697970 | AT1G43650.2 | 32.411 | 253 | 156 | 4 | 20 | 267 | 6 | 248 | 9.66e-28 | 110 |
Msa0697970 | AT4G24980.1 | 27.974 | 311 | 147 | 9 | 36 | 341 | 2 | 240 | 4.13e-27 | 108 |
Msa0697970 | AT3G28070.5 | 31.390 | 223 | 142 | 6 | 134 | 351 | 2 | 218 | 7.91e-27 | 107 |
Msa0697970 | AT4G19185.2 | 31.298 | 262 | 165 | 5 | 98 | 346 | 21 | 280 | 1.15e-26 | 108 |
Msa0697970 | AT5G47470.3 | 27.964 | 329 | 218 | 7 | 25 | 346 | 62 | 378 | 1.42e-26 | 109 |
Msa0697970 | AT3G28070.3 | 31.897 | 232 | 147 | 6 | 92 | 318 | 89 | 314 | 3.06e-24 | 101 |
Msa0697970 | AT4G16620.4 | 29.572 | 257 | 164 | 5 | 108 | 359 | 4 | 248 | 5.32e-24 | 100 |
Msa0697970 | AT4G16620.2 | 29.572 | 257 | 164 | 5 | 108 | 359 | 4 | 248 | 5.32e-24 | 100 |
Msa0697970 | AT3G45870.5 | 31.905 | 210 | 134 | 2 | 134 | 335 | 51 | 259 | 1.45e-23 | 99.8 |
Msa0697970 | AT5G45370.3 | 29.515 | 227 | 135 | 3 | 134 | 342 | 74 | 293 | 1.89e-23 | 99.8 |
Msa0697970 | AT3G28130.3 | 28.302 | 212 | 149 | 3 | 134 | 344 | 2 | 211 | 3.56e-23 | 97.1 |
Msa0697970 | AT3G28080.9 | 30.374 | 214 | 141 | 5 | 134 | 344 | 2 | 210 | 1.85e-22 | 95.1 |
Msa0697970 | AT3G45870.9 | 29.719 | 249 | 160 | 4 | 20 | 256 | 11 | 256 | 1.44e-20 | 90.9 |
Msa0697970 | AT3G45870.2 | 35.000 | 140 | 90 | 1 | 196 | 335 | 45 | 183 | 2.36e-18 | 83.6 |
Msa0697970 | AT3G28080.3 | 27.500 | 240 | 115 | 4 | 108 | 345 | 102 | 284 | 1.69e-17 | 82.4 |
Msa0697970 | AT3G45870.6 | 28.497 | 193 | 129 | 2 | 134 | 318 | 51 | 242 | 8.29e-16 | 76.6 |
Msa0697970 | AT3G45870.7 | 28.497 | 193 | 129 | 2 | 134 | 318 | 51 | 242 | 8.29e-16 | 76.6 |
Msa0697970 | AT3G28100.3 | 28.390 | 236 | 160 | 5 | 36 | 266 | 29 | 260 | 3.99e-13 | 69.3 |
Msa0697970 | AT4G16620.3 | 28.934 | 197 | 132 | 5 | 59 | 252 | 49 | 240 | 7.11e-13 | 68.6 |
Msa0697970 | AT3G28080.4 | 32.530 | 83 | 55 | 1 | 263 | 345 | 114 | 195 | 3.93e-11 | 62.8 |
Find 118 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCATACTTCCCTTCCTTAA+TGG | 0.146793 | 4_4:-68065279 | Msa0697970:exon |
TTGTCTTGGCCGTGTCTTTC+GGG | 0.189585 | 4_4:-68064540 | Msa0697970:intron |
CCTCCTATATATAAAGTAAT+TGG | 0.215182 | 4_4:+68067311 | None:intergenic |
AAGGAGTAGAATTTGATATT+TGG | 0.219912 | 4_4:-68064317 | Msa0697970:CDS |
CGTTCCGTGTGGTCGTTCTT+TGG | 0.231574 | 4_4:+68064270 | None:intergenic |
CTCAATCTGGCTCATCATTC+AGG | 0.236067 | 4_4:-68064184 | Msa0697970:intron |
GTTGCTTCTGTTTCTCAATC+TGG | 0.266172 | 4_4:-68064197 | Msa0697970:CDS |
GGAAGCTTGGTTGGGATATC+AGG | 0.284815 | 4_4:-68063960 | Msa0697970:CDS |
GCAATAGACCCCAGCCATTA+AGG | 0.287649 | 4_4:+68065265 | None:intergenic |
TTCCTTGCTAATTGATTTGT+TGG | 0.304642 | 4_4:+68067348 | None:intergenic |
TTTGTCTTGGCCGTGTCTTT+CGG | 0.313966 | 4_4:-68064541 | Msa0697970:CDS |
TACTTCCCTTCCTTAATGGC+TGG | 0.316974 | 4_4:-68065275 | Msa0697970:exon |
CAAAAGTGACGGAGGGAATA+AGG | 0.317897 | 4_4:+68064560 | None:intergenic |
TAGTATATAGATCTCTAAAA+TGG | 0.321010 | 4_4:+68063076 | None:intergenic |
GGAACTATACTTGGATTTGC+TGG | 0.338162 | 4_4:-68064363 | Msa0697970:CDS |
TATATACTATTCAATGTATA+TGG | 0.341538 | 4_4:-68063062 | Msa0697970:three_prime_UTR |
GTAGTTTCGAGGAATTAAAT+TGG | 0.346894 | 4_4:-68064416 | Msa0697970:intron |
GATACTCATTCCATCATATA+TGG | 0.347161 | 4_4:+68065136 | None:intergenic |
AATCCAATTACTTTATATAT+AGG | 0.347980 | 4_4:-68067314 | Msa0697970:five_prime_UTR |
CAACAATGGCCTTGCAGCTT+CGG | 0.348823 | 4_4:+68063316 | None:intergenic |
GCTACAATCAAAAGCATTAG+AGG | 0.354140 | 4_4:+68063716 | None:intergenic |
ATAGCTTTGATGTCTGTAAT+AGG | 0.358630 | 4_4:-68064036 | Msa0697970:CDS |
GCCGGACCCAATCCACTTAC+TGG | 0.369061 | 4_4:-68067139 | Msa0697970:intron |
CTTGAAACCAGCCTTGCTAA+TGG | 0.382121 | 4_4:-68065207 | Msa0697970:CDS |
GCCATTAAGGAAGGGAAGTA+TGG | 0.382507 | 4_4:+68065278 | None:intergenic |
ACTTCCCTTCCTTAATGGCT+GGG | 0.392567 | 4_4:-68065274 | Msa0697970:exon |
CATTAGCAAGGCTGGTTTCA+AGG | 0.401211 | 4_4:+68065208 | None:intergenic |
TTGTGTGTGTATAGTATACT+AGG | 0.405190 | 4_4:-68063443 | Msa0697970:intron |
TGGCCTATACTCGGTGCTAT+GGG | 0.408293 | 4_4:-68063402 | Msa0697970:CDS |
ACTTGGATTTGCTGGGGCAT+TGG | 0.417474 | 4_4:-68064355 | Msa0697970:CDS |
GGAGGAGTGTTGATTGTTTG+TGG | 0.420620 | 4_4:-68063422 | Msa0697970:CDS |
TTGAAAGCAGACGCATATAA+AGG | 0.425809 | 4_4:+68063740 | None:intergenic |
AACCAGCCTTGCTAATGGTT+GGG | 0.425888 | 4_4:-68065202 | Msa0697970:CDS |
TATAATATAACAACTTCAAA+TGG | 0.428365 | 4_4:+68063184 | None:intergenic |
GTGGCCTATACTCGGTGCTA+TGG | 0.435616 | 4_4:-68063403 | Msa0697970:CDS |
GATGCTACCACTGAATTGTT+AGG | 0.445239 | 4_4:-68064240 | Msa0697970:CDS |
ACCCCAACCATTAGCAAGGC+TGG | 0.447222 | 4_4:+68065200 | None:intergenic |
ATTAAATTGGCGAGCAGTAA+CGG | 0.448622 | 4_4:-68064403 | Msa0697970:CDS |
AAACAAGAGCTCCGTAGAAT+AGG | 0.449858 | 4_4:+68064617 | None:intergenic |
GTGTTTGTCCTTAGTACCTC+TGG | 0.450626 | 4_4:+68067241 | None:intergenic |
TGAACCAGTGGAAGCTTGGT+TGG | 0.454016 | 4_4:-68063969 | Msa0697970:CDS |
TCCAAAAGATTGATTGCAAA+AGG | 0.456878 | 4_4:+68064294 | None:intergenic |
AACACTCTCCAAGTCATCTT+CGG | 0.457047 | 4_4:+68064803 | None:intergenic |
TTAAATTGGCGAGCAGTAAC+GGG | 0.459220 | 4_4:-68064402 | Msa0697970:CDS |
GAACCAGTGGAAGCTTGGTT+GGG | 0.459485 | 4_4:-68063968 | Msa0697970:CDS |
CAATGTTACGTACCAGTAAG+TGG | 0.462105 | 4_4:+68067127 | None:intergenic |
TATATATAAAGTAATTGGAT+TGG | 0.466563 | 4_4:+68067316 | None:intergenic |
TTGCAGTCTGATCTTGAAGA+TGG | 0.475617 | 4_4:-68065246 | Msa0697970:CDS |
TACAAGCTTGCCATATATGA+TGG | 0.476535 | 4_4:-68065146 | Msa0697970:CDS |
ACCAGTAAGTGGATTGGGTC+CGG | 0.482110 | 4_4:+68067138 | None:intergenic |
ATATATAAAGTAATTGGATT+GGG | 0.482820 | 4_4:+68067317 | None:intergenic |
GATTTGAACCAGTGGAAGCT+TGG | 0.483175 | 4_4:-68063973 | Msa0697970:CDS |
AAACCAGCCTTGCTAATGGT+TGG | 0.486693 | 4_4:-68065203 | Msa0697970:CDS |
ACAAAGCACCAGAGGTACTA+AGG | 0.487378 | 4_4:-68067249 | Msa0697970:five_prime_UTR |
TACTCGGTGCTATGGGGTAA+AGG | 0.487794 | 4_4:-68063395 | Msa0697970:CDS |
AAGGTTGTAGGAACTATACT+TGG | 0.488678 | 4_4:-68064372 | Msa0697970:CDS |
GAACTATACTTGGATTTGCT+GGG | 0.489267 | 4_4:-68064362 | Msa0697970:CDS |
TGGAATAATGATTCTTGTCA+TGG | 0.496034 | 4_4:-68063786 | Msa0697970:CDS |
TACGTACCAGTAAGTGGATT+GGG | 0.496939 | 4_4:+68067133 | None:intergenic |
TTATTTCAAAACCTATTCTA+CGG | 0.499151 | 4_4:-68064628 | Msa0697970:CDS |
TGATCGTCTATGTAGTTTCG+AGG | 0.500886 | 4_4:-68064427 | Msa0697970:intron |
CTTCCCTTCCTTAATGGCTG+GGG | 0.501081 | 4_4:-68065273 | Msa0697970:exon |
ACGGGAAAGGCAAAGGTTGT+AGG | 0.503442 | 4_4:-68064384 | Msa0697970:CDS |
ATTCGTCGCATCCATGCTCT+TGG | 0.505539 | 4_4:-68063693 | Msa0697970:CDS |
GGAAGAGACCGAAGATGACT+TGG | 0.506957 | 4_4:-68064811 | Msa0697970:CDS |
GGATTGGGTCCGGCTCTTCG+AGG | 0.509683 | 4_4:+68067148 | None:intergenic |
TAATGATTCTTGTCATGGCA+TGG | 0.509769 | 4_4:-68063781 | Msa0697970:CDS |
AGTCATGCGTACATAATAGC+TGG | 0.511139 | 4_4:+68063149 | None:intergenic |
AATAAGAGCAAGAGGAATAG+TGG | 0.511175 | 4_4:+68065073 | None:intergenic |
ATCAAAGCTATGCTTGATTG+AGG | 0.515025 | 4_4:+68064048 | None:intergenic |
GATTGTTTGTGGCCTATACT+CGG | 0.520583 | 4_4:-68063411 | Msa0697970:CDS |
TTACAGCCCTCAGAAATCAT+TGG | 0.522947 | 4_4:-68063347 | Msa0697970:CDS |
TATATAATATATACCTTCCG+AGG | 0.524794 | 4_4:+68063657 | None:intergenic |
TTACGTACCAGTAAGTGGAT+TGG | 0.525505 | 4_4:+68067132 | None:intergenic |
ATAGCAACTCCTCGAAGAGC+CGG | 0.527327 | 4_4:-68067157 | Msa0697970:five_prime_UTR |
TACCCCATAGCACCGAGTAT+AGG | 0.533297 | 4_4:+68063399 | None:intergenic |
CCAATTACTTTATATATAGG+AGG | 0.537002 | 4_4:-68067311 | Msa0697970:five_prime_UTR |
GCTATGCTTGATTGAGGGCA+TGG | 0.539116 | 4_4:+68064054 | None:intergenic |
ACCAGCCTTGCTAATGGTTG+GGG | 0.550467 | 4_4:-68065201 | Msa0697970:CDS |
CTTTCGAAAATAAGAGCAAG+AGG | 0.553483 | 4_4:+68065065 | None:intergenic |
GCATGGGTCGTACAGAAGAA+AGG | 0.553756 | 4_4:-68063764 | Msa0697970:CDS |
TCAAAGCTATGCTTGATTGA+GGG | 0.556100 | 4_4:+68064049 | None:intergenic |
TGCAGTCTGATCTTGAAGAT+GGG | 0.567743 | 4_4:-68065245 | Msa0697970:CDS |
GTTGAGTCCATGAGCATCGA+TGG | 0.569176 | 4_4:-68063297 | Msa0697970:exon |
TATCCCAACCAAGCTTCCAC+TGG | 0.569343 | 4_4:+68063965 | None:intergenic |
AATGATTCTTGTCATGGCAT+GGG | 0.571068 | 4_4:-68063780 | Msa0697970:CDS |
TAACTTCTCATCCAAGAGCA+TGG | 0.575858 | 4_4:+68063682 | None:intergenic |
TAGACCCCAGCCATTAAGGA+AGG | 0.576214 | 4_4:+68065269 | None:intergenic |
ATCATCACCAATGATTTCTG+AGG | 0.576653 | 4_4:+68063340 | None:intergenic |
ATAATCCACTTAGAAGTGAA+AGG | 0.580234 | 4_4:+68064777 | None:intergenic |
CGCTGCAAAGGCGAGACGAT+AGG | 0.583202 | 4_4:+68065100 | None:intergenic |
TAAATGACCATCGATGCTCA+TGG | 0.585557 | 4_4:+68063290 | None:intergenic |
AATAGTGGTAACCGCTGCAA+AGG | 0.587272 | 4_4:+68065088 | None:intergenic |
TTGGCGAGCAGTAACGGGAA+AGG | 0.593835 | 4_4:-68064397 | Msa0697970:CDS |
AGCAGTAACGGGAAAGGCAA+AGG | 0.594780 | 4_4:-68064391 | Msa0697970:CDS |
AACTATACTTGGATTTGCTG+GGG | 0.597676 | 4_4:-68064361 | Msa0697970:CDS |
ATGAGAAGTTAAACCTCGGA+AGG | 0.598102 | 4_4:-68063670 | Msa0697970:intron |
ACTAAGGACAAACACACGCC+AGG | 0.599963 | 4_4:-68067233 | Msa0697970:five_prime_UTR |
CTATCGTCTCGCCTTTGCAG+CGG | 0.608374 | 4_4:-68065099 | Msa0697970:CDS |
CACGGCCAAGACAAAAGTGA+CGG | 0.610470 | 4_4:+68064549 | None:intergenic |
TTGCACCCCAACCATTAGCA+AGG | 0.612822 | 4_4:+68065196 | None:intergenic |
TGCCAACAAATCAATTAGCA+AGG | 0.616435 | 4_4:-68067350 | Msa0697970:five_prime_UTR |
GTGATGATTCCGAAGCTGCA+AGG | 0.619485 | 4_4:-68063325 | Msa0697970:CDS |
GATGCTCATGGACTCAACAA+TGG | 0.622052 | 4_4:+68063302 | None:intergenic |
GCCAAGACAAAAGTGACGGA+GGG | 0.626370 | 4_4:+68064553 | None:intergenic |
GGCCAAGACAAAAGTGACGG+AGG | 0.627973 | 4_4:+68064552 | None:intergenic |
TCATCACCAATGATTTCTGA+GGG | 0.628675 | 4_4:+68063341 | None:intergenic |
TTGAGAGGGATTTGAACCAG+TGG | 0.633369 | 4_4:-68063981 | Msa0697970:CDS |
GGCCTATACTCGGTGCTATG+GGG | 0.636037 | 4_4:-68063401 | Msa0697970:CDS |
ACTCTCACTCTTACTACACA+TGG | 0.641908 | 4_4:-68063129 | Msa0697970:three_prime_UTR |
CAGTAAACACAAAGCACCAG+AGG | 0.643966 | 4_4:-68067257 | Msa0697970:five_prime_UTR |
AGACCCCAGCCATTAAGGAA+GGG | 0.648693 | 4_4:+68065270 | None:intergenic |
TAGAACACCTAACAATTCAG+TGG | 0.656150 | 4_4:+68064233 | None:intergenic |
GGATCCAAAGAACGACCACA+CGG | 0.660238 | 4_4:-68064274 | Msa0697970:CDS |
TTGGATGAGAAGTTAAACCT+CGG | 0.681264 | 4_4:-68063674 | Msa0697970:CDS |
TTAAACATACCCGAAAGACA+CGG | 0.692447 | 4_4:+68064531 | None:intergenic |
TGTGTGTATAGTATACTAGG+AGG | 0.696059 | 4_4:-68063440 | Msa0697970:intron |
CATCAGTGACACGTTCCGTG+TGG | 0.704527 | 4_4:+68064259 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GTTATTTTTAAAATAAATTG+TGG | + | chr4_4:68064178-68064197 | None:intergenic | 10.0% |
!! | AAAAATTTGTCAAAAAAAAA+TGG | + | chr4_4:68064306-68064325 | None:intergenic | 10.0% |
!! | CATAATAATTCAAAAAAATT+AGG | + | chr4_4:68064803-68064822 | None:intergenic | 10.0% |
!! | CAATAATAAATAAAACTAAA+AGG | + | chr4_4:68065011-68065030 | None:intergenic | 10.0% |
!!! | TTTAGTTTTATTTATTATTG+TGG | - | chr4_4:68065011-68065030 | Msa0697970:intron | 10.0% |
!!! | TTAGTTTTATTTATTATTGT+GGG | - | chr4_4:68065012-68065031 | Msa0697970:intron | 10.0% |
!! | ATATATAAAGTAATTGGATT+GGG | + | chr4_4:68063092-68063111 | None:intergenic | 15.0% |
!! | TATATATAAAGTAATTGGAT+TGG | + | chr4_4:68063093-68063112 | None:intergenic | 15.0% |
!! | AATCCAATTACTTTATATAT+AGG | - | chr4_4:68063092-68063111 | Msa0697970:three_prime_UTR | 15.0% |
!! | AAATAATTGAAATACTATGT+TGG | + | chr4_4:68063480-68063499 | None:intergenic | 15.0% |
!! | AACATTGCATAATATATTTA+GGG | + | chr4_4:68063621-68063640 | None:intergenic | 15.0% |
!!! | TTTTAAGAAACTAGTTTTTT+GGG | - | chr4_4:68064232-68064251 | Msa0697970:CDS | 15.0% |
!! | TTAATGCAAGTATATTAATA+TGG | + | chr4_4:68064335-68064354 | None:intergenic | 15.0% |
!!! | AAAGGATGAAAATTTTATAA+TGG | + | chr4_4:68064993-68065012 | None:intergenic | 15.0% |
!!! | ATTATAATTTAATTTCCCTT+AGG | - | chr4_4:68065048-68065067 | Msa0697970:intron | 15.0% |
!! | GAAATTCAATATAAAGAATA+TGG | + | chr4_4:68065450-68065469 | None:intergenic | 15.0% |
!! | AATGACTTATATATATATAC+AGG | - | chr4_4:68065574-68065593 | Msa0697970:intron | 15.0% |
!!! | GTTAATTGTTTTAATTTACA+TGG | - | chr4_4:68066303-68066322 | Msa0697970:intron | 15.0% |
!! | TTAATGTGTTAATTATTTGA+AGG | - | chr4_4:68066584-68066603 | Msa0697970:intron | 15.0% |
!! | TAATGTGTTAATTATTTGAA+GGG | - | chr4_4:68066585-68066604 | Msa0697970:intron | 15.0% |
!! | TATAATATAACAACTTCAAA+TGG | + | chr4_4:68067225-68067244 | None:intergenic | 15.0% |
!! | TATATACTATTCAATGTATA+TGG | - | chr4_4:68067344-68067363 | Msa0697970:five_prime_UTR | 15.0% |
!!! | TGTTAGAGGTTATAATTTTT+AGG | - | chr4_4:68063322-68063341 | Msa0697970:CDS | 20.0% |
!! | GAACATTGCATAATATATTT+AGG | + | chr4_4:68063622-68063641 | None:intergenic | 20.0% |
!! | TATTAGAAAATTGTGAAAAG+TGG | - | chr4_4:68063825-68063844 | Msa0697970:intron | 20.0% |
!! | TGCAAGACTATTAAAAATAT+GGG | + | chr4_4:68063948-68063967 | None:intergenic | 20.0% |
!! | ATAAACTTGATTTAAATTGC+TGG | + | chr4_4:68063988-68064007 | None:intergenic | 20.0% |
!! | AACTATATTCTTCAATGTTA+CGG | + | chr4_4:68064045-68064064 | None:intergenic | 20.0% |
!! | AATACGGATGATAATAAAAA+TGG | + | chr4_4:68064140-68064159 | None:intergenic | 20.0% |
!!! | CTTTTAAGAAACTAGTTTTT+TGG | - | chr4_4:68064231-68064250 | Msa0697970:CDS | 20.0% |
!! | AAATGGTTCAAAATTTAATC+CGG | + | chr4_4:68064289-68064308 | None:intergenic | 20.0% |
!! | TTAATGATAGTTAACTATCT+GGG | + | chr4_4:68064496-68064515 | None:intergenic | 20.0% |
!!! | AAAATATTTCAACGTGTTTT+TGG | + | chr4_4:68064724-68064743 | None:intergenic | 20.0% |
!!! | TTGAATTTTAGAATCCAAAT+AGG | - | chr4_4:68064742-68064761 | Msa0697970:intron | 20.0% |
!! | TAATGAAAATGAAAACCTAA+GGG | + | chr4_4:68065066-68065085 | None:intergenic | 20.0% |
!! | ATAATGAAAATGAAAACCTA+AGG | + | chr4_4:68065067-68065086 | None:intergenic | 20.0% |
!!! | GGTAATTAATTTGAAACAAT+AGG | - | chr4_4:68065363-68065382 | Msa0697970:intron | 20.0% |
!! | AAGAAAATTTATATGATGAG+AGG | + | chr4_4:68065472-68065491 | None:intergenic | 20.0% |
!! | GCAAAAAAATCAAACTATAT+AGG | - | chr4_4:68065492-68065511 | Msa0697970:intron | 20.0% |
!! | TTATTTCAAAACCTATTCTA+CGG | - | chr4_4:68065778-68065797 | Msa0697970:intron | 20.0% |
!! | ATTTCACAAATCATATGATA+TGG | + | chr4_4:68066534-68066553 | None:intergenic | 20.0% |
!!! | TAGTATATAGATCTCTAAAA+TGG | + | chr4_4:68067333-68067352 | None:intergenic | 20.0% |
! | CCTCCTATATATAAAGTAAT+TGG | + | chr4_4:68063098-68063117 | None:intergenic | 25.0% |
! | CCAATTACTTTATATATAGG+AGG | - | chr4_4:68063095-68063114 | Msa0697970:three_prime_UTR | 25.0% |
!!! | ACCTTTTCTCTATACTTTTT+GGG | + | chr4_4:68063129-68063148 | None:intergenic | 25.0% |
!!! | AGGTTATAATTTTTAGGTCA+TGG | - | chr4_4:68063328-68063347 | Msa0697970:CDS | 25.0% |
!!! | AATTTTTAGGTCATGGTAAT+CGG | - | chr4_4:68063335-68063354 | Msa0697970:CDS | 25.0% |
! | CACACTTATTCATCTTATAA+AGG | + | chr4_4:68063582-68063601 | None:intergenic | 25.0% |
! | CTTTATAAGATGAATAAGTG+TGG | - | chr4_4:68063580-68063599 | Msa0697970:intron | 25.0% |
! | CTGCAAGACTATTAAAAATA+TGG | + | chr4_4:68063949-68063968 | None:intergenic | 25.0% |
!! | ATGAATTGTTGTTAGTTTAG+TGG | - | chr4_4:68064006-68064025 | Msa0697970:CDS | 25.0% |
! | GGAAAAATTATTATCCATAG+TGG | + | chr4_4:68064098-68064117 | None:intergenic | 25.0% |
! | GATAGTAAAAGAAAATGGTT+TGG | + | chr4_4:68064259-68064278 | None:intergenic | 25.0% |
! | AACATTCATGCATTAAGTAT+TGG | - | chr4_4:68064365-68064384 | Msa0697970:CDS | 25.0% |
! | ACATTCATGCATTAAGTATT+GGG | - | chr4_4:68064366-68064385 | Msa0697970:CDS | 25.0% |
!! | AGTATTTTACACGTGTTTTT+AGG | + | chr4_4:68064465-68064484 | None:intergenic | 25.0% |
! | TAATGATAGTTAACTATCTG+GGG | + | chr4_4:68064495-68064514 | None:intergenic | 25.0% |
! | GTTAATGATAGTTAACTATC+TGG | + | chr4_4:68064497-68064516 | None:intergenic | 25.0% |
! | AACATAAAACAAATGAACGT+TGG | + | chr4_4:68064922-68064941 | None:intergenic | 25.0% |
! | AAGGAGTAGAATTTGATATT+TGG | - | chr4_4:68066089-68066108 | Msa0697970:intron | 25.0% |
!!! | TGTTTTAATTTACATGGCAT+AGG | - | chr4_4:68066309-68066328 | Msa0697970:intron | 25.0% |
!!! | GCAATACAATGTGTTATTTT+TGG | - | chr4_4:68066394-68066413 | Msa0697970:intron | 25.0% |
! | CTAATTCACAACTAGAATTA+TGG | - | chr4_4:68066508-68066527 | Msa0697970:intron | 25.0% |
! | TATATAATATATACCTTCCG+AGG | + | chr4_4:68066752-68066771 | None:intergenic | 25.0% |
! | TTCATTTAAATGAGTATGCA+TGG | - | chr4_4:68066783-68066802 | Msa0697970:intron | 25.0% |
! | ACCAATTTGAATGTTGTTAT+TGG | - | chr4_4:68066823-68066842 | Msa0697970:intron | 25.0% |
! | TCCAATAACAACATTCAAAT+TGG | + | chr4_4:68066827-68066846 | None:intergenic | 25.0% |
!! | TTCCTTGCTAATTGATTTGT+TGG | + | chr4_4:68063061-68063080 | None:intergenic | 30.0% |
! | TCCCAAAAAGTATAGAGAAA+AGG | - | chr4_4:68063125-68063144 | Msa0697970:three_prime_UTR | 30.0% |
! | GACCTTTTCTCTATACTTTT+TGG | + | chr4_4:68063130-68063149 | None:intergenic | 30.0% |
!!! | TAGATGTCTTGTTTTGTTAG+AGG | - | chr4_4:68063308-68063327 | Msa0697970:CDS | 30.0% |
TTCAATATTGTGTTGGAGAA+TGG | + | chr4_4:68063406-68063425 | None:intergenic | 30.0% | |
TGAAATACTATGTTGGAGAA+TGG | + | chr4_4:68063473-68063492 | None:intergenic | 30.0% | |
! | CATTGTAAGTTTAGCTTAGT+TGG | + | chr4_4:68063648-68063667 | None:intergenic | 30.0% |
TAGTTCAAATCTCATTCACA+TGG | - | chr4_4:68064060-68064079 | Msa0697970:CDS | 30.0% | |
GGTTATAAAAGAATTGACGA+TGG | + | chr4_4:68064119-68064138 | None:intergenic | 30.0% | |
GGTTGGATAGTAAAAGAAAA+TGG | + | chr4_4:68064264-68064283 | None:intergenic | 30.0% | |
!!! | ATTGTGTTTTGGTAAAGACA+TGG | + | chr4_4:68064413-68064432 | None:intergenic | 30.0% |
! | AAGCAACTTTCATTGTGTTT+TGG | + | chr4_4:68064424-68064443 | None:intergenic | 30.0% |
AATGATAGTTAACTATCTGG+GGG | + | chr4_4:68064494-68064513 | None:intergenic | 30.0% | |
!! | TTAAGGGGTTTTATGCAATT+CGG | + | chr4_4:68064696-68064715 | None:intergenic | 30.0% |
!!! | GTGTTTTTGGAAGTTTTAAG+GGG | + | chr4_4:68064711-68064730 | None:intergenic | 30.0% |
!!! | CGTGTTTTTGGAAGTTTTAA+GGG | + | chr4_4:68064712-68064731 | None:intergenic | 30.0% |
!!! | ACGTGTTTTTGGAAGTTTTA+AGG | + | chr4_4:68064713-68064732 | None:intergenic | 30.0% |
! | AAAACAAATGAACGTTGGTT+CGG | + | chr4_4:68064917-68064936 | None:intergenic | 30.0% |
GATACTCATTCCATCATATA+TGG | + | chr4_4:68065273-68065292 | None:intergenic | 30.0% | |
CATTATCAGTTGTGAATAGT+TGG | + | chr4_4:68065558-68065577 | None:intergenic | 30.0% | |
! | TTTTACCTTTCACTTCTAAG+TGG | - | chr4_4:68065624-68065643 | Msa0697970:intron | 30.0% |
ATAATCCACTTAGAAGTGAA+AGG | + | chr4_4:68065632-68065651 | None:intergenic | 30.0% | |
TTGCATTGCATCACATATAT+AGG | + | chr4_4:68065738-68065757 | None:intergenic | 30.0% | |
GTAGTTTCGAGGAATTAAAT+TGG | - | chr4_4:68065990-68066009 | Msa0697970:intron | 30.0% | |
!!! | TTGGTGTTGACATTTTACAA+AGG | - | chr4_4:68066070-68066089 | Msa0697970:intron | 30.0% |
TCCAAAAGATTGATTGCAAA+AGG | + | chr4_4:68066115-68066134 | None:intergenic | 30.0% | |
!! | ATAGCTTTGATGTCTGTAAT+AGG | - | chr4_4:68066370-68066389 | Msa0697970:intron | 30.0% |
!!! | TTTTTGGTTTCATTGTTGAG+AGG | - | chr4_4:68066410-68066429 | Msa0697970:intron | 30.0% |
!!! | TTTTGGTTTCATTGTTGAGA+GGG | - | chr4_4:68066411-68066430 | Msa0697970:intron | 30.0% |
GAATCATACCGAAAAAACAA+CGG | + | chr4_4:68066479-68066498 | None:intergenic | 30.0% | |
!! | GTGAAATTGTTGACTCATAA+AGG | - | chr4_4:68066547-68066566 | Msa0697970:intron | 30.0% |
TGGAATAATGATTCTTGTCA+TGG | - | chr4_4:68066620-68066639 | Msa0697970:intron | 30.0% | |
TGGATCTGATGATATATAGT+TGG | - | chr4_4:68066843-68066862 | Msa0697970:intron | 30.0% | |
TTGTGTGTGTATAGTATACT+AGG | - | chr4_4:68066963-68066982 | Msa0697970:intron | 30.0% | |
TGCCAACAAATCAATTAGCA+AGG | - | chr4_4:68063056-68063075 | Msa0697970:three_prime_UTR | 35.0% | |
!!! | TCTCTATACTTTTTGGGACT+TGG | + | chr4_4:68063123-68063142 | None:intergenic | 35.0% |
AACAACTAAAAACACAGCCA+AGG | - | chr4_4:68063208-68063227 | Msa0697970:three_prime_UTR | 35.0% | |
! | AGGAGTTGCTATCTTTTTCT+TGG | + | chr4_4:68063241-68063260 | None:intergenic | 35.0% |
TTGTGTTGGAGAATGGTAAT+TGG | + | chr4_4:68063399-68063418 | None:intergenic | 35.0% | |
!! | CGTTGACTTCAATATTGTGT+TGG | + | chr4_4:68063413-68063432 | None:intergenic | 35.0% |
TATGTTGGAGAATGGTGAAA+GGG | + | chr4_4:68063465-68063484 | None:intergenic | 35.0% | |
!! | AATACTAAAGAGTGTCTGTG+TGG | - | chr4_4:68063770-68063789 | Msa0697970:CDS | 35.0% |
TGTCTGTGTGGTACTAATTA+AGG | - | chr4_4:68063782-68063801 | Msa0697970:CDS | 35.0% | |
ATCTCGTGCACTAGTTAAAA+AGG | + | chr4_4:68063913-68063932 | None:intergenic | 35.0% | |
GGTTATTAATCTCACCACTA+TGG | - | chr4_4:68064081-68064100 | Msa0697970:intron | 35.0% | |
GGTTCAAAATTTAATCCGGT+CGG | + | chr4_4:68064285-68064304 | None:intergenic | 35.0% | |
CACATGTTTGTAGGAAACAT+TGG | - | chr4_4:68064570-68064589 | Msa0697970:CDS | 35.0% | |
ATCAATGGTGTGATGACATT+TGG | + | chr4_4:68064845-68064864 | None:intergenic | 35.0% | |
TACAAGCTTGCCATATATGA+TGG | - | chr4_4:68065260-68065279 | Msa0697970:CDS | 35.0% | |
AATAAGAGCAAGAGGAATAG+TGG | + | chr4_4:68065336-68065355 | None:intergenic | 35.0% | |
CTTTCGAAAATAAGAGCAAG+AGG | + | chr4_4:68065344-68065363 | None:intergenic | 35.0% | |
!!! | CTCTTGCTCTTATTTTCGAA+AGG | - | chr4_4:68065342-68065361 | Msa0697970:intron | 35.0% |
AATGCAATGCAATGAAACAG+TGG | - | chr4_4:68065751-68065770 | Msa0697970:intron | 35.0% | |
TTAAACATACCCGAAAGACA+CGG | + | chr4_4:68065878-68065897 | None:intergenic | 35.0% | |
ATTAAATTGGCGAGCAGTAA+CGG | - | chr4_4:68066003-68066022 | Msa0697970:intron | 35.0% | |
AAGGTTGTAGGAACTATACT+TGG | - | chr4_4:68066034-68066053 | Msa0697970:intron | 35.0% | |
! | GAACTATACTTGGATTTGCT+GGG | - | chr4_4:68066044-68066063 | Msa0697970:intron | 35.0% |
!! | AACTATACTTGGATTTGCTG+GGG | - | chr4_4:68066045-68066064 | Msa0697970:intron | 35.0% |
! | GCCTTTTGCAATCAATCTTT+TGG | - | chr4_4:68066111-68066130 | Msa0697970:intron | 35.0% |
TAGAACACCTAACAATTCAG+TGG | + | chr4_4:68066176-68066195 | None:intergenic | 35.0% | |
TCAAAGCTATGCTTGATTGA+GGG | + | chr4_4:68066360-68066379 | None:intergenic | 35.0% | |
ATCAAAGCTATGCTTGATTG+AGG | + | chr4_4:68066361-68066380 | None:intergenic | 35.0% | |
TAATGATTCTTGTCATGGCA+TGG | - | chr4_4:68066625-68066644 | Msa0697970:intron | 35.0% | |
AATGATTCTTGTCATGGCAT+GGG | - | chr4_4:68066626-68066645 | Msa0697970:intron | 35.0% | |
TTGAAAGCAGACGCATATAA+AGG | + | chr4_4:68066669-68066688 | None:intergenic | 35.0% | |
!! | GCTACAATCAAAAGCATTAG+AGG | + | chr4_4:68066693-68066712 | None:intergenic | 35.0% |
TTGGATGAGAAGTTAAACCT+CGG | - | chr4_4:68066732-68066751 | Msa0697970:intron | 35.0% | |
! | AAATTGGTTCAATCTCTGCA+AGG | + | chr4_4:68066811-68066830 | None:intergenic | 35.0% |
TGTGTGTATAGTATACTAGG+AGG | - | chr4_4:68066966-68066985 | Msa0697970:intron | 35.0% | |
TCATCACCAATGATTTCTGA+GGG | + | chr4_4:68067068-68067087 | None:intergenic | 35.0% | |
ATCATCACCAATGATTTCTG+AGG | + | chr4_4:68067069-68067088 | None:intergenic | 35.0% | |
! | AAATTTTCACTCAAGAGTCG+AGG | - | chr4_4:68067147-68067166 | Msa0697970:five_prime_UTR | 35.0% |
!! | GTTGTTGTTGTAGTTTTGCC+TGG | + | chr4_4:68063194-68063213 | None:intergenic | 40.0% |
AAAAACACAGCCAAGGAACA+AGG | - | chr4_4:68063215-68063234 | Msa0697970:three_prime_UTR | 40.0% | |
!!! | TTTTTCTTGGCCTTGTTCCT+TGG | + | chr4_4:68063228-68063247 | None:intergenic | 40.0% |
! | TACGTACCAGTAAGTGGATT+GGG | + | chr4_4:68063276-68063295 | None:intergenic | 40.0% |
TTACGTACCAGTAAGTGGAT+TGG | + | chr4_4:68063277-68063296 | None:intergenic | 40.0% | |
CAATGTTACGTACCAGTAAG+TGG | + | chr4_4:68063282-68063301 | None:intergenic | 40.0% | |
CTATGTTGGAGAATGGTGAA+AGG | + | chr4_4:68063466-68063485 | None:intergenic | 40.0% | |
! | TCTTTTACTATCCAACCGAC+CGG | - | chr4_4:68064267-68064286 | Msa0697970:CDS | 40.0% |
CAAAATTTAATCCGGTCGGT+TGG | + | chr4_4:68064281-68064300 | None:intergenic | 40.0% | |
!! | TCATGCATTAAGTATTGGGC+TGG | - | chr4_4:68064370-68064389 | Msa0697970:CDS | 40.0% |
!! | CATGCATTAAGTATTGGGCT+GGG | - | chr4_4:68064371-68064390 | Msa0697970:CDS | 40.0% |
CAACGGTAGTTAACTACAGT+CGG | + | chr4_4:68064534-68064553 | None:intergenic | 40.0% | |
GACTGTAGTTAACTACCGTT+GGG | - | chr4_4:68064533-68064552 | Msa0697970:intron | 40.0% | |
! | GTTAACTACCGTTGGGTTTT+TGG | - | chr4_4:68064540-68064559 | Msa0697970:intron | 40.0% |
GAGAATGACCAAAAACCCAA+CGG | + | chr4_4:68064551-68064570 | None:intergenic | 40.0% | |
GGTCATTCTCACATGTTTGT+AGG | - | chr4_4:68064561-68064580 | Msa0697970:CDS | 40.0% | |
TCATAGGGTGGGAAAAGTAA+TGG | - | chr4_4:68064777-68064796 | Msa0697970:CDS | 40.0% | |
!! | AGTTTGACTCGGACTATCAA+TGG | + | chr4_4:68064860-68064879 | None:intergenic | 40.0% |
TCACGAACGTAAGTTTGACT+CGG | + | chr4_4:68064871-68064890 | None:intergenic | 40.0% | |
ACCATACTTCCCTTCCTTAA+TGG | - | chr4_4:68065127-68065146 | Msa0697970:CDS | 40.0% | |
TTGCAGTCTGATCTTGAAGA+TGG | - | chr4_4:68065160-68065179 | Msa0697970:CDS | 40.0% | |
TGCAGTCTGATCTTGAAGAT+GGG | - | chr4_4:68065161-68065180 | Msa0697970:CDS | 40.0% | |
AACACTCTCCAAGTCATCTT+CGG | + | chr4_4:68065606-68065625 | None:intergenic | 40.0% | |
AAACAAGAGCTCCGTAGAAT+AGG | + | chr4_4:68065792-68065811 | None:intergenic | 40.0% | |
TGATCGTCTATGTAGTTTCG+AGG | - | chr4_4:68065979-68065998 | Msa0697970:intron | 40.0% | |
TTAAATTGGCGAGCAGTAAC+GGG | - | chr4_4:68066004-68066023 | Msa0697970:intron | 40.0% | |
GGAACTATACTTGGATTTGC+TGG | - | chr4_4:68066043-68066062 | Msa0697970:intron | 40.0% | |
GATGCTACCACTGAATTGTT+AGG | - | chr4_4:68066166-68066185 | Msa0697970:intron | 40.0% | |
! | GTTGCTTCTGTTTCTCAATC+TGG | - | chr4_4:68066209-68066228 | Msa0697970:intron | 40.0% |
ATACCGAAAAAACAACGGTG+AGG | + | chr4_4:68066474-68066493 | None:intergenic | 40.0% | |
! | TTGAAGGGAGTTTTTGCATC+TGG | - | chr4_4:68066600-68066619 | Msa0697970:intron | 40.0% |
TAACTTCTCATCCAAGAGCA+TGG | + | chr4_4:68066727-68066746 | None:intergenic | 40.0% | |
ATGAGAAGTTAAACCTCGGA+AGG | - | chr4_4:68066736-68066755 | Msa0697970:intron | 40.0% | |
GATTGTTTGTGGCCTATACT+CGG | - | chr4_4:68066995-68067014 | Msa0697970:intron | 40.0% | |
TTACAGCCCTCAGAAATCAT+TGG | - | chr4_4:68067059-68067078 | Msa0697970:intron | 40.0% | |
TAAATGACCATCGATGCTCA+TGG | + | chr4_4:68067119-68067138 | None:intergenic | 40.0% | |
AGTCATGCGTACATAATAGC+TGG | + | chr4_4:68067260-68067279 | None:intergenic | 40.0% | |
ACTCTCACTCTTACTACACA+TGG | - | chr4_4:68067277-68067296 | Msa0697970:five_prime_UTR | 40.0% | |
! | CAGTAAACACAAAGCACCAG+AGG | - | chr4_4:68063149-68063168 | Msa0697970:three_prime_UTR | 45.0% |
!! | ACAAAGCACCAGAGGTACTA+AGG | - | chr4_4:68063157-68063176 | Msa0697970:three_prime_UTR | 45.0% |
GTGTTTGTCCTTAGTACCTC+TGG | + | chr4_4:68063168-68063187 | None:intergenic | 45.0% | |
CGACTGTAGTTAACTACCGT+TGG | - | chr4_4:68064532-68064551 | Msa0697970:intron | 45.0% | |
GCCATTAAGGAAGGGAAGTA+TGG | + | chr4_4:68065131-68065150 | None:intergenic | 45.0% | |
TACTTCCCTTCCTTAATGGC+TGG | - | chr4_4:68065131-68065150 | Msa0697970:CDS | 45.0% | |
ACTTCCCTTCCTTAATGGCT+GGG | - | chr4_4:68065132-68065151 | Msa0697970:CDS | 45.0% | |
!! | CATTAGCAAGGCTGGTTTCA+AGG | + | chr4_4:68065201-68065220 | None:intergenic | 45.0% |
CTTGAAACCAGCCTTGCTAA+TGG | - | chr4_4:68065199-68065218 | Msa0697970:CDS | 45.0% | |
AAACCAGCCTTGCTAATGGT+TGG | - | chr4_4:68065203-68065222 | Msa0697970:CDS | 45.0% | |
AACCAGCCTTGCTAATGGTT+GGG | - | chr4_4:68065204-68065223 | Msa0697970:CDS | 45.0% | |
AATAGTGGTAACCGCTGCAA+AGG | + | chr4_4:68065321-68065340 | None:intergenic | 45.0% | |
! | CAAAAGTGACGGAGGGAATA+AGG | + | chr4_4:68065849-68065868 | None:intergenic | 45.0% |
TTTGTCTTGGCCGTGTCTTT+CGG | - | chr4_4:68065865-68065884 | Msa0697970:intron | 45.0% | |
! | CTCAATCTGGCTCATCATTC+AGG | - | chr4_4:68066222-68066241 | Msa0697970:intron | 45.0% |
TTGAGAGGGATTTGAACCAG+TGG | - | chr4_4:68066425-68066444 | Msa0697970:intron | 45.0% | |
GATTTGAACCAGTGGAAGCT+TGG | - | chr4_4:68066433-68066452 | Msa0697970:intron | 45.0% | |
!!! | GCTCCTCACCGTTGTTTTTT+CGG | - | chr4_4:68066468-68066487 | Msa0697970:intron | 45.0% |
!! | GGAGGAGTGTTGATTGTTTG+TGG | - | chr4_4:68066984-68067003 | Msa0697970:intron | 45.0% |
GATGCTCATGGACTCAACAA+TGG | + | chr4_4:68067107-68067126 | None:intergenic | 45.0% | |
!! | GATTTAAAAATATTTAAATA+CGG | + | chr4_4:68064156-68064175 | None:intergenic | 5.0% |
ACTAAGGACAAACACACGCC+AGG | - | chr4_4:68063173-68063192 | Msa0697970:three_prime_UTR | 50.0% | |
ATAGCAACTCCTCGAAGAGC+CGG | - | chr4_4:68063249-68063268 | Msa0697970:three_prime_UTR | 50.0% | |
!! | ACCAGTAAGTGGATTGGGTC+CGG | + | chr4_4:68063271-68063290 | None:intergenic | 50.0% |
GGCTGGGCATAAGTCTAGAT+GGG | - | chr4_4:68064387-68064406 | Msa0697970:CDS | 50.0% | |
CTGTGAGAAGCTCATAGGGT+GGG | + | chr4_4:68064647-68064666 | None:intergenic | 50.0% | |
GAGCCTGTGAGAAGCTCATA+GGG | + | chr4_4:68064651-68064670 | None:intergenic | 50.0% | |
AGAGCCTGTGAGAAGCTCAT+AGG | + | chr4_4:68064652-68064671 | None:intergenic | 50.0% | |
CTCACAGGCTCTATGCAGTT+CGG | - | chr4_4:68064660-68064679 | Msa0697970:intron | 50.0% | |
GAGCTTCTCGACGTCCTATT+TGG | + | chr4_4:68064759-68064778 | None:intergenic | 50.0% | |
TAGGACGTCGAGAAGCTCAT+AGG | - | chr4_4:68064761-68064780 | Msa0697970:intron | 50.0% | |
AGGACGTCGAGAAGCTCATA+GGG | - | chr4_4:68064762-68064781 | Msa0697970:intron | 50.0% | |
CTTCCCTTCCTTAATGGCTG+GGG | - | chr4_4:68065133-68065152 | Msa0697970:CDS | 50.0% | |
AGACCCCAGCCATTAAGGAA+GGG | + | chr4_4:68065139-68065158 | None:intergenic | 50.0% | |
TAGACCCCAGCCATTAAGGA+AGG | + | chr4_4:68065140-68065159 | None:intergenic | 50.0% | |
GCAATAGACCCCAGCCATTA+AGG | + | chr4_4:68065144-68065163 | None:intergenic | 50.0% | |
ACCAGCCTTGCTAATGGTTG+GGG | - | chr4_4:68065205-68065224 | Msa0697970:CDS | 50.0% | |
TTGCACCCCAACCATTAGCA+AGG | + | chr4_4:68065213-68065232 | None:intergenic | 50.0% | |
GGAAGAGACCGAAGATGACT+TGG | - | chr4_4:68065595-68065614 | Msa0697970:intron | 50.0% | |
!!! | TCCCTCCGTCACTTTTGTCT+TGG | - | chr4_4:68065852-68065871 | Msa0697970:intron | 50.0% |
! | GCCAAGACAAAAGTGACGGA+GGG | + | chr4_4:68065856-68065875 | None:intergenic | 50.0% |
CACGGCCAAGACAAAAGTGA+CGG | + | chr4_4:68065860-68065879 | None:intergenic | 50.0% | |
TTGTCTTGGCCGTGTCTTTC+GGG | - | chr4_4:68065866-68065885 | Msa0697970:intron | 50.0% | |
! | AGCAGTAACGGGAAAGGCAA+AGG | - | chr4_4:68066015-68066034 | Msa0697970:intron | 50.0% |
ACGGGAAAGGCAAAGGTTGT+AGG | - | chr4_4:68066022-68066041 | Msa0697970:intron | 50.0% | |
!! | ACTTGGATTTGCTGGGGCAT+TGG | - | chr4_4:68066051-68066070 | Msa0697970:intron | 50.0% |
GGATCCAAAGAACGACCACA+CGG | - | chr4_4:68066132-68066151 | Msa0697970:intron | 50.0% | |
GCTATGCTTGATTGAGGGCA+TGG | + | chr4_4:68066355-68066374 | None:intergenic | 50.0% | |
TGAACCAGTGGAAGCTTGGT+TGG | - | chr4_4:68066437-68066456 | Msa0697970:intron | 50.0% | |
GAACCAGTGGAAGCTTGGTT+GGG | - | chr4_4:68066438-68066457 | Msa0697970:intron | 50.0% | |
TATCCCAACCAAGCTTCCAC+TGG | + | chr4_4:68066444-68066463 | None:intergenic | 50.0% | |
GGAAGCTTGGTTGGGATATC+AGG | - | chr4_4:68066446-68066465 | Msa0697970:intron | 50.0% | |
GCATGGGTCGTACAGAAGAA+AGG | - | chr4_4:68066642-68066661 | Msa0697970:intron | 50.0% | |
ATTCGTCGCATCCATGCTCT+TGG | - | chr4_4:68066713-68066732 | Msa0697970:intron | 50.0% | |
!! | TGGCCTATACTCGGTGCTAT+GGG | - | chr4_4:68067004-68067023 | Msa0697970:intron | 50.0% |
! | TACCCCATAGCACCGAGTAT+AGG | + | chr4_4:68067010-68067029 | None:intergenic | 50.0% |
!! | TACTCGGTGCTATGGGGTAA+AGG | - | chr4_4:68067011-68067030 | Msa0697970:intron | 50.0% |
GTGATGATTCCGAAGCTGCA+AGG | - | chr4_4:68067081-68067100 | Msa0697970:intron | 50.0% | |
! | CAACAATGGCCTTGCAGCTT+CGG | + | chr4_4:68067093-68067112 | None:intergenic | 50.0% |
!! | GTTGAGTCCATGAGCATCGA+TGG | - | chr4_4:68067109-68067128 | Msa0697970:intron | 50.0% |
GGGCTGGGCATAAGTCTAGA+TGG | - | chr4_4:68064386-68064405 | Msa0697970:CDS | 55.0% | |
CCTGTGAGAAGCTCATAGGG+TGG | + | chr4_4:68064648-68064667 | None:intergenic | 55.0% | |
CCACCCTATGAGCTTCTCAC+AGG | - | chr4_4:68064645-68064664 | Msa0697970:intron | 55.0% | |
ACGTCGAGAAGCTCATAGGG+TGG | - | chr4_4:68064765-68064784 | Msa0697970:intron | 55.0% | |
CGTCGAGAAGCTCATAGGGT+GGG | - | chr4_4:68064766-68064785 | Msa0697970:intron | 55.0% | |
ACCCCAACCATTAGCAAGGC+TGG | + | chr4_4:68065209-68065228 | None:intergenic | 55.0% | |
CTATCGTCTCGCCTTTGCAG+CGG | - | chr4_4:68065307-68065326 | Msa0697970:five_prime_UTR | 55.0% | |
GGCCAAGACAAAAGTGACGG+AGG | + | chr4_4:68065857-68065876 | None:intergenic | 55.0% | |
! | TTGGCGAGCAGTAACGGGAA+AGG | - | chr4_4:68066009-68066028 | Msa0697970:intron | 55.0% |
CGTTCCGTGTGGTCGTTCTT+TGG | + | chr4_4:68066139-68066158 | None:intergenic | 55.0% | |
CATCAGTGACACGTTCCGTG+TGG | + | chr4_4:68066150-68066169 | None:intergenic | 55.0% | |
!! | GTGGCCTATACTCGGTGCTA+TGG | - | chr4_4:68067003-68067022 | Msa0697970:intron | 55.0% |
!! | GGCCTATACTCGGTGCTATG+GGG | - | chr4_4:68067005-68067024 | Msa0697970:intron | 55.0% |
GCCGGACCCAATCCACTTAC+TGG | - | chr4_4:68063267-68063286 | Msa0697970:three_prime_UTR | 60.0% | |
CGCTGCAAAGGCGAGACGAT+AGG | + | chr4_4:68065309-68065328 | None:intergenic | 60.0% | |
GGATTGGGTCCGGCTCTTCG+AGG | + | chr4_4:68063261-68063280 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 68063033 | 68067395 | 68063033 | ID=Msa0697970;Name=Msa0697970 |
chr4_4 | mRNA | 68063033 | 68067395 | 68063033 | ID=Msa0697970-mRNA-1;Parent=Msa0697970;Name=Msa0697970-mRNA-1;_AED=0.09;_eAED=0.09;_QI=332|1|1|1|0.85|0.75|8|274|366 |
chr4_4 | exon | 68063033 | 68063451 | 68063033 | ID=Msa0697970-mRNA-1:exon:20178;Parent=Msa0697970-mRNA-1 |
chr4_4 | exon | 68063671 | 68063822 | 68063671 | ID=Msa0697970-mRNA-1:exon:20177;Parent=Msa0697970-mRNA-1 |
chr4_4 | exon | 68063939 | 68064097 | 68063939 | ID=Msa0697970-mRNA-1:exon:20176;Parent=Msa0697970-mRNA-1 |
chr4_4 | exon | 68064185 | 68064434 | 68064185 | ID=Msa0697970-mRNA-1:exon:20175;Parent=Msa0697970-mRNA-1 |
chr4_4 | exon | 68064541 | 68064657 | 68064541 | ID=Msa0697970-mRNA-1:exon:20174;Parent=Msa0697970-mRNA-1 |
chr4_4 | exon | 68064773 | 68064832 | 68064773 | ID=Msa0697970-mRNA-1:exon:20173;Parent=Msa0697970-mRNA-1 |
chr4_4 | exon | 68065065 | 68065358 | 68065065 | ID=Msa0697970-mRNA-1:exon:20172;Parent=Msa0697970-mRNA-1 |
chr4_4 | exon | 68067140 | 68067395 | 68067140 | ID=Msa0697970-mRNA-1:exon:20171;Parent=Msa0697970-mRNA-1 |
chr4_4 | five_prime_UTR | 68067140 | 68067395 | 68067140 | ID=Msa0697970-mRNA-1:five_prime_utr;Parent=Msa0697970-mRNA-1 |
chr4_4 | five_prime_UTR | 68065283 | 68065358 | 68065283 | ID=Msa0697970-mRNA-1:five_prime_utr;Parent=Msa0697970-mRNA-1 |
chr4_4 | CDS | 68065065 | 68065282 | 68065065 | ID=Msa0697970-mRNA-1:cds;Parent=Msa0697970-mRNA-1 |
chr4_4 | CDS | 68064773 | 68064832 | 68064773 | ID=Msa0697970-mRNA-1:cds;Parent=Msa0697970-mRNA-1 |
chr4_4 | CDS | 68064541 | 68064657 | 68064541 | ID=Msa0697970-mRNA-1:cds;Parent=Msa0697970-mRNA-1 |
chr4_4 | CDS | 68064185 | 68064434 | 68064185 | ID=Msa0697970-mRNA-1:cds;Parent=Msa0697970-mRNA-1 |
chr4_4 | CDS | 68063939 | 68064097 | 68063939 | ID=Msa0697970-mRNA-1:cds;Parent=Msa0697970-mRNA-1 |
chr4_4 | CDS | 68063671 | 68063822 | 68063671 | ID=Msa0697970-mRNA-1:cds;Parent=Msa0697970-mRNA-1 |
chr4_4 | CDS | 68063307 | 68063451 | 68063307 | ID=Msa0697970-mRNA-1:cds;Parent=Msa0697970-mRNA-1 |
chr4_4 | three_prime_UTR | 68063033 | 68063306 | 68063033 | ID=Msa0697970-mRNA-1:three_prime_utr;Parent=Msa0697970-mRNA-1 |
Gene Sequence |
Protein sequence |