AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0698080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0698080 MtrunA17_Chr4g0036991 66.327 98 29 1 200 293 493 590 3.07e-31 122
Msa0698080 MtrunA17_Chr4g0036991 52.174 161 46 5 20 155 74 228 9.86e-30 118
Msa0698080 MtrunA17_Chr4g0036991 59.259 81 29 2 160 238 321 399 2.26e-20 90.9
Msa0698080 MtrunA17_Chr1g0158701 70.909 55 16 0 186 240 22 76 5.66e-20 84.7
Msa0698080 MtrunA17_Chr1g0160701 64.407 59 21 0 186 244 378 436 1.13e-18 86.3
Msa0698080 MtrunA17_Chr1g0160701 49.180 61 29 1 232 290 560 620 3.13e-11 63.9
Msa0698080 MtrunA17_Chr1g0160531 62.069 58 22 0 186 243 157 214 1.00e-17 82.8
Msa0698080 MtrunA17_Chr1g0160531 45.902 61 31 1 232 290 338 398 9.09e-11 62.0
Msa0698080 MtrunA17_Chr1g0157911 51.807 83 38 1 157 237 401 483 1.19e-17 83.2
Msa0698080 MtrunA17_Chr1g0157911 50.820 61 27 1 232 289 613 673 2.97e-11 63.9
Msa0698080 MtrunA17_Chr1g0158411 65.574 61 20 1 186 246 438 497 1.60e-17 82.8
Msa0698080 MtrunA17_Chr1g0158411 53.333 60 26 1 232 289 619 678 1.75e-12 67.8
Msa0698080 MtrunA17_Chr1g0158761 69.091 55 17 0 186 240 368 422 1.88e-17 82.4
Msa0698080 MtrunA17_Chr1g0158761 61.667 60 21 1 232 289 549 608 1.38e-16 79.7
Msa0698080 MtrunA17_Chr1g0160661 61.017 59 23 0 186 244 385 443 2.74e-17 81.6
Msa0698080 MtrunA17_Chr1g0158091 65.455 55 19 0 186 240 105 159 3.97e-17 80.9
Msa0698080 MtrunA17_Chr1g0158091 58.333 60 23 1 232 289 286 345 4.18e-11 62.8
Msa0698080 MtrunA17_Chr6g0467711 71.154 52 15 0 186 237 434 485 4.81e-17 81.3
Msa0698080 MtrunA17_Chr6g0467711 53.333 60 26 1 232 289 615 674 3.66e-13 69.7
Msa0698080 MtrunA17_Chr1g0157951 63.333 60 20 1 232 289 395 454 5.68e-17 80.9
Msa0698080 MtrunA17_Chr1g0157951 65.455 55 19 0 186 240 214 268 3.67e-16 78.6
Msa0698080 MtrunA17_Chr1g0158751 65.455 55 19 0 186 240 129 183 6.86e-17 80.5
Msa0698080 MtrunA17_Chr1g0158751 48.529 68 28 2 232 292 310 377 5.17e-12 65.9
Msa0698080 MtrunA17_Chr1g0157811 63.333 60 20 1 232 289 414 473 6.92e-17 80.5
Msa0698080 MtrunA17_Chr1g0157811 65.455 55 19 0 186 240 233 287 1.38e-16 79.7
Msa0698080 MtrunA17_Chr1g0158191 59.091 66 25 1 226 289 599 664 7.13e-17 80.9
Msa0698080 MtrunA17_Chr1g0158191 60.000 55 22 0 186 240 424 478 1.88e-14 73.6
Msa0698080 MtrunA17_Chr1g0157791 63.333 60 20 1 232 289 601 660 9.14e-17 80.5
Msa0698080 MtrunA17_Chr1g0157791 65.455 55 19 0 186 240 420 474 2.05e-16 79.3
Msa0698080 MtrunA17_Chr3g0088321 40.541 111 64 1 127 237 29 137 9.41e-17 79.7
Msa0698080 MtrunA17_Chr3g0088321 51.667 60 27 1 232 289 267 326 8.91e-13 67.8
Msa0698080 MtrunA17_Chr1g0158131 65.455 55 19 0 186 240 237 291 9.56e-17 79.7
Msa0698080 MtrunA17_Chr1g0158571 49.412 85 40 2 186 268 246 329 1.33e-16 79.7
Msa0698080 MtrunA17_Chr1g0158571 48.529 68 28 3 232 292 427 494 2.20e-11 64.3
Msa0698080 MtrunA17_Chr1g0160711 60.345 58 23 0 186 243 361 418 1.39e-16 79.7
Msa0698080 MtrunA17_Chr1g0158151 65.455 55 19 0 186 240 419 473 1.94e-16 79.3
Msa0698080 MtrunA17_Chr1g0158151 60.000 60 22 1 232 289 600 659 3.90e-16 78.6
Msa0698080 MtrunA17_Chr1g0160761 60.345 58 23 0 186 243 368 425 2.03e-16 79.3
Msa0698080 MtrunA17_Chr1g0160721 60.345 58 23 0 186 243 384 441 2.30e-16 79.3
Msa0698080 MtrunA17_Chr1g0160721 47.541 61 30 1 232 290 566 626 7.52e-12 65.9
Msa0698080 MtrunA17_Chr1g0160561 48.235 85 40 2 162 243 353 436 2.71e-16 79.0
Msa0698080 MtrunA17_Chr1g0158631 59.375 64 25 1 186 249 417 479 3.25e-16 79.0
Msa0698080 MtrunA17_Chr1g0158631 29.327 208 111 8 96 289 473 658 2.64e-11 63.9
Msa0698080 MtrunA17_Chr1g0158441 61.905 63 23 1 186 248 62 123 3.52e-16 77.8
Msa0698080 MtrunA17_Chr1g0158441 52.542 59 26 1 232 288 243 301 5.41e-11 62.4
Msa0698080 MtrunA17_Chr1g0158541 64.407 59 19 1 189 247 432 488 4.52e-16 78.6
Msa0698080 MtrunA17_Chr1g0158541 56.667 60 23 1 232 288 610 669 1.86e-14 73.6
Msa0698080 MtrunA17_Chr7g0232421 60.000 55 22 0 186 240 96 150 5.83e-16 77.4
Msa0698080 MtrunA17_Chr1g0158301 67.308 52 17 0 189 240 430 481 5.99e-16 78.2
Msa0698080 MtrunA17_Chr1g0158301 53.333 60 25 1 232 288 608 667 2.47e-13 70.1
Msa0698080 MtrunA17_Chr1g0158661 63.636 55 20 0 186 240 403 457 1.08e-15 77.4
Msa0698080 MtrunA17_Chr1g0158041 63.636 55 20 0 186 240 424 478 1.13e-15 77.4
Msa0698080 MtrunA17_Chr1g0158041 56.667 60 24 1 232 289 605 664 2.51e-14 73.2
Msa0698080 MtrunA17_Chr7g0232441 60.000 55 22 0 186 240 356 410 1.57e-15 76.6
Msa0698080 MtrunA17_Chr1g0209411 58.182 55 23 0 186 240 327 381 1.81e-15 76.3
Msa0698080 MtrunA17_Chr1g0160681 59.259 54 22 0 184 237 96 149 1.91e-15 75.9
Msa0698080 MtrunA17_Chr1g0209471 59.259 54 22 0 187 240 97 150 2.03e-15 75.9
Msa0698080 MtrunA17_Chr6g0484041 46.512 86 43 1 186 268 356 441 2.54e-15 76.3
Msa0698080 MtrunA17_Chr1g0157991 58.333 60 23 1 232 289 608 667 2.70e-15 76.3
Msa0698080 MtrunA17_Chr1g0157991 60.000 55 22 0 186 240 427 481 5.06e-15 75.1
Msa0698080 MtrunA17_Chr6g0484021 45.349 86 44 1 186 268 340 425 4.66e-15 75.1
Msa0698080 MtrunA17_Chr6g0483981 45.349 86 44 1 186 268 301 386 6.84e-15 74.7
Msa0698080 MtrunA17_Chr1g0160771 61.538 52 20 0 186 237 334 385 7.96e-15 74.7
Msa0698080 MtrunA17_Chr1g0209481 58.182 55 23 0 186 240 241 295 1.10e-14 73.6
Msa0698080 MtrunA17_Chr1g0160581 59.615 52 21 0 186 237 338 389 1.43e-14 73.9
Msa0698080 MtrunA17_Chr6g0484071 58.333 60 25 0 186 245 92 151 1.75e-14 72.8
Msa0698080 MtrunA17_Chr6g0483851 45.349 86 44 1 186 268 444 529 1.76e-14 73.6
Msa0698080 MtrunA17_Chr1g0157861 65.306 49 17 0 189 237 471 519 1.83e-14 73.6
Msa0698080 MtrunA17_Chr1g0157881 63.265 49 18 0 189 237 502 550 2.13e-14 73.6
Msa0698080 MtrunA17_Chr1g0157881 50.000 68 27 3 232 292 680 747 6.41e-11 62.8
Msa0698080 MtrunA17_Chr6g0483821 58.333 60 25 0 186 245 393 452 2.52e-14 73.2
Msa0698080 MtrunA17_Chr1g0158341 58.333 60 23 1 232 289 243 302 2.74e-14 72.4
Msa0698080 MtrunA17_Chr1g0158341 60.000 60 23 1 186 245 62 120 3.02e-14 72.0
Msa0698080 MtrunA17_Chr1g0157931 66.667 48 16 0 190 237 310 357 2.94e-14 72.8
Msa0698080 MtrunA17_Chr1g0157931 50.000 68 27 3 232 292 487 554 5.63e-11 63.2
Msa0698080 MtrunA17_Chr1g0209401 56.364 55 24 0 186 240 87 141 7.02e-14 71.2
Msa0698080 MtrunA17_Chr6g0483791 45.349 86 44 1 186 268 403 488 1.32e-13 70.9
Msa0698080 MtrunA17_Chr1g0160731 55.769 52 23 0 186 237 330 381 2.65e-13 70.1
Msa0698080 MtrunA17_Chr1g0158141 60.417 48 19 0 242 289 7 54 3.45e-13 64.7
Msa0698080 MtrunA17_Chr6g0483811 43.023 86 46 1 186 268 92 177 3.79e-13 68.9
Msa0698080 MtrunA17_Chr7g0251001 37.374 99 58 2 142 238 48 144 4.13e-13 68.9
Msa0698080 MtrunA17_Chr1g0160691 50.820 61 28 1 232 290 18 78 4.48e-13 64.7
Msa0698080 MtrunA17_Chr8g0391231 45.122 82 43 1 166 247 350 429 5.12e-13 69.3
Msa0698080 MtrunA17_Chr7g0250741 55.769 52 23 0 187 238 568 619 6.26e-13 68.9
Msa0698080 MtrunA17_Chr7g0251061 56.604 53 23 0 186 238 381 433 6.84e-13 68.9
Msa0698080 MtrunA17_Chr6g0467641 57.143 49 21 0 189 237 229 277 1.97e-12 67.4
Msa0698080 MtrunA17_Chr6g0484091 47.458 59 31 0 186 244 36 94 2.78e-12 62.0
Msa0698080 MtrunA17_Chr1g0158391 41.379 87 47 2 153 237 257 341 3.05e-12 66.6
Msa0698080 MtrunA17_Chr6g0467701 57.143 49 21 0 189 237 70 118 4.07e-12 65.9
Msa0698080 MtrunA17_Chr1g0158351 51.923 52 25 0 186 237 5 56 5.00e-12 64.3
Msa0698080 MtrunA17_Chr7g0251051 39.080 87 49 2 186 268 346 432 5.39e-12 66.2
Msa0698080 MtrunA17_Chr1g0158321 55.102 49 22 0 189 237 70 118 5.61e-12 65.5
Msa0698080 MtrunA17_Chr3g0088341 41.379 87 47 2 153 237 278 362 6.02e-12 65.9
Msa0698080 MtrunA17_Chr7g0251101 41.096 73 41 1 166 238 374 444 6.13e-12 65.9
Msa0698080 MtrunA17_Chr6g0467681 57.143 49 21 0 189 237 300 348 6.62e-12 65.9
Msa0698080 MtrunA17_Chr7g0251071 52.830 53 25 0 186 238 386 438 7.07e-12 65.9
Msa0698080 MtrunA17_Chr1g0158641 58.824 51 19 1 232 280 42 92 8.74e-12 60.5
Msa0698080 MtrunA17_Chr1g0157901 53.846 52 24 0 186 237 5 56 9.40e-12 64.3
Msa0698080 MtrunA17_Chr4g0022331 41.379 87 47 2 187 269 566 652 1.00e-11 65.5
Msa0698080 MtrunA17_Chr1g0158311 53.846 52 24 0 186 237 321 372 1.32e-11 65.1
Msa0698080 MtrunA17_Chr1g0158531 43.210 81 40 2 160 237 297 374 1.67e-11 64.7
Msa0698080 MtrunA17_Chr1g0158511 51.923 52 25 0 186 237 311 362 1.68e-11 64.7
Msa0698080 MtrunA17_Chr1g0160631 45.902 61 31 1 232 290 97 157 1.91e-11 62.4
Msa0698080 MtrunA17_Chr1g0157941 57.143 49 21 0 189 237 295 343 2.04e-11 64.3
Msa0698080 MtrunA17_Chr6g0484051 49.153 59 30 0 186 244 382 440 2.38e-11 64.3
Msa0698080 MtrunA17_Chr1g0209501 46.667 60 32 0 187 246 343 402 2.48e-11 63.9
Msa0698080 MtrunA17_Chr6g0467661 55.102 49 22 0 189 237 300 348 2.84e-11 63.9
Msa0698080 MtrunA17_Chr1g0157871 57.143 49 21 0 189 237 297 345 3.17e-11 63.5
Msa0698080 MtrunA17_Chr1g0158481 51.667 60 27 1 232 289 140 199 3.20e-11 62.4
Msa0698080 MtrunA17_Chr1g0158471 55.102 49 22 0 189 237 314 362 3.32e-11 63.5
Msa0698080 MtrunA17_Chr1g0175451 48.276 58 30 0 186 243 362 419 3.65e-11 63.5
Msa0698080 MtrunA17_Chr1g0212821 46.667 60 29 1 232 288 299 358 4.44e-11 62.8
Msa0698080 MtrunA17_Chr1g0212821 48.333 60 30 1 187 245 116 175 4.82e-11 62.8
Msa0698080 MtrunA17_Chr7g0250931 55.769 52 22 1 186 237 582 632 6.17e-11 63.2
Msa0698080 MtrunA17_Chr1g0158771 53.846 52 24 0 186 237 322 373 6.68e-11 62.8
Msa0698080 MtrunA17_Chr1g0158611 50.000 52 26 0 186 237 84 135 7.93e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0698080 AT5G38280.1 35.714 84 54 0 186 269 365 448 2.01e-12 67.8
Msa0698080 AT5G38280.1 48.387 62 28 1 232 289 547 608 3.15e-12 67.4
Msa0698080 AT5G38280.2 35.714 84 54 0 186 269 365 448 2.42e-12 67.8
Msa0698080 AT5G38280.2 48.387 62 28 1 232 289 547 608 3.43e-12 67.0
Msa0698080 AT1G67000.1 44.444 63 35 0 188 250 592 654 4.52e-12 67.0
Msa0698080 AT5G39030.1 52.459 61 25 1 232 288 713 773 6.58e-12 66.2
Msa0698080 AT5G39030.2 52.459 61 25 1 232 288 707 767 6.93e-12 66.2
Msa0698080 AT4G29050.1 34.091 88 58 0 184 271 377 464 8.04e-12 65.9
Msa0698080 AT4G29050.2 34.091 88 58 0 184 271 391 478 8.11e-12 65.9
Msa0698080 AT1G70130.1 32.955 88 59 0 184 271 367 454 1.04e-11 65.9
Msa0698080 AT1G66910.2 47.541 61 32 0 186 246 378 438 1.41e-11 65.5
Msa0698080 AT1G66910.1 47.541 61 32 0 186 246 381 441 1.81e-11 65.1
Msa0698080 AT1G66980.4 44.262 61 34 0 186 246 821 881 1.93e-11 65.1
Msa0698080 AT1G66980.1 44.262 61 34 0 186 246 838 898 1.93e-11 65.1
Msa0698080 AT1G70250.1 51.923 52 25 0 186 237 493 544 2.06e-11 64.7
Msa0698080 AT1G66980.3 44.262 61 34 0 186 246 865 925 2.07e-11 65.1
Msa0698080 AT1G66980.2 44.262 61 34 0 186 246 867 927 2.07e-11 65.1
Msa0698080 AT1G66920.2 48.276 58 30 0 189 246 344 401 5.99e-11 63.2
Msa0698080 AT1G66920.1 48.276 58 30 0 189 246 336 393 6.53e-11 63.2
Msa0698080 AT4G18250.1 33.333 84 56 0 186 269 390 473 9.01e-11 62.8

Find 59 sgRNAs with CRISPR-Local

Find 228 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACAAGATTACTTTGCTAAA+TGG 0.212590 4_4:+68214603 Msa0698080:intron
GTCAATGTGGTGCAATTAAT+TGG 0.230216 4_4:+68214453 Msa0698080:CDS
ATTCATCGAGGGCCGGTCAT+TGG 0.272372 4_4:-68214735 None:intergenic
ACCTAATCATGAAGAATATA+TGG 0.312558 4_4:+68213488 Msa0698080:CDS
ACCATATATTCTTCATGATT+AGG 0.344191 4_4:-68213489 None:intergenic
TGGATCAGGTGGAAGCTATT+GGG 0.349837 4_4:-68214792 None:intergenic
TTCATCGAGGGCCGGTCATT+GGG 0.350816 4_4:-68214734 None:intergenic
TGAAGTCTTGTCCATCGGTT+CGG 0.370019 4_4:-68214395 None:intergenic
GAAGTCTTGTCCATCGGTTC+GGG 0.377519 4_4:-68214394 None:intergenic
AGAGAATGGAAATTGATGAT+AGG 0.442030 4_4:-68213438 None:intergenic
ATGGATTTATGATCAATTTG+AGG 0.446936 4_4:+68214622 Msa0698080:CDS
ATATTCTTCATGATTAGGTT+CGG 0.448191 4_4:-68213484 None:intergenic
ATCAACGAAGTTGCAACCAT+TGG 0.461884 4_4:+68214417 Msa0698080:CDS
ATGATAGGACAGTTATTCTC+AGG 0.487448 4_4:-68213423 None:intergenic
GAAGTGATAGAAATGCTTGA+AGG 0.493798 4_4:+68214758 Msa0698080:CDS
CTGTCTTGCTCACAGCGTAA+TGG 0.495003 4_4:-68213795 None:intergenic
ACAGAGACAAAGACGGAGAC+TGG 0.497209 4_4:+68213814 Msa0698080:CDS
TATATTGTCGCGACTGCTGA+CGG 0.499007 4_4:+68213615 Msa0698080:CDS
GTTCACAGTGAGTACGTGAA+TGG 0.508012 4_4:+68213753 Msa0698080:CDS
TTCATGATTAGGTTCGGTAA+AGG 0.515056 4_4:-68213478 None:intergenic
TACAAATGAAGCCCAATGAC+CGG 0.518243 4_4:+68214723 Msa0698080:CDS
TCAAAATGGCTATGTCGTGC+GGG 0.520488 4_4:+68213106 None:intergenic
TGAATGGAATTGAGTTTCGT+TGG 0.522029 4_4:+68213769 Msa0698080:CDS
GTTGATGAAGTCTTGTCCAT+CGG 0.526164 4_4:-68214400 None:intergenic
ATGAACTCGTAGACGAGAGC+TGG 0.537554 4_4:-68214498 None:intergenic
TAACTCCGGTGATTATGTAA+TGG 0.543618 4_4:-68213398 None:intergenic
TTTCGCCGCCTTTGTAACAC+TGG 0.549294 4_4:+68213140 Msa0698080:CDS
GTCATGCAGAATAGAGATGA+TGG 0.554727 4_4:+68213662 Msa0698080:CDS
GACATTAATTCTGAGAGTTG+TGG 0.555244 4_4:+68213555 Msa0698080:CDS
GACGGAGACTGGTATGGCGA+AGG 0.559547 4_4:+68213825 Msa0698080:CDS
ATCAAAATGGCTATGTCGTG+CGG 0.568132 4_4:+68213105 None:intergenic
GGATCAGGTGGAAGCTATTG+GGG 0.572463 4_4:-68214791 None:intergenic
GACATGACGAATTCTTCCAA+TGG 0.572994 4_4:-68214433 None:intergenic
AAGAAAAGTGACTGCTGCAT+CGG 0.573728 4_4:-68213879 None:intergenic
ATTAATTCTGAGAGTTGTGG+TGG 0.575431 4_4:+68213558 Msa0698080:CDS
GACAAAGACGGAGACTGGTA+TGG 0.578629 4_4:+68213819 Msa0698080:CDS
TGGTGGAAGAATTGACGTGA+AGG 0.580282 4_4:+68213575 Msa0698080:CDS
CACACATACCAGTGTTACAA+AGG 0.585510 4_4:-68213148 None:intergenic
TCATTCCATTACATAATCAC+CGG 0.586235 4_4:+68213393 Msa0698080:CDS
TCTATCACTTCATTCATCGA+GGG 0.589618 4_4:-68214746 None:intergenic
TCACTTCATTCATCGAGGGC+CGG 0.589948 4_4:-68214742 None:intergenic
TTGACCAAGTCCCGAACCGA+TGG 0.597161 4_4:+68214384 Msa0698080:intron
TTCTATCACTTCATTCATCG+AGG 0.606497 4_4:-68214747 None:intergenic
CTGCATCGGCGAGAGTGCAG+CGG 0.615630 4_4:-68213865 None:intergenic
GTCTACGAGTTCATGCCCAA+TGG 0.618308 4_4:+68214507 Msa0698080:CDS
CAAAATGGCTATGTCGTGCG+GGG 0.621169 4_4:+68213107 None:intergenic
TGCAAACAATGTAACAGAGG+AGG 0.622960 4_4:+68214655 Msa0698080:CDS
ACGGAGACTGGTATGGCGAA+GGG 0.623518 4_4:+68213826 Msa0698080:CDS
GAGCAAGACAGAGACAAAGA+CGG 0.635443 4_4:+68213807 Msa0698080:CDS
AAAATGGCTATGTCGTGCGG+GGG 0.643949 4_4:+68213108 None:intergenic
TAATCATGAAGAATATATGG+TGG 0.658942 4_4:+68213491 Msa0698080:CDS
TCGGCGAGAGTGCAGCGGAG+TGG 0.660478 4_4:-68213860 None:intergenic
AAATGGCTATGTCGTGCGGG+GGG 0.661728 4_4:+68213109 None:intergenic
AGATGCAAACAATGTAACAG+AGG 0.665956 4_4:+68214652 Msa0698080:CDS
GGTGGAAGAATTGACGTGAA+GGG 0.680896 4_4:+68213576 Msa0698080:CDS
GGAGGAATTAGAAGCTACAA+CGG 0.692315 4_4:-68213352 None:intergenic
GTTATTCTCAGGACTAACTC+CGG 0.693362 4_4:-68213412 None:intergenic
ACATACCAGTGTTACAAAGG+CGG 0.694014 4_4:-68213145 None:intergenic
AAGAATTCGTCATGTCAATG+TGG 0.774637 4_4:+68214440 Msa0698080:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTGTTTTTATTTACTTTTC+CGG + chr4_4:68213167-68213186 Msa0698080:intron 20.0%
!!! AAACATTTCAAGTATAAGTT+GGG + chr4_4:68214294-68214313 Msa0698080:intron 20.0%
!!! TGTGTTTTTATTTACTTTTC+CGG + chr4_4:68213167-68213186 Msa0698080:intron 20.0%
!!! AAACATTTCAAGTATAAGTT+GGG + chr4_4:68214294-68214313 Msa0698080:intron 20.0%
! AACAAATCTTCATACTCATT+TGG + chr4_4:68213240-68213259 Msa0698080:intron 25.0%
! AATATGCAAAAACAACAACT+CGG + chr4_4:68213293-68213312 Msa0698080:intron 25.0%
! ATATTCTTCATGATTAGGTT+CGG - chr4_4:68213487-68213506 None:intergenic 25.0%
! ACCTAATCATGAAGAATATA+TGG + chr4_4:68213488-68213507 Msa0698080:CDS 25.0%
! ACCATATATTCTTCATGATT+AGG - chr4_4:68213492-68213511 None:intergenic 25.0%
! TAATCATGAAGAATATATGG+TGG + chr4_4:68213491-68213510 Msa0698080:CDS 25.0%
! AAAAAACTGGTAGATCATTA+CGG + chr4_4:68213525-68213544 Msa0698080:CDS 25.0%
! AAAAAGAATGCCTAAACTAT+GGG - chr4_4:68213976-68213995 None:intergenic 25.0%
! AAAAAAGAATGCCTAAACTA+TGG - chr4_4:68213977-68213996 None:intergenic 25.0%
! GCATTTATCTATATATGACA+CGG + chr4_4:68214197-68214216 Msa0698080:intron 25.0%
!! GCATGAAATTATTGTTACTT+TGG - chr4_4:68214236-68214255 None:intergenic 25.0%
! CAACTTATACTTGAAATGTT+TGG - chr4_4:68214295-68214314 None:intergenic 25.0%
!! CAAACATTTCAAGTATAAGT+TGG + chr4_4:68214293-68214312 Msa0698080:intron 25.0%
! ATGGATTTATGATCAATTTG+AGG + chr4_4:68214622-68214641 Msa0698080:CDS 25.0%
! AACAAATCTTCATACTCATT+TGG + chr4_4:68213240-68213259 Msa0698080:intron 25.0%
! AATATGCAAAAACAACAACT+CGG + chr4_4:68213293-68213312 Msa0698080:intron 25.0%
! ATATTCTTCATGATTAGGTT+CGG - chr4_4:68213487-68213506 None:intergenic 25.0%
! ACCTAATCATGAAGAATATA+TGG + chr4_4:68213488-68213507 Msa0698080:CDS 25.0%
! ACCATATATTCTTCATGATT+AGG - chr4_4:68213492-68213511 None:intergenic 25.0%
! TAATCATGAAGAATATATGG+TGG + chr4_4:68213491-68213510 Msa0698080:CDS 25.0%
! AAAAAACTGGTAGATCATTA+CGG + chr4_4:68213525-68213544 Msa0698080:CDS 25.0%
! AAAAAGAATGCCTAAACTAT+GGG - chr4_4:68213976-68213995 None:intergenic 25.0%
! AAAAAAGAATGCCTAAACTA+TGG - chr4_4:68213977-68213996 None:intergenic 25.0%
! GCATTTATCTATATATGACA+CGG + chr4_4:68214197-68214216 Msa0698080:intron 25.0%
!! GCATGAAATTATTGTTACTT+TGG - chr4_4:68214236-68214255 None:intergenic 25.0%
! CAACTTATACTTGAAATGTT+TGG - chr4_4:68214295-68214314 None:intergenic 25.0%
!! CAAACATTTCAAGTATAAGT+TGG + chr4_4:68214293-68214312 Msa0698080:intron 25.0%
! ATGGATTTATGATCAATTTG+AGG + chr4_4:68214622-68214641 Msa0698080:CDS 25.0%
AAGGTTGTTCTACTAAAATG+GGG - chr4_4:68213206-68213225 None:intergenic 30.0%
CAAGGTTGTTCTACTAAAAT+GGG - chr4_4:68213207-68213226 None:intergenic 30.0%
ACAAGGTTGTTCTACTAAAA+TGG - chr4_4:68213208-68213227 None:intergenic 30.0%
!! ATTTTAGTAGAACAACCTTG+TGG + chr4_4:68213207-68213226 Msa0698080:intron 30.0%
TTGTTGAATATGATTCCACA+AGG - chr4_4:68213225-68213244 None:intergenic 30.0%
TCGGTAATATACTTCAACTA+TGG + chr4_4:68213312-68213331 Msa0698080:intron 30.0%
TCATTCCATTACATAATCAC+CGG + chr4_4:68213393-68213412 Msa0698080:CDS 30.0%
! AGAGAATGGAAATTGATGAT+AGG - chr4_4:68213441-68213460 None:intergenic 30.0%
AAAAACTGGTAGATCATTAC+GGG + chr4_4:68213526-68213545 Msa0698080:CDS 30.0%
TATGTTGGAAAATGTGTTCT+TGG + chr4_4:68214129-68214148 Msa0698080:intron 30.0%
ATGTTGGAAAATGTGTTCTT+GGG + chr4_4:68214130-68214149 Msa0698080:intron 30.0%
TTGCTGTCTTGATATGTAAA+TGG + chr4_4:68214166-68214185 Msa0698080:intron 30.0%
TGTTTATCAAGAGAACCATT+GGG - chr4_4:68214525-68214544 None:intergenic 30.0%
CACAAGATTACTTTGCTAAA+TGG + chr4_4:68214603-68214622 Msa0698080:intron 30.0%
AAGGTTGTTCTACTAAAATG+GGG - chr4_4:68213206-68213225 None:intergenic 30.0%
CAAGGTTGTTCTACTAAAAT+GGG - chr4_4:68213207-68213226 None:intergenic 30.0%
ACAAGGTTGTTCTACTAAAA+TGG - chr4_4:68213208-68213227 None:intergenic 30.0%
!! ATTTTAGTAGAACAACCTTG+TGG + chr4_4:68213207-68213226 Msa0698080:intron 30.0%
TTGTTGAATATGATTCCACA+AGG - chr4_4:68213225-68213244 None:intergenic 30.0%
TCGGTAATATACTTCAACTA+TGG + chr4_4:68213312-68213331 Msa0698080:intron 30.0%
TCATTCCATTACATAATCAC+CGG + chr4_4:68213393-68213412 Msa0698080:CDS 30.0%
! AGAGAATGGAAATTGATGAT+AGG - chr4_4:68213441-68213460 None:intergenic 30.0%
AAAAACTGGTAGATCATTAC+GGG + chr4_4:68213526-68213545 Msa0698080:CDS 30.0%
TATGTTGGAAAATGTGTTCT+TGG + chr4_4:68214129-68214148 Msa0698080:intron 30.0%
ATGTTGGAAAATGTGTTCTT+GGG + chr4_4:68214130-68214149 Msa0698080:intron 30.0%
TTGCTGTCTTGATATGTAAA+TGG + chr4_4:68214166-68214185 Msa0698080:intron 30.0%
TGTTTATCAAGAGAACCATT+GGG - chr4_4:68214525-68214544 None:intergenic 30.0%
CACAAGATTACTTTGCTAAA+TGG + chr4_4:68214603-68214622 Msa0698080:intron 30.0%
ATCTTCATACTCATTTGGAC+AGG + chr4_4:68213245-68213264 Msa0698080:intron 35.0%
TCTTCATACTCATTTGGACA+GGG + chr4_4:68213246-68213265 Msa0698080:intron 35.0%
! GAATGATGATGATGATGATG+AGG - chr4_4:68213379-68213398 None:intergenic 35.0%
TAACTCCGGTGATTATGTAA+TGG - chr4_4:68213401-68213420 None:intergenic 35.0%
ATGATAGGACAGTTATTCTC+AGG - chr4_4:68213426-68213445 None:intergenic 35.0%
! TTCATGATTAGGTTCGGTAA+AGG - chr4_4:68213481-68213500 None:intergenic 35.0%
! GACATTAATTCTGAGAGTTG+TGG + chr4_4:68213555-68213574 Msa0698080:CDS 35.0%
! ATTAATTCTGAGAGTTGTGG+TGG + chr4_4:68213558-68213577 Msa0698080:CDS 35.0%
! CAGAATAGAGATGATGGTAA+TGG + chr4_4:68213668-68213687 Msa0698080:intron 35.0%
TGAATGGAATTGAGTTTCGT+TGG + chr4_4:68213769-68213788 Msa0698080:CDS 35.0%
GTAAGTCAGTTGTAAAACAG+TGG - chr4_4:68214010-68214029 None:intergenic 35.0%
! ATTTCTTTTCAGTGATCCCA+TGG + chr4_4:68214106-68214125 Msa0698080:intron 35.0%
! CACATTTTCCAACATACCAT+GGG - chr4_4:68214125-68214144 None:intergenic 35.0%
! ACACATTTTCCAACATACCA+TGG - chr4_4:68214126-68214145 None:intergenic 35.0%
ATCAAGACAGCAATCACAAA+GGG - chr4_4:68214159-68214178 None:intergenic 35.0%
TATCAAGACAGCAATCACAA+AGG - chr4_4:68214160-68214179 None:intergenic 35.0%
!! TGAGAGTAAGAGTATCTGAT+GGG - chr4_4:68214258-68214277 None:intergenic 35.0%
!! TTGAGAGTAAGAGTATCTGA+TGG - chr4_4:68214259-68214278 None:intergenic 35.0%
! TTCAAGTATAAGTTGGGTGA+AGG + chr4_4:68214300-68214319 Msa0698080:intron 35.0%
AAGAATTCGTCATGTCAATG+TGG + chr4_4:68214440-68214459 Msa0698080:CDS 35.0%
GTCAATGTGGTGCAATTAAT+TGG + chr4_4:68214453-68214472 Msa0698080:CDS 35.0%
GTGTTTATCAAGAGAACCAT+TGG - chr4_4:68214526-68214545 None:intergenic 35.0%
! TAAACACACGTTTTCACAAG+AGG + chr4_4:68214539-68214558 Msa0698080:intron 35.0%
AGATGCAAACAATGTAACAG+AGG + chr4_4:68214652-68214671 Msa0698080:CDS 35.0%
TCTATCACTTCATTCATCGA+GGG - chr4_4:68214749-68214768 None:intergenic 35.0%
TTCTATCACTTCATTCATCG+AGG - chr4_4:68214750-68214769 None:intergenic 35.0%
GAAGTGATAGAAATGCTTGA+AGG + chr4_4:68214758-68214777 Msa0698080:CDS 35.0%
ATCTTCATACTCATTTGGAC+AGG + chr4_4:68213245-68213264 Msa0698080:intron 35.0%
TCTTCATACTCATTTGGACA+GGG + chr4_4:68213246-68213265 Msa0698080:intron 35.0%
! GAATGATGATGATGATGATG+AGG - chr4_4:68213379-68213398 None:intergenic 35.0%
TAACTCCGGTGATTATGTAA+TGG - chr4_4:68213401-68213420 None:intergenic 35.0%
ATGATAGGACAGTTATTCTC+AGG - chr4_4:68213426-68213445 None:intergenic 35.0%
! TTCATGATTAGGTTCGGTAA+AGG - chr4_4:68213481-68213500 None:intergenic 35.0%
! GACATTAATTCTGAGAGTTG+TGG + chr4_4:68213555-68213574 Msa0698080:CDS 35.0%
! ATTAATTCTGAGAGTTGTGG+TGG + chr4_4:68213558-68213577 Msa0698080:CDS 35.0%
! CAGAATAGAGATGATGGTAA+TGG + chr4_4:68213668-68213687 Msa0698080:intron 35.0%
TGAATGGAATTGAGTTTCGT+TGG + chr4_4:68213769-68213788 Msa0698080:CDS 35.0%
GTAAGTCAGTTGTAAAACAG+TGG - chr4_4:68214010-68214029 None:intergenic 35.0%
! ATTTCTTTTCAGTGATCCCA+TGG + chr4_4:68214106-68214125 Msa0698080:intron 35.0%
! CACATTTTCCAACATACCAT+GGG - chr4_4:68214125-68214144 None:intergenic 35.0%
! ACACATTTTCCAACATACCA+TGG - chr4_4:68214126-68214145 None:intergenic 35.0%
ATCAAGACAGCAATCACAAA+GGG - chr4_4:68214159-68214178 None:intergenic 35.0%
TATCAAGACAGCAATCACAA+AGG - chr4_4:68214160-68214179 None:intergenic 35.0%
!! TGAGAGTAAGAGTATCTGAT+GGG - chr4_4:68214258-68214277 None:intergenic 35.0%
!! TTGAGAGTAAGAGTATCTGA+TGG - chr4_4:68214259-68214278 None:intergenic 35.0%
! TTCAAGTATAAGTTGGGTGA+AGG + chr4_4:68214300-68214319 Msa0698080:intron 35.0%
AAGAATTCGTCATGTCAATG+TGG + chr4_4:68214440-68214459 Msa0698080:CDS 35.0%
GTCAATGTGGTGCAATTAAT+TGG + chr4_4:68214453-68214472 Msa0698080:CDS 35.0%
GTGTTTATCAAGAGAACCAT+TGG - chr4_4:68214526-68214545 None:intergenic 35.0%
! TAAACACACGTTTTCACAAG+AGG + chr4_4:68214539-68214558 Msa0698080:intron 35.0%
AGATGCAAACAATGTAACAG+AGG + chr4_4:68214652-68214671 Msa0698080:CDS 35.0%
TCTATCACTTCATTCATCGA+GGG - chr4_4:68214749-68214768 None:intergenic 35.0%
TTCTATCACTTCATTCATCG+AGG - chr4_4:68214750-68214769 None:intergenic 35.0%
GAAGTGATAGAAATGCTTGA+AGG + chr4_4:68214758-68214777 Msa0698080:CDS 35.0%
ACATACCAGTGTTACAAAGG+CGG - chr4_4:68213148-68213167 None:intergenic 40.0%
CACACATACCAGTGTTACAA+AGG - chr4_4:68213151-68213170 None:intergenic 40.0%
CTTCATACTCATTTGGACAG+GGG + chr4_4:68213247-68213266 Msa0698080:intron 40.0%
GGAGGAATTAGAAGCTACAA+CGG - chr4_4:68213355-68213374 None:intergenic 40.0%
! TGATGATGATGATGATGAGG+AGG - chr4_4:68213376-68213395 None:intergenic 40.0%
GTTATTCTCAGGACTAACTC+CGG - chr4_4:68213415-68213434 None:intergenic 40.0%
! CGTTTTCGTATGGAAGAGAA+TGG - chr4_4:68213455-68213474 None:intergenic 40.0%
! GTAAAGGAGACGTTTTCGTA+TGG - chr4_4:68213465-68213484 None:intergenic 40.0%
GGTTGTGAGATGCAAAAAAC+TGG + chr4_4:68213512-68213531 Msa0698080:CDS 40.0%
GTCATGCAGAATAGAGATGA+TGG + chr4_4:68213662-68213681 Msa0698080:CDS 40.0%
CTTTCCATATTTCCACCTAC+TGG - chr4_4:68213694-68213713 None:intergenic 40.0%
CAGTAGGTGGAAATATGGAA+AGG + chr4_4:68213692-68213711 Msa0698080:intron 40.0%
AAGCAAGTGAGAATATCGCA+AGG + chr4_4:68213731-68213750 Msa0698080:intron 40.0%
AAGAAAAGTGACTGCTGCAT+CGG - chr4_4:68213882-68213901 None:intergenic 40.0%
!!! GCAGTCACTTTTCTTGCTAT+CGG + chr4_4:68213887-68213906 Msa0698080:CDS 40.0%
AATGCCTAAACTATGGGTGA+GGG - chr4_4:68213970-68213989 None:intergenic 40.0%
! AAGTATAAGTTGGGTGAAGG+AGG + chr4_4:68214303-68214322 Msa0698080:intron 40.0%
! GTTGATGAAGTCTTGTCCAT+CGG - chr4_4:68214403-68214422 None:intergenic 40.0%
ATCAACGAAGTTGCAACCAT+TGG + chr4_4:68214417-68214436 Msa0698080:CDS 40.0%
GACATGACGAATTCTTCCAA+TGG - chr4_4:68214436-68214455 None:intergenic 40.0%
TGCAAACAATGTAACAGAGG+AGG + chr4_4:68214655-68214674 Msa0698080:CDS 40.0%
TACAAATGAAGCCCAATGAC+CGG + chr4_4:68214723-68214742 Msa0698080:CDS 40.0%
ACATACCAGTGTTACAAAGG+CGG - chr4_4:68213148-68213167 None:intergenic 40.0%
CACACATACCAGTGTTACAA+AGG - chr4_4:68213151-68213170 None:intergenic 40.0%
CTTCATACTCATTTGGACAG+GGG + chr4_4:68213247-68213266 Msa0698080:intron 40.0%
GGAGGAATTAGAAGCTACAA+CGG - chr4_4:68213355-68213374 None:intergenic 40.0%
! TGATGATGATGATGATGAGG+AGG - chr4_4:68213376-68213395 None:intergenic 40.0%
GTTATTCTCAGGACTAACTC+CGG - chr4_4:68213415-68213434 None:intergenic 40.0%
! CGTTTTCGTATGGAAGAGAA+TGG - chr4_4:68213455-68213474 None:intergenic 40.0%
! GTAAAGGAGACGTTTTCGTA+TGG - chr4_4:68213465-68213484 None:intergenic 40.0%
GGTTGTGAGATGCAAAAAAC+TGG + chr4_4:68213512-68213531 Msa0698080:CDS 40.0%
GTCATGCAGAATAGAGATGA+TGG + chr4_4:68213662-68213681 Msa0698080:CDS 40.0%
CTTTCCATATTTCCACCTAC+TGG - chr4_4:68213694-68213713 None:intergenic 40.0%
CAGTAGGTGGAAATATGGAA+AGG + chr4_4:68213692-68213711 Msa0698080:intron 40.0%
AAGCAAGTGAGAATATCGCA+AGG + chr4_4:68213731-68213750 Msa0698080:intron 40.0%
AAGAAAAGTGACTGCTGCAT+CGG - chr4_4:68213882-68213901 None:intergenic 40.0%
!!! GCAGTCACTTTTCTTGCTAT+CGG + chr4_4:68213887-68213906 Msa0698080:CDS 40.0%
AATGCCTAAACTATGGGTGA+GGG - chr4_4:68213970-68213989 None:intergenic 40.0%
! AAGTATAAGTTGGGTGAAGG+AGG + chr4_4:68214303-68214322 Msa0698080:intron 40.0%
! GTTGATGAAGTCTTGTCCAT+CGG - chr4_4:68214403-68214422 None:intergenic 40.0%
ATCAACGAAGTTGCAACCAT+TGG + chr4_4:68214417-68214436 Msa0698080:CDS 40.0%
GACATGACGAATTCTTCCAA+TGG - chr4_4:68214436-68214455 None:intergenic 40.0%
TGCAAACAATGTAACAGAGG+AGG + chr4_4:68214655-68214674 Msa0698080:CDS 40.0%
TACAAATGAAGCCCAATGAC+CGG + chr4_4:68214723-68214742 Msa0698080:CDS 40.0%
! TGATGATGATGATGAGGAGG+AGG - chr4_4:68213373-68213392 None:intergenic 45.0%
TGGTGGAAGAATTGACGTGA+AGG + chr4_4:68213575-68213594 Msa0698080:CDS 45.0%
GGTGGAAGAATTGACGTGAA+GGG + chr4_4:68213576-68213595 Msa0698080:CDS 45.0%
TATATTGTCGCGACTGCTGA+CGG + chr4_4:68213615-68213634 Msa0698080:CDS 45.0%
!! AGATGATGGTAATGGCCAGT+AGG + chr4_4:68213676-68213695 Msa0698080:intron 45.0%
ATGGCCAGTAGGTGGAAATA+TGG + chr4_4:68213687-68213706 Msa0698080:intron 45.0%
GTTCACAGTGAGTACGTGAA+TGG + chr4_4:68213753-68213772 Msa0698080:CDS 45.0%
GAGCAAGACAGAGACAAAGA+CGG + chr4_4:68213807-68213826 Msa0698080:CDS 45.0%
TACTCCCTCACCCATAGTTT+AGG + chr4_4:68213963-68213982 Msa0698080:intron 45.0%
GAATGCCTAAACTATGGGTG+AGG - chr4_4:68213971-68213990 None:intergenic 45.0%
TCAGTGATCCCATGGTATGT+TGG + chr4_4:68214114-68214133 Msa0698080:intron 45.0%
! TTTACGAAGGAGAGCTCTGA+AGG + chr4_4:68214337-68214356 Msa0698080:intron 45.0%
! TGAAGTCTTGTCCATCGGTT+CGG - chr4_4:68214398-68214417 None:intergenic 45.0%
! CACACGTTTTCACAAGAGGA+AGG + chr4_4:68214543-68214562 Msa0698080:intron 45.0%
! TGATGATGATGATGAGGAGG+AGG - chr4_4:68213373-68213392 None:intergenic 45.0%
TGGTGGAAGAATTGACGTGA+AGG + chr4_4:68213575-68213594 Msa0698080:CDS 45.0%
GGTGGAAGAATTGACGTGAA+GGG + chr4_4:68213576-68213595 Msa0698080:CDS 45.0%
TATATTGTCGCGACTGCTGA+CGG + chr4_4:68213615-68213634 Msa0698080:CDS 45.0%
!! AGATGATGGTAATGGCCAGT+AGG + chr4_4:68213676-68213695 Msa0698080:intron 45.0%
ATGGCCAGTAGGTGGAAATA+TGG + chr4_4:68213687-68213706 Msa0698080:intron 45.0%
GTTCACAGTGAGTACGTGAA+TGG + chr4_4:68213753-68213772 Msa0698080:CDS 45.0%
GAGCAAGACAGAGACAAAGA+CGG + chr4_4:68213807-68213826 Msa0698080:CDS 45.0%
TACTCCCTCACCCATAGTTT+AGG + chr4_4:68213963-68213982 Msa0698080:intron 45.0%
GAATGCCTAAACTATGGGTG+AGG - chr4_4:68213971-68213990 None:intergenic 45.0%
TCAGTGATCCCATGGTATGT+TGG + chr4_4:68214114-68214133 Msa0698080:intron 45.0%
! TTTACGAAGGAGAGCTCTGA+AGG + chr4_4:68214337-68214356 Msa0698080:intron 45.0%
! TGAAGTCTTGTCCATCGGTT+CGG - chr4_4:68214398-68214417 None:intergenic 45.0%
! CACACGTTTTCACAAGAGGA+AGG + chr4_4:68214543-68214562 Msa0698080:intron 45.0%
TTTCGCCGCCTTTGTAACAC+TGG + chr4_4:68213140-68213159 Msa0698080:CDS 50.0%
ATGGGGCATAAAACACGTGC+CGG - chr4_4:68213189-68213208 None:intergenic 50.0%
!! TGATGGTAATGGCCAGTAGG+TGG + chr4_4:68213679-68213698 Msa0698080:intron 50.0%
CTGTCTTGCTCACAGCGTAA+TGG - chr4_4:68213798-68213817 None:intergenic 50.0%
ACAGAGACAAAGACGGAGAC+TGG + chr4_4:68213814-68213833 Msa0698080:CDS 50.0%
GACAAAGACGGAGACTGGTA+TGG + chr4_4:68213819-68213838 Msa0698080:CDS 50.0%
CTATGGGTGAGGGAGTAACT+TGG - chr4_4:68213960-68213979 None:intergenic 50.0%
AAGTTGGGTGAAGGAGGCTA+CGG + chr4_4:68214309-68214328 Msa0698080:intron 50.0%
GGCTACGGTTCTGTTTACGA+AGG + chr4_4:68214324-68214343 Msa0698080:intron 50.0%
!! GAAGTCTTGTCCATCGGTTC+GGG - chr4_4:68214397-68214416 None:intergenic 50.0%
ATGAACTCGTAGACGAGAGC+TGG - chr4_4:68214501-68214520 None:intergenic 50.0%
GTCTACGAGTTCATGCCCAA+TGG + chr4_4:68214507-68214526 Msa0698080:CDS 50.0%
TCACTTCATTCATCGAGGGC+CGG - chr4_4:68214745-68214764 None:intergenic 50.0%
TTTCGCCGCCTTTGTAACAC+TGG + chr4_4:68213140-68213159 Msa0698080:CDS 50.0%
ATGGGGCATAAAACACGTGC+CGG - chr4_4:68213189-68213208 None:intergenic 50.0%
!! TGATGGTAATGGCCAGTAGG+TGG + chr4_4:68213679-68213698 Msa0698080:intron 50.0%
CTGTCTTGCTCACAGCGTAA+TGG - chr4_4:68213798-68213817 None:intergenic 50.0%
ACAGAGACAAAGACGGAGAC+TGG + chr4_4:68213814-68213833 Msa0698080:CDS 50.0%
GACAAAGACGGAGACTGGTA+TGG + chr4_4:68213819-68213838 Msa0698080:CDS 50.0%
CTATGGGTGAGGGAGTAACT+TGG - chr4_4:68213960-68213979 None:intergenic 50.0%
AAGTTGGGTGAAGGAGGCTA+CGG + chr4_4:68214309-68214328 Msa0698080:intron 50.0%
GGCTACGGTTCTGTTTACGA+AGG + chr4_4:68214324-68214343 Msa0698080:intron 50.0%
!! GAAGTCTTGTCCATCGGTTC+GGG - chr4_4:68214397-68214416 None:intergenic 50.0%
ATGAACTCGTAGACGAGAGC+TGG - chr4_4:68214501-68214520 None:intergenic 50.0%
GTCTACGAGTTCATGCCCAA+TGG + chr4_4:68214507-68214526 Msa0698080:CDS 50.0%
TCACTTCATTCATCGAGGGC+CGG - chr4_4:68214745-68214764 None:intergenic 50.0%
ACGGAGACTGGTATGGCGAA+GGG + chr4_4:68213826-68213845 Msa0698080:CDS 55.0%
TTGACCAAGTCCCGAACCGA+TGG + chr4_4:68214384-68214403 Msa0698080:intron 55.0%
!! TTGTCCATCGGTTCGGGACT+TGG - chr4_4:68214391-68214410 None:intergenic 55.0%
TTCATCGAGGGCCGGTCATT+GGG - chr4_4:68214737-68214756 None:intergenic 55.0%
ATTCATCGAGGGCCGGTCAT+TGG - chr4_4:68214738-68214757 None:intergenic 55.0%
ACGGAGACTGGTATGGCGAA+GGG + chr4_4:68213826-68213845 Msa0698080:CDS 55.0%
TTGACCAAGTCCCGAACCGA+TGG + chr4_4:68214384-68214403 Msa0698080:intron 55.0%
!! TTGTCCATCGGTTCGGGACT+TGG - chr4_4:68214391-68214410 None:intergenic 55.0%
TTCATCGAGGGCCGGTCATT+GGG - chr4_4:68214737-68214756 None:intergenic 55.0%
ATTCATCGAGGGCCGGTCAT+TGG - chr4_4:68214738-68214757 None:intergenic 55.0%
GACGGAGACTGGTATGGCGA+AGG + chr4_4:68213825-68213844 Msa0698080:CDS 60.0%
GACGGAGACTGGTATGGCGA+AGG + chr4_4:68213825-68213844 Msa0698080:CDS 60.0%
! CTGCATCGGCGAGAGTGCAG+CGG - chr4_4:68213868-68213887 None:intergenic 65.0%
! CTGCATCGGCGAGAGTGCAG+CGG - chr4_4:68213868-68213887 None:intergenic 65.0%
! TCGGCGAGAGTGCAGCGGAG+TGG - chr4_4:68213863-68213882 None:intergenic 70.0%
! TCGGCGAGAGTGCAGCGGAG+TGG - chr4_4:68213863-68213882 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 68213111 68214799 68213111 ID=Msa0698080;Name=Msa0698080
chr4_4 mRNA 68213111 68214799 68213111 ID=Msa0698080-mRNA-1;Parent=Msa0698080;Name=Msa0698080-mRNA-1;_AED=0.22;_eAED=0.24;_QI=0|0|0|1|1|1|5|0|293
chr4_4 exon 68213111 68213165 68213111 ID=Msa0698080-mRNA-1:exon:20272;Parent=Msa0698080-mRNA-1
chr4_4 exon 68213349 68213683 68213349 ID=Msa0698080-mRNA-1:exon:20273;Parent=Msa0698080-mRNA-1
chr4_4 exon 68213753 68213917 68213753 ID=Msa0698080-mRNA-1:exon:20274;Parent=Msa0698080-mRNA-1
chr4_4 exon 68214393 68214528 68214393 ID=Msa0698080-mRNA-1:exon:20275;Parent=Msa0698080-mRNA-1
chr4_4 exon 68214609 68214799 68214609 ID=Msa0698080-mRNA-1:exon:20276;Parent=Msa0698080-mRNA-1
chr4_4 CDS 68213111 68213165 68213111 ID=Msa0698080-mRNA-1:cds;Parent=Msa0698080-mRNA-1
chr4_4 CDS 68213349 68213683 68213349 ID=Msa0698080-mRNA-1:cds;Parent=Msa0698080-mRNA-1
chr4_4 CDS 68213753 68213917 68213753 ID=Msa0698080-mRNA-1:cds;Parent=Msa0698080-mRNA-1
chr4_4 CDS 68214393 68214528 68214393 ID=Msa0698080-mRNA-1:cds;Parent=Msa0698080-mRNA-1
chr4_4 CDS 68214609 68214799 68214609 ID=Msa0698080-mRNA-1:cds;Parent=Msa0698080-mRNA-1
Gene Sequence

>Msa0698080

ATGGCTATGTCGTGCGGGGGGCTAATCATTTTCGCCGCCTTTGTAACACTGGTATACACCGTTGTAGCTTCTAATTCCTCCTCCTCATCATCATCATCATCATTCCATTACATAATCACCGGAGTTAGTCCTGAGAATAACTGTCCTATCATCAATTTCCATTCTCTTCCATACGAAAACGTCTCCTTTACCGAACCTAATCATGAAGAATATATGGTGGTTGTGAGATGCAAAAAACTGGTAGATCATTACGGGTATATAGACATTAATTCTGAGAGTTGTGGTGGAAGAATTGACGTGAAGGGAAAGCAATGTTATTCATATATTGTCGCGACTGCTGACGGAAAATTTGTGTCAGACATAGAAGAGTCATGCAGAATAGAGATGATGGTTCACAGTGAGTACGTGAATGGAATTGAGTTTCGTTGGCGACCATTACGCTGTGAGCAAGACAGAGACAAAGACGGAGACTGGTATGGCGAAGGGAACAATAATTACCACTCCGCTGCACTCTCGCCGATGCAGCAGTCACTTTTCTTGCTATCGGATCACTTCTCCCGAACCGATGGACAAGACTTCATCAACGAAGTTGCAACCATTGGAAGAATTCGTCATGTCAATGTGGTGCAATTAATTGGATTTTGTGCTGAAAGAACAAAGCCAGCTCTCGTCTACGAGTTCATGCCCAATGATTACTTTGCTAAATGGATTTATGATCAATTTGAGGAAACAATAGATGCAAACAATGTAACAGAGGAGGAAAAGAATATTGCAATGAAGATGATCGTCATTGCAGCGAAATGCATACAAATGAAGCCCAATGACCGGCCCTCGATGAATGAAGTGATAGAAATGCTTGAAGGAGATGAAGTGCCCCAATAG
Protein sequence

>Msa0698080

MAMSCGGLIIFAAFVTLVYTVVASNSSSSSSSSSFHYIITGVSPENNCPIINFHSLPYENVSFTEPNHEEYMVVVRCKKLVDHYGYIDINSESCGGRIDVKGKQCYSYIVATADGKFVSDIEESCRIEMMVHSEYVNGIEFRWRPLRCEQDRDKDGDWYGEGNNNYHSAALSPMQQSLFLLSDHFSRTDGQDFINEVATIGRIRHVNVVQLIGFCAERTKPALVYEFMPNDYFAKWIYDQFEETIDANNVTEEEKNIAMKMIVIAAKCIQMKPNDRPSMNEVIEMLEGDEVPQ*