AlfalfaGEDB | Msa0698960

M. sativa cultivar zhongmu-4 / Msa0698960

KEGG: K10592
GO: GO:0000151 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005829 GO:0005911 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0030054 GO:0032446 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0055044 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1902494 GO:1990234
PFAM: PF06012.15

Nr:

Show entries

Search:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0698960	XP_024638067.1	97.889	3742	70	3	1	3738	1	3737	0.0	7535

Showing 1 to 1 of 1 entries

Previous1Next

Swissprot:

Show entries

Search:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0698960	sp\|Q8GY23\|UPL1_ARATH	61.415	3802	1282	55	1	3738	1	3681	0.0	4314

Showing 1 to 1 of 1 entries

Previous1Next

Trembl:

Show entries

Search:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0698960	A0A072UQW1	97.889	3742	70	3	1	3738	1	3737	0.0	7535

Showing 1 to 1 of 1 entries

Previous1Next

TFs/TRs:

Show entries

Search:

Gene ID	Type	Classification
No data available in table

Showing 0 to 0 of 0 entries

PreviousNext

Protein Kinases:

Show entries

Search:

Gene ID	Type	Classification
No data available in table

Showing 0 to 0 of 0 entries

PreviousNext

Network:

Co-expression Network

Show entries

Search:

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0014170	Msa0698960	0.848979	4.340493e-60	-8.615850e-47
Msa0026240	Msa0698960	0.800861	1.181570e-48	-8.615850e-47
Msa0107710	Msa0698960	0.833823	4.272704e-56	-8.615850e-47
Msa0107780	Msa0698960	0.805535	1.273914e-49	-8.615850e-47
Msa0143820	Msa0698960	0.844779	6.117543e-59	-8.615850e-47
Msa0379580	Msa0698960	0.845735	3.372977e-59	-8.615850e-47
Msa0379660	Msa0698960	0.802690	4.978172e-49	-8.615850e-47
Msa0387520	Msa0698960	0.804594	2.004270e-49	-8.615850e-47
Msa0428910	Msa0698960	0.826064	3.329937e-54	-8.615850e-47
Msa0541900	Msa0698960	0.801984	6.955264e-49	-8.615850e-47

Showing 1 to 10 of 24 entries

Previous1 2 3Next

PPI

Show entries

Search:

Gene1	Gene2	Type
No data available in table

Showing 0 to 0 of 0 entries

PreviousNext

Show entries

Search:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0698960	MtrunA17_Chr4g0052551	97.889	3742	70	3	1	3738	1	3737	0.0	7535
Msa0698960	MtrunA17_Chr4g0052561	86.562	3773	457	13	1	3738	1	3758	0.0	6504
Msa0698960	MtrunA17_Chr5g0427791	58.385	1127	414	17	2633	3738	2563	3655	0.0	1253
Msa0698960	MtrunA17_Chr5g0427791	36.987	2144	1165	49	10	2053	31	2088	0.0	1161
Msa0698960	MtrunA17_Chr3g0132611	56.640	1137	428	20	2629	3738	2563	3661	0.0	1192
Msa0698960	MtrunA17_Chr3g0132611	37.189	2092	1132	50	10	2012	31	2029	0.0	1149
Msa0698960	MtrunA17_Chr2g0293841	37.255	408	230	13	3343	3735	625	1021	1.63e-65	244
Msa0698960	MtrunA17_Chr7g0265431	34.135	416	233	14	3348	3735	743	1145	4.85e-53	206
Msa0698960	MtrunA17_Chr4g0075761	32.884	371	223	10	3380	3738	523	879	8.73e-49	191
Msa0698960	MtrunA17_Chr2g0289951	30.877	285	176	7	3449	3724	15	287	3.64e-34	135

Showing 1 to 10 of 16 entries

Previous1 2Next

Show entries

Search:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0698960	AT1G55860.1	61.415	3802	1282	55	1	3738	1	3681	0.0	4314
Msa0698960	AT1G70320.1	60.679	3802	1287	54	1	3738	1	3658	0.0	4251
Msa0698960	AT3G17205.2	37.255	408	230	13	3343	3735	616	1012	3.98e-67	249
Msa0698960	AT3G17205.1	37.255	408	230	13	3343	3735	630	1026	4.41e-67	249
Msa0698960	AT3G17205.3	37.255	408	230	13	3343	3735	630	1026	4.41e-67	249
Msa0698960	AT3G53090.1	32.701	422	243	13	3342	3735	731	1139	1.13e-54	212
Msa0698960	AT3G53090.2	32.701	422	243	13	3342	3735	731	1139	1.13e-54	212
Msa0698960	AT4G12570.1	31.351	370	228	9	3380	3736	515	871	1.02e-44	178
Msa0698960	AT5G02880.1	28.033	478	276	13	3316	3735	1032	1499	3.26e-36	152
Msa0698960	AT5G02880.2	27.826	460	264	13	3316	3717	1032	1481	3.04e-32	139

Showing 1 to 10 of 13 entries

Previous1 2Next

Find 900 sgRNAs with CRISPR-Local

Find 1356 sgRNAs with CRISPR-GE

CRISPR-Local

Show entries

Search:

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAAACAACATGTCCCTGCTG+TGG	0.707104	4_4:-69479307	Msa0698960:CDS
AAAACCCATCTCAACAATAG+TGG	0.474994	4_4:+69480172	None:intergenic
AAAACCTCTGCTTGAATATC+TGG	0.303298	4_4:+69475967	None:intergenic
AAAAGTCTTTGTGTTCCAGG+AGG	0.701651	4_4:+69473703	None:intergenic
AAAAGTGGCGAAAGTGTCCA+GGG	0.617907	4_4:+69483658	None:intergenic
AAAATGTAGATATCTTGGGA+AGG	0.664461	4_4:-69480789	Msa0698960:CDS
AAAATTATACATAAGCACTG+AGG	0.749103	4_4:+69482435	None:intergenic
AAACAGAGTTAGGGTTTGGT+TGG	0.448465	4_4:+69473098	None:intergenic
AAACATTTGGTTGCCCTGAT+TGG	0.371639	4_4:+69476238	None:intergenic
AAACCCTTTGGAGCTCATGC+AGG	0.453353	4_4:-69474718	Msa0698960:CDS

Showing 1 to 10 of 900 entries

Previous1 2 3 4 5…90Next

CRISPR-GE

Show entries

Search:

sgRNA_sequence	Strand	Position	Region	GC_content
AAAGAAAAGAGAAGAGAAGA+AGG	+	chr4_4:69468646-69468665	None:intergenic	30.0%
TCAATTCCCAAAACCTAAAA+TGG	+	chr4_4:69468810-69468829	None:intergenic	30.0%
TAATGAAGTTGTAATTGCTG+TGG	-	chr4_4:69469022-69469041	Msa0698960:three_prime_UTR	30.0%
TAACTAAGTTGTAATTGCTG+TGG	-	chr4_4:69469062-69469081	Msa0698960:three_prime_UTR	30.0%
AATTTCAATCCATGCAACAA+AGG	+	chr4_4:69469179-69469198	None:intergenic	30.0%
GATTGTGGAGAATTTCTTAT+TGG	+	chr4_4:69469502-69469521	None:intergenic	30.0%
CTTAGATAATCATCTTAAGC+TGG	-	chr4_4:69469521-69469540	Msa0698960:CDS	30.0%
GACAATACAACTTATGCTTA+AGG	+	chr4_4:69470339-69470358	None:intergenic	30.0%
CAGTTTCAGTTGTTTGTATA+TGG	-	chr4_4:69470369-69470388	Msa0698960:intron	30.0%
TCCCATACAAAGTTGTTTAA+AGG	+	chr4_4:69470619-69470638	None:intergenic	30.0%

Showing 1 to 10 of 1,356 entries

Previous1 2 3 4 5…136Next

Chromosome	Type	Strat	End	Strand	Name
chr4_4	gene	69468641	69486317	69468641	ID=Msa0698960;Name=Msa0698960
chr4_4	mRNA	69468641	69486317	69468641	ID=Msa0698960-mRNA-1;Parent=Msa0698960;Name=Msa0698960-mRNA-1;_AED=0.02;_eAED=0.02;_QI=240\|1\|1\|1\|0.86\|0.81\|16\|630\|3738
chr4_4	exon	69468641	69468898	69468641	ID=Msa0698960-mRNA-1:exon:20823;Parent=Msa0698960-mRNA-1
chr4_4	exon	69468936	69469207	69468936	ID=Msa0698960-mRNA-1:exon:20822;Parent=Msa0698960-mRNA-1
chr4_4	exon	69469353	69469555	69469353	ID=Msa0698960-mRNA-1:exon:20821;Parent=Msa0698960-mRNA-1
chr4_4	exon	69469673	69469779	69469673	ID=Msa0698960-mRNA-1:exon:20820;Parent=Msa0698960-mRNA-1
chr4_4	exon	69471441	69471580	69471441	ID=Msa0698960-mRNA-1:exon:20819;Parent=Msa0698960-mRNA-1
chr4_4	exon	69471655	69471880	69471655	ID=Msa0698960-mRNA-1:exon:20818;Parent=Msa0698960-mRNA-1
chr4_4	exon	69472047	69472127	69472047	ID=Msa0698960-mRNA-1:exon:20817;Parent=Msa0698960-mRNA-1
chr4_4	exon	69472716	69472862	69472716	ID=Msa0698960-mRNA-1:exon:20816;Parent=Msa0698960-mRNA-1
chr4_4	exon	69473054	69474185	69473054	ID=Msa0698960-mRNA-1:exon:20815;Parent=Msa0698960-mRNA-1
chr4_4	exon	69474364	69474922	69474364	ID=Msa0698960-mRNA-1:exon:20814;Parent=Msa0698960-mRNA-1
chr4_4	exon	69475022	69475223	69475022	ID=Msa0698960-mRNA-1:exon:20813;Parent=Msa0698960-mRNA-1
chr4_4	exon	69475454	69475765	69475454	ID=Msa0698960-mRNA-1:exon:20812;Parent=Msa0698960-mRNA-1
chr4_4	exon	69475861	69483732	69475861	ID=Msa0698960-mRNA-1:exon:20811;Parent=Msa0698960-mRNA-1
chr4_4	exon	69483982	69484188	69483982	ID=Msa0698960-mRNA-1:exon:20810;Parent=Msa0698960-mRNA-1
chr4_4	exon	69484310	69484405	69484310	ID=Msa0698960-mRNA-1:exon:20809;Parent=Msa0698960-mRNA-1
chr4_4	exon	69486045	69486317	69486045	ID=Msa0698960-mRNA-1:exon:20808;Parent=Msa0698960-mRNA-1
chr4_4	five_prime_UTR	69486078	69486317	69486078	ID=Msa0698960-mRNA-1:five_prime_utr;Parent=Msa0698960-mRNA-1
chr4_4	CDS	69486045	69486077	69486045	ID=Msa0698960-mRNA-1:cds;Parent=Msa0698960-mRNA-1
chr4_4	CDS	69484310	69484405	69484310	ID=Msa0698960-mRNA-1:cds;Parent=Msa0698960-mRNA-1
chr4_4	CDS	69483982	69484188	69483982	ID=Msa0698960-mRNA-1:cds;Parent=Msa0698960-mRNA-1
chr4_4	CDS	69475861	69483732	69475861	ID=Msa0698960-mRNA-1:cds;Parent=Msa0698960-mRNA-1
chr4_4	CDS	69475454	69475765	69475454	ID=Msa0698960-mRNA-1:cds;Parent=Msa0698960-mRNA-1
chr4_4	CDS	69475022	69475223	69475022	ID=Msa0698960-mRNA-1:cds;Parent=Msa0698960-mRNA-1
chr4_4	CDS	69474364	69474922	69474364	ID=Msa0698960-mRNA-1:cds;Parent=Msa0698960-mRNA-1
chr4_4	CDS	69473054	69474185	69473054	ID=Msa0698960-mRNA-1:cds;Parent=Msa0698960-mRNA-1
chr4_4	CDS	69472716	69472862	69472716	ID=Msa0698960-mRNA-1:cds;Parent=Msa0698960-mRNA-1
chr4_4	CDS	69472047	69472127	69472047	ID=Msa0698960-mRNA-1:cds;Parent=Msa0698960-mRNA-1
chr4_4	CDS	69471655	69471880	69471655	ID=Msa0698960-mRNA-1:cds;Parent=Msa0698960-mRNA-1
chr4_4	CDS	69471441	69471580	69471441	ID=Msa0698960-mRNA-1:cds;Parent=Msa0698960-mRNA-1
chr4_4	CDS	69469673	69469779	69469673	ID=Msa0698960-mRNA-1:cds;Parent=Msa0698960-mRNA-1
chr4_4	CDS	69469453	69469555	69469453	ID=Msa0698960-mRNA-1:cds;Parent=Msa0698960-mRNA-1
chr4_4	three_prime_UTR	69469353	69469452	69469353	ID=Msa0698960-mRNA-1:three_prime_utr;Parent=Msa0698960-mRNA-1
chr4_4	three_prime_UTR	69468936	69469207	69468936	ID=Msa0698960-mRNA-1:three_prime_utr;Parent=Msa0698960-mRNA-1
chr4_4	three_prime_UTR	69468641	69468898	69468641	ID=Msa0698960-mRNA-1:three_prime_utr;Parent=Msa0698960-mRNA-1

Gene Sequence

>Msa0698960

ATGAGGTTAAAGAGAAAACGTGCACTCGAAGTGCCTCCAAAAATTAGATGCTTCATCAACTGTGTTACCGCAGTTCCACTTGAAAACATACAAGAACCTTTAAACAACTTTGTATGGGAGTTTGATAAGGGAGACTTTCATCACTGGGCTGATCTTTTTAATCATTTTGATTCATTCTTTGAGAAGTATGTAAAACCAAGAAAGGATCTGCAAGTTGATGACGGTTTTTTGGACTCGGATCCTCCTTTCCCAAAAGAAGCCGTTCTTCAAATTCTTCGTGTCATTAGAATAATTTTGGATAATTGCCCAAATAAGCATTTCTACAGTTCATACGAGCAACATCTTTCATTATTGCTTGCTTCTACTGATCCAGACGTGGTTGAGGCTACCCTGGACACTTTCGCCACTTTTTTGAAGAAAACAGTTGGAAAGTACTCGATAAGAGACACTTTTTTGAATTCAAAATTGTTTGCTCTTGCACAAGGATGGGGTGGAAAGGAAGAGGGACTTGGACTAATTGCATCAGTTTTGCCTAATGGCTGTGACCCTATCGTACATGAAATGGGCTGTGCCCTTCATTTTGAGTTTTATTCAGTAAATGAGTCAGAAAGTGACATCAAAGGGGCTGAACCCCTGGTTGAAGGGTTGCAAATCATTCACTTAAGTGACGTCAACAAATGTGTGGAAACAGATCTTGGACTTTTGCACAAGTTGGTTACAGAATATAAAGTACCTTCCAGTTTAAGATTTTCTTTGCTTACAAGATTGCGGTTTGCTAGGGCTTTTGGTTCTTTGGGTTCTAGACAGCAATACACATGCATTCGCTTGTATGCTTTCATAATTCTGATTCAAGCCTGTGGTGACGCTGATGACCTGGCTTCGTTTTTCAATGCTGAGCCCGAATTTATCAATGAATTGGTTTCACTACTGAGCTATGAGGATGCAGTTTTGGAAAAAATTCGGGTTTTATGTTTACATTCATTAGCTGCTCTTTGCCACGATCGTTCCCGTCAACCTTCGGTATTGACTGCTGTTACATCTGGTGGGCATCGTGGCATTTTATCTAGCCTGATGCAAAAATCCATCGGCTCTGTTATTCATAATACATCAAATTGGTCAGTTCATTTTGCTGAAGCTCTTTTATCTCTTGTAACTGTGTTGGTTTCTTCATCGTCGGGATGTTCTGCCATGCGCGAAGCAGGATTCATTCCTACTCTTCTACCTCTACTGAAAGATACAAATCCACAACACTTGCTTCTGGTTGAAAAAGCTGTGCGCATTTTAGAAGCTTTTATGGATTACAGTAATCCAGCTGCTGCATTGTTCAGAGATTTGGGAGGTTTAGATGATACCATCTCACGCTTGAAGATTGAAGTATCCCATGTTGAAAATGGTGGAGAACAGCCAGATGAAAATTCCAAGTCTAGTAGAAGTGTGCATATGGTTGGAGATTCTTCAGTTTTGCTAAATGACATGCAGCCATTGTATTCTGAACCATTAATTTCTTATCACCGGAAATTGTTGATGAAAGCTCTATTGCGTGCTATATCCCTTGGAACCTATGCCCCTGGAAATACTGCCCGTATATATGAATCTGAAGATAATGTGTTGCCTCAGTGCTTATGTATAATTTTCAGACGAGCAAAATATTTTGGTGGTGGAGTTTTCTCGCTTGCGGCTACTGTCTTGAGTGATTTAATACAAAAAGATCCTACTTGTTTTCCGGTTTTAGATGCAGCTGGTCTTCCATCTGCCTTCTTGGATGCTATAATGGATGATGTACTATACTCTTCAGAAGCCATTACATGCATCCCCCAATGTTTGGATGCTTTATGCTTAAACAGTAATGGCCTTCAGGCTGTAAAAGATAGGAATTCTTTGAGGTGTTTTGTGAAGGTGTTTACTTCCAGAACATATTTGCGAGCTCTTACAGGGGACACACCTGCTTCTTTATCCAGTGGATTGGATGAATTAATGCGCCACGCTTCTTCGTTACGTGGGCCTGGAGTGGATATGTTGGTTGAGATTCTAGAAACTATCTCAAAAATTGGTTCTCCTGTGGATCCCTCATCTTTGTGTCCCGATCCTTGCTCTTCAAACTCTGTTCCTATGGAAATGGATGGTGGGGACAAGAATGTGATCTTGCCTGATAATAAGGAGTCATTGAAGGCAGATGACCCTGAGCTGATCAATGAGGAGTCTTATCTTCCAGATTGTGTGAACAATGTTGCTCGTCTGCTTGAGACAATTCTACAGAATGCTGACACATGTCGAATATTTGTTGAGAAAAAGGGGATTGAAGCTATTCTCCAGTTATTTACGCTGCCTTTAATGCCTCCTGTTTCTGTGGGGCAGAGCATCTCTGTTGCCTTCAAAAACTTTTCTCAACAACATTATGCTTCTCTTGCCCGAGCTTTATGCTCGTTTTTAAGGGAACATCTGAAATCTACCAATGAGCTTTTATATTCAGTTGGGGGGACTCAACTTGCTTTAGTTGAACCCACAAAGCAGACAAAGGTGTTGAAATGCATTTCTAGTCTTGAAGGTGTCTTGGCTCTCTCTGTATTTTTGTTGAAGGGAACAACTGCCGTGGCCTCTGAACTAAGCACTTCTGATGCTGATGTATTAAAAGATATTGGGAGAACTTACAGAGAAATAATTTGGCAAATATCTCTGTGTAATGACTCCAAGACAGGGGAAAAGAAGAATAATGATCAAGAACATGATGTTTCACAAGCACCTTCATCTACTGTTGTTGAAAGAGAGAGTGATGATGACACAAATATGCAGACCATTAGGTACACAAATCCAGTTTTTGGTAGGACAGGTTCACGTTCCCTGTGGAGTGGAGGGCGTGATTTTGTTTCTGTAGTTCGTTCTGAAGAAGGTTTGCACCGCCGTACTCGGCAAGGGATAGCCCGCATGCGAGGTGGGAGGACTGCTCGTCGGTTGGAAGCTTTAAACATTGACTTTGAATCATCTTCTAGTGCACTGGAGGCATCTTTGTCCCAAGATTTGAAAAAGAAAAGCCCCGACGTTCTTGCCTTAGAGATTCTTAACAAGCTGGCTTCAACAATGCGCTCTTTCTTCACTGCTCTCGTAAAGGGATTCACTACACCAAATCGTCGTCGAGCCGATTCAGGGTCACTTAGCTCAGCTTCAAAGTCCCTTGGAACTGTTTTAGCTACAAATTTTCTTGAGGCCCTTAGTTTTTCTGGACATTCTACTTATATTGGGCTTGAAACTTCACTTTCTGTAAAATGTAGATATCTTGGGAAGGTTGTGGATGATATGGCATCTCTCACATTTGACAGCAGGCGCAAAAGTTGTTATACTGCAATGGTTAATAACTTTTATGTACACGGAACGTTTAAGGAGTTATTGACAACATTTGAAGCTACTAGTCAGTTGCTATGGACTCTTCCGTGCTCTATCACATCATCAGAAATTGATCTTGGGAAGATAGGAGGAGCCAAGCTGTCCCATAACACATGGCTACTTGATACATTACAAAGCTACTGTCACTTGCTTGAGTACTTTGTAAACTCTTCTTTGCTGTTGTCCCCAACGTCGGCATCTCAGGCAGAGCTTCTTGTTCAGCCAGTTACTGTTGGCCTGTCAATTGGGCTCTTTCCAGTTCCAAGAGACCCAAAGGTTTTTGTGTGTACGCTGCAATCTCAGGTTCAGGATGTAATCCTACCAGTCTGGAATCATCCCATGTTTTGTAGTTGTAGTCCTGGTTTCATTGCATCAATTATTTCACTTGTTACACATGTATATTCTGGTGTTGGAGATGTGAAGCAAAATCGAAATAACATTATGGGAAGCACAAACCAACGTTTCATGCCCCCTCCACCTGATGAGGCAACCATTTCCACTATTGTTGAGATGGGTTTTTCAAGGGCAAGGGCAGAAGAAGCACTGAGAAGAGTTGAAACAAATAGTGTTGAAATGGCTATGGAGTGGCTGTTTAGTCATGCTGATGATCCTATCCAGGAGGATGACGAACTTGCACAGGCGCTTGCTTTATCCCTTGGAAGTAGTTCTGAAACTACTAAAGTTGATAGTGCCGAGAAGACTATTGACGTGCCAGTTGAAGAGGGACACATTAAGAAACCTTTAGTGGATGATATACTTGCTGCATCTGCGAAGTTGTTTCAGAGTAGTGATTTAGTGGCATTTAAATTGACAGATTTGCTCGTAACACTTTGCAACCAGAACAAAGGTGAAGTTCGTCCCAAAGTAATATCTTATCTTCTGCAGCAGCTAAAACTTTGTCCATTGGACTTTTCTGTGGATAATTGTGCATTAGGTGTGTTAGCACATATTATAGCATTACTTCTTTTTGAGGATGGAAGTGCAAGGGAAATTGCATCTCAGAACGGAATTATATCTATCACCATAGATATCTTGACAAACTTGAAAGACAGTCTCAAGTTGCGGAAAGAAATATCCGTCTCTAAATGCATTAGTGCTTTACTACTTATATTGGATCAAATGCTGCAGTCAAGGCCAAAGATTGAAAATGTGGAAAGAGGAACCCAAACTGGCTCCATGCCTGATTCATCTGGGGAGCATGGTTCCCTGCAATTTACAGATACAGTTGCGGAGGAAGAAAAGAAAATAGATGGGAGGGAAAAAGAACCTGGCATGGATTTTGAAAATGTATTGGGGAAACCTACTGGCTTTGCAACTATTGATGAAAGTCACAAGTTGTTGGATATTACATGTGATTTGATAAAACAACATGTCCCTGCTGTGGTCATGCAGGCTGTTCTACAATTATGTTCTCGGTTAACAAAAACTCATGCTTTGGCTATGAAGTTCCTTGAAAATGGAGGTCTGGCTGCTCTTTTTAGTCTTCCAAGGAATTGCTCTTTCCCTGGCTATGACACTGTTGTATCGACTATTGTTTGGCATCTTCTTGAAGATCCTCAAACACTACAAACAGCCATGGAGTTGGAGATACGACAAACTTTAAGTGGTAATCGTCATTCAGGGCGTGTTTCTCCCCGGTCATTTTTGACATCTTTGGCGCCAGTTATATCTAGAGATCCTACTGTTTTCATGAAAGCTGCCGCTGCAGTTTGTCAGTTAGAGACATCAGGGGGGAGGACAGTAGTTATGTTATCAAAGGAGAAAGAAAAGGAAAAATCTAAATCATCGAGTACTGAGGCTACAAATGAATGTCTCCGAATATCTGAAAGCAAGTCAAATGATGGATCTGGAAAATGTCTGAAAAGCCACAAAAAGGTTCCAGTAAATCTCACTCTAGTAGTTGATCAACTTCTTGAGATTGTGCTGAAGTACCCACCAATGGAAGGCCGGGAAGATTTTGAGTGTGACTCTACGTTAATGGATATAGATGAACCTACTATGATGATCAAAGGAAAATCAAAGGTTGACGAGACAGTGATATTAAAGCCCGAGTCTGAAAGGTCTGCAGAATTGGTGAAGGTGACTTTTGTCCTTAAGTTATTGAGTGACGTTCTTCTAATGTATGGACATACAGTTGGTGTCATACTCAGACGCGACTCTGAAATGTGTCAATTTCGTGGATCTAATCAACCATCTGGACATAATGGCATTATCCATCATGTAATACATCGGTTGCTACCACTTTCTGTTGACAAATCTGTAGGACCTGATGATCAGAGAGGTAAGTTGTCTGAGAAAGCTTCATGGTTCCTGGTAGTTTTGTGTGGTCGATCTGGTGAAGGTCGTAAGCGAGTGACTAATGAACTTATTAAAGAAATGATGTCCTTTTCAAATTTCGAGAGCAATTCTTTGAAAAGCAGCTTATCCCCAGATAAAAGGCTTTTTACTTTTGTTGATCTTGTATATTCTATATTGTCGAAAAACTCGTCATCTGGTAGCCTTCCTGGTTCTGGATATTCACCTGATATTGCAAAAAGCTTGATCGATGGTGGAATGATCAAATGTTTAACTAGCATCCTGCAGGTGGTTGATTTGGATCATCCTGATGCACCCAAATTTGTGACTCTTGTACTCAAAGGTTTAGAATGTCTTACCAGAGCTGCTAATGCTAGTGAGCAGATTTTTAAATCTGATGGGATTGAAAAGAGAAGATCTGATGATCAAATAGCAGCTCCTTCTGCAGTTGAAACCGTGGCACATGATCAGAATGCAAGCAGTCAAGAAGCACTCAGAGAAATGATGGTTAATGCACATAATCAAAGAACTTCTCAAGGTGATCATCATGCTGATAACTCAAATCAGTCAGTTGAACGAGATATGAGTGTAGAAGAACAGGAGACAATAGCCCAAAATACACTAGTGGAACTAAGAATGGACTTGATGCGTGAGGAGATTGGAGAGGGAAGTGTCTTGCAGAACCCAGAGCAAATTGAAATGACTTTTAGTGTTGAGAATAGGGCCGATGATAACATGGGTGATGAAGATGATGAAATGGGTGATGATGAAGATGATGATGGAGAGGATGAAGATGAGGATATAGCAGAAGATGGTGGGGGCATGATGTCTTTGGCCGATACTGATGTTGAGGATCATGATGATGCCGGCTTGGGGAATGAATACATTGATGAAATGATTGATGAAGACGACGATGATTTTCATGAGAATCGCATCATAGAGGTGAGATGGAGGGAAGCTCTTGATGGATTGGATCACTTCCAGATTCTTGGGCAACCTGGAACTGGTGGTGGCCTTATGGATGTGGTTGCCGAACCTTTTGAACGGGTTACTGTTGATGACTTTTTTCGTCTTCAAAGTTTTGAACGTCGCCGCCAGACAGGTAGATCTTCCTTCGAGAGATCTGTTTCTGAAATAAATGCTTTTCAACATCCTCTTCTTGTAAGGCCACCGCAATCTGGCGATTCTGTCTCTATGTGGTCATCAGGTGGTATTTCTGCATCCCGGGATTCGGAAACCCAGTCATCTGGGAATCATGATATGACCCATTTCGACATGTTCGATGCACCTATTTTTCCATATGATCACATGCCAAGTAGTCTGTTTGGAGACCGGTTGGGTGGTGTAGCACCACCACCTCTAGCAGATTATTCTGTGGGTATGGGTTCATTACATCTACCTGGAAGAAGAGTGTTAGGTAATGGTAGGTGGGCCGATGATGGTCAACCACAAGGAGGCACTCAAGCGGCAGCCATTGCAATAGCAGTGGAGGAACAATTTTTAGCTCAGATGGGTTCCATAGCTCCTGCAAGCAGTCCTACTGAACAGCAAGCACATAATTCTGAAGAACAAGAGAAGCAATCTGATGCTATTCCATCACGTGATGCTCCAGTGTTGACTGTTGGGACCGACTCTACTTGTCAGCAGTTTGCAGGCCAGGATCAGGAAAATGGTATTGAAACCATACCTCAACAAATAAACCTTTCAGTTGATGGTGCTTCTTGCGAGGAGGAGATAAATGTAGACTCCAGTGTTCAGGATCCCCTGCAAACTAACGAGCCTGTGTCAGTTCAACCTCTTTCGCTGAACCTCATGACAAATAATCTTGATTGCCCTGAAAATGAAATAAACGCCGCTCCCAGTGAGAATGTAGAAATACCCCAGGAATTTATGAACTCGTCTATTGAGTCTTGTACTGATGTACGATGCGGACAGGATCCTGATGTACCTACTAACAACCACAATGTGCCAGTTGTACCAATGGGCTGCAATGGGACATCCAATGTTGATGGGCAGCCTACTAATCTTGAGTTACCAGATTCTGGTTTAGAGACTACTAATCCAAGTGATTGCCGTGCATCGTCAATTTATGCCAGTGTTGATGTTGATATGGGTGGTGTTGATGCTGAAGGAAACCAATCAGGGCAACCAAATGTTTCTGAAGACATAAGGGATGAGCTCTTATCAACTCAGAACACAGTGGTTGCTCTGGATGATACTCAGGCTGATCAAACTAGTGCAAATAATTCTGGTGCAAATACGATTGACCCTACATTTTTGGAAGCTCTTCCTGAAGATCTACGAGCAGAAGTTTTGGCATCCCAGCAAGCTCAATCTGTTCAACCTCCAGTTTATGCACCACCTTCTGCAGATGATATTGATCCCGAGTTTTTAGCTGCTCTTCCTCCAGATATTCAAGCAGAGGTTTTGGCCCAACAAAGAGCTCAAAGGATTGTCCAACAGGCTGAAGGACAGCCAGTTGACATGGATAATGCTTCTATAATTGCAACTTTTCCAACTGATTTGCGTGAAGAGGTGCTATTGACTTCTTCTGAAGCAGTTCTGTCAGCACTGCCGTCTTCATTGCTTGCTGAAGCTCAAATATTGAGGGACCGAGCAATGAGTCATTATCAAGCTCACAGCCTTTTTGGGAACAGTCACAGGCTTAACAATCGAAGAAACGGCTTGGGATTTGTTCGGCGGCCTGTGATGGATCGGGGTGTCGGAGTTGCAATAGACAGGAGTTCTGCTCTTACGGATACTTTGAAGGTGAAGGAGATTGAAGGCGAGACAGTAGTTGATGCAAATGCATTAAAAGCTTTGATCCGACTTCTACGATTGGCACAACCCCTTGGAAAAGGCCTCCTGCAGAGACTCTTGTTAAACTTATGTGCACATAGTGTAACAAGGGCCACTCTTATTTATCTTTTGCTTGATATGATTAAGCCGGAAGCTGAAGGTTCTGCAAGCAGGCCAGCGACATTAAATGACCAGAGGCTTTATGGTTGTCACTCAAATACAATATATGGCCGATCTCAGATGTTGGATGGTCTCCCTCCCCTAGTGTTCCGCCGTATTCTTGAGATTCTGACTTACTTGGCCACAAATCATTCTGCTGTTGCAAAAATGTTGTTTCACTTTGATCAATCAATTACAGATTTTTCAAATTCATCCACGACACCTTTGAATGGGAAAGGAAAGGAAAAGGTTAACGAAGGGGGATCTTCACCAAAACCCTTTGGAGCTCATGCAGGGGTCGTTCCCCTTGTTCTCTTTTTGAAGCTCTTGAACCGACCATTATTTTTACGCAGTACTGCTCATCTTGAGCAGGTCATGGGTCTGATTCAAGTTGTAGTTGATACTGCTGCATCCAAATTAGAAAGTCAATCTCAATCTGAAAAAGCGATAGCAGATACCCAAAATCTGTCTGTTAATGAAGCTGAGAACGATCCTCCTTTAGTGGAGATGGACTCTAATCGACAAGATAACCATGCTGATCCGAAAACGTGTTCTTCCAACGGAAAGAAGAATGTTGATATGTACAATACCTTCTTGCAGTTACCCCAATCTGATTTGCGGAATGTGTGCAGTCTTCTTGGTCATGAAGGGCTTTCGGATAAAATGTATACGCTTGTTGGTGAGGTGCTGAAGAAGTTGGCTTTCATTGTTCCCGCTCATAGAAAGTTCTTTATTTTAGAGCTTTCAGAATCATCTCATGCATTGACTGGTTCAGCTGTCAGTGATCTTGTTACCCTGCAGCAAACAAATATGCTTGGCTTGAGTGCTGGTTCTATGGCTGGTGCATCCATTCTACGTGTGCTGCAAGCTCTAAGCTCCCTCATTTCATTTAATACTTCAGGTGATAAGGATATGGAAAGTGATGTAGATCAGCATGAGGACGAAGCAATTATTTGGAATTTGAATACTGCACTCGAGCCACTGTGGCAAGAACTCAGTAATTGTATAAGTGCAGCTGAGATGCAACTTGGCCAGAGTTCTTTTTGTCCGAACATGTCAAATATAAATGTTGCCGAAAATTTGCACGGTTCCTCTACTTCACCACCACTTCCTCCTGGAACACAAAGACTTTTGCCTTTCATTGAGGCTTTCTTTGTTTTGTCTGAGAAGCTACAAGCAAACGAATCTATCATGCAGCAAGACCATGACAATGCAACTGCTAGAGAAGTCAAGGAGTGTGCTGGTGGTTCAGCTTCGGTGAGTGGAAAATTTTGTGGAGATTCGCAGCGAAAGCTGGATGGTGCTGTTACATTTACAAGGTTTGCGGAGAAGCATCGCCGACTTGCAAATGCTTTCATTAGGCAGAATCCGGGTTTATTGGAGAAATCTCTTTCCATGATGCTGAAGGCACCAAGACTTATTGACTTTGATAACAAGAGAGCCTATTTTCGCTCAAGAATCAGGCAACAACATGAACACCAATTGTCCGGGCCGCTGCGTATAAGTGTAAGGCGGGCTTATATTTTGGAGGACTCATATAATCAATTAAGGATGCGTCCTACTCAGGACCTCAAGGGCCGATTGAATGTGCAATTTCAAGGTGAAGAGGGTATTGATGCTGGTGGTCTGACCAGAGAATGGTATCAGCTACTATCAAGGGTCATTTTTGACAAGGGTGCTTTACTTTTCACAACAGTGGGGAACAATGCAACTTTCCAACCAAACCCTAACTCTGTTTACCAGACTGAACACCTTTCATACTTCAAGTTTGTGGGCCGAGTGGTGGGGAAGGCGTTGTTTGATGGACAGCTATTGGATGTTTACTTTACCCGATCTTTCTATAAACATATACTCGGTGTTAAGGTTACATACCATGACATTGAAGCGGTTGATCCTGATTACTATAAGAATTTGAAATGGATGTTGGAGAATGACGTGAGTGATATTCCAGACCTGACATTTAGCATGGATGCTGATGAAGAAAAACTCATACTTTATGAGAAGAATGAGGTCACTGATTATGAGCTTAAACCTGGGGGAAGGAACATAAGGGTTACTGAAGAAACAAAGCATGAGTACGTTGACCTTGTTGCTGAACATCTCCTGACTAATGCCATCCGTCCTCAAATCAACTCCTTTCTAGAAGGTTTTAGTGAAATGGTACCACGGGAACTTATATCAATCTTCAATGATAAAGAGCTTGAGCTACTCATAAGTGGTCTTCCAGAAATCGATTTGGATGATTTGAAGGCAAACACCGAGTATACAGGCTATACTGTTGCATCAAATGTTGTTCAATGGTTTTGGGAGGTAGTCAAGTCTTTCAATAAGGAAGACATGGCCAGATTACTGCAGTTTGTGACAGGAACATCAAAGGTTCCTTTGGAGGGTTTTAAAGCCTTGCAAGGCATCTCTGGTCCCCAAAGGTTTCAGATTCACAAGGCATATGGAGCTCCTGATCGACTTCCATCAGCTCATACTTGCTTCAATCAACTAGATCTTCCTGAGTATACCTCTAAGGAACAGCTTCAAGACCGTTTGTTACTTGCCATCCATGAGGCTAGTGAAGGGTTTGGTTTTGGTTGA

Protein sequence

>Msa0698960

MRLKRKRALEVPPKIRCFINCVTAVPLENIQEPLNNFVWEFDKGDFHHWADLFNHFDSFFEKYVKPRKDLQVDDGFLDSDPPFPKEAVLQILRVIRIILDNCPNKHFYSSYEQHLSLLLASTDPDVVEATLDTFATFLKKTVGKYSIRDTFLNSKLFALAQGWGGKEEGLGLIASVLPNGCDPIVHEMGCALHFEFYSVNESESDIKGAEPLVEGLQIIHLSDVNKCVETDLGLLHKLVTEYKVPSSLRFSLLTRLRFARAFGSLGSRQQYTCIRLYAFIILIQACGDADDLASFFNAEPEFINELVSLLSYEDAVLEKIRVLCLHSLAALCHDRSRQPSVLTAVTSGGHRGILSSLMQKSIGSVIHNTSNWSVHFAEALLSLVTVLVSSSSGCSAMREAGFIPTLLPLLKDTNPQHLLLVEKAVRILEAFMDYSNPAAALFRDLGGLDDTISRLKIEVSHVENGGEQPDENSKSSRSVHMVGDSSVLLNDMQPLYSEPLISYHRKLLMKALLRAISLGTYAPGNTARIYESEDNVLPQCLCIIFRRAKYFGGGVFSLAATVLSDLIQKDPTCFPVLDAAGLPSAFLDAIMDDVLYSSEAITCIPQCLDALCLNSNGLQAVKDRNSLRCFVKVFTSRTYLRALTGDTPASLSSGLDELMRHASSLRGPGVDMLVEILETISKIGSPVDPSSLCPDPCSSNSVPMEMDGGDKNVILPDNKESLKADDPELINEESYLPDCVNNVARLLETILQNADTCRIFVEKKGIEAILQLFTLPLMPPVSVGQSISVAFKNFSQQHYASLARALCSFLREHLKSTNELLYSVGGTQLALVEPTKQTKVLKCISSLEGVLALSVFLLKGTTAVASELSTSDADVLKDIGRTYREIIWQISLCNDSKTGEKKNNDQEHDVSQAPSSTVVERESDDDTNMQTIRYTNPVFGRTGSRSLWSGGRDFVSVVRSEEGLHRRTRQGIARMRGGRTARRLEALNIDFESSSSALEASLSQDLKKKSPDVLALEILNKLASTMRSFFTALVKGFTTPNRRRADSGSLSSASKSLGTVLATNFLEALSFSGHSTYIGLETSLSVKCRYLGKVVDDMASLTFDSRRKSCYTAMVNNFYVHGTFKELLTTFEATSQLLWTLPCSITSSEIDLGKIGGAKLSHNTWLLDTLQSYCHLLEYFVNSSLLLSPTSASQAELLVQPVTVGLSIGLFPVPRDPKVFVCTLQSQVQDVILPVWNHPMFCSCSPGFIASIISLVTHVYSGVGDVKQNRNNIMGSTNQRFMPPPPDEATISTIVEMGFSRARAEEALRRVETNSVEMAMEWLFSHADDPIQEDDELAQALALSLGSSSETTKVDSAEKTIDVPVEEGHIKKPLVDDILAASAKLFQSSDLVAFKLTDLLVTLCNQNKGEVRPKVISYLLQQLKLCPLDFSVDNCALGVLAHIIALLLFEDGSAREIASQNGIISITIDILTNLKDSLKLRKEISVSKCISALLLILDQMLQSRPKIENVERGTQTGSMPDSSGEHGSLQFTDTVAEEEKKIDGREKEPGMDFENVLGKPTGFATIDESHKLLDITCDLIKQHVPAVVMQAVLQLCSRLTKTHALAMKFLENGGLAALFSLPRNCSFPGYDTVVSTIVWHLLEDPQTLQTAMELEIRQTLSGNRHSGRVSPRSFLTSLAPVISRDPTVFMKAAAAVCQLETSGGRTVVMLSKEKEKEKSKSSSTEATNECLRISESKSNDGSGKCLKSHKKVPVNLTLVVDQLLEIVLKYPPMEGREDFECDSTLMDIDEPTMMIKGKSKVDETVILKPESERSAELVKVTFVLKLLSDVLLMYGHTVGVILRRDSEMCQFRGSNQPSGHNGIIHHVIHRLLPLSVDKSVGPDDQRGKLSEKASWFLVVLCGRSGEGRKRVTNELIKEMMSFSNFESNSLKSSLSPDKRLFTFVDLVYSILSKNSSSGSLPGSGYSPDIAKSLIDGGMIKCLTSILQVVDLDHPDAPKFVTLVLKGLECLTRAANASEQIFKSDGIEKRRSDDQIAAPSAVETVAHDQNASSQEALREMMVNAHNQRTSQGDHHADNSNQSVERDMSVEEQETIAQNTLVELRMDLMREEIGEGSVLQNPEQIEMTFSVENRADDNMGDEDDEMGDDEDDDGEDEDEDIAEDGGGMMSLADTDVEDHDDAGLGNEYIDEMIDEDDDDFHENRIIEVRWREALDGLDHFQILGQPGTGGGLMDVVAEPFERVTVDDFFRLQSFERRRQTGRSSFERSVSEINAFQHPLLVRPPQSGDSVSMWSSGGISASRDSETQSSGNHDMTHFDMFDAPIFPYDHMPSSLFGDRLGGVAPPPLADYSVGMGSLHLPGRRVLGNGRWADDGQPQGGTQAAAIAIAVEEQFLAQMGSIAPASSPTEQQAHNSEEQEKQSDAIPSRDAPVLTVGTDSTCQQFAGQDQENGIETIPQQINLSVDGASCEEEINVDSSVQDPLQTNEPVSVQPLSLNLMTNNLDCPENEINAAPSENVEIPQEFMNSSIESCTDVRCGQDPDVPTNNHNVPVVPMGCNGTSNVDGQPTNLELPDSGLETTNPSDCRASSIYASVDVDMGGVDAEGNQSGQPNVSEDIRDELLSTQNTVVALDDTQADQTSANNSGANTIDPTFLEALPEDLRAEVLASQQAQSVQPPVYAPPSADDIDPEFLAALPPDIQAEVLAQQRAQRIVQQAEGQPVDMDNASIIATFPTDLREEVLLTSSEAVLSALPSSLLAEAQILRDRAMSHYQAHSLFGNSHRLNNRRNGLGFVRRPVMDRGVGVAIDRSSALTDTLKVKEIEGETVVDANALKALIRLLRLAQPLGKGLLQRLLLNLCAHSVTRATLIYLLLDMIKPEAEGSASRPATLNDQRLYGCHSNTIYGRSQMLDGLPPLVFRRILEILTYLATNHSAVAKMLFHFDQSITDFSNSSTTPLNGKGKEKVNEGGSSPKPFGAHAGVVPLVLFLKLLNRPLFLRSTAHLEQVMGLIQVVVDTAASKLESQSQSEKAIADTQNLSVNEAENDPPLVEMDSNRQDNHADPKTCSSNGKKNVDMYNTFLQLPQSDLRNVCSLLGHEGLSDKMYTLVGEVLKKLAFIVPAHRKFFILELSESSHALTGSAVSDLVTLQQTNMLGLSAGSMAGASILRVLQALSSLISFNTSGDKDMESDVDQHEDEAIIWNLNTALEPLWQELSNCISAAEMQLGQSSFCPNMSNINVAENLHGSSTSPPLPPGTQRLLPFIEAFFVLSEKLQANESIMQQDHDNATAREVKECAGGSASVSGKFCGDSQRKLDGAVTFTRFAEKHRRLANAFIRQNPGLLEKSLSMMLKAPRLIDFDNKRAYFRSRIRQQHEHQLSGPLRISVRRAYILEDSYNQLRMRPTQDLKGRLNVQFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNNATFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDADEEKLILYEKNEVTDYELKPGGRNIRVTEETKHEYVDLVAEHLLTNAIRPQINSFLEGFSEMVPRELISIFNDKELELLISGLPEIDLDDLKANTEYTGYTVASNVVQWFWEVVKSFNKEDMARLLQFVTGTSKVPLEGFKALQGISGPQRFQIHKAYGAPDRLPSAHTCFNQLDLPEYTSKEQLQDRLLLAIHEASEGFGFG*