AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0026240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0026240 MtrunA17_Chr1g0181721 97.936 1502 29 2 1 1502 1 1500 0.0 3028
Msa0026240 MtrunA17_Chr4g0037101 48.696 690 301 9 912 1551 1195 1881 0.0 609
Msa0026240 MtrunA17_Chr4g0037101 37.004 781 420 8 97 810 175 950 1.90e-128 442
Msa0026240 MtrunA17_Chr7g0263641 50.000 452 145 7 919 1366 147 521 1.59e-126 405
Msa0026240 MtrunA17_Chr7g0263641 48.276 116 58 1 713 826 23 138 1.48e-26 116
Msa0026240 MtrunA17_Chr7g0263651 67.568 185 50 1 1377 1551 1 185 1.00e-80 263
Msa0026240 MtrunA17_Chr7g0263611 49.434 265 105 8 92 337 21 275 7.38e-63 216
Msa0026240 MtrunA17_Chr7g0263621 63.504 137 49 1 393 528 16 152 7.10e-46 162
Msa0026240 MtrunA17_Chr2g0293841 28.571 462 259 15 1102 1551 622 1024 3.60e-35 146
Msa0026240 MtrunA17_Chr3g0132611 28.750 400 238 10 1155 1548 3300 3658 9.67e-35 146
Msa0026240 MtrunA17_Chr5g0427791 28.607 402 236 11 1155 1548 3294 3652 1.52e-32 139
Msa0026240 MtrunA17_Chr4g0052561 28.678 401 231 12 1158 1548 3400 3755 4.57e-32 137
Msa0026240 MtrunA17_Chr4g0052551 28.250 400 234 12 1158 1548 3379 3734 8.14e-31 133
Msa0026240 MtrunA17_Chr7g0265431 26.596 470 263 13 1105 1551 738 1148 7.69e-27 119
Msa0026240 MtrunA17_Chr4g0075761 25.132 378 223 8 1181 1547 548 876 3.81e-19 94.4
Msa0026240 MtrunA17_Chr2g0289901 25.079 315 170 12 1264 1537 29 318 2.54e-17 85.1
Msa0026240 MtrunA17_Chr7g0263631 33.858 127 78 3 590 711 1 126 2.27e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0026240 AT5G02880.1 54.528 1568 630 19 1 1551 1 1502 0.0 1556
Msa0026240 AT5G02880.2 53.975 1547 629 19 1 1530 1 1481 0.0 1516
Msa0026240 AT4G38600.3 48.547 688 293 9 918 1551 1208 1888 0.0 605
Msa0026240 AT4G38600.3 36.829 782 414 11 100 810 192 964 4.15e-133 456
Msa0026240 AT4G38600.1 48.547 688 293 9 918 1551 1208 1888 0.0 605
Msa0026240 AT4G38600.1 36.829 782 414 11 100 810 192 964 4.15e-133 456
Msa0026240 AT4G38600.2 48.110 688 293 10 918 1551 1117 1794 0.0 594
Msa0026240 AT4G38600.2 36.829 782 414 11 100 810 119 891 3.37e-133 455
Msa0026240 AT3G17205.1 28.139 462 261 13 1102 1551 627 1029 5.46e-36 149
Msa0026240 AT3G17205.3 28.139 462 261 13 1102 1551 627 1029 5.46e-36 149
Msa0026240 AT3G17205.2 28.139 462 261 13 1102 1551 613 1015 5.99e-36 149
Msa0026240 AT1G55860.1 27.545 501 286 17 1058 1548 3245 3678 9.83e-33 140
Msa0026240 AT1G70320.1 28.211 436 248 13 1130 1548 3268 3655 1.82e-32 139
Msa0026240 AT3G53090.1 30.864 324 178 7 1241 1551 852 1142 1.49e-29 129
Msa0026240 AT3G53090.2 30.864 324 178 7 1241 1551 852 1142 1.49e-29 129
Msa0026240 AT4G12570.1 24.185 368 219 12 1181 1537 540 858 2.74e-13 75.5

Find 361 sgRNAs with CRISPR-Local

Find 709 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTACATTATAAATTAAT+TGG 0.108360 1_1:+50003377 None:intergenic
AGCCTGCAAGTTTGTCTTTA+TGG 0.127172 1_1:+49999394 None:intergenic
GCGTTGGCAGTATGCCTTTC+TGG 0.146304 1_1:-49999781 Msa0026240:CDS
GGCAGTTCATCTACCATTTC+TGG 0.157663 1_1:+50004687 None:intergenic
ACAGGAATCCATTCTCTTTA+TGG 0.164689 1_1:-49999365 Msa0026240:CDS
CTTGACTGGATCAGCTTATT+TGG 0.173323 1_1:-49996017 Msa0026240:three_prime_UTR
TTTATCACTTGGCCAATATA+TGG 0.187779 1_1:-50001312 Msa0026240:CDS
GCCTTCTATAAACTTATTCT+TGG 0.198719 1_1:-49999197 Msa0026240:CDS
CCTGATACTGTTCTTGCTTC+AGG 0.204370 1_1:-49998872 Msa0026240:CDS
CAAATTATGGACAAGCTTAT+TGG 0.211903 1_1:-50001398 Msa0026240:CDS
TAGAAGAAGATTGCATAATA+TGG 0.213469 1_1:+50003659 None:intergenic
GTCACAGCAAGTTGCTTTCT+TGG 0.217991 1_1:-49995919 Msa0026240:three_prime_UTR
CTTACAGGCAGGGGCAATTA+TGG 0.231409 1_1:-50003945 Msa0026240:CDS
TTTCTGGTGTAATCAGTTAT+TGG 0.236134 1_1:-49999765 Msa0026240:CDS
ATCATCTTCTTCAGGAATTC+AGG 0.237048 1_1:-50000530 Msa0026240:intron
ATTGAGTGCAAAGAAGAAAA+AGG 0.254801 1_1:+50000963 None:intergenic
TTTGTTTGTTTGACCAAATC+TGG 0.262499 1_1:-50002043 Msa0026240:CDS
TTTGCACAGGTGTTTAATTC+TGG 0.267152 1_1:-50002112 Msa0026240:intron
ACAACCACTTGCTTGCTTAC+AGG 0.269423 1_1:-50003960 Msa0026240:CDS
TGTACGTTGCTCAGAATAAT+AGG 0.270713 1_1:+50001119 None:intergenic
AATTGAAGCGGTGGACTTTC+AGG 0.276996 1_1:+50000861 None:intergenic
CCCGTTTCACCTTGAAATAT+TGG 0.277617 1_1:+50001994 None:intergenic
TAGCAACAACTTGACCTAAA+AGG 0.279896 1_1:+49999264 None:intergenic
TCCAATGCTAGTTGATTATT+CGG 0.280130 1_1:+50002280 None:intergenic
TTTCTTGAAGTTATTTATAA+AGG 0.284298 1_1:-50001804 Msa0026240:CDS
AGATAATGTTGTTATCTATA+AGG 0.287139 1_1:-50004230 Msa0026240:CDS
TCACAGCAAGTTGCTTTCTT+GGG 0.290016 1_1:-49995918 Msa0026240:three_prime_UTR
ACACATCTCTTAAGTGTAAA+TGG 0.294828 1_1:-50003415 Msa0026240:CDS
TTTGTACAGTATTTAGTATT+GGG 0.305006 1_1:-49995761 Msa0026240:three_prime_UTR
TAGTGAACTTGTTTCTGATT+TGG 0.305509 1_1:-50000035 Msa0026240:CDS
CGCAGGGTTCGGTTTCCAAT+TGG 0.312562 1_1:-50004750 Msa0026240:intron
ACTCTATATCAGGCAATTCT+TGG 0.313246 1_1:-50000250 Msa0026240:CDS
ACCAGAAAGATCATCAAAAT+TGG 0.318013 1_1:-50001747 Msa0026240:CDS
CTTCACTGACTACAATTGTT+GGG 0.318568 1_1:-49995880 Msa0026240:three_prime_UTR
GCCTGATATAGAGTCAATTT+AGG 0.318810 1_1:+50000259 None:intergenic
TAGGGTACTGGATCAAATTA+TGG 0.322008 1_1:-50001411 Msa0026240:CDS
TCCAAGAATAAGTTTATAGA+AGG 0.323416 1_1:+49999196 None:intergenic
TGGGGAGTAGAAGCAATTAA+TGG 0.327149 1_1:-50004730 Msa0026240:exon
CCTTAACAAAACGTACTTTC+AGG 0.327563 1_1:+50001039 None:intergenic
AGTTTCAAGCACTAGTTAAC+AGG 0.335099 1_1:-49999006 Msa0026240:CDS
CTGATACTGTTCTTGCTTCA+GGG 0.335158 1_1:-49998871 Msa0026240:CDS
GCAGGGTTCGGTTTCCAATT+GGG 0.341089 1_1:-50004749 Msa0026240:intron
TCGTTTGCTACCGTTCCTAA+TGG 0.341445 1_1:-50001083 Msa0026240:CDS
CTCCACAAGCATGCCAGATT+TGG 0.343831 1_1:+50002030 None:intergenic
TTTGCTTGACAGGGTTTGAT+AGG 0.343922 1_1:-50003241 Msa0026240:intron
GAACAACGCTAGCAGGTAAA+TGG 0.344358 1_1:+49995721 None:intergenic
TGCTCACGAACTCATTTAGT+TGG 0.352397 1_1:+49999855 None:intergenic
TCCTAAATTGACTCTATATC+AGG 0.352943 1_1:-50000260 Msa0026240:CDS
CACTGGTCTTGGACCAACTT+TGG 0.353799 1_1:-49999492 Msa0026240:CDS
AGGTTTCACAGCTGCTCTAT+AGG 0.360588 1_1:+50000162 None:intergenic
CGGGATCAGTCGTAGCCTTC+AGG 0.360602 1_1:-50003198 Msa0026240:CDS
CCAAGCTTCTGCAGGAGATC+TGG 0.360951 1_1:+50002232 None:intergenic
TTCTCAGAATCATATAATTC+CGG 0.363354 1_1:+50001536 None:intergenic
AGAAAGCCCCACACCTTTCA+TGG 0.366588 1_1:-50003691 Msa0026240:CDS
CACCCCTTTCTATATTAATC+AGG 0.366699 1_1:-50001178 Msa0026240:CDS
GGTGTAATTATTAGGGTGAT+TGG 0.372397 1_1:-49995986 Msa0026240:three_prime_UTR
TAAATGGCTATTAATCATTA+AGG 0.375221 1_1:+49995737 None:intergenic
ATAGATAACAACATTATCTC+TGG 0.375506 1_1:+50004234 None:intergenic
AGTTTACCGCGACCGGATCT+TGG 0.377364 1_1:-49999591 Msa0026240:CDS
GCTGGGGAATCATCTTCTTC+AGG 0.379627 1_1:-50000538 Msa0026240:CDS
TACTTCAAACTGGCAGCATT+TGG 0.381453 1_1:-49999701 Msa0026240:CDS
TTAAGAACGCCAATATTTCA+AGG 0.382881 1_1:-50002003 Msa0026240:intron
TTATCACTTGGCCAATATAT+GGG 0.385628 1_1:-50001311 Msa0026240:CDS
TCTCTGGCTCTTCCTCTGAA+TGG 0.387400 1_1:+50004529 None:intergenic
TACCATAAAGACAAACTTGC+AGG 0.388688 1_1:-49999396 Msa0026240:CDS
GATAATGTTGTTATCTATAA+GGG 0.388751 1_1:-50004229 Msa0026240:CDS
CCTGCTAGCGTTGTTCCCTT+TGG 0.390407 1_1:-49995714 Msa0026240:three_prime_UTR
TATAGAAGGCTTTAGAAAAG+TGG 0.391315 1_1:+49999210 None:intergenic
GAAGAAGTGGGCACTGGTCT+TGG 0.391848 1_1:-49999503 Msa0026240:CDS
ACACAGGACCTTGTATTTGA+TGG 0.392532 1_1:+50000837 None:intergenic
TCTTCAATCATCCTCTTCTC+TGG 0.393389 1_1:-50005811 Msa0026240:intron
CCTGAAGCAAGAACAGTATC+AGG 0.394520 1_1:+49998872 None:intergenic
GCTTACATTATAAATTAATT+GGG 0.396042 1_1:+50003378 None:intergenic
CTGGTTAAAGCCGGATTTGA+AGG 0.396606 1_1:+49998659 None:intergenic
ATGCAATCTTCTTCTATATG+AGG 0.398799 1_1:-50003652 Msa0026240:CDS
AATTGCTTCTACTCCCCAAT+TGG 0.398914 1_1:+50004735 None:intergenic
GCAACAGATGAGGGACTCTA+TGG 0.399457 1_1:-49999810 Msa0026240:CDS
TTGTTGGTGGACACTGTAAT+CGG 0.400693 1_1:-50003090 Msa0026240:CDS
AGGAAATTCTGAGTTGGAAC+AGG 0.403866 1_1:-49998957 Msa0026240:CDS
GGTCTAGGATGTGATGTCTT+TGG 0.403891 1_1:+50000583 None:intergenic
AAGACAAAGATCCTCAATTC+TGG 0.405489 1_1:+49998916 None:intergenic
TCTGTTTCTTCTTAAAAGCT+TGG 0.412107 1_1:-49999987 Msa0026240:CDS
ATTGGTAGCAATGTAGATAA+AGG 0.414810 1_1:-49995968 Msa0026240:three_prime_UTR
CCATCAGCTGAATCCTTCTC+TGG 0.415608 1_1:+50004513 None:intergenic
CAGATCTCCTGCAGAAGCTT+GGG 0.415893 1_1:-50002231 Msa0026240:CDS
ACTCAATTGAAAGATATCTA+TGG 0.416876 1_1:-50000947 Msa0026240:CDS
TTTGCGGAGAGAACGATTCT+TGG 0.417616 1_1:-49996805 Msa0026240:CDS
TTACCTTGAAGGACAACCTC+TGG 0.418065 1_1:-50000284 Msa0026240:CDS
TCTTCACTGACTACAATTGT+TGG 0.418381 1_1:-49995881 Msa0026240:three_prime_UTR
CCTGCACGTTCTGAGATTGC+TGG 0.419146 1_1:+50000804 None:intergenic
GCTGAGCGCACTGACTTCAT+TGG 0.424825 1_1:-50001150 Msa0026240:CDS
TGAAGGTAAAGTTGATAATC+TGG 0.429075 1_1:-49999906 Msa0026240:CDS
CATGACTTCATTCTCTTGAC+TGG 0.430780 1_1:-49996031 Msa0026240:exon
GAATTATATGATTCTGAGAA+AGG 0.434177 1_1:-50001533 Msa0026240:CDS
AGATCCTTGACCCTCTGTTA+TGG 0.436200 1_1:+49996064 None:intergenic
CTTCTTAATTATTTATCACT+TGG 0.436600 1_1:-50001323 Msa0026240:CDS
TAACTAGTTGCTAGCAGTGC+TGG 0.437225 1_1:-49995941 Msa0026240:three_prime_UTR
ACGAATACGGAGGTAGCTTA+AGG 0.440357 1_1:+49996222 None:intergenic
ATCATGTGATTCAGATGAAA+TGG 0.441384 1_1:-50004490 Msa0026240:CDS
AAGGTATAAAATTCCAAAGT+TGG 0.442534 1_1:+49999479 None:intergenic
CTTTAGAGATTCCAGAATTG+AGG 0.442539 1_1:-49998927 Msa0026240:CDS
TTCACATTGACTGCTTGATC+GGG 0.443383 1_1:+50000562 None:intergenic
GAGGTGTGCCGGTCACGAAC+TGG 0.444457 1_1:+49996457 None:intergenic
CTGTTTCTGCTTTATGTCAA+AGG 0.448199 1_1:-50004146 Msa0026240:CDS
ATGGACTCTTTCCTCGTCCA+TGG 0.448715 1_1:-49999346 Msa0026240:CDS
AACTTGCAGGCTGAGGAAAC+AGG 0.448741 1_1:-49999383 Msa0026240:CDS
AGGTCAAAAGCGTCCAGAAA+TGG 0.454675 1_1:-50004700 Msa0026240:CDS
GAGTTACAGAAGTCTGGTTC+GGG 0.454806 1_1:-49999446 Msa0026240:CDS
CCAGATCTCCTGCAGAAGCT+TGG 0.455365 1_1:-50002232 Msa0026240:CDS
AACAGTAAGTGACAGGCGAC+TGG 0.455428 1_1:-49999645 Msa0026240:CDS
TTCTGATGATGTAGGAGATT+GGG 0.456429 1_1:+50001631 None:intergenic
ATTCACATTGACTGCTTGAT+CGG 0.456516 1_1:+50000561 None:intergenic
GAATGAACTTCTCCCTGGCC+TGG 0.457614 1_1:-50002311 Msa0026240:CDS
TAAGGAACGGCACATCCATT+AGG 0.457643 1_1:+50001068 None:intergenic
TTGAGAGATGCCAATCCTCC+TGG 0.458208 1_1:+49996426 None:intergenic
TGCATGAAGAGAAGATCAAT+AGG 0.458937 1_1:-50001430 Msa0026240:CDS
TTGCGGAGAGAACGATTCTT+GGG 0.458952 1_1:-49996804 Msa0026240:CDS
GAACTTGAGCGTATACTTTG+CGG 0.459853 1_1:-49996821 Msa0026240:CDS
GGAGTTACAGAAGTCTGGTT+CGG 0.459957 1_1:-49999447 Msa0026240:CDS
AGAAGAAGATTGCATAATAT+GGG 0.461055 1_1:+50003660 None:intergenic
TTACTTGTCAAACTTTCATC+GGG 0.461212 1_1:-50003217 Msa0026240:CDS
ATCTTGCTTCAAAGCTGAAT+AGG 0.462435 1_1:+49999729 None:intergenic
AAGACGGAAGAAAACTTGTA+AGG 0.462689 1_1:+50005830 None:intergenic
CAGTAAGTTGACAGAGAAGC+TGG 0.464250 1_1:-49999834 Msa0026240:CDS
GAAAATCTGAAGATGTTCAA+TGG 0.464292 1_1:+49996853 None:intergenic
ATTACTTGTCAAACTTTCAT+CGG 0.465159 1_1:-50003218 Msa0026240:CDS
TAAGCATGGATTGATTCAAC+AGG 0.465195 1_1:-50003440 Msa0026240:CDS
AGTGGACAAACTGAACCTTC+TGG 0.465257 1_1:-50004381 Msa0026240:CDS
CTTCTGATGATGTAGGAGAT+TGG 0.465616 1_1:+50001630 None:intergenic
TTTCTTCTCAACAAGCATAC+AGG 0.466716 1_1:-50003903 Msa0026240:intron
GATCCAGAGGTTGTCCTTCA+AGG 0.468009 1_1:+50000281 None:intergenic
TTGACTGCTTGATCGGGTCT+AGG 0.468019 1_1:+50000568 None:intergenic
TCCGAAGGCATTATGTCCTC+AGG 0.468713 1_1:+50000142 None:intergenic
GAAAGAGTCCATAAAGAGAA+TGG 0.468797 1_1:+49999357 None:intergenic
TGTGTTTCCCATGTTGATCC+AGG 0.470648 1_1:-50002203 Msa0026240:intron
AAGAAAACTTGTAAGGGAAG+AGG 0.471692 1_1:+50005837 None:intergenic
CAGGGTTCGGTTTCCAATTG+GGG 0.471851 1_1:-50004748 Msa0026240:five_prime_UTR
CCACTTGCTTGCTTACAGGC+AGG 0.472378 1_1:-50003956 Msa0026240:CDS
GGGGAGTAGAAGCAATTAAT+GGG 0.473193 1_1:-50004729 Msa0026240:exon
CTATAAACTTATTCTTGGAA+AGG 0.474267 1_1:-49999192 Msa0026240:intron
TATCCAGTGTCTTCAAGCAT+TGG 0.474555 1_1:-50003999 Msa0026240:intron
CAAGCAGTCAATGTGAATGC+TGG 0.474799 1_1:-50000556 Msa0026240:CDS
AAAATCTGAAGATGTTCAAT+GGG 0.474853 1_1:+49996854 None:intergenic
CAGAGACTATCGAGTGATCA+TGG 0.475475 1_1:-50004432 Msa0026240:CDS
TTCACTGACTACAATTGTTG+GGG 0.476116 1_1:-49995879 Msa0026240:three_prime_UTR
TGTCAGGAGTTACAGAAGTC+TGG 0.479773 1_1:-49999452 Msa0026240:CDS
CGATGTAAGTTCAACACAAT+CGG 0.479828 1_1:-50004598 Msa0026240:CDS
CTTGAAGTTATTTATAAAGG+AGG 0.480655 1_1:-50001801 Msa0026240:CDS
GTCTCTGTCTATGATATTCG+TGG 0.483373 1_1:+50004448 None:intergenic
CAGGTGGAAGCCTTCAAATC+CGG 0.484304 1_1:-49998669 Msa0026240:CDS
TCGGCTTCCTCCAGGAGGAT+TGG 0.487594 1_1:-49996436 Msa0026240:CDS
AGAAACAGAATATCATAAGT+TGG 0.490252 1_1:+50000001 None:intergenic
GTTGATGCAACTGTCAAGTC+TGG 0.490324 1_1:-49998702 Msa0026240:CDS
GATTCCTGATTAATATAGAA+AGG 0.490377 1_1:+50001174 None:intergenic
ACCTGAGGACATAATGCCTT+CGG 0.490897 1_1:-50000143 Msa0026240:CDS
TGGAGGAAGCCGAGGTGTGC+CGG 0.491431 1_1:+49996446 None:intergenic
CAAGAGAATGAAGTCATGAT+AGG 0.494168 1_1:+49996036 None:intergenic
TAGGTAGGTCTGTGTCTGCT+TGG 0.494170 1_1:+49996267 None:intergenic
TCCGAATAATCAACTAGCAT+TGG 0.494261 1_1:-50002281 Msa0026240:CDS
TGGTGTTAAGAGTGCCTCAA+TGG 0.495645 1_1:+50001766 None:intergenic
AAAAGTGTAACACAGGCACT+TGG 0.496525 1_1:+50001661 None:intergenic
TTCTGTCCTCTGTATAGAAA+CGG 0.497806 1_1:-49995818 Msa0026240:three_prime_UTR
ATTCCTGATTAATATAGAAA+GGG 0.497877 1_1:+50001175 None:intergenic
AAGATGCAAGTACTTCAAAC+TGG 0.497996 1_1:-49999711 Msa0026240:CDS
TTTCTTCTTAAAAGCTTGGA+AGG 0.499941 1_1:-49999983 Msa0026240:CDS
GGAAGTATCCATGTCATCAT+GGG 0.500695 1_1:+50004566 None:intergenic
CACAGCAAGTTGCTTTCTTG+GGG 0.501966 1_1:-49995917 Msa0026240:three_prime_UTR
GACTCTATGGCAGTCTGCGT+TGG 0.502622 1_1:-49999797 Msa0026240:CDS
TTGAAGTTATTTATAAAGGA+GGG 0.503425 1_1:-50001800 Msa0026240:CDS
ACAGCCTCCATGAAAGGTGT+GGG 0.503968 1_1:+50003684 None:intergenic
AAGCAGTCAATGTGAATGCT+GGG 0.505662 1_1:-50000555 Msa0026240:CDS
AACTGAACCTTCTGGTCAGT+TGG 0.508583 1_1:-50004373 Msa0026240:CDS
AGGAAGTATCCATGTCATCA+TGG 0.508828 1_1:+50004565 None:intergenic
GTATCAACGTCTCAGCTTGT+TGG 0.509233 1_1:-50003106 Msa0026240:CDS
CCAGAGAAGGATTCAGCTGA+TGG 0.509910 1_1:-50004513 Msa0026240:CDS
TGCAGTACCCTACCAAGCTC+AGG 0.510678 1_1:+49999031 None:intergenic
GGCACACCTCGGCTTCCTCC+AGG 0.511572 1_1:-49996444 Msa0026240:CDS
AGAAGTCTGGTTCGGGCATG+TGG 0.511577 1_1:-49999439 Msa0026240:CDS
TTCGCAGAGTTCAGTGAGTA+CGG 0.511720 1_1:+50004350 None:intergenic
CACTTGATCCTGAGCTTGGT+AGG 0.513265 1_1:-49999039 Msa0026240:CDS
AGAGAAGATCAATAGGGTAC+TGG 0.515205 1_1:-50001423 Msa0026240:CDS
GAGGATGAGAAATTATCATC+TGG 0.518325 1_1:-50000900 Msa0026240:CDS
GGAATGCTCGTCGTTGGCCA+TGG 0.520361 1_1:+49996481 None:intergenic
GACCAAATCTGGCATGCTTG+TGG 0.520594 1_1:-50002032 Msa0026240:CDS
CATCCATCCCAAGCTTCTGC+AGG 0.522550 1_1:+50002224 None:intergenic
CTTCAAATCCGGCTTTAACC+AGG 0.522768 1_1:-49998658 Msa0026240:intron
GCATATTAAAACAAAATACT+TGG 0.524480 1_1:-50001561 Msa0026240:CDS
TTCAAGAACCACTTTATGAC+TGG 0.525002 1_1:+49999538 None:intergenic
TCGGATGAACTTTGTAAGCA+TGG 0.525137 1_1:-50003454 Msa0026240:CDS
TGTATCCTTACATTGACAAT+GGG 0.526252 1_1:+49996613 None:intergenic
GATCTGTATCCTCGATCAGC+TGG 0.526965 1_1:-50004189 Msa0026240:CDS
TATCACTTGGCCAATATATG+GGG 0.528827 1_1:-50001310 Msa0026240:CDS
GGGGAAAACAAGGGGATGCA+TGG 0.529152 1_1:-50001290 Msa0026240:CDS
TTGCTGAATGAACTTCTCCC+TGG 0.529652 1_1:-50002316 Msa0026240:CDS
CTGTGAAGGAAATTCTGAGT+TGG 0.530317 1_1:-49998963 Msa0026240:CDS
AGAAGCTGGAGCAACAGATG+AGG 0.530960 1_1:-49999820 Msa0026240:CDS
TTTGCAAGCTTTACAAGTAG+TGG 0.532154 1_1:+50004270 None:intergenic
CTGCACGCTCTCTTATCAGC+TGG 0.532896 1_1:+50004666 None:intergenic
TAGATAACAACATTATCTCT+GGG 0.534042 1_1:+50004235 None:intergenic
CCAAAGGGAACAACGCTAGC+AGG 0.534756 1_1:+49995714 None:intergenic
AGTGACAGGCGACTGGGCCA+TGG 0.535099 1_1:-49999638 Msa0026240:CDS
CACTTGCTTGCTTACAGGCA+GGG 0.535547 1_1:-50003955 Msa0026240:CDS
AAAGTGTAACACAGGCACTT+GGG 0.538825 1_1:+50001662 None:intergenic
ATCTGGATGATTAGCTAGGA+AGG 0.539146 1_1:+50002249 None:intergenic
TCATAAAGTGGTTCTTGAAG+TGG 0.540987 1_1:-49999534 Msa0026240:CDS
ATCTTCTTCTATATGAGGAT+CGG 0.543387 1_1:-50003647 Msa0026240:CDS
GTATCAAGACGTAGCCGACC+AGG 0.543633 1_1:-50004109 Msa0026240:intron
TTCTCATTCCTCAGAAATGT+CGG 0.543799 1_1:-50003473 Msa0026240:CDS
ACTACATGCCAGTCATAAAG+TGG 0.544099 1_1:-49999546 Msa0026240:CDS
GCTTTGTTGCTACAAGATGC+AGG 0.544451 1_1:+50000325 None:intergenic
ACAAAACGTACTTTCAGGCA+AGG 0.545702 1_1:+50001044 None:intergenic
TGTTGGTGGACACTGTAATC+GGG 0.545964 1_1:-50003089 Msa0026240:intron
AAAGACAAACTTGCAGGCTG+AGG 0.546000 1_1:-49999390 Msa0026240:CDS
GATTATCTCAGCTATCTGTA+AGG 0.546532 1_1:+50001847 None:intergenic
TCTTCTATATGAGGATCGGC+AGG 0.547401 1_1:-50003643 Msa0026240:intron
CGTACTTTCAGGCAAGGGTA+AGG 0.547506 1_1:+50001050 None:intergenic
TTGTCAACACAAGATACATC+TGG 0.550545 1_1:-49999323 Msa0026240:CDS
TAACAAGTCTGAAGTCATGC+TGG 0.550885 1_1:+50004296 None:intergenic
GAAGCTGGAGCAACAGATGA+GGG 0.553462 1_1:-49999819 Msa0026240:CDS
CACAGCCTCCATGAAAGGTG+TGG 0.554075 1_1:+50003683 None:intergenic
TTATTGTGAGGTGGCATTCG+TGG 0.554265 1_1:+49999674 None:intergenic
GGAGATCTGGATGATTAGCT+AGG 0.556095 1_1:+50002245 None:intergenic
GCATTCCTCCAGTTCGTGAC+CGG 0.556754 1_1:-49996465 Msa0026240:CDS
CTAAAGCACTTCAAGACGGA+AGG 0.557300 1_1:-49999244 Msa0026240:CDS
GAATAGACATCCATGGCAAA+CGG 0.558982 1_1:+50002078 None:intergenic
TATGGACAAGCTTATTGGCA+AGG 0.559664 1_1:-50001393 Msa0026240:CDS
GAAAGGTGTGGGGCTTTCTG+AGG 0.560626 1_1:+50003695 None:intergenic
GTGCAGCGGACTCCAAGATC+CGG 0.561984 1_1:+49999579 None:intergenic
ACTTGCTTGCTTACAGGCAG+GGG 0.563872 1_1:-50003954 Msa0026240:CDS
GCAGAATCAGACTCAAAACT+AGG 0.564474 1_1:-50000358 Msa0026240:CDS
CAAGTCTGGAATTTCAAGAC+AGG 0.565412 1_1:-49998688 Msa0026240:CDS
GCATGAAGAGAAGATCAATA+GGG 0.565762 1_1:-50001429 Msa0026240:CDS
TCAACGTCTCAGCTTGTTGG+TGG 0.566127 1_1:-50003103 Msa0026240:CDS
GTTTCAGAGTTATTGTGAGG+TGG 0.566228 1_1:+49999665 None:intergenic
ACTCTGAAACAGTAAGTGAC+AGG 0.566598 1_1:-49999652 Msa0026240:CDS
AACTCATTTAGTTGGACAGA+AGG 0.567918 1_1:+49999863 None:intergenic
AACGACAGTTGAACGCCACT+AGG 0.569474 1_1:+50001719 None:intergenic
AGGGGTGTGTCGCCAGAGAG+AGG 0.571420 1_1:+50001194 None:intergenic
AAGTTCAACACAATCGGCAA+TGG 0.572318 1_1:-50004592 Msa0026240:CDS
ATTGATGAAAACCAGAGAAG+AGG 0.572627 1_1:+50005800 None:intergenic
ATGTATCCTTACATTGACAA+TGG 0.572984 1_1:+49996612 None:intergenic
GTGAGAGACCTGGTTAAAGC+CGG 0.573287 1_1:+49998650 None:intergenic
GTCTGGAATTTCAAGACAGG+TGG 0.575671 1_1:-49998685 Msa0026240:CDS
TAAGTGAAACATAATCCTCC+AGG 0.575930 1_1:+49998727 None:intergenic
TGTTTGGAATCGGTCTGTGA+AGG 0.576631 1_1:-49998977 Msa0026240:CDS
ACTATTATATCAAGCTTGAG+TGG 0.577573 1_1:-50004399 Msa0026240:CDS
TAAAACAAAATACTTGGCAC+CGG 0.578309 1_1:-50001555 Msa0026240:CDS
ACTTGATCCTGAGCTTGGTA+GGG 0.579205 1_1:-49999038 Msa0026240:CDS
TTCAATTGCCATCAAATACA+AGG 0.580500 1_1:-50000845 Msa0026240:CDS
AAGTGTAACACAGGCACTTG+GGG 0.583851 1_1:+50001663 None:intergenic
TTTCGGACAATAGTCAACTT+CGG 0.583993 1_1:+49996402 None:intergenic
CGATTGTGTTGAACTTACAT+CGG 0.584306 1_1:+50004599 None:intergenic
AGTGTAAATAGTATTCAAGA+GGG 0.584620 1_1:+50005871 None:intergenic
GCAAGTTTATCCGTTTGCCA+TGG 0.584844 1_1:-50002088 Msa0026240:CDS
CCAGCAATCTCAGAACGTGC+AGG 0.586068 1_1:-50000804 Msa0026240:CDS
CACTGACTACAATTGTTGGG+GGG 0.587521 1_1:-49995877 Msa0026240:three_prime_UTR
ATGGGCACAGCCTCCATGAA+AGG 0.588680 1_1:+50003678 None:intergenic
AGACGGAAGAAAACTTGTAA+GGG 0.588717 1_1:+50005831 None:intergenic
GTTGGCCATGGTCAAACTCT+CGG 0.589724 1_1:+49996493 None:intergenic
CAGTCACTTGATCCTGAGCT+TGG 0.590188 1_1:-49999043 Msa0026240:CDS
CAAAACGTACTTTCAGGCAA+GGG 0.590578 1_1:+50001045 None:intergenic
TATGATGAAGAAGTGGGCAC+TGG 0.590871 1_1:-49999509 Msa0026240:CDS
AAGCAATTAATGGGAAGTAG+AGG 0.591066 1_1:-50004720 Msa0026240:exon
GTAACAGCAGATGTACCAAA+GGG 0.591833 1_1:+49995699 None:intergenic
TCTGCATTTGACCTCTCACA+TGG 0.593150 1_1:-50003130 Msa0026240:CDS
AAAGGTGTGGGGCTTTCTGA+GGG 0.593542 1_1:+50003696 None:intergenic
GAGAATGAAGTCATGATAGG+TGG 0.593766 1_1:+49996039 None:intergenic
AGTAACAGCAGATGTACCAA+AGG 0.593777 1_1:+49995698 None:intergenic
ACTGAGGCGGTAGAAGAACT+AGG 0.594306 1_1:+50004627 None:intergenic
ACTGGAGGAATGCTCGTCGT+TGG 0.594696 1_1:+49996475 None:intergenic
TGTCGTTAGACTCTGGTCAA+AGG 0.595438 1_1:-50001703 Msa0026240:CDS
GTTCAACTGTCGTTAGACTC+TGG 0.597960 1_1:-50001710 Msa0026240:CDS
GTCTGCTTCAAGCCATTCAG+AGG 0.598638 1_1:-50004541 Msa0026240:CDS
AGAAAACTTGTAAGGGAAGA+GGG 0.598768 1_1:+50005838 None:intergenic
TAACTCATACAAAGTCCTGA+AGG 0.598862 1_1:+50003183 None:intergenic
AATGCTAAAACTTTATCATG+AGG 0.600450 1_1:+50000094 None:intergenic
AATAACTGATTACACCAGAA+AGG 0.600465 1_1:+49999767 None:intergenic
TCTCCTGCAGAAGCTTGGGA+TGG 0.601685 1_1:-50002227 Msa0026240:CDS
TAGTGTAAATAGTATTCAAG+AGG 0.603649 1_1:+50005870 None:intergenic
TGTGTTGACAACCATGGACG+AGG 0.605284 1_1:+49999335 None:intergenic
CTCTTGTATGCCATAACAGA+GGG 0.605670 1_1:-49996074 Msa0026240:CDS
GACTGCTAGCTGTGTAACCA+TGG 0.608389 1_1:+49996638 None:intergenic
GCTTCAAAGCTGAATAGGAA+AGG 0.609600 1_1:+49999734 None:intergenic
TAGTTTCATCATTTGTGCAG+CGG 0.609816 1_1:+49999565 None:intergenic
TTCAGAGGAAGAGCCAGAGA+AGG 0.609977 1_1:-50004526 Msa0026240:CDS
TCAAAATTGGTGTACCCTAG+TGG 0.610121 1_1:-50001734 Msa0026240:CDS
AGAACAGTATCAGGATACCC+AGG 0.611242 1_1:+49998881 None:intergenic
TTAACTAACCTGGATCAACA+TGG 0.611270 1_1:+50002195 None:intergenic
TGGTTCGGGCATGTGGAGAG+AGG 0.612565 1_1:-49999432 Msa0026240:CDS
TGCTGGAACTTCATCTACAC+AGG 0.614672 1_1:+50000821 None:intergenic
GAAGTTGACTATTGTCCGAA+AGG 0.615155 1_1:-49996400 Msa0026240:intron
AAGTTCATCCGACATTTCTG+AGG 0.615184 1_1:+50003465 None:intergenic
TAACTAACCTGGATCAACAT+GGG 0.616198 1_1:+50002196 None:intergenic
TGCCCTCCGTTTCTATACAG+AGG 0.616284 1_1:+49995812 None:intergenic
ACAGTAAGTGACAGGCGACT+GGG 0.618520 1_1:-49999644 Msa0026240:CDS
GTAGGTAAATATGAGAAACC+TGG 0.620092 1_1:-49998745 Msa0026240:intron
TCACTGACTACAATTGTTGG+GGG 0.620886 1_1:-49995878 Msa0026240:three_prime_UTR
TCAAAGGTCTGCTTCTAGAG+AGG 0.621716 1_1:-50001687 Msa0026240:CDS
AGTACGGCCAACTGACCAGA+AGG 0.621879 1_1:+50004366 None:intergenic
ATCCTTACATTGACAATGGG+AGG 0.622117 1_1:+49996616 None:intergenic
AATCCTCCTGGAGGAAGCCG+AGG 0.623954 1_1:+49996438 None:intergenic
GAGAAGAGGATGATTGAAGA+CGG 0.624715 1_1:+50005814 None:intergenic
AGAGTCAATTTAGGATCCAG+AGG 0.625003 1_1:+50000268 None:intergenic
TGAAAGATATCTATGGCCAA+AGG 0.627351 1_1:-50000940 Msa0026240:CDS
ACTGTTTCAGAGTTATTGTG+AGG 0.627647 1_1:+49999662 None:intergenic
TGAATGGCTTGAAGCAGACG+AGG 0.628567 1_1:+50004545 None:intergenic
ATCACTTGGCCAATATATGG+GGG 0.630224 1_1:-50001309 Msa0026240:CDS
GGAAATTCTGAGTTGGAACA+GGG 0.632000 1_1:-49998956 Msa0026240:CDS
ACGACAGTTGAACGCCACTA+GGG 0.633007 1_1:+50001720 None:intergenic
TTGCTTGAGTGACTGTGCTG+AGG 0.633950 1_1:-50001003 Msa0026240:CDS
TTTGATGGCAATTGAAGCGG+TGG 0.634055 1_1:+50000852 None:intergenic
ACTTACATCGGTTTGAACTG+AGG 0.634578 1_1:+50004611 None:intergenic
TTCCTGATTAATATAGAAAG+GGG 0.636899 1_1:+50001176 None:intergenic
CGGACTCCAAGATCCGGTCG+CGG 0.637555 1_1:+49999585 None:intergenic
GTTGCTAAAGCACTTCAAGA+CGG 0.639670 1_1:-49999248 Msa0026240:CDS
GTATTTGATGGCAATTGAAG+CGG 0.640188 1_1:+50000849 None:intergenic
GTGTGCCGGTCACGAACTGG+AGG 0.640971 1_1:+49996460 None:intergenic
GACAGATCTATGTGAAACAC+AGG 0.642506 1_1:-50000775 Msa0026240:intron
AACGGCACATCCATTAGGAA+CGG 0.644121 1_1:+50001073 None:intergenic
AGTGGAATATGATGAAGAAG+TGG 0.644187 1_1:-49999516 Msa0026240:CDS
CAGCCTCCATGAAAGGTGTG+GGG 0.644954 1_1:+50003685 None:intergenic
TAAAGCACTTCAAGACGGAA+GGG 0.648126 1_1:-49999243 Msa0026240:CDS
TATGCCATAACAGAGGGTCA+AGG 0.648375 1_1:-49996068 Msa0026240:CDS
AACGATTAAGAACTATAACT+AGG 0.649164 1_1:-50005592 Msa0026240:intron
ACATGACGAATAGACATCCA+TGG 0.650937 1_1:+50002071 None:intergenic
TTTGCACAAGTCATCACACT+AGG 0.653690 1_1:+49996248 None:intergenic
TTGAGCATGTCGACTGACGC+AGG 0.655636 1_1:-50001464 Msa0026240:CDS
TTAATTGGGATAGAGTCGCT+CGG 0.655783 1_1:+50003392 None:intergenic
TGTCCTCTGTATAGAAACGG+AGG 0.656728 1_1:-49995815 Msa0026240:three_prime_UTR
ACACCTCGGCTTCCTCCAGG+AGG 0.656878 1_1:-49996441 Msa0026240:CDS
ATTATCCGAGAGTTTGACCA+TGG 0.657833 1_1:-49996498 Msa0026240:CDS
GGAAGTACCAATTACCTGGT+CGG 0.658490 1_1:+50004095 None:intergenic
GATCACATTAAGTTCGACCA+TGG 0.659611 1_1:-49996655 Msa0026240:CDS
CTGTAACTCCTGACACACCA+AGG 0.659651 1_1:+49999460 None:intergenic
TACATCGGTTTGAACTGAGG+CGG 0.660125 1_1:+50004614 None:intergenic
GATGAAGAATGACAATCCGA+AGG 0.664348 1_1:+50000127 None:intergenic
CGGAGAGAACGATTCTTGGG+CGG 0.665814 1_1:-49996801 Msa0026240:intron
CCTGCCTGTAAGCAAGCAAG+TGG 0.667610 1_1:+50003956 None:intergenic
AATGGAGCCCCATGATGACA+TGG 0.667701 1_1:-50004574 Msa0026240:CDS
GCGAGTGGCTCTTTCTACTG+TGG 0.668144 1_1:-50003739 Msa0026240:CDS
ACGTTGATACACCATGTGAG+AGG 0.674768 1_1:+50003119 None:intergenic
ACAAGAAAACCAGCTGATCG+AGG 0.674778 1_1:+50004180 None:intergenic
GTGGTGTTAGTGCAAAATTG+TGG 0.675315 1_1:-50000204 Msa0026240:CDS
CACAAGTCATCACACTAGGT+AGG 0.681659 1_1:+49996252 None:intergenic
GAAGTATCCATGTCATCATG+GGG 0.681660 1_1:+50004567 None:intergenic
GCTCTTGTATGCCATAACAG+AGG 0.682277 1_1:-49996075 Msa0026240:CDS
AGCAGTCAATGTGAATGCTG+GGG 0.683168 1_1:-50000554 Msa0026240:CDS
TCTTTCGAGGCAATGCACCA+TGG 0.683196 1_1:+49999621 None:intergenic
AAACTTGTAAGGGAAGAGGG+TGG 0.684353 1_1:+50005841 None:intergenic
GTCCTCTGTATAGAAACGGA+GGG 0.684945 1_1:-49995814 Msa0026240:three_prime_UTR
GTGGAATATGATGAAGAAGT+GGG 0.686774 1_1:-49999515 Msa0026240:CDS
TTTCAGGCAAGGGTAAGGAA+CGG 0.690592 1_1:+50001055 None:intergenic
ATAGTAAAACAAAATGACAG+TGG 0.691364 1_1:-50000223 Msa0026240:CDS
GGTAAATATGAGAAACCTGG+AGG 0.695517 1_1:-49998742 Msa0026240:CDS
AGTTCGTGACCGGCACACCT+CGG 0.697122 1_1:-49996455 Msa0026240:CDS
TAGAGCAGCTGTGAAACCTG+AGG 0.698518 1_1:-50000158 Msa0026240:CDS
AGAGATGCCAATCCTCCTGG+AGG 0.712039 1_1:+49996429 None:intergenic
GTATCTTGTGTTGACAACCA+TGG 0.715781 1_1:+49999329 None:intergenic
TTCAGGGTCTGATCACACCA+TGG 0.719758 1_1:-49998855 Msa0026240:intron
TCAACACAAGATACATCTGG+TGG 0.725886 1_1:-49999320 Msa0026240:CDS
AAGCCCCACACCTTTCATGG+AGG 0.732117 1_1:-50003688 Msa0026240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATAAAAAATAAAAA+AGG + chr1_1:49998224-49998243 None:intergenic 0.0%
!!! AATATTTTAAATCATTAGAT+TGG - chr1_1:49997734-49997753 Msa0026240:intron 10.0%
!! ATGAAAAAAAAAAATGAATA+TGG - chr1_1:50003051-50003070 Msa0026240:intron 10.0%
!! TGAAAAAAAAAAATGAATAT+GGG - chr1_1:50003052-50003071 Msa0026240:intron 10.0%
!! TTATAGAGAATATTAATTTA+AGG - chr1_1:50003178-50003197 Msa0026240:CDS 10.0%
!! TATAGAGAATATTAATTTAA+GGG - chr1_1:50003179-50003198 Msa0026240:CDS 10.0%
!!! ATTTTAATGACTAATTAACT+GGG - chr1_1:49996527-49996546 Msa0026240:intron 15.0%
!!! TTTTAAGAAAGAAAATGAAA+AGG + chr1_1:49996661-49996680 None:intergenic 15.0%
!! GCTTACATTATAAATTAATT+GGG + chr1_1:49998165-49998184 None:intergenic 15.0%
!! TGCTTACATTATAAATTAAT+TGG + chr1_1:49998166-49998185 None:intergenic 15.0%
!! AAATAAAAAAGGAGAAATAT+AGG + chr1_1:49998213-49998232 None:intergenic 15.0%
!! TTTATGATAAAGAGAAATTT+AGG - chr1_1:49998892-49998911 Msa0026240:CDS 15.0%
!! GTATTTAATTGTAGTAAAAA+CGG + chr1_1:49999398-49999417 None:intergenic 15.0%
!!! AAATATCAGAAAAATTTTGA+AGG + chr1_1:49999718-49999737 None:intergenic 15.0%
!! TTTCTTGAAGTTATTTATAA+AGG - chr1_1:49999736-49999755 Msa0026240:CDS 15.0%
!!! ACAAATAAATTTTTCCTTTT+AGG - chr1_1:50002262-50002281 Msa0026240:CDS 15.0%
!! TCAAAATGATCATAAAATAA+TGG + chr1_1:50004037-50004056 None:intergenic 15.0%
!! ATATAAATAAGAAATGACTT+CGG + chr1_1:50004581-50004600 None:intergenic 15.0%
!!! TATTTTTTTTTAAAACTTGC+AGG - chr1_1:50004658-50004677 Msa0026240:CDS 15.0%
!!! GAAACTTTTTGTTTAAAAAA+AGG - chr1_1:50004819-50004838 Msa0026240:intron 15.0%
!!! TTTTTGTTGCAACAAAAATT+TGG - chr1_1:49995907-49995926 Msa0026240:three_prime_UTR 20.0%
!! CAAAACAAAAACAATTTGAA+TGG + chr1_1:49995991-49996010 None:intergenic 20.0%
!!! GTTTGTTTTTGTTTCTATTA+TGG - chr1_1:49996092-49996111 Msa0026240:CDS 20.0%
!! AATAACCAAATCAAACAAAA+AGG + chr1_1:49996183-49996202 None:intergenic 20.0%
!!! GATTTTAATGACTAATTAAC+TGG - chr1_1:49996526-49996545 Msa0026240:intron 20.0%
!!! TTTTAATGACTAATTAACTG+GGG - chr1_1:49996528-49996547 Msa0026240:intron 20.0%
!!! ACATAAACAATATCAGTTTT+TGG - chr1_1:49996684-49996703 Msa0026240:intron 20.0%
!! AGATAATGTTGTTATCTATA+AGG - chr1_1:49997310-49997329 Msa0026240:intron 20.0%
!! GATAATGTTGTTATCTATAA+GGG - chr1_1:49997311-49997330 Msa0026240:intron 20.0%
!! AAAAACATATCTTACAAACA+AGG + chr1_1:49997469-49997488 None:intergenic 20.0%
!! CAGTAAAGAATACAAAAAAA+AGG + chr1_1:49997978-49997997 None:intergenic 20.0%
!! TCAACTTCTTAAAAAAAGTA+AGG + chr1_1:49998798-49998817 None:intergenic 20.0%
!!! TAATTCTTGTTTAATACAAG+TGG - chr1_1:49999015-49999034 Msa0026240:CDS 20.0%
!! TTGAAGTTATTTATAAAGGA+GGG - chr1_1:49999740-49999759 Msa0026240:CDS 20.0%
!! GCATATTAAAACAAAATACT+TGG - chr1_1:49999979-49999998 Msa0026240:CDS 20.0%
!! CTTCTTAATTATTTATCACT+TGG - chr1_1:50000217-50000236 Msa0026240:CDS 20.0%
!! ATTCCTGATTAATATAGAAA+GGG + chr1_1:50000368-50000387 None:intergenic 20.0%
!! AGAACAAGATAAATTTACTA+GGG + chr1_1:50000849-50000868 None:intergenic 20.0%
!! AAGAACAAGATAAATTTACT+AGG + chr1_1:50000850-50000869 None:intergenic 20.0%
!! AGTAAATTTATCTTGTTCTT+AGG - chr1_1:50000850-50000869 Msa0026240:CDS 20.0%
!! GTAAATTTATCTTGTTCTTA+GGG - chr1_1:50000851-50000870 Msa0026240:CDS 20.0%
!!! AAACTTATTTTTTACCTTGA+AGG - chr1_1:50001245-50001264 Msa0026240:CDS 20.0%
!!! TGTCATTTTGTTTTACTATT+TGG + chr1_1:50001316-50001335 None:intergenic 20.0%
!! TTTATATTCCAACAACAAAA+GGG + chr1_1:50002754-50002773 None:intergenic 20.0%
!!! TATTTTAACCATAACCTTTT+TGG - chr1_1:50002935-50002954 Msa0026240:intron 20.0%
!!! AAAGAAAATAGAAGCATTAT+TGG - chr1_1:50003802-50003821 Msa0026240:intron 20.0%
!!! AGAAGTTAGTTGATTATTTT+AGG - chr1_1:50003848-50003867 Msa0026240:intron 20.0%
!!! GAAGTTAGTTGATTATTTTA+GGG - chr1_1:50003849-50003868 Msa0026240:intron 20.0%
!!! TAAAGATGGAATTATTTTCT+TGG - chr1_1:50003894-50003913 Msa0026240:intron 20.0%
!!! GGTATTTAATTTTCTTTGTT+TGG - chr1_1:50004092-50004111 Msa0026240:intron 20.0%
!! AAGTAAAAGAAACAAATGTT+AGG + chr1_1:50004132-50004151 None:intergenic 20.0%
!!! TTTACTTTTTTGTCATGAAA+AGG - chr1_1:50004145-50004164 Msa0026240:CDS 20.0%
!!! GAATAATTTGACTTAATAGA+AGG - chr1_1:50004210-50004229 Msa0026240:CDS 20.0%
!!! TGTGGTCTTATTTATAATTT+GGG - chr1_1:50004305-50004324 Msa0026240:CDS 20.0%
!!! AATATATTGATAGTTAGAAC+TGG - chr1_1:50004469-50004488 Msa0026240:CDS 20.0%
!!! ATATATTGATAGTTAGAACT+GGG - chr1_1:50004470-50004489 Msa0026240:CDS 20.0%
!!! TATTGTTTTGATCTTATGTT+CGG - chr1_1:50004962-50004981 Msa0026240:intron 20.0%
!!! GGAATCCTTTTTTTTTTTTT+TGG - chr1_1:50004983-50005002 Msa0026240:intron 20.0%
!! TCAGTCCAAAAAAAAAAAAA+AGG + chr1_1:50004991-50005010 None:intergenic 20.0%
!! ATAAGATGTTACAAAGAAAA+AGG + chr1_1:50005223-50005242 None:intergenic 20.0%
!!! ATTTTGAAGGTGTAATTATT+AGG - chr1_1:50005546-50005565 Msa0026240:intron 20.0%
!!! TTTTGAAGGTGTAATTATTA+GGG - chr1_1:50005547-50005566 Msa0026240:intron 20.0%
!!! TTTTGTACAGTATTTAGTAT+TGG - chr1_1:50005778-50005797 Msa0026240:intron 20.0%
!! TTTGTACAGTATTTAGTATT+GGG - chr1_1:50005779-50005798 Msa0026240:intron 20.0%
!! TAAATGGCTATTAATCATTA+AGG + chr1_1:50005806-50005825 None:intergenic 20.0%
! AGTGTAAATAGTATTCAAGA+GGG + chr1_1:49995672-49995691 None:intergenic 25.0%
! TAGTGTAAATAGTATTCAAG+AGG + chr1_1:49995673-49995692 None:intergenic 25.0%
! AACGATTAAGAACTATAACT+AGG - chr1_1:49995948-49995967 Msa0026240:three_prime_UTR 25.0%
! ACTATAACTAGGTATTTCAT+CGG - chr1_1:49995959-49995978 Msa0026240:three_prime_UTR 25.0%
!!! TATTAGCTTTTGCAAAAACA+TGG - chr1_1:49996316-49996335 Msa0026240:intron 25.0%
!!! TTACTTTTTTGGGAGAATTA+AGG - chr1_1:49996504-49996523 Msa0026240:CDS 25.0%
! GTTTGATCAATAGAAAAGTT+TGG - chr1_1:49996605-49996624 Msa0026240:intron 25.0%
!! TGACTTATTTGGTCTTTATA+TGG - chr1_1:49996717-49996736 Msa0026240:intron 25.0%
!! TATTTGGTCTTTATATGGTT+AGG - chr1_1:49996722-49996741 Msa0026240:intron 25.0%
! TAGATAACAACATTATCTCT+GGG + chr1_1:49997308-49997327 None:intergenic 25.0%
! ATAGATAACAACATTATCTC+TGG + chr1_1:49997309-49997328 None:intergenic 25.0%
!!! AAGTATTGACAGTTCATTTT+TGG - chr1_1:49997691-49997710 Msa0026240:intron 25.0%
! AGAAGAAGATTGCATAATAT+GGG + chr1_1:49997883-49997902 None:intergenic 25.0%
! TAGAAGAAGATTGCATAATA+TGG + chr1_1:49997884-49997903 None:intergenic 25.0%
!!! ATCAACAATTTTGATTAAGC+AGG + chr1_1:49998042-49998061 None:intergenic 25.0%
!!! AATCTATTATTTTGCTTGAC+AGG - chr1_1:49998289-49998308 Msa0026240:intron 25.0%
!!! ATCTATTATTTTGCTTGACA+GGG - chr1_1:49998290-49998309 Msa0026240:intron 25.0%
! ATTACTTGTCAAACTTTCAT+CGG - chr1_1:49998322-49998341 Msa0026240:intron 25.0%
!! TAGATAAAGGATACTTTTAG+GGG + chr1_1:49998682-49998701 None:intergenic 25.0%
!! GTAGATAAAGGATACTTTTA+GGG + chr1_1:49998683-49998702 None:intergenic 25.0%
!! TGTAGATAAAGGATACTTTT+AGG + chr1_1:49998684-49998703 None:intergenic 25.0%
! TACTGTTAATGTGTAGATAA+AGG + chr1_1:49998695-49998714 None:intergenic 25.0%
!! TCATTGGATATCTGAATTTT+AGG - chr1_1:49998923-49998942 Msa0026240:CDS 25.0%
! GGAAATTTATGAAGTCTTTA+TGG - chr1_1:49998944-49998963 Msa0026240:CDS 25.0%
! TAGAAGAAAATTAACTAACC+TGG + chr1_1:49999358-49999377 None:intergenic 25.0%
! TAAATAATATAGCAACTCCA+AGG + chr1_1:49999581-49999600 None:intergenic 25.0%
!!! TTTAAGGTATTGACTTTATC+TGG - chr1_1:49999608-49999627 Msa0026240:CDS 25.0%
! CTTGAAGTTATTTATAAAGG+AGG - chr1_1:49999739-49999758 Msa0026240:CDS 25.0%
! TTCTCAGAATCATATAATTC+CGG + chr1_1:50000007-50000026 None:intergenic 25.0%
!! GAATTATATGATTCTGAGAA+AGG - chr1_1:50000007-50000026 Msa0026240:CDS 25.0%
!! ACTTTTGAATTTATTGAGAG+TGG - chr1_1:50000181-50000200 Msa0026240:CDS 25.0%
! TTCCTGATTAATATAGAAAG+GGG + chr1_1:50000367-50000386 None:intergenic 25.0%
! GATTCCTGATTAATATAGAA+AGG + chr1_1:50000369-50000388 None:intergenic 25.0%
! ACTCAATTGAAAGATATCTA+TGG - chr1_1:50000593-50000612 Msa0026240:CDS 25.0%
! AACAAGATAAATTTACTAGG+GGG + chr1_1:50000847-50000866 None:intergenic 25.0%
! GAACAAGATAAATTTACTAG+GGG + chr1_1:50000848-50000867 None:intergenic 25.0%
! ATGAAGAATTTCAACTATAC+TGG - chr1_1:50000917-50000936 Msa0026240:CDS 25.0%
!!! TTTTAATCTTGTTACTGGTT+AGG - chr1_1:50001033-50001052 Msa0026240:CDS 25.0%
! ATAGTAAAACAAAATGACAG+TGG - chr1_1:50001317-50001336 Msa0026240:CDS 25.0%
! AATGCTAAAACTTTATCATG+AGG + chr1_1:50001449-50001468 None:intergenic 25.0%
!!! AAGTTTTAGCATTATATCAG+CGG - chr1_1:50001456-50001475 Msa0026240:CDS 25.0%
! TAGAACATGTCTGATAAAAA+AGG + chr1_1:50001485-50001504 None:intergenic 25.0%
! AGAAACAGAATATCATAAGT+TGG + chr1_1:50001542-50001561 None:intergenic 25.0%
! TAAACTAAAAACTTCTTTCG+AGG + chr1_1:50001935-50001954 None:intergenic 25.0%
! AAGGTATAAAATTCCAAAGT+TGG + chr1_1:50002064-50002083 None:intergenic 25.0%
!!! AACTTTGGAATTTTATACCT+TGG - chr1_1:50002063-50002082 Msa0026240:CDS 25.0%
! TCCAAGAATAAGTTTATAGA+AGG + chr1_1:50002347-50002366 None:intergenic 25.0%
! CTATAAACTTATTCTTGGAA+AGG - chr1_1:50002348-50002367 Msa0026240:intron 25.0%
!!! TTGGAAAGGTAATTGATTTT+GGG - chr1_1:50002362-50002381 Msa0026240:intron 25.0%
! CAAGTTATAAGCAAATAGAA+AGG + chr1_1:50002447-50002466 None:intergenic 25.0%
!!! TGCTTATAACTTGTCTTTTT+AGG - chr1_1:50002454-50002473 Msa0026240:intron 25.0%
!! AGTTAACAGGAAATTTTGTT+TGG - chr1_1:50002547-50002566 Msa0026240:intron 25.0%
!! TATCAAGCAATATTTTACCA+TGG + chr1_1:50002705-50002724 None:intergenic 25.0%
! GTTTATATTCCAACAACAAA+AGG + chr1_1:50002755-50002774 None:intergenic 25.0%
! ACTTAATATTTCATCCTGTT+TGG - chr1_1:50002773-50002792 Msa0026240:intron 25.0%
! TGAATATAACACAACCAAAA+AGG + chr1_1:50002952-50002971 None:intergenic 25.0%
! GGGAACTAAAAAATTGTATT+GGG - chr1_1:50003595-50003614 Msa0026240:intron 25.0%
! GGAACTAAAAAATTGTATTG+GGG - chr1_1:50003596-50003615 Msa0026240:intron 25.0%
! GAACTAAAAAATTGTATTGG+GGG - chr1_1:50003597-50003616 Msa0026240:intron 25.0%
!!! TGAAACTTGTTGAGATTTTA+AGG + chr1_1:50003766-50003785 None:intergenic 25.0%
!! ACTTGTTAAAAAGCTAAAGA+TGG - chr1_1:50003880-50003899 Msa0026240:intron 25.0%
! ACAAGTTAAGGAACTAAAAA+AGG + chr1_1:50003988-50004007 None:intergenic 25.0%
! TTAAGTCAAATTATTCCAGT+GGG + chr1_1:50004206-50004225 None:intergenic 25.0%
! ATTAAGTCAAATTATTCCAG+TGG + chr1_1:50004207-50004226 None:intergenic 25.0%
!!! CTGTGGTCTTATTTATAATT+TGG - chr1_1:50004304-50004323 Msa0026240:CDS 25.0%
! AGAAATTATAAAACCGGTAA+TGG + chr1_1:50004361-50004380 None:intergenic 25.0%
! ATAGGCAGAAATTATAAAAC+CGG + chr1_1:50004367-50004386 None:intergenic 25.0%
! TTTAATATACTGTCAGAACT+AGG - chr1_1:50004539-50004558 Msa0026240:CDS 25.0%
! ATAGATAAGAAATTCATGAG+CGG + chr1_1:50004612-50004631 None:intergenic 25.0%
! AATTTCTTATCTATCTTCGT+TGG - chr1_1:50004618-50004637 Msa0026240:CDS 25.0%
! ATTTCTTATCTATCTTCGTT+GGG - chr1_1:50004619-50004638 Msa0026240:CDS 25.0%
! AAAATCTGAAGATGTTCAAT+GGG + chr1_1:50004689-50004708 None:intergenic 25.0%
! CATCTTTGACTTTAACAGTA+TGG + chr1_1:49996157-49996176 None:intergenic 30.0%
CATACTGTTAAAGTCAAAGA+TGG - chr1_1:49996155-49996174 Msa0026240:intron 30.0%
!! TGGAACCTTTTTGTTTGATT+TGG - chr1_1:49996175-49996194 Msa0026240:intron 30.0%
!!! ATTTGGTTATTTTGAGACTC+AGG - chr1_1:49996192-49996211 Msa0026240:intron 30.0%
!!! TGTAGTTTTTTGCAAAGTCA+CGG + chr1_1:49996294-49996313 None:intergenic 30.0%
ACACAACGAAAATCACATTA+CGG + chr1_1:49996401-49996420 None:intergenic 30.0%
! TAATGTGATTTTCGTTGTGT+TGG - chr1_1:49996401-49996420 Msa0026240:CDS 30.0%
! AATGTGATTTTCGTTGTGTT+GGG - chr1_1:49996402-49996421 Msa0026240:CDS 30.0%
!!! AACAATATCAGTTTTTGGCT+TGG - chr1_1:49996689-49996708 Msa0026240:intron 30.0%
ATCATGTGATTCAGATGAAA+TGG - chr1_1:49997050-49997069 Msa0026240:intron 30.0%
ACTATTATATCAAGCTTGAG+TGG - chr1_1:49997141-49997160 Msa0026240:intron 30.0%
ATGCAATCTTCTTCTATATG+AGG - chr1_1:49997888-49997907 Msa0026240:intron 30.0%
ATCTTCTTCTATATGAGGAT+CGG - chr1_1:49997893-49997912 Msa0026240:intron 30.0%
AATATCTACAGTCCAATCAT+CGG + chr1_1:49997925-49997944 None:intergenic 30.0%
! TTACACTTACGTATTTGTTG+TGG - chr1_1:49997943-49997962 Msa0026240:intron 30.0%
!! TACACTTACGTATTTGTTGT+GGG - chr1_1:49997944-49997963 Msa0026240:intron 30.0%
ACACATCTCTTAAGTGTAAA+TGG - chr1_1:49998125-49998144 Msa0026240:intron 30.0%
TTACTTGTCAAACTTTCATC+GGG - chr1_1:49998323-49998342 Msa0026240:intron 30.0%
!!! TTTCTGTTTTTGTCTTGTAC+TGG - chr1_1:49998491-49998510 Msa0026240:intron 30.0%
ATATAATCCAACTCGTAAAC+AGG + chr1_1:49998544-49998563 None:intergenic 30.0%
GTTGTAACTAGTTCAGTAAT+TGG - chr1_1:49998582-49998601 Msa0026240:intron 30.0%
TCTACACATTAACAGTAACT+TGG - chr1_1:49998698-49998717 Msa0026240:CDS 30.0%
!! ATTCATTTTGAGTCTGTTGT+AGG - chr1_1:49998764-49998783 Msa0026240:intron 30.0%
AATTTAGGTCTGATTGTCAT+TGG - chr1_1:49998907-49998926 Msa0026240:CDS 30.0%
CAGTGAAAAATGTATCTAGA+AGG - chr1_1:49998969-49998988 Msa0026240:CDS 30.0%
! TTCTTGTTTAATACAAGTGG+TGG - chr1_1:49999018-49999037 Msa0026240:CDS 30.0%
GACACTCAAAAAGAATTGAA+TGG + chr1_1:49999071-49999090 None:intergenic 30.0%
! TTATTGTTTGTTGACCTTCT+AGG - chr1_1:49999184-49999203 Msa0026240:intron 30.0%
TCCAATGCTAGTTGATTATT+CGG + chr1_1:49999263-49999282 None:intergenic 30.0%
TTTGTTTGTTTGACCAAATC+TGG - chr1_1:49999497-49999516 Msa0026240:CDS 30.0%
TTAAGAACGCCAATATTTCA+AGG - chr1_1:49999537-49999556 Msa0026240:CDS 30.0%
!!! TGGTTAATGTGACAGTTTTT+TGG - chr1_1:49999628-49999647 Msa0026240:CDS 30.0%
ACCAGAAAGATCATCAAAAT+TGG - chr1_1:49999793-49999812 Msa0026240:CDS 30.0%
!! ACCAATTTTGATGATCTTTC+TGG + chr1_1:49999797-49999816 None:intergenic 30.0%
! TTTGTCAAGTTTGCACTTTT+TGG + chr1_1:49999936-49999955 None:intergenic 30.0%
!!! TTGTTTTAATATGCTCTGCA+AGG + chr1_1:49999973-49999992 None:intergenic 30.0%
TAAAACAAAATACTTGGCAC+CGG - chr1_1:49999985-50000004 Msa0026240:CDS 30.0%
CAAATTATGGACAAGCTTAT+TGG - chr1_1:50000142-50000161 Msa0026240:CDS 30.0%
TTTATCACTTGGCCAATATA+TGG - chr1_1:50000228-50000247 Msa0026240:CDS 30.0%
TTATCACTTGGCCAATATAT+GGG - chr1_1:50000229-50000248 Msa0026240:CDS 30.0%
TGTGATAGAAAAACGATTTG+AGG - chr1_1:50000291-50000310 Msa0026240:CDS 30.0%
TTGAGTGCAAAGAAGAAAAA+GGG + chr1_1:50000579-50000598 None:intergenic 30.0%
ATTGAGTGCAAAGAAGAAAA+AGG + chr1_1:50000580-50000599 None:intergenic 30.0%
TTCAATTGCCATCAAATACA+AGG - chr1_1:50000695-50000714 Msa0026240:intron 30.0%
!! TCAGGTTTTAATCTTGTTAC+TGG - chr1_1:50001028-50001047 Msa0026240:CDS 30.0%
! TCCTAAATTGACTCTATATC+AGG - chr1_1:50001280-50001299 Msa0026240:CDS 30.0%
!! TAGTGAACTTGTTTCTGATT+TGG - chr1_1:50001505-50001524 Msa0026240:CDS 30.0%
! TCTGTTTCTTCTTAAAAGCT+TGG - chr1_1:50001553-50001572 Msa0026240:CDS 30.0%
TTTCTTCTTAAAAGCTTGGA+AGG - chr1_1:50001557-50001576 Msa0026240:CDS 30.0%
!! TGAAGGTAAAGTTGATAATC+TGG - chr1_1:50001634-50001653 Msa0026240:CDS 30.0%
!!! CAGAAGGAACTGTTATTTTT+AGG + chr1_1:50001664-50001683 None:intergenic 30.0%
AATAACTGATTACACCAGAA+AGG + chr1_1:50001776-50001795 None:intergenic 30.0%
! TTTCTGGTGTAATCAGTTAT+TGG - chr1_1:50001775-50001794 Msa0026240:CDS 30.0%
!! TATAGAAGGCTTTAGAAAAG+TGG + chr1_1:50002333-50002352 None:intergenic 30.0%
GCCTTCTATAAACTTATTCT+TGG - chr1_1:50002343-50002362 Msa0026240:intron 30.0%
!! CTTGGAAAGGTAATTGATTT+TGG - chr1_1:50002361-50002380 Msa0026240:intron 30.0%
!! CAGGAAATTTTGTTTGGAAT+CGG - chr1_1:50002553-50002572 Msa0026240:intron 30.0%
AATATTTCATCCTGTTTGGT+AGG - chr1_1:50002777-50002796 Msa0026240:intron 30.0%
! CACTTTGTCTTGATAATAGT+TGG - chr1_1:50002910-50002929 Msa0026240:intron 30.0%
TAACACAACCAAAAAGGTTA+TGG + chr1_1:50002946-50002965 None:intergenic 30.0%
AATAAAAAAGCCCCAAAAGT+TGG - chr1_1:50003011-50003030 Msa0026240:intron 30.0%
ATAAAAAAGCCCCAAAAGTT+GGG - chr1_1:50003012-50003031 Msa0026240:intron 30.0%
! TTATGTAAACCCCAACTTTT+GGG + chr1_1:50003025-50003044 None:intergenic 30.0%
! ATTATGTAAACCCCAACTTT+TGG + chr1_1:50003026-50003045 None:intergenic 30.0%
!!! AGCTTTTTCAATCAATTGCA+TGG - chr1_1:50003101-50003120 Msa0026240:CDS 30.0%
TTAAGGGATTGTTTCATTCA+AGG - chr1_1:50003195-50003214 Msa0026240:CDS 30.0%
TGGAAGAAATAGAAGACATT+GGG - chr1_1:50003526-50003545 Msa0026240:intron 30.0%
GGGGAACTAAAAAATTGTAT+TGG - chr1_1:50003594-50003613 Msa0026240:intron 30.0%
!!! AAATTGTATTGGGGGTTTTT+TGG - chr1_1:50003605-50003624 Msa0026240:intron 30.0%
!!! GAGATTTTAAGGCTTTGTTT+GGG + chr1_1:50003755-50003774 None:intergenic 30.0%
!!! TGAGATTTTAAGGCTTTGTT+TGG + chr1_1:50003756-50003775 None:intergenic 30.0%
! TATTTTCTTTCTTTCCGATC+CGG + chr1_1:50003792-50003811 None:intergenic 30.0%
AAAAGAAACAAATGTTAGGC+TGG + chr1_1:50004128-50004147 None:intergenic 30.0%
! AATCAGCTGTTATGGTTTTT+AGG - chr1_1:50004334-50004353 Msa0026240:CDS 30.0%
GAAAATCTGAAGATGTTCAA+TGG + chr1_1:50004690-50004709 None:intergenic 30.0%
! TATGTCCTTTTCTATTAGAG+CGG - chr1_1:50004793-50004812 Msa0026240:intron 30.0%
TGTATCCTTACATTGACAAT+GGG + chr1_1:50004930-50004949 None:intergenic 30.0%
ATGTATCCTTACATTGACAA+TGG + chr1_1:50004931-50004950 None:intergenic 30.0%
AGTAAAATCTGTACACCTTT+CGG + chr1_1:50005158-50005177 None:intergenic 30.0%
CATGTTACGTGTAAAAAACA+TGG + chr1_1:50005199-50005218 None:intergenic 30.0%
CTGACACTTAATTGAATTTC+AGG - chr1_1:50005426-50005445 Msa0026240:intron 30.0%
! TCAGCTTATTTGGATTTTGA+AGG - chr1_1:50005533-50005552 Msa0026240:intron 30.0%
! ATTGGTAGCAATGTAGATAA+AGG - chr1_1:50005572-50005591 Msa0026240:intron 30.0%
AGAAAACTTGTAAGGGAAGA+GGG + chr1_1:49995705-49995724 None:intergenic 35.0%
AAGAAAACTTGTAAGGGAAG+AGG + chr1_1:49995706-49995725 None:intergenic 35.0%
AGACGGAAGAAAACTTGTAA+GGG + chr1_1:49995712-49995731 None:intergenic 35.0%
AAGACGGAAGAAAACTTGTA+AGG + chr1_1:49995713-49995732 None:intergenic 35.0%
ATTGATGAAAACCAGAGAAG+AGG + chr1_1:49995743-49995762 None:intergenic 35.0%
CCAAAGAGTAAGTGTATGTT+TGG + chr1_1:49996377-49996396 None:intergenic 35.0%
CCAAACATACACTTACTCTT+TGG - chr1_1:49996374-49996393 Msa0026240:intron 35.0%
! TTTTCGTTGTGTTGGGTTAA+AGG - chr1_1:49996409-49996428 Msa0026240:CDS 35.0%
AGAATGCATCATCATGAAAG+TGG - chr1_1:49996469-49996488 Msa0026240:CDS 35.0%
!!! TTGCAGCACTGTTACTTTTT+TGG - chr1_1:49996493-49996512 Msa0026240:CDS 35.0%
!!! TGCAGCACTGTTACTTTTTT+GGG - chr1_1:49996494-49996513 Msa0026240:CDS 35.0%
! GAAAAGTTTGGTTGTTGTTC+TGG - chr1_1:49996617-49996636 Msa0026240:intron 35.0%
GCTTGGAATTCTGACTTATT+TGG - chr1_1:49996706-49996725 Msa0026240:intron 35.0%
AAGCAATTAATGGGAAGTAG+AGG - chr1_1:49996820-49996839 Msa0026240:CDS 35.0%
CGATTGTGTTGAACTTACAT+CGG + chr1_1:49996944-49996963 None:intergenic 35.0%
CGATGTAAGTTCAACACAAT+CGG - chr1_1:49996942-49996961 Msa0026240:intron 35.0%
!!! AGTTCTGTCATTTTGTACAG+AGG - chr1_1:49997212-49997231 Msa0026240:intron 35.0%
!!! GTTCTGTCATTTTGTACAGA+GGG - chr1_1:49997213-49997232 Msa0026240:intron 35.0%
TTTGCAAGCTTTACAAGTAG+TGG + chr1_1:49997273-49997292 None:intergenic 35.0%
!! CTGTTTCTGCTTTATGTCAA+AGG - chr1_1:49997394-49997413 Msa0026240:intron 35.0%
TTTCTTCTCAACAAGCATAC+AGG - chr1_1:49997637-49997656 Msa0026240:intron 35.0%
CAGGTAAGCATCTAATACAA+AGG - chr1_1:49997656-49997675 Msa0026240:intron 35.0%
TTCTCATTCCTCAGAAATGT+CGG - chr1_1:49998067-49998086 Msa0026240:intron 35.0%
! TAAGCATGGATTGATTCAAC+AGG - chr1_1:49998100-49998119 Msa0026240:intron 35.0%
TAACTCATACAAAGTCCTGA+AGG + chr1_1:49998360-49998379 None:intergenic 35.0%
TAAGTTTCCTGTTTACGAGT+TGG - chr1_1:49998534-49998553 Msa0026240:intron 35.0%
!! ATACTTTTAGGGGCTACATA+GGG + chr1_1:49998672-49998691 None:intergenic 35.0%
TCTCGTCATGATAGAGTATA+GGG - chr1_1:49998732-49998751 Msa0026240:CDS 35.0%
TTTCTTACTGCAATGTGACT+AGG + chr1_1:49998868-49998887 None:intergenic 35.0%
AGTGTCTTTATCTAGAAACC+AGG - chr1_1:49999085-49999104 Msa0026240:intron 35.0%
ATTACAAGAAAAACCTTGCC+TGG + chr1_1:49999106-49999125 None:intergenic 35.0%
CTTGTATTGAGCAGTGTAAA+AGG - chr1_1:49999156-49999175 Msa0026240:intron 35.0%
GAGTACTTCATATACCTAGA+AGG + chr1_1:49999201-49999220 None:intergenic 35.0%
! GATTATTCGGATCTTTTTCC+AGG + chr1_1:49999250-49999269 None:intergenic 35.0%
TCCGAATAATCAACTAGCAT+TGG - chr1_1:49999259-49999278 Msa0026240:CDS 35.0%
TAACTAACCTGGATCAACAT+GGG + chr1_1:49999347-49999366 None:intergenic 35.0%
TTAACTAACCTGGATCAACA+TGG + chr1_1:49999348-49999367 None:intergenic 35.0%
TTTGCACAGGTGTTTAATTC+TGG - chr1_1:49999428-49999447 Msa0026240:CDS 35.0%
GCCAATATTTCAAGGTGAAA+CGG - chr1_1:49999545-49999564 Msa0026240:CDS 35.0%
CCAATATTTCAAGGTGAAAC+GGG - chr1_1:49999546-49999565 Msa0026240:CDS 35.0%
!!! TAATGTGACAGTTTTTTGGC+TGG - chr1_1:49999632-49999651 Msa0026240:CDS 35.0%
GATTATCTCAGCTATCTGTA+AGG + chr1_1:49999696-49999715 None:intergenic 35.0%
! CAGTTGAAAAAGTGTAACAC+AGG + chr1_1:49999889-49999908 None:intergenic 35.0%
! TTCTGATGATGTAGGAGATT+GGG + chr1_1:49999912-49999931 None:intergenic 35.0%
!!! TTTTTGGCTTCTGATGATGT+AGG + chr1_1:49999920-49999939 None:intergenic 35.0%
TGCATGAAGAGAAGATCAAT+AGG - chr1_1:50000110-50000129 Msa0026240:CDS 35.0%
GCATGAAGAGAAGATCAATA+GGG - chr1_1:50000111-50000130 Msa0026240:CDS 35.0%
!! TAGGGTACTGGATCAAATTA+TGG - chr1_1:50000129-50000148 Msa0026240:CDS 35.0%
TATCACTTGGCCAATATATG+GGG - chr1_1:50000230-50000249 Msa0026240:CDS 35.0%
CAATATATGGGGGAAAACAA+GGG - chr1_1:50000241-50000260 Msa0026240:CDS 35.0%
AATATATGGGGGAAAACAAG+GGG - chr1_1:50000242-50000261 Msa0026240:CDS 35.0%
CACCCCTTTCTATATTAATC+AGG - chr1_1:50000362-50000381 Msa0026240:CDS 35.0%
TGTACGTTGCTCAGAATAAT+AGG + chr1_1:50000424-50000443 None:intergenic 35.0%
CCTTAACAAAACGTACTTTC+AGG + chr1_1:50000504-50000523 None:intergenic 35.0%
!! CCTGAAAGTACGTTTTGTTA+AGG - chr1_1:50000501-50000520 Msa0026240:intron 35.0%
!! GAAAGTACGTTTTGTTAAGG+AGG - chr1_1:50000504-50000523 Msa0026240:intron 35.0%
TGAAAGATATCTATGGCCAA+AGG - chr1_1:50000600-50000619 Msa0026240:intron 35.0%
GAGGATGAGAAATTATCATC+TGG - chr1_1:50000640-50000659 Msa0026240:intron 35.0%
! GTATTTGATGGCAATTGAAG+CGG + chr1_1:50000694-50000713 None:intergenic 35.0%
ATATTTGTAACCACAGTCAG+TGG - chr1_1:50000790-50000809 Msa0026240:CDS 35.0%
TATCTTGTTCTTAGGGAATG+AGG - chr1_1:50000858-50000877 Msa0026240:CDS 35.0%
ATCTTGTTCTTAGGGAATGA+GGG - chr1_1:50000859-50000878 Msa0026240:CDS 35.0%
! ATTCACATTGACTGCTTGAT+CGG + chr1_1:50000982-50001001 None:intergenic 35.0%
ATCATCTTCTTCAGGAATTC+AGG - chr1_1:50001010-50001029 Msa0026240:CDS 35.0%
GCCTGATATAGAGTCAATTT+AGG + chr1_1:50001284-50001303 None:intergenic 35.0%
ACTCTATATCAGGCAATTCT+TGG - chr1_1:50001290-50001309 Msa0026240:CDS 35.0%
AACTCATTTAGTTGGACAGA+AGG + chr1_1:50001680-50001699 None:intergenic 35.0%
ATCTTGCTTCAAAGCTGAAT+AGG + chr1_1:50001814-50001833 None:intergenic 35.0%
AAGATGCAAGTACTTCAAAC+TGG - chr1_1:50001829-50001848 Msa0026240:CDS 35.0%
ACTGTTTCAGAGTTATTGTG+AGG + chr1_1:50001881-50001900 None:intergenic 35.0%
TAGTTTCATCATTTGTGCAG+CGG + chr1_1:50001978-50001997 None:intergenic 35.0%
TTCAAGAACCACTTTATGAC+TGG + chr1_1:50002005-50002024 None:intergenic 35.0%
TCATAAAGTGGTTCTTGAAG+TGG - chr1_1:50002006-50002025 Msa0026240:CDS 35.0%
AGTGGAATATGATGAAGAAG+TGG - chr1_1:50002024-50002043 Msa0026240:CDS 35.0%
GTGGAATATGATGAAGAAGT+GGG - chr1_1:50002025-50002044 Msa0026240:CDS 35.0%
!! ATTTTATACCTTGGTGTGTC+AGG - chr1_1:50002072-50002091 Msa0026240:CDS 35.0%
TACCATAAAGACAAACTTGC+AGG - chr1_1:50002144-50002163 Msa0026240:intron 35.0%
ACAGGAATCCATTCTCTTTA+TGG - chr1_1:50002175-50002194 Msa0026240:intron 35.0%
GAAAGAGTCCATAAAGAGAA+TGG + chr1_1:50002186-50002205 None:intergenic 35.0%
TTGTCAACACAAGATACATC+TGG - chr1_1:50002217-50002236 Msa0026240:CDS 35.0%
TAGCAACAACTTGACCTAAA+AGG + chr1_1:50002279-50002298 None:intergenic 35.0%
AGTTTCAAGCACTAGTTAAC+AGG - chr1_1:50002534-50002553 Msa0026240:intron 35.0%
! CTTTAGAGATTCCAGAATTG+AGG - chr1_1:50002613-50002632 Msa0026240:intron 35.0%
AAGACAAAGATCCTCAATTC+TGG + chr1_1:50002627-50002646 None:intergenic 35.0%
! TGTCTTGATTTTACTCTTCC+TGG - chr1_1:50002641-50002660 Msa0026240:intron 35.0%
! GTCTTGATTTTACTCTTCCT+GGG - chr1_1:50002642-50002661 Msa0026240:intron 35.0%
!! TGTTCTAACCCTTTTGTTGT+TGG - chr1_1:50002743-50002762 Msa0026240:intron 35.0%
CTCATATTTACCTACCAAAC+AGG + chr1_1:50002790-50002809 None:intergenic 35.0%
GTAGGTAAATATGAGAAACC+TGG - chr1_1:50002795-50002814 Msa0026240:intron 35.0%
TAAGTGAAACATAATCCTCC+AGG + chr1_1:50002816-50002835 None:intergenic 35.0%
TAAAAAAGCCCCAAAAGTTG+GGG - chr1_1:50003013-50003032 Msa0026240:intron 35.0%
! TATGTAAACCCCAACTTTTG+GGG + chr1_1:50003024-50003043 None:intergenic 35.0%
AATCAATTGCATGGTCTGAA+GGG - chr1_1:50003110-50003129 Msa0026240:CDS 35.0%
AGAACAAAGGAAAACAAGGT+TGG + chr1_1:50003280-50003299 None:intergenic 35.0%
ACAGAGAACAAAGGAAAACA+AGG + chr1_1:50003284-50003303 None:intergenic 35.0%
ATTGCATACACAGAGAACAA+AGG + chr1_1:50003293-50003312 None:intergenic 35.0%
! AACCGAACAGTTACTTTGTT+TGG - chr1_1:50003453-50003472 Msa0026240:CDS 35.0%
! ACCGAACAGTTACTTTGTTT+GGG - chr1_1:50003454-50003473 Msa0026240:CDS 35.0%
TCCCAAACAAAGTAACTGTT+CGG + chr1_1:50003458-50003477 None:intergenic 35.0%
! AGTTACTTTGTTTGGGAGTT+TGG - chr1_1:50003461-50003480 Msa0026240:CDS 35.0%
GTGGAAGAAATAGAAGACAT+TGG - chr1_1:50003525-50003544 Msa0026240:intron 35.0%
AAGAAATAGAAGACATTGGG+AGG - chr1_1:50003529-50003548 Msa0026240:intron 35.0%
AATACAAAATCCCCCTTGTT+TGG - chr1_1:50003572-50003591 Msa0026240:intron 35.0%
! ATACAAAATCCCCCTTGTTT+GGG - chr1_1:50003573-50003592 Msa0026240:intron 35.0%
!!! TTTTTAGTTCCCCCAAACAA+GGG + chr1_1:50003587-50003606 None:intergenic 35.0%
!!! TTTTTTAGTTCCCCCAAACA+AGG + chr1_1:50003588-50003607 None:intergenic 35.0%
CATACTAACTTATGCCCTAA+GGG + chr1_1:50004012-50004031 None:intergenic 35.0%
TCATACTAACTTATGCCCTA+AGG + chr1_1:50004013-50004032 None:intergenic 35.0%
!! AGTAAGGCTTTATTACTGCA+CGG + chr1_1:50004064-50004083 None:intergenic 35.0%
TAAATACCAGTGTACCAGTA+AGG + chr1_1:50004080-50004099 None:intergenic 35.0%
TAAGATGTAACTAGGACTTG+TGG + chr1_1:50004244-50004263 None:intergenic 35.0%
! GATAACGGTAAGATGTAACT+AGG + chr1_1:50004252-50004271 None:intergenic 35.0%
!! TGTTTGGGTTTTTCATTCTG+TGG - chr1_1:50004287-50004306 Msa0026240:CDS 35.0%
!!! ATGGTTTTTAGGACCATTAC+CGG - chr1_1:50004345-50004364 Msa0026240:CDS 35.0%
TAATTTCTGCCTATGTTCCT+AGG - chr1_1:50004373-50004392 Msa0026240:CDS 35.0%
AATTTCTGCCTATGTTCCTA+GGG - chr1_1:50004374-50004393 Msa0026240:CDS 35.0%
! ATGTCCTTTTCTATTAGAGC+GGG - chr1_1:50004794-50004813 Msa0026240:intron 35.0%
TTTCGGACAATAGTCAACTT+CGG + chr1_1:50005141-50005160 None:intergenic 35.0%
CAAGAGAATGAAGTCATGAT+AGG + chr1_1:50005507-50005526 None:intergenic 35.0%
GGTGTAATTATTAGGGTGAT+TGG - chr1_1:50005554-50005573 Msa0026240:intron 35.0%
! TCTTCACTGACTACAATTGT+TGG - chr1_1:50005659-50005678 Msa0026240:five_prime_UTR 35.0%
! CTTCACTGACTACAATTGTT+GGG - chr1_1:50005660-50005679 Msa0026240:five_prime_UTR 35.0%
! TTCACTGACTACAATTGTTG+GGG - chr1_1:50005661-50005680 Msa0026240:five_prime_UTR 35.0%
AAAAACAGCTAACTATCAGC+AGG + chr1_1:50005698-50005717 None:intergenic 35.0%
!!! GCTGATAGTTAGCTGTTTTT+TGG - chr1_1:50005698-50005717 Msa0026240:intron 35.0%
TTCTGTCCTCTGTATAGAAA+CGG - chr1_1:50005722-50005741 Msa0026240:intron 35.0%
GAGAAGAGGATGATTGAAGA+CGG + chr1_1:49995729-49995748 None:intergenic 40.0%
TCTTCAATCATCCTCTTCTC+TGG - chr1_1:49995729-49995748 Msa0026240:three_prime_UTR 40.0%
CTCTGAGTTTGACAGAATCA+CGG - chr1_1:49996261-49996280 Msa0026240:CDS 40.0%
!!! AGTTTTTTGCAAAGTCACGG+TGG + chr1_1:49996291-49996310 None:intergenic 40.0%
! GTTTGGTTGTTGTTCTGGAT+TGG - chr1_1:49996622-49996641 Msa0026240:intron 40.0%
! ACGAGATTTTGAACTACGCA+GGG - chr1_1:49996774-49996793 Msa0026240:intron 40.0%
! ATTTTGAACTACGCAGGGTT+CGG - chr1_1:49996779-49996798 Msa0026240:intron 40.0%
AATTGCTTCTACTCCCCAAT+TGG + chr1_1:49996808-49996827 None:intergenic 40.0%
TGGGGAGTAGAAGCAATTAA+TGG - chr1_1:49996810-49996829 Msa0026240:CDS 40.0%
GGGGAGTAGAAGCAATTAAT+GGG - chr1_1:49996811-49996830 Msa0026240:CDS 40.0%
!! ACTTACATCGGTTTGAACTG+AGG + chr1_1:49996932-49996951 None:intergenic 40.0%
AAGTTCAACACAATCGGCAA+TGG - chr1_1:49996948-49996967 Msa0026240:intron 40.0%
! GAAGTATCCATGTCATCATG+GGG + chr1_1:49996976-49996995 None:intergenic 40.0%
!! GGAAGTATCCATGTCATCAT+GGG + chr1_1:49996977-49996996 None:intergenic 40.0%
!! AGGAAGTATCCATGTCATCA+TGG + chr1_1:49996978-49996997 None:intergenic 40.0%
GTCTCTGTCTATGATATTCG+TGG + chr1_1:49997095-49997114 None:intergenic 40.0%
! TAACAAGTCTGAAGTCATGC+TGG + chr1_1:49997247-49997266 None:intergenic 40.0%
!! ACAAGGAAGTACCAATTACC+TGG + chr1_1:49997452-49997471 None:intergenic 40.0%
TATCCAGTGTCTTCAAGCAT+TGG - chr1_1:49997541-49997560 Msa0026240:intron 40.0%
AAGTTCATCCGACATTTCTG+AGG + chr1_1:49998078-49998097 None:intergenic 40.0%
TCGGATGAACTTTGTAAGCA+TGG - chr1_1:49998086-49998105 Msa0026240:intron 40.0%
TTAATTGGGATAGAGTCGCT+CGG + chr1_1:49998151-49998170 None:intergenic 40.0%
TTTGCTTGACAGGGTTTGAT+AGG - chr1_1:49998299-49998318 Msa0026240:intron 40.0%
! TTGTTGGTGGACACTGTAAT+CGG - chr1_1:49998450-49998469 Msa0026240:intron 40.0%
!! GATACTTTTAGGGGCTACAT+AGG + chr1_1:49998673-49998692 None:intergenic 40.0%
CTCTCGTCATGATAGAGTAT+AGG - chr1_1:49998731-49998750 Msa0026240:CDS 40.0%
GTCATGATAGAGTATAGGGA+GGG - chr1_1:49998736-49998755 Msa0026240:CDS 40.0%
TCATGATAGAGTATAGGGAG+GGG - chr1_1:49998737-49998756 Msa0026240:CDS 40.0%
! GTTGATTCACAACTCGAACA+TGG - chr1_1:49998838-49998857 Msa0026240:intron 40.0%
GTATCTAGAAGGCTGCAATA+AGG - chr1_1:49998980-49998999 Msa0026240:CDS 40.0%
CTTTATCTAGAAACCAGGCA+AGG - chr1_1:49999090-49999109 Msa0026240:intron 40.0%
! ATCTGGATGATTAGCTAGGA+AGG + chr1_1:49999294-49999313 None:intergenic 40.0%
TACCTATCTCATCTTTGCAC+AGG - chr1_1:49999415-49999434 Msa0026240:CDS 40.0%
GAATAGACATCCATGGCAAA+CGG + chr1_1:49999465-49999484 None:intergenic 40.0%
ACATGACGAATAGACATCCA+TGG + chr1_1:49999472-49999491 None:intergenic 40.0%
CCCGTTTCACCTTGAAATAT+TGG + chr1_1:49999549-49999568 None:intergenic 40.0%
!! TTTTGGCTGGAGTTTTCACT+CGG - chr1_1:49999645-49999664 Msa0026240:CDS 40.0%
TCAAAATTGGTGTACCCTAG+TGG - chr1_1:49999806-49999825 Msa0026240:CDS 40.0%
AAAGTGTAACACAGGCACTT+GGG + chr1_1:49999881-49999900 None:intergenic 40.0%
! AAAAGTGTAACACAGGCACT+TGG + chr1_1:49999882-49999901 None:intergenic 40.0%
! CTTCTGATGATGTAGGAGAT+TGG + chr1_1:49999913-49999932 None:intergenic 40.0%
AGAGAAGATCAATAGGGTAC+TGG - chr1_1:50000117-50000136 Msa0026240:CDS 40.0%
TATGGACAAGCTTATTGGCA+AGG - chr1_1:50000147-50000166 Msa0026240:CDS 40.0%
ATCACTTGGCCAATATATGG+GGG - chr1_1:50000231-50000250 Msa0026240:CDS 40.0%
!!! CCTTGTTTTCCCCCATATAT+TGG + chr1_1:50000243-50000262 None:intergenic 40.0%
CCAATATATGGGGGAAAACA+AGG - chr1_1:50000240-50000259 Msa0026240:CDS 40.0%
CAAAACGTACTTTCAGGCAA+GGG + chr1_1:50000498-50000517 None:intergenic 40.0%
ACAAAACGTACTTTCAGGCA+AGG + chr1_1:50000499-50000518 None:intergenic 40.0%
ACACAGGACCTTGTATTTGA+TGG + chr1_1:50000706-50000725 None:intergenic 40.0%
GACAGATCTATGTGAAACAC+AGG - chr1_1:50000765-50000784 Msa0026240:intron 40.0%
CTAGGGGGAAATGCATAAAT+AGG + chr1_1:50000832-50000851 None:intergenic 40.0%
TCTTGTTCTTAGGGAATGAG+GGG - chr1_1:50000860-50000879 Msa0026240:CDS 40.0%
!! TTCAACTATACTGGTTCTGC+AGG - chr1_1:50000926-50000945 Msa0026240:CDS 40.0%
!! TCAACTATACTGGTTCTGCA+GGG - chr1_1:50000927-50000946 Msa0026240:CDS 40.0%
! TTCACATTGACTGCTTGATC+GGG + chr1_1:50000981-50001000 None:intergenic 40.0%
AAGCAGTCAATGTGAATGCT+GGG - chr1_1:50000985-50001004 Msa0026240:CDS 40.0%
GCAGAATCAGACTCAAAACT+AGG - chr1_1:50001182-50001201 Msa0026240:CDS 40.0%
! AGAGTCAATTTAGGATCCAG+AGG + chr1_1:50001275-50001294 None:intergenic 40.0%
! GTGGTGTTAGTGCAAAATTG+TGG - chr1_1:50001336-50001355 Msa0026240:CDS 40.0%
GATGAAGAATGACAATCCGA+AGG + chr1_1:50001416-50001435 None:intergenic 40.0%
! AGAATGTGTGCTTTTGCTGA+AGG - chr1_1:50001617-50001636 Msa0026240:CDS 40.0%
TGCTCACGAACTCATTTAGT+TGG + chr1_1:50001688-50001707 None:intergenic 40.0%
GCTTCAAAGCTGAATAGGAA+AGG + chr1_1:50001809-50001828 None:intergenic 40.0%
TACTTCAAACTGGCAGCATT+TGG - chr1_1:50001839-50001858 Msa0026240:CDS 40.0%
GTTTCAGAGTTATTGTGAGG+TGG + chr1_1:50001878-50001897 None:intergenic 40.0%
!! ACTCTGAAACAGTAAGTGAC+AGG - chr1_1:50001888-50001907 Msa0026240:CDS 40.0%
!!! AGTTTTTAGTTTACCGCGAC+CGG - chr1_1:50001942-50001961 Msa0026240:intron 40.0%
ACTACATGCCAGTCATAAAG+TGG - chr1_1:50001994-50002013 Msa0026240:intron 40.0%
AGCCTGCAAGTTTGTCTTTA+TGG + chr1_1:50002149-50002168 None:intergenic 40.0%
! GTATCTTGTGTTGACAACCA+TGG + chr1_1:50002214-50002233 None:intergenic 40.0%
TCAACACAAGATACATCTGG+TGG - chr1_1:50002220-50002239 Msa0026240:CDS 40.0%
! GTTGCTAAAGCACTTCAAGA+CGG - chr1_1:50002292-50002311 Msa0026240:CDS 40.0%
! TAAAGCACTTCAAGACGGAA+GGG - chr1_1:50002297-50002316 Msa0026240:CDS 40.0%
GCTTGCAACTTGTAGTAAGA+TGG - chr1_1:50002409-50002428 Msa0026240:intron 40.0%
CTGTGAAGGAAATTCTGAGT+TGG - chr1_1:50002577-50002596 Msa0026240:intron 40.0%
! AGGAAATTCTGAGTTGGAAC+AGG - chr1_1:50002583-50002602 Msa0026240:intron 40.0%
! GGAAATTCTGAGTTGGAACA+GGG - chr1_1:50002584-50002603 Msa0026240:intron 40.0%
CTGATACTGTTCTTGCTTCA+GGG - chr1_1:50002669-50002688 Msa0026240:intron 40.0%
GGTAAATATGAGAAACCTGG+AGG - chr1_1:50002798-50002817 Msa0026240:intron 40.0%
! CAAGTCTGGAATTTCAAGAC+AGG - chr1_1:50002852-50002871 Msa0026240:intron 40.0%
CAATCAATTGCATGGTCTGA+AGG - chr1_1:50003109-50003128 Msa0026240:CDS 40.0%
AAACAAGGTTGGAAGTTGAG+CGG + chr1_1:50003269-50003288 None:intergenic 40.0%
! TACTTTGTTTGGGAGTTTGG+AGG - chr1_1:50003464-50003483 Msa0026240:CDS 40.0%
! ACTTTGTTTGGGAGTTTGGA+GGG - chr1_1:50003465-50003484 Msa0026240:CDS 40.0%
!!! GAGGGTTTTGGAAAAAAGGA+AGG - chr1_1:50003497-50003516 Msa0026240:CDS 40.0%
! TACAAAATCCCCCTTGTTTG+GGG - chr1_1:50003574-50003593 Msa0026240:intron 40.0%
!!! TTTTAGTTCCCCCAAACAAG+GGG + chr1_1:50003586-50003605 None:intergenic 40.0%
!!! TTGTATTGGGGGTTTTTTGG+AGG - chr1_1:50003608-50003627 Msa0026240:intron 40.0%
!!! TGTATTGGGGGTTTTTTGGA+GGG - chr1_1:50003609-50003628 Msa0026240:intron 40.0%
! CTTTGTTTGGGAGTTTGAAG+GGG + chr1_1:50003743-50003762 None:intergenic 40.0%
!! GCTTTGTTTGGGAGTTTGAA+GGG + chr1_1:50003744-50003763 None:intergenic 40.0%
ATCTCAACAAGTTTCAGAGC+CGG - chr1_1:50003770-50003789 Msa0026240:intron 40.0%
!! TTCCTTAACTTGTGCCCTTA+GGG - chr1_1:50003995-50004014 Msa0026240:CDS 40.0%
GTGCAGTAATAAAGCCTTAC+TGG - chr1_1:50004063-50004082 Msa0026240:intron 40.0%
ATAAAGCCTTACTGGTACAC+TGG - chr1_1:50004071-50004090 Msa0026240:intron 40.0%
GTGGGCGAAAATGACAAAAA+AGG + chr1_1:50004188-50004207 None:intergenic 40.0%
!!! TTTTTGTCATTTTCGCCCAC+TGG - chr1_1:50004188-50004207 Msa0026240:CDS 40.0%
TGTAATGACCCTAGGAACAT+AGG + chr1_1:50004385-50004404 None:intergenic 40.0%
ACTGGTACTTGGGGAAAAAT+GGG - chr1_1:50004500-50004519 Msa0026240:CDS 40.0%
GAACTTGAGCGTATACTTTG+CGG - chr1_1:50004719-50004738 Msa0026240:exon 40.0%
TCATCCCGCTCTAATAGAAA+AGG + chr1_1:50004801-50004820 None:intergenic 40.0%
AGCTCATTGATCTGCTAACA+AGG + chr1_1:50004861-50004880 None:intergenic 40.0%
GATCACATTAAGTTCGACCA+TGG - chr1_1:50004885-50004904 Msa0026240:intron 40.0%
ATCCTTACATTGACAATGGG+AGG + chr1_1:50004927-50004946 None:intergenic 40.0%
GTCATCAACAACTCAGTTGT+TGG - chr1_1:50005017-50005036 Msa0026240:intron 40.0%
ATTATCCGAGAGTTTGACCA+TGG - chr1_1:50005042-50005061 Msa0026240:intron 40.0%
GAAGTTGACTATTGTCCGAA+AGG - chr1_1:50005140-50005159 Msa0026240:intron 40.0%
TTTGCACAAGTCATCACACT+AGG + chr1_1:50005295-50005314 None:intergenic 40.0%
! TGCGGTACTTTTGACGAATA+CGG + chr1_1:50005334-50005353 None:intergenic 40.0%
CTCTTGTATGCCATAACAGA+GGG - chr1_1:50005466-50005485 Msa0026240:intron 40.0%
GAGAATGAAGTCATGATAGG+TGG + chr1_1:50005504-50005523 None:intergenic 40.0%
CATGACTTCATTCTCTTGAC+TGG - chr1_1:50005509-50005528 Msa0026240:intron 40.0%
CTTGACTGGATCAGCTTATT+TGG - chr1_1:50005523-50005542 Msa0026240:intron 40.0%
! TCACAGCAAGTTGCTTTCTT+GGG - chr1_1:50005622-50005641 Msa0026240:five_prime_UTR 40.0%
! TCACTGACTACAATTGTTGG+GGG - chr1_1:50005662-50005681 Msa0026240:five_prime_UTR 40.0%
GTAACAGCAGATGTACCAAA+GGG + chr1_1:50005844-50005863 None:intergenic 40.0%
AGTAACAGCAGATGTACCAA+AGG + chr1_1:50005845-50005864 None:intergenic 40.0%
AAACTTGTAAGGGAAGAGGG+TGG + chr1_1:49995702-49995721 None:intergenic 45.0%
TCGTTGTGTTGGGTTAAAGG+AGG - chr1_1:49996412-49996431 Msa0026240:CDS 45.0%
! GACGAGATTTTGAACTACGC+AGG - chr1_1:49996773-49996792 Msa0026240:intron 45.0%
!! AGGTCAAAAGCGTCCAGAAA+TGG - chr1_1:49996840-49996859 Msa0026240:CDS 45.0%
GGCAGTTCATCTACCATTTC+TGG + chr1_1:49996856-49996875 None:intergenic 45.0%
!! TACATCGGTTTGAACTGAGG+CGG + chr1_1:49996929-49996948 None:intergenic 45.0%
CAGAGACTATCGAGTGATCA+TGG - chr1_1:49997108-49997127 Msa0026240:intron 45.0%
AGTGGACAAACTGAACCTTC+TGG - chr1_1:49997159-49997178 Msa0026240:intron 45.0%
AACTGAACCTTCTGGTCAGT+TGG - chr1_1:49997167-49997186 Msa0026240:intron 45.0%
TTCGCAGAGTTCAGTGAGTA+CGG + chr1_1:49997193-49997212 None:intergenic 45.0%
ACAAGAAAACCAGCTGATCG+AGG + chr1_1:49997363-49997382 None:intergenic 45.0%
!! GGAAGTACCAATTACCTGGT+CGG + chr1_1:49997448-49997467 None:intergenic 45.0%
TCTCCAATGCTTGAAGACAC+TGG + chr1_1:49997547-49997566 None:intergenic 45.0%
ACAACCACTTGCTTGCTTAC+AGG - chr1_1:49997580-49997599 Msa0026240:intron 45.0%
TCTTCTATATGAGGATCGGC+AGG - chr1_1:49997897-49997916 Msa0026240:intron 45.0%
TCTGCATTTGACCTCTCACA+TGG - chr1_1:49998410-49998429 Msa0026240:intron 45.0%
ACGTTGATACACCATGTGAG+AGG + chr1_1:49998424-49998443 None:intergenic 45.0%
GTATCAACGTCTCAGCTTGT+TGG - chr1_1:49998434-49998453 Msa0026240:intron 45.0%
! TGTTGGTGGACACTGTAATC+GGG - chr1_1:49998451-49998470 Msa0026240:intron 45.0%
! TTGTACTGGTGTGCAGCTAT+AGG - chr1_1:49998505-49998524 Msa0026240:intron 45.0%
! TGTACTGGTGTGCAGCTATA+GGG - chr1_1:49998506-49998525 Msa0026240:intron 45.0%
CGTCATGATAGAGTATAGGG+AGG - chr1_1:49998735-49998754 Msa0026240:CDS 45.0%
TTGCTGAATGAACTTCTCCC+TGG - chr1_1:49999224-49999243 Msa0026240:CDS 45.0%
! GGAGATCTGGATGATTAGCT+AGG + chr1_1:49999298-49999317 None:intergenic 45.0%
TGTGTTTCCCATGTTGATCC+AGG - chr1_1:49999337-49999356 Msa0026240:CDS 45.0%
CACCTGTGCAAAGATGAGAT+AGG + chr1_1:49999420-49999439 None:intergenic 45.0%
GCAAGTTTATCCGTTTGCCA+TGG - chr1_1:49999452-49999471 Msa0026240:CDS 45.0%
! GAAACGGGCTTTCTTATCCT+TGG - chr1_1:49999561-49999580 Msa0026240:CDS 45.0%
!!! GGGTGTCTTTTTTGCCATTG+AGG - chr1_1:49999760-49999779 Msa0026240:CDS 45.0%
!! TGGTGTTAAGAGTGCCTCAA+TGG + chr1_1:49999777-49999796 None:intergenic 45.0%
GTTCAACTGTCGTTAGACTC+TGG - chr1_1:49999830-49999849 Msa0026240:CDS 45.0%
TGTCGTTAGACTCTGGTCAA+AGG - chr1_1:49999837-49999856 Msa0026240:CDS 45.0%
! TCAAAGGTCTGCTTCTAGAG+AGG - chr1_1:49999853-49999872 Msa0026240:CDS 45.0%
AAGTGTAACACAGGCACTTG+GGG + chr1_1:49999880-49999899 None:intergenic 45.0%
! AAGGGGATGCATGGTGTTTT+TGG - chr1_1:50000259-50000278 Msa0026240:CDS 45.0%
! TCGTTTGCTACCGTTCCTAA+TGG - chr1_1:50000457-50000476 Msa0026240:intron 45.0%
AACGGCACATCCATTAGGAA+CGG + chr1_1:50000470-50000489 None:intergenic 45.0%
TAAGGAACGGCACATCCATT+AGG + chr1_1:50000475-50000494 None:intergenic 45.0%
TTTCAGGCAAGGGTAAGGAA+CGG + chr1_1:50000488-50000507 None:intergenic 45.0%
!! GCACTTTTTACGCTGACCTT+TGG + chr1_1:50000619-50000638 None:intergenic 45.0%
! AATTGAAGCGGTGGACTTTC+AGG + chr1_1:50000682-50000701 None:intergenic 45.0%
! TTTGATGGCAATTGAAGCGG+TGG + chr1_1:50000691-50000710 None:intergenic 45.0%
TGCTGGAACTTCATCTACAC+AGG + chr1_1:50000722-50000741 None:intergenic 45.0%
! CTTCAGTAAACCACTGACTG+TGG + chr1_1:50000803-50000822 None:intergenic 45.0%
CAGTCAGTGGTTTACTGAAG+TGG - chr1_1:50000803-50000822 Msa0026240:CDS 45.0%
!! CAACTATACTGGTTCTGCAG+GGG - chr1_1:50000928-50000947 Msa0026240:CDS 45.0%
!! AACTATACTGGTTCTGCAGG+GGG - chr1_1:50000929-50000948 Msa0026240:CDS 45.0%
CAAGCAGTCAATGTGAATGC+TGG - chr1_1:50000984-50001003 Msa0026240:CDS 45.0%
AGCAGTCAATGTGAATGCTG+GGG - chr1_1:50000986-50001005 Msa0026240:CDS 45.0%
! GCTTTGTTGCTACAAGATGC+AGG + chr1_1:50001218-50001237 None:intergenic 45.0%
TTACCTTGAAGGACAACCTC+TGG - chr1_1:50001256-50001275 Msa0026240:CDS 45.0%
AGGTTTCACAGCTGCTCTAT+AGG + chr1_1:50001381-50001400 None:intergenic 45.0%
ACCTGAGGACATAATGCCTT+CGG - chr1_1:50001397-50001416 Msa0026240:CDS 45.0%
! CAGTAAGTTGACAGAGAAGC+TGG - chr1_1:50001706-50001725 Msa0026240:CDS 45.0%
TTATTGTGAGGTGGCATTCG+TGG + chr1_1:50001869-50001888 None:intergenic 45.0%
TATGATGAAGAAGTGGGCAC+TGG - chr1_1:50002031-50002050 Msa0026240:CDS 45.0%
TGTCAGGAGTTACAGAAGTC+TGG - chr1_1:50002088-50002107 Msa0026240:CDS 45.0%
GGAGTTACAGAAGTCTGGTT+CGG - chr1_1:50002093-50002112 Msa0026240:CDS 45.0%
! GAGTTACAGAAGTCTGGTTC+GGG - chr1_1:50002094-50002113 Msa0026240:CDS 45.0%
AAAGACAAACTTGCAGGCTG+AGG - chr1_1:50002150-50002169 Msa0026240:intron 45.0%
! CTAAAGCACTTCAAGACGGA+AGG - chr1_1:50002296-50002315 Msa0026240:CDS 45.0%
ACTTGATCCTGAGCTTGGTA+GGG - chr1_1:50002502-50002521 Msa0026240:intron 45.0%
! TGTTTGGAATCGGTCTGTGA+AGG - chr1_1:50002563-50002582 Msa0026240:intron 45.0%
AGAACAGTATCAGGATACCC+AGG + chr1_1:50002662-50002681 None:intergenic 45.0%
CCTGAAGCAAGAACAGTATC+AGG + chr1_1:50002671-50002690 None:intergenic 45.0%
CCTGATACTGTTCTTGCTTC+AGG - chr1_1:50002668-50002687 Msa0026240:intron 45.0%
GTTGATGCAACTGTCAAGTC+TGG - chr1_1:50002838-50002857 Msa0026240:intron 45.0%
! GTCTGGAATTTCAAGACAGG+TGG - chr1_1:50002855-50002874 Msa0026240:intron 45.0%
CTGGTTAAAGCCGGATTTGA+AGG + chr1_1:50002884-50002903 None:intergenic 45.0%
! CTTCAAATCCGGCTTTAACC+AGG - chr1_1:50002882-50002901 Msa0026240:intron 45.0%
TCAAGACAAAGTGAGAGACC+TGG + chr1_1:50002903-50002922 None:intergenic 45.0%
ACACATGACCTCATGTGATG+TGG + chr1_1:50003136-50003155 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - chr1_1:50003466-50003485 Msa0026240:CDS 45.0%
!!! GAGGGAGGGTTTTGGAAAAA+AGG - chr1_1:50003493-50003512 Msa0026240:CDS 45.0%
ATAGAAGACATTGGGAGGAG+AGG - chr1_1:50003534-50003553 Msa0026240:intron 45.0%
TAGAAGACATTGGGAGGAGA+GGG - chr1_1:50003535-50003554 Msa0026240:intron 45.0%
! ACAAAATCCCCCTTGTTTGG+GGG - chr1_1:50003575-50003594 Msa0026240:intron 45.0%
! TTTAGTTCCCCCAAACAAGG+GGG + chr1_1:50003585-50003604 None:intergenic 45.0%
!! GGCTTTGTTTGGGAGTTTGA+AGG + chr1_1:50003745-50003764 None:intergenic 45.0%
AACAAGTTTCAGAGCCGGAT+CGG - chr1_1:50003775-50003794 Msa0026240:intron 45.0%
!! GTTCCTTAACTTGTGCCCTT+AGG - chr1_1:50003994-50004013 Msa0026240:CDS 45.0%
TTACCGTTATCTGTGCTGTC+TGG - chr1_1:50004261-50004280 Msa0026240:CDS 45.0%
ACACCAGACAGCACAGATAA+CGG + chr1_1:50004267-50004286 None:intergenic 45.0%
!! TGTGCTGTCTGGTGTTGTTT+GGG - chr1_1:50004272-50004291 Msa0026240:CDS 45.0%
GGATCTGCAATCAGCTGTTA+TGG - chr1_1:50004326-50004345 Msa0026240:CDS 45.0%
TTCCTAGGGTCATTACACAC+AGG - chr1_1:50004388-50004407 Msa0026240:CDS 45.0%
CACTGGTACTTGGGGAAAAA+TGG - chr1_1:50004499-50004518 Msa0026240:CDS 45.0%
TTTGCGGAGAGAACGATTCT+TGG - chr1_1:50004735-50004754 Msa0026240:five_prime_UTR 45.0%
TTGCGGAGAGAACGATTCTT+GGG - chr1_1:50004736-50004755 Msa0026240:five_prime_UTR 45.0%
GTCCTCCCATTGTCAATGTA+AGG - chr1_1:50004922-50004941 Msa0026240:intron 45.0%
CACAAGTCATCACACTAGGT+AGG + chr1_1:50005291-50005310 None:intergenic 45.0%
ACGAATACGGAGGTAGCTTA+AGG + chr1_1:50005321-50005340 None:intergenic 45.0%
! GGTACTTTTGACGAATACGG+AGG + chr1_1:50005331-50005350 None:intergenic 45.0%
TGAAGCAGAGAAGACTGATG+CGG + chr1_1:50005352-50005371 None:intergenic 45.0%
GCTCTTGTATGCCATAACAG+AGG - chr1_1:50005465-50005484 Msa0026240:intron 45.0%
TATGCCATAACAGAGGGTCA+AGG - chr1_1:50005472-50005491 Msa0026240:intron 45.0%
AGATCCTTGACCCTCTGTTA+TGG + chr1_1:50005479-50005498 None:intergenic 45.0%
TAACTAGTTGCTAGCAGTGC+TGG - chr1_1:50005599-50005618 Msa0026240:five_prime_UTR 45.0%
! GTCACAGCAAGTTGCTTTCT+TGG - chr1_1:50005621-50005640 Msa0026240:five_prime_UTR 45.0%
! CACAGCAAGTTGCTTTCTTG+GGG - chr1_1:50005623-50005642 Msa0026240:five_prime_UTR 45.0%
! CACTGACTACAATTGTTGGG+GGG - chr1_1:50005663-50005682 Msa0026240:five_prime_UTR 45.0%
TGTCCTCTGTATAGAAACGG+AGG - chr1_1:50005725-50005744 Msa0026240:intron 45.0%
GTCCTCTGTATAGAAACGGA+GGG - chr1_1:50005726-50005745 Msa0026240:intron 45.0%
GAACAACGCTAGCAGGTAAA+TGG + chr1_1:50005822-50005841 None:intergenic 45.0%
!! AAAAAAAAAAAAAAAAAAAC+AGG + chr1_1:49996055-49996074 None:intergenic 5.0%
!!! TATTATTTATATTTTGTTTA+AGG - chr1_1:49999592-49999611 Msa0026240:CDS 5.0%
TGTTGGGTTAAAGGAGGCAG+TGG - chr1_1:49996418-49996437 Msa0026240:CDS 50.0%
! GCAGGGTTCGGTTTCCAATT+GGG - chr1_1:49996791-49996810 Msa0026240:intron 50.0%
! CAGGGTTCGGTTTCCAATTG+GGG - chr1_1:49996792-49996811 Msa0026240:intron 50.0%
ACTGAGGCGGTAGAAGAACT+AGG + chr1_1:49996916-49996935 None:intergenic 50.0%
AATGGAGCCCCATGATGACA+TGG - chr1_1:49996966-49996985 Msa0026240:intron 50.0%
TGAATGGCTTGAAGCAGACG+AGG + chr1_1:49996998-49997017 None:intergenic 50.0%
GTCTGCTTCAAGCCATTCAG+AGG - chr1_1:49996999-49997018 Msa0026240:intron 50.0%
!! TCTCTGGCTCTTCCTCTGAA+TGG + chr1_1:49997014-49997033 None:intergenic 50.0%
TTCAGAGGAAGAGCCAGAGA+AGG - chr1_1:49997014-49997033 Msa0026240:intron 50.0%
CCATCAGCTGAATCCTTCTC+TGG + chr1_1:49997030-49997049 None:intergenic 50.0%
CCAGAGAAGGATTCAGCTGA+TGG - chr1_1:49997027-49997046 Msa0026240:intron 50.0%
GATCTGTATCCTCGATCAGC+TGG - chr1_1:49997351-49997370 Msa0026240:intron 50.0%
CACTTGCTTGCTTACAGGCA+GGG - chr1_1:49997585-49997604 Msa0026240:intron 50.0%
ACTTGCTTGCTTACAGGCAG+GGG - chr1_1:49997586-49997605 Msa0026240:intron 50.0%
CTTACAGGCAGGGGCAATTA+TGG - chr1_1:49997595-49997614 Msa0026240:intron 50.0%
! AAAGGTGTGGGGCTTTCTGA+GGG + chr1_1:49997847-49997866 None:intergenic 50.0%
AGAAAGCCCCACACCTTTCA+TGG - chr1_1:49997849-49997868 Msa0026240:intron 50.0%
! ACAGCCTCCATGAAAGGTGT+GGG + chr1_1:49997859-49997878 None:intergenic 50.0%
! GCAACGTTTTCGACAAGCTG+TGG + chr1_1:49998017-49998036 None:intergenic 50.0%
!! TCAACGTCTCAGCTTGTTGG+TGG - chr1_1:49998437-49998456 Msa0026240:intron 50.0%
CTGTAATCGGGTACGAAGCT+TGG - chr1_1:49998463-49998482 Msa0026240:intron 50.0%
! TCGGATCTTTTTCCAGGCCA+GGG + chr1_1:49999244-49999263 None:intergenic 50.0%
! TTCGGATCTTTTTCCAGGCC+AGG + chr1_1:49999245-49999264 None:intergenic 50.0%
CAGATCTCCTGCAGAAGCTT+GGG - chr1_1:49999309-49999328 Msa0026240:CDS 50.0%
GACCAAATCTGGCATGCTTG+TGG - chr1_1:49999508-49999527 Msa0026240:CDS 50.0%
CTCCACAAGCATGCCAGATT+TGG + chr1_1:49999513-49999532 None:intergenic 50.0%
ACGACAGTTGAACGCCACTA+GGG + chr1_1:49999823-49999842 None:intergenic 50.0%
AACGACAGTTGAACGCCACT+AGG + chr1_1:49999824-49999843 None:intergenic 50.0%
! CGTACTTTTCAGCCTCTCTC+TGG - chr1_1:50000334-50000353 Msa0026240:CDS 50.0%
CGTACTTTCAGGCAAGGGTA+AGG + chr1_1:50000493-50000512 None:intergenic 50.0%
TTGCTTGAGTGACTGTGCTG+AGG - chr1_1:50000537-50000556 Msa0026240:CDS 50.0%
! GGTCAGCGTAAAAAGTGCAG+AGG - chr1_1:50000621-50000640 Msa0026240:intron 50.0%
TTGACTGCTTGATCGGGTCT+AGG + chr1_1:50000975-50000994 None:intergenic 50.0%
GCTGGGGAATCATCTTCTTC+AGG - chr1_1:50001002-50001021 Msa0026240:CDS 50.0%
GATCCAGAGGTTGTCCTTCA+AGG + chr1_1:50001262-50001281 None:intergenic 50.0%
TAGAGCAGCTGTGAAACCTG+AGG - chr1_1:50001382-50001401 Msa0026240:CDS 50.0%
!! TCCGAAGGCATTATGTCCTC+AGG + chr1_1:50001401-50001420 None:intergenic 50.0%
AGAAGCTGGAGCAACAGATG+AGG - chr1_1:50001720-50001739 Msa0026240:CDS 50.0%
GAAGCTGGAGCAACAGATGA+GGG - chr1_1:50001721-50001740 Msa0026240:CDS 50.0%
GCAACAGATGAGGGACTCTA+TGG - chr1_1:50001730-50001749 Msa0026240:CDS 50.0%
AACAGTAAGTGACAGGCGAC+TGG - chr1_1:50001895-50001914 Msa0026240:CDS 50.0%
ACAGTAAGTGACAGGCGACT+GGG - chr1_1:50001896-50001915 Msa0026240:CDS 50.0%
TCTTTCGAGGCAATGCACCA+TGG + chr1_1:50001922-50001941 None:intergenic 50.0%
!! CACTGGTCTTGGACCAACTT+TGG - chr1_1:50002048-50002067 Msa0026240:CDS 50.0%
CTGTAACTCCTGACACACCA+AGG + chr1_1:50002083-50002102 None:intergenic 50.0%
AACTTGCAGGCTGAGGAAAC+AGG - chr1_1:50002157-50002176 Msa0026240:intron 50.0%
ATGGACTCTTTCCTCGTCCA+TGG - chr1_1:50002194-50002213 Msa0026240:intron 50.0%
! TGTGTTGACAACCATGGACG+AGG + chr1_1:50002208-50002227 None:intergenic 50.0%
CAGTCACTTGATCCTGAGCT+TGG - chr1_1:50002497-50002516 Msa0026240:intron 50.0%
CACTTGATCCTGAGCTTGGT+AGG - chr1_1:50002501-50002520 Msa0026240:intron 50.0%
TTCAGGGTCTGATCACACCA+TGG - chr1_1:50002685-50002704 Msa0026240:intron 50.0%
CAGGTGGAAGCCTTCAAATC+CGG - chr1_1:50002871-50002890 Msa0026240:intron 50.0%
GTGAGAGACCTGGTTAAAGC+CGG + chr1_1:50002893-50002912 None:intergenic 50.0%
GGAAAAAAGGAAGGAGCGAG+TGG - chr1_1:50003506-50003525 Msa0026240:CDS 50.0%
TTTGGGAGTTTGAAGGGGAG+GGG + chr1_1:50003738-50003757 None:intergenic 50.0%
GTTTGGGAGTTTGAAGGGGA+GGG + chr1_1:50003739-50003758 None:intergenic 50.0%
TGTTTGGGAGTTTGAAGGGG+AGG + chr1_1:50003740-50003759 None:intergenic 50.0%
! TGCCCTAAGGGCACAAGTTA+AGG + chr1_1:50004000-50004019 None:intergenic 50.0%
!! CTGTGCTGTCTGGTGTTGTT+TGG - chr1_1:50004271-50004290 Msa0026240:CDS 50.0%
CACCTGTGTGTAATGACCCT+AGG + chr1_1:50004393-50004412 None:intergenic 50.0%
TTAGAACTGGGATCCTGCAC+TGG - chr1_1:50004482-50004501 Msa0026240:CDS 50.0%
! TTTTCCCCAAGTACCAGTGC+AGG + chr1_1:50004498-50004517 None:intergenic 50.0%
GACTGCTAGCTGTGTAACCA+TGG + chr1_1:50004905-50004924 None:intergenic 50.0%
GTTGGCCATGGTCAAACTCT+CGG + chr1_1:50005050-50005069 None:intergenic 50.0%
TTGAGAGATGCCAATCCTCC+TGG + chr1_1:50005117-50005136 None:intergenic 50.0%
TAGGTAGGTCTGTGTCTGCT+TGG + chr1_1:50005276-50005295 None:intergenic 50.0%
TGCCCTCCGTTTCTATACAG+AGG + chr1_1:50005731-50005750 None:intergenic 50.0%
! CGCAGGGTTCGGTTTCCAAT+TGG - chr1_1:49996790-49996809 Msa0026240:intron 55.0%
CTGCACGCTCTCTTATCAGC+TGG + chr1_1:49996877-49996896 None:intergenic 55.0%
AGTACGGCCAACTGACCAGA+AGG + chr1_1:49997177-49997196 None:intergenic 55.0%
GTATCAAGACGTAGCCGACC+AGG - chr1_1:49997431-49997450 Msa0026240:intron 55.0%
GACGTAGCCGACCAGGTAAT+TGG - chr1_1:49997438-49997457 Msa0026240:intron 55.0%
CCTGCCTGTAAGCAAGCAAG+TGG + chr1_1:49997587-49997606 None:intergenic 55.0%
CCACTTGCTTGCTTACAGGC+AGG - chr1_1:49997584-49997603 Msa0026240:intron 55.0%
! CTTTTCCCTCTCACAGCGAG+TGG - chr1_1:49997786-49997805 Msa0026240:intron 55.0%
AAGAGCCACTCGCTGTGAGA+GGG + chr1_1:49997794-49997813 None:intergenic 55.0%
AAAGAGCCACTCGCTGTGAG+AGG + chr1_1:49997795-49997814 None:intergenic 55.0%
GCGAGTGGCTCTTTCTACTG+TGG - chr1_1:49997801-49997820 Msa0026240:intron 55.0%
! GAAAGGTGTGGGGCTTTCTG+AGG + chr1_1:49997848-49997867 None:intergenic 55.0%
AAGCCCCACACCTTTCATGG+AGG - chr1_1:49997852-49997871 Msa0026240:intron 55.0%
! CAGCCTCCATGAAAGGTGTG+GGG + chr1_1:49997858-49997877 None:intergenic 55.0%
CACAGCCTCCATGAAAGGTG+TGG + chr1_1:49997860-49997879 None:intergenic 55.0%
ATGGGCACAGCCTCCATGAA+AGG + chr1_1:49997865-49997884 None:intergenic 55.0%
!! GATCGGCAGGTACCGATGAT+TGG - chr1_1:49997910-49997929 Msa0026240:intron 55.0%
GAATGAACTTCTCCCTGGCC+TGG - chr1_1:49999229-49999248 Msa0026240:CDS 55.0%
CCAAGCTTCTGCAGGAGATC+TGG + chr1_1:49999311-49999330 None:intergenic 55.0%
CCAGATCTCCTGCAGAAGCT+TGG - chr1_1:49999308-49999327 Msa0026240:CDS 55.0%
TCTCCTGCAGAAGCTTGGGA+TGG - chr1_1:49999313-49999332 Msa0026240:CDS 55.0%
CATCCATCCCAAGCTTCTGC+AGG + chr1_1:49999319-49999338 None:intergenic 55.0%
! GGCTGGAGTTTTCACTCGGA+AGG - chr1_1:49999649-49999668 Msa0026240:CDS 55.0%
! TTGAGCATGTCGACTGACGC+AGG - chr1_1:50000076-50000095 Msa0026240:CDS 55.0%
GGGGAAAACAAGGGGATGCA+TGG - chr1_1:50000250-50000269 Msa0026240:CDS 55.0%
!! GCTGAGCGCACTGACTTCAT+TGG - chr1_1:50000390-50000409 Msa0026240:intron 55.0%
!! CCTGCACGTTCTGAGATTGC+TGG + chr1_1:50000739-50000758 None:intergenic 55.0%
CCAGCAATCTCAGAACGTGC+AGG - chr1_1:50000736-50000755 Msa0026240:intron 55.0%
GACTCTATGGCAGTCTGCGT+TGG - chr1_1:50001743-50001762 Msa0026240:CDS 55.0%
! GCGTTGGCAGTATGCCTTTC+TGG - chr1_1:50001759-50001778 Msa0026240:CDS 55.0%
AGTTTACCGCGACCGGATCT+TGG - chr1_1:50001949-50001968 Msa0026240:intron 55.0%
!! GAAGAAGTGGGCACTGGTCT+TGG - chr1_1:50002037-50002056 Msa0026240:CDS 55.0%
!! AGAAGTCTGGTTCGGGCATG+TGG - chr1_1:50002101-50002120 Msa0026240:CDS 55.0%
TGCAGTACCCTACCAAGCTC+AGG + chr1_1:50002512-50002531 None:intergenic 55.0%
CTGAAGGGCCACATCACATG+AGG - chr1_1:50003125-50003144 Msa0026240:CDS 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG - chr1_1:50003469-50003488 Msa0026240:CDS 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG - chr1_1:50003470-50003489 Msa0026240:CDS 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG - chr1_1:50003471-50003490 Msa0026240:CDS 55.0%
ACATTGGGAGGAGAGGGCTA+TGG - chr1_1:50003541-50003560 Msa0026240:intron 55.0%
GAGTTTGAAGGGGAGGGGAA+GGG + chr1_1:50003733-50003752 None:intergenic 55.0%
! TGGGATCCTGCACTGGTACT+TGG - chr1_1:50004489-50004508 Msa0026240:CDS 55.0%
! GGGATCCTGCACTGGTACTT+GGG - chr1_1:50004490-50004509 Msa0026240:CDS 55.0%
! GGATCCTGCACTGGTACTTG+GGG - chr1_1:50004491-50004510 Msa0026240:CDS 55.0%
CGGAGAGAACGATTCTTGGG+CGG - chr1_1:50004739-50004758 Msa0026240:five_prime_UTR 55.0%
ACTGGAGGAATGCTCGTCGT+TGG + chr1_1:50005068-50005087 None:intergenic 55.0%
GCATTCCTCCAGTTCGTGAC+CGG - chr1_1:50005075-50005094 Msa0026240:intron 55.0%
AGAGATGCCAATCCTCCTGG+AGG + chr1_1:50005114-50005133 None:intergenic 55.0%
CCAAAGGGAACAACGCTAGC+AGG + chr1_1:50005829-50005848 None:intergenic 55.0%
CCTGCTAGCGTTGTTCCCTT+TGG - chr1_1:50005826-50005845 Msa0026240:five_prime_UTR 55.0%
CGGGATCAGTCGTAGCCTTC+AGG - chr1_1:49998342-49998361 Msa0026240:intron 60.0%
! GTGCAGCGGACTCCAAGATC+CGG + chr1_1:50001964-50001983 None:intergenic 60.0%
! TGGTTCGGGCATGTGGAGAG+AGG - chr1_1:50002108-50002127 Msa0026240:intron 60.0%
TTGGGAGGAGAGGGCTATGG+AGG - chr1_1:50003544-50003563 Msa0026240:intron 60.0%
TTGAAGGGGAGGGGAAGGGA+GGG + chr1_1:50003729-50003748 None:intergenic 60.0%
TTTGAAGGGGAGGGGAAGGG+AGG + chr1_1:50003730-50003749 None:intergenic 60.0%
GGAGTTTGAAGGGGAGGGGA+AGG + chr1_1:50003734-50003753 None:intergenic 60.0%
GGAATGCTCGTCGTTGGCCA+TGG + chr1_1:50005062-50005081 None:intergenic 60.0%
AGTTCGTGACCGGCACACCT+CGG - chr1_1:50005085-50005104 Msa0026240:intron 60.0%
AATCCTCCTGGAGGAAGCCG+AGG + chr1_1:50005105-50005124 None:intergenic 60.0%
TCGGCTTCCTCCAGGAGGAT+TGG - chr1_1:50005104-50005123 Msa0026240:intron 60.0%
! AGGGGTGTGTCGCCAGAGAG+AGG + chr1_1:50000349-50000368 None:intergenic 65.0%
AGTGACAGGCGACTGGGCCA+TGG - chr1_1:50001902-50001921 Msa0026240:intron 65.0%
CGGACTCCAAGATCCGGTCG+CGG + chr1_1:50001958-50001977 None:intergenic 65.0%
GGAGTTTGGAGGGGAGGGGA+GGG - chr1_1:50003475-50003494 Msa0026240:CDS 65.0%
TTTGGAGGGGAGGGGAGGGA+GGG - chr1_1:50003479-50003498 Msa0026240:CDS 65.0%
! GTGTGCCGGTCACGAACTGG+AGG + chr1_1:50005083-50005102 None:intergenic 65.0%
! GAGGTGTGCCGGTCACGAAC+TGG + chr1_1:50005086-50005105 None:intergenic 65.0%
TGGAGGAAGCCGAGGTGTGC+CGG + chr1_1:50005097-50005116 None:intergenic 65.0%
ACACCTCGGCTTCCTCCAGG+AGG - chr1_1:50005099-50005118 Msa0026240:intron 65.0%
GGGAGTTTGGAGGGGAGGGG+AGG - chr1_1:50003474-50003493 Msa0026240:CDS 70.0%
GTTTGGAGGGGAGGGGAGGG+AGG - chr1_1:50003478-50003497 Msa0026240:CDS 70.0%
! GGGGAGGGGAGGGAGGGTTT+TGG - chr1_1:50003485-50003504 Msa0026240:CDS 70.0%
GGCACACCTCGGCTTCCTCC+AGG - chr1_1:50005096-50005115 Msa0026240:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 49995663 50005899 49995663 ID=Msa0026240;Name=Msa0026240
chr1_1 mRNA 49995663 50005899 49995663 ID=Msa0026240-mRNA-1;Parent=Msa0026240;Name=Msa0026240-mRNA-1;_AED=0.18;_eAED=0.18;_QI=228|1|1|1|0.83|0.78|19|386|1551
chr1_1 exon 49995663 49996114 49995663 ID=Msa0026240-mRNA-1:exon:14507;Parent=Msa0026240-mRNA-1
chr1_1 exon 49996217 49996300 49996217 ID=Msa0026240-mRNA-1:exon:14506;Parent=Msa0026240-mRNA-1
chr1_1 exon 49996401 49996529 49996401 ID=Msa0026240-mRNA-1:exon:14505;Parent=Msa0026240-mRNA-1
chr1_1 exon 49996624 49996692 49996624 ID=Msa0026240-mRNA-1:exon:14504;Parent=Msa0026240-mRNA-1
chr1_1 exon 49996802 49996882 49996802 ID=Msa0026240-mRNA-1:exon:14503;Parent=Msa0026240-mRNA-1
chr1_1 exon 49998659 49998763 49998659 ID=Msa0026240-mRNA-1:exon:14502;Parent=Msa0026240-mRNA-1
chr1_1 exon 49998856 49999086 49998856 ID=Msa0026240-mRNA-1:exon:14501;Parent=Msa0026240-mRNA-1
chr1_1 exon 49999193 50000407 49999193 ID=Msa0026240-mRNA-1:exon:14500;Parent=Msa0026240-mRNA-1
chr1_1 exon 50000531 50000614 50000531 ID=Msa0026240-mRNA-1:exon:14499;Parent=Msa0026240-mRNA-1
chr1_1 exon 50000776 50001919 50000776 ID=Msa0026240-mRNA-1:exon:14498;Parent=Msa0026240-mRNA-1
chr1_1 exon 50002004 50002125 50002004 ID=Msa0026240-mRNA-1:exon:14497;Parent=Msa0026240-mRNA-1
chr1_1 exon 50002204 50002356 50002204 ID=Msa0026240-mRNA-1:exon:14496;Parent=Msa0026240-mRNA-1
chr1_1 exon 50003090 50003251 50003090 ID=Msa0026240-mRNA-1:exon:14495;Parent=Msa0026240-mRNA-1
chr1_1 exon 50003384 50003542 50003384 ID=Msa0026240-mRNA-1:exon:14494;Parent=Msa0026240-mRNA-1
chr1_1 exon 50003644 50003760 50003644 ID=Msa0026240-mRNA-1:exon:14493;Parent=Msa0026240-mRNA-1
chr1_1 exon 50003904 50004014 50003904 ID=Msa0026240-mRNA-1:exon:14492;Parent=Msa0026240-mRNA-1
chr1_1 exon 50004110 50004767 50004110 ID=Msa0026240-mRNA-1:exon:14491;Parent=Msa0026240-mRNA-1
chr1_1 exon 50005593 50005698 50005593 ID=Msa0026240-mRNA-1:exon:14490;Parent=Msa0026240-mRNA-1
chr1_1 exon 50005812 50005899 50005812 ID=Msa0026240-mRNA-1:exon:14489;Parent=Msa0026240-mRNA-1
chr1_1 five_prime_UTR 50005812 50005899 50005812 ID=Msa0026240-mRNA-1:five_prime_utr;Parent=Msa0026240-mRNA-1
chr1_1 five_prime_UTR 50005593 50005698 50005593 ID=Msa0026240-mRNA-1:five_prime_utr;Parent=Msa0026240-mRNA-1
chr1_1 five_prime_UTR 50004734 50004767 50004734 ID=Msa0026240-mRNA-1:five_prime_utr;Parent=Msa0026240-mRNA-1
chr1_1 CDS 50004110 50004733 50004110 ID=Msa0026240-mRNA-1:cds;Parent=Msa0026240-mRNA-1
chr1_1 CDS 50003904 50004014 50003904 ID=Msa0026240-mRNA-1:cds;Parent=Msa0026240-mRNA-1
chr1_1 CDS 50003644 50003760 50003644 ID=Msa0026240-mRNA-1:cds;Parent=Msa0026240-mRNA-1
chr1_1 CDS 50003384 50003542 50003384 ID=Msa0026240-mRNA-1:cds;Parent=Msa0026240-mRNA-1
chr1_1 CDS 50003090 50003251 50003090 ID=Msa0026240-mRNA-1:cds;Parent=Msa0026240-mRNA-1
chr1_1 CDS 50002204 50002356 50002204 ID=Msa0026240-mRNA-1:cds;Parent=Msa0026240-mRNA-1
chr1_1 CDS 50002004 50002125 50002004 ID=Msa0026240-mRNA-1:cds;Parent=Msa0026240-mRNA-1
chr1_1 CDS 50000776 50001919 50000776 ID=Msa0026240-mRNA-1:cds;Parent=Msa0026240-mRNA-1
chr1_1 CDS 50000531 50000614 50000531 ID=Msa0026240-mRNA-1:cds;Parent=Msa0026240-mRNA-1
chr1_1 CDS 49999193 50000407 49999193 ID=Msa0026240-mRNA-1:cds;Parent=Msa0026240-mRNA-1
chr1_1 CDS 49998856 49999086 49998856 ID=Msa0026240-mRNA-1:cds;Parent=Msa0026240-mRNA-1
chr1_1 CDS 49998659 49998763 49998659 ID=Msa0026240-mRNA-1:cds;Parent=Msa0026240-mRNA-1
chr1_1 CDS 49996802 49996882 49996802 ID=Msa0026240-mRNA-1:cds;Parent=Msa0026240-mRNA-1
chr1_1 CDS 49996624 49996692 49996624 ID=Msa0026240-mRNA-1:cds;Parent=Msa0026240-mRNA-1
chr1_1 CDS 49996401 49996529 49996401 ID=Msa0026240-mRNA-1:cds;Parent=Msa0026240-mRNA-1
chr1_1 CDS 49996217 49996300 49996217 ID=Msa0026240-mRNA-1:cds;Parent=Msa0026240-mRNA-1
chr1_1 CDS 49996049 49996114 49996049 ID=Msa0026240-mRNA-1:cds;Parent=Msa0026240-mRNA-1
chr1_1 three_prime_UTR 49995663 49996048 49995663 ID=Msa0026240-mRNA-1:three_prime_utr;Parent=Msa0026240-mRNA-1
Gene Sequence

>Msa0026240

ATGGGAAGTAGAGGTCAAAAGCGTCCAGAAATGGTAGATGAACTGCCAGCTGATAAGAGAGCGTGCAGTTCGTTAGATTTTAGACCTAGTTCTTCTACCGCCTCAGTTCAAACCGATGTAAGTTCAACACAATCGGCAATGGAGCCCCATGATGACATGGATACTTCCTCGTCTGCTTCAAGCCATTCAGAGGAAGAGCCAGAGAAGGATTCAGCTGATGGATCATGTGATTCAGATGAAATGGAGCACTATCATAGCACTCTCCACGAATATCATAGACAGAGACTATCGAGTGATCATGGAAAATTTAAAACTATTATATCAAGCTTGAGTGGACAAACTGAACCTTCTGGTCAGTTGGCCGTACTCACTGAACTCTGCGAAGTTCTGTCATTTTGTACAGAGGGTTCAATCTCCAGCATGACTTCAGACTTGTTATCACCACTACTTGTAAAGCTTGCAAAACATGAGAGTAACCCAGAGATAATGTTGTTATCTATAAGGGCTATCACTTATATATGTGATCTGTATCCTCGATCAGCTGGTTTTCTTGTTCGTCATGATGCTGTTTCTGCTTTATGTCAAAGGTTACTAACTATTGAGTATCAAGACGTAGCCGACCAGTGTCTTCAAGCATTGGAGAAAATATCGAGAGAACAACCACTTGCTTGCTTACAGGCAGGGGCAATTATGGCTGTTCTGAATTATATTGATTTCTTCTCAACAAGCATACAGCGAGTGGCTCTTTCTACTGTGGTCAACATATGCAAGAAGCTTCCCTCAGAAAGCCCCACACCTTTCATGGAGGCTGTGCCCATATTATGCAATCTTCTTCTATATGAGGATCGGCAGCTTGTCGAAAACGTTGCTACCTGCTTAATCAAAATTGTTGATCGAGTTTCTCATTCCTCAGAAATGTCGGATGAACTTTGTAAGCATGGATTGATTCAACAGGTCACACATCTCTTAAGTGTAAATGGCCGAGCGACTCTATCCCAATTAATTTATAATGGTTTGATAGGATTACTTGTCAAACTTTCATCGGGATCAGTCGTAGCCTTCAGGACTTTGTATGAGTTAAATATAAGCATCACATTGAGAGATATATTGTCTGCATTTGACCTCTCACATGGTGTATCAACGTCTCAGCTTGTTGGTGGACACTGTAATCGGGTATATGAAGTACTCAAATTGCTGAATGAACTTCTCCCTGGCCTGGAAAAAGATCCGAATAATCAACTAGCATTGGACAAAGAATCCTTCCTAGCTAATCATCCAGATCTCCTGCAGAAGCTTGGGATGGATGTGTTTCCCATGTTGATCCAGGTGTTTAATTCTGGTGCAAGTTTATCCGTTTGCCATGGATGTCTATTCGTCATGTACAAGTTTGTTTGTTTGACCAAATCTGGCATGCTTGTGGAGCTTCTTAAGAACGCCAATATTTCAAGTTTTTTGGCTGGAGTTTTCACTCGGAAGGATCATCATATGCTAATGTTAGCCTTACAGATAGCTGAGATAATCCTTCAAAATTTTTCTGATATTTTCTTGAAGTTATTTATAAAGGAGGGTGTCTTTTTTGCCATTGAGGCACTCTTAACACCAGAAAGATCATCAAAATTGGTGTACCCTAGTGGCGTTCAACTGTCGTTAGACTCTGGTCAAAGGTCTGCTTCTAGAGAGGTCCCCAAGTGCCTGTGTTACACTTTTTCAACTGCCCAATCTCCTACATCATCAGAAGCCAAAAAGTGCAAACTTGACAAAGACTCTGTTCATAACCTTGCAGAGCATATTAAAACAAAATACTTGGCACCGGAATTATATGATTCTGAGAAAGGATTGACTGATATTTTGAAGAATCTCAGAGCACTGTCTAATGATTTGTTGAGCATGTCGACTGACGCAGGTGCTCTTGCTGTGCATGAAGAGAAGATCAATAGGGTACTGGATCAAATTATGGACAAGCTTATTGGCAAGGAAGAAGTTTCTACTTTTGAATTTATTGAGAGTGGAGTTGCAAAAGCACTTCTTAATTATTTATCACTTGGCCAATATATGGGGGAAAACAAGGGGATGCATGGTGTTTTTGGTCATAATGCTGTGATAGAAAAACGATTTGAGGCTTTAGCTAGTATATGCTTACGTACTTTTCAGCCTCTCTCTGGCGACACACCCCTTTCTATATTAATCAGGAATCTGCTGAGCGCACTGACTTCATTGGAAGCTTTTCCTATTATTCTGAGCAACGTACAAAAAATGAGAAATTCGTTTGCTACCGTTCCTAATGGATGTGCCGTTCCTTACCCTTGCCTGAAAGTACGTTTTGTTAAGGAGGAGAAAGAAACTTGCTTGAGTGACTGTGCTGAGGATTTTTTTACTGTCGACCCTTTTTCTTCTTTGCACTCAATTGAAAGATATCTATGGCCAAAGGTCAGCGTAAAAAGTGCAGAGGATGAGAAATTATCATCTGGTCAAGTAGTGTTGCAACCTGAAAGTCCACCGCTTCAATTGCCATCAAATACAAGGTCCTGTGTAGATGAAGTTCCAGCAATCTCAGAACGTGCAGGCATGTCGACAGATCTATGTGAAACACAGGGGGAAGAGCCAAAGACATCACATCCTAGACCCGATCAAGCAGTCAATGTGAATGCTGGGGAATCATCTTCTTCAGGAATTCAGATTGCAGAACAAGAAATGCATTTTGTTGCAGAATCAGACTCAAAACTAGGAAAAGAGCATCCTGCATCTTGTAGCAACAAAGCTGCTGATAAACTTATTTTTTACCTTGAAGGACAACCTCTGGATCCTAAATTGACTCTATATCAGGCAATTCTTGGCCAAATAGTAAAACAAAATGACAGTGGTGTTAGTGCAAAATTGTGGAGTCATGTGCATACATTAACCTATAGAGCAGCTGTGAAACCTGAGGACATAATGCCTTCGGATTGTCATTCTTCATCTCAAGATTTTCCTCATGATAAAGTTTTAGCATTATATCAGCGGACACCTTTTTTATCAGACATGTTCTATAGTGAACTTGTTTCTGATTTGGAGAAGTCAAGTCCAACTTATGATATTCTGTTTCTTCTTAAAAGCTTGGAAGGCATGAACAGATTTATTTTTCATCTCATGTCACGCGAAAGAATGTGTGCTTTTGCTGAAGGTAAAGTTGATAATCTGGATAGCCTAAAAATAACAGTTCCTTCTGTCCAACTAAATGAGTTCGTGAGCAGTAAGTTGACAGAGAAGCTGGAGCAACAGATGAGGGACTCTATGGCAGTCTGCGTTGGCAGTATGCCTTTCTGGTGTAATCAGTTATTGGCTTCTTGTCCTTTCCTATTCAGCTTTGAAGCAAGATGCAAGTACTTCAAACTGGCAGCATTTGGTCAGCCACGAATGCCACCTCACAATAACTCTGAAACAGTAAGTGACAGGCGACTGGGCCATGGTGCATTGCCTCGAAAGAAGTTTTTAGTTTACCGCGACCGGATCTTGGAGTCCGCTGCACAAATGATGAAACTACATGCCAGTCATAAAGTGGTTCTTGAAGTGGAATATGATGAAGAAGTGGGCACTGGTCTTGGACCAACTTTGGAATTTTATACCTTGGTGTGTCAGGAGTTACAGAAGTCTGGTTCGGGCATGTGGAGAGAGGATGCTTCTTCATATACCATAAAGACAAACTTGCAGGCTGAGGAAACAGGAATCCATTCTCTTTATGGACTCTTTCCTCGTCCATGGTTGTCAACACAAGATACATCTGGTGGCATACAGTTCTCTGAAGTAACAAATAAATTTTTCCTTTTAGGTCAAGTTGTTGCTAAAGCACTTCAAGACGGAAGGGTCTTAGATCTCCACTTTTCTAAAGCCTTCTATAAACTTATTCTTGGAAAGGAACTTTATCTTTACGACATACAGTCACTTGATCCTGAGCTTGGTAGGGTACTGCATGAGTTTCAAGCACTAGTTAACAGGAAATTTTGTTTGGAATCGGTCTGTGAAGGAAATTCTGAGTTGGAACAGGGACTAAGCTTTAGAGATTCCAGAATTGAGGATCTTTGTCTTGATTTTACTCTTCCTGGGTATCCTGATACTGTTCTTGCTTCAGGGTCTGATCACACCATGGTAAATATGAGAAACCTGGAGGATTATGTTTCACTTATTGTTGATGCAACTGTCAAGTCTGGAATTTCAAGACAGGTGGAAGCCTTCAAATCCGGCTTTAACCAGGTTTTTCCCATTGAACATCTTCAGATTTTCTACGAAGAAGAACTTGAGCGTATACTTTGCGGAGAGAACGATTCTTGGGCGATCAATGAGCTCGCAGATCACATTAAGTTCGACCATGGTTACACAGCTAGCAGTCCTCCCATTGTCAATTTGTTGGAAATTATCCGAGAGTTTGACCATGGCCAACGACGAGCATTCCTCCAGTTCGTGACCGGCACACCTCGGCTTCCTCCAGGAGGATTGGCATCTCTCAATCCGAAGTTGACTATTGTCCGAAAGCATTGTAGCAACCAAGCAGACACAGACCTACCTAGTGTGATGACTTGTGCAAATTACCTTAAGCTACCTCCGTATTCGTCAAAAGAGAAGATGAAAGAGAAGCTCTTGTATGCCATAACAGAGGGTCAAGGATCTTTCCACCTATCATGA
Protein sequence

>Msa0026240

MGSRGQKRPEMVDELPADKRACSSLDFRPSSSTASVQTDVSSTQSAMEPHDDMDTSSSASSHSEEEPEKDSADGSCDSDEMEHYHSTLHEYHRQRLSSDHGKFKTIISSLSGQTEPSGQLAVLTELCEVLSFCTEGSISSMTSDLLSPLLVKLAKHESNPEIMLLSIRAITYICDLYPRSAGFLVRHDAVSALCQRLLTIEYQDVADQCLQALEKISREQPLACLQAGAIMAVLNYIDFFSTSIQRVALSTVVNICKKLPSESPTPFMEAVPILCNLLLYEDRQLVENVATCLIKIVDRVSHSSEMSDELCKHGLIQQVTHLLSVNGRATLSQLIYNGLIGLLVKLSSGSVVAFRTLYELNISITLRDILSAFDLSHGVSTSQLVGGHCNRVYEVLKLLNELLPGLEKDPNNQLALDKESFLANHPDLLQKLGMDVFPMLIQVFNSGASLSVCHGCLFVMYKFVCLTKSGMLVELLKNANISSFLAGVFTRKDHHMLMLALQIAEIILQNFSDIFLKLFIKEGVFFAIEALLTPERSSKLVYPSGVQLSLDSGQRSASREVPKCLCYTFSTAQSPTSSEAKKCKLDKDSVHNLAEHIKTKYLAPELYDSEKGLTDILKNLRALSNDLLSMSTDAGALAVHEEKINRVLDQIMDKLIGKEEVSTFEFIESGVAKALLNYLSLGQYMGENKGMHGVFGHNAVIEKRFEALASICLRTFQPLSGDTPLSILIRNLLSALTSLEAFPIILSNVQKMRNSFATVPNGCAVPYPCLKVRFVKEEKETCLSDCAEDFFTVDPFSSLHSIERYLWPKVSVKSAEDEKLSSGQVVLQPESPPLQLPSNTRSCVDEVPAISERAGMSTDLCETQGEEPKTSHPRPDQAVNVNAGESSSSGIQIAEQEMHFVAESDSKLGKEHPASCSNKAADKLIFYLEGQPLDPKLTLYQAILGQIVKQNDSGVSAKLWSHVHTLTYRAAVKPEDIMPSDCHSSSQDFPHDKVLALYQRTPFLSDMFYSELVSDLEKSSPTYDILFLLKSLEGMNRFIFHLMSRERMCAFAEGKVDNLDSLKITVPSVQLNEFVSSKLTEKLEQQMRDSMAVCVGSMPFWCNQLLASCPFLFSFEARCKYFKLAAFGQPRMPPHNNSETVSDRRLGHGALPRKKFLVYRDRILESAAQMMKLHASHKVVLEVEYDEEVGTGLGPTLEFYTLVCQELQKSGSGMWREDASSYTIKTNLQAEETGIHSLYGLFPRPWLSTQDTSGGIQFSEVTNKFFLLGQVVAKALQDGRVLDLHFSKAFYKLILGKELYLYDIQSLDPELGRVLHEFQALVNRKFCLESVCEGNSELEQGLSFRDSRIEDLCLDFTLPGYPDTVLASGSDHTMVNMRNLEDYVSLIVDATVKSGISRQVEAFKSGFNQVFPIEHLQIFYEEELERILCGENDSWAINELADHIKFDHGYTASSPPIVNLLEIIREFDHGQRRAFLQFVTGTPRLPPGGLASLNPKLTIVRKHCSNQADTDLPSVMTCANYLKLPPYSSKEKMKEKLLYAITEGQGSFHLS*