Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699120 | RHN62931.1 | 95.661 | 484 | 20 | 1 | 1 | 484 | 1 | 483 | 0.0 | 929 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699120 | sp|Q84TK1|BH010_ARATH | 35.547 | 512 | 219 | 15 | 15 | 482 | 12 | 456 | 2.84e-73 | 241 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699120 | A0A396IDL8 | 95.661 | 484 | 20 | 1 | 1 | 484 | 1 | 483 | 0.0 | 929 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0699120 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0615890 | Msa0699120 | 0.878457 | 2.764929e-69 | -8.615850e-47 |
| Msa0699120 | Msa0918560 | 0.802434 | 5.620194e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699120 | MtrunA17_Chr4g0052821 | 95.661 | 484 | 20 | 1 | 1 | 484 | 1 | 483 | 0.0 | 929 |
| Msa0699120 | MtrunA17_Chr4g0052841 | 76.162 | 495 | 91 | 7 | 1 | 481 | 1 | 482 | 0.0 | 676 |
| Msa0699120 | MtrunA17_Chr3g0131691 | 27.386 | 241 | 140 | 6 | 257 | 469 | 243 | 476 | 5.25e-17 | 83.6 |
| Msa0699120 | MtrunA17_Chr0c01g0489461 | 25.128 | 195 | 129 | 3 | 292 | 471 | 197 | 389 | 5.05e-14 | 73.9 |
| Msa0699120 | MtrunA17_Chr1g0185621 | 30.247 | 162 | 90 | 5 | 284 | 432 | 463 | 614 | 2.85e-12 | 68.9 |
| Msa0699120 | MtrunA17_Chr8g0366751 | 29.032 | 155 | 105 | 2 | 285 | 436 | 456 | 608 | 4.96e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699120 | AT2G31220.1 | 35.616 | 511 | 218 | 15 | 16 | 482 | 2 | 445 | 2.43e-74 | 241 |
| Msa0699120 | AT2G31220.2 | 35.547 | 512 | 219 | 15 | 15 | 482 | 12 | 456 | 2.89e-74 | 241 |
| Msa0699120 | AT1G06170.2 | 35.729 | 487 | 217 | 16 | 11 | 482 | 6 | 411 | 1.73e-70 | 230 |
| Msa0699120 | AT1G06170.1 | 35.729 | 487 | 217 | 16 | 11 | 482 | 6 | 411 | 1.73e-70 | 230 |
| Msa0699120 | AT2G31210.1 | 33.922 | 510 | 213 | 17 | 11 | 481 | 1 | 425 | 3.41e-69 | 227 |
| Msa0699120 | AT1G32640.1 | 28.125 | 160 | 90 | 4 | 285 | 436 | 446 | 588 | 1.06e-13 | 73.9 |
| Msa0699120 | AT3G24140.1 | 25.123 | 203 | 131 | 4 | 292 | 476 | 199 | 398 | 2.93e-12 | 68.9 |
| Msa0699120 | AT3G24140.2 | 25.123 | 203 | 131 | 4 | 292 | 476 | 199 | 398 | 3.21e-12 | 68.6 |
| Msa0699120 | AT5G46760.1 | 33.974 | 156 | 89 | 5 | 285 | 436 | 409 | 554 | 5.08e-12 | 68.6 |
| Msa0699120 | AT4G17880.1 | 28.947 | 152 | 98 | 2 | 285 | 436 | 410 | 551 | 6.64e-12 | 68.2 |
| Msa0699120 | AT5G65640.1 | 28.902 | 173 | 105 | 3 | 284 | 456 | 171 | 325 | 3.25e-11 | 65.1 |
| Msa0699120 | AT3G26744.1 | 26.531 | 196 | 131 | 6 | 290 | 479 | 306 | 494 | 4.99e-11 | 65.5 |
| Msa0699120 | AT3G26744.4 | 26.531 | 196 | 131 | 6 | 290 | 479 | 306 | 494 | 4.99e-11 | 65.5 |
| Msa0699120 | AT3G26744.2 | 26.531 | 196 | 131 | 6 | 290 | 479 | 306 | 494 | 4.99e-11 | 65.5 |
| Msa0699120 | AT1G12860.2 | 25.294 | 170 | 109 | 3 | 290 | 452 | 266 | 424 | 9.08e-11 | 64.3 |
Find 127 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATTTACTTTGGTGGAATT+TGG | 0.152678 | 4_4:+69710302 | Msa0699110:intron |
| CAGTTTGCTCATGCATATTT+TGG | 0.176939 | 4_4:+69711221 | Msa0699110:intron |
| AGGGATTGTAGCTTTGTTTA+TGG | 0.188979 | 4_4:+69710816 | Msa0699110:intron |
| CACTTGATTTGGCATGGTTT+GGG | 0.215941 | 4_4:+69711135 | Msa0699110:intron |
| CAACAACATGGATAACATTT+TGG | 0.230373 | 4_4:-69710927 | Msa0699120:CDS |
| GAACCTTCCTGCACAGTTTC+CGG | 0.273029 | 4_4:-69710567 | Msa0699120:CDS |
| CCACTTGATTTGGCATGGTT+TGG | 0.275899 | 4_4:+69711134 | Msa0699110:intron |
| TGTGTAGTTGGTGGTATTCT+TGG | 0.280012 | 4_4:+69710840 | Msa0699110:intron |
| ATAGCATTGAAGAGAATTTC+AGG | 0.287093 | 4_4:-69711093 | Msa0699120:CDS |
| TCAAGGAATGGTTCTCGTTT+TGG | 0.293055 | 4_4:-69710491 | Msa0699120:CDS |
| AGACCAATGAGTTCAGTTTC+AGG | 0.294029 | 4_4:-69711250 | None:intergenic |
| TATTTACTTTGGTGGAATTT+GGG | 0.298058 | 4_4:+69710303 | Msa0699110:intron |
| GCTGTTTGTTTCCAAGGTTA+TGG | 0.321288 | 4_4:-69709671 | Msa0699120:CDS |
| TTACCTGCAACCACTTGATT+TGG | 0.325403 | 4_4:+69711124 | Msa0699110:intron |
| TGGGGAGAGTTATTATCTTC+TGG | 0.329534 | 4_4:+69711154 | Msa0699110:intron |
| TTTGTTTATGGTTGTGTAGT+TGG | 0.331934 | 4_4:+69710828 | Msa0699110:intron |
| CAGCAGTTGTCCCACATAAT+AGG | 0.332222 | 4_4:-69709401 | Msa0699120:CDS |
| CTCCTCGAGTAATGGAAATT+AGG | 0.333180 | 4_4:+69710665 | Msa0699110:intron |
| GAGATTGAGGCAATTCTCTA+AGG | 0.339121 | 4_4:+69710543 | Msa0699110:intron |
| AGCTGTCACATGAAGCCTTT+TGG | 0.351110 | 4_4:-69709820 | Msa0699120:CDS |
| CTTGAGTTGTCTGAGCCTAT+TGG | 0.353217 | 4_4:+69710626 | Msa0699110:intron |
| AACATTGCACAACAAAATCT+TGG | 0.361426 | 4_4:-69710974 | Msa0699120:CDS |
| GGACCCTAGTGCTCAGGATA+TGG | 0.374887 | 4_4:-69710876 | Msa0699120:CDS |
| TTGGAACTTAACCATGTTGC+AGG | 0.378869 | 4_4:-69709637 | Msa0699120:CDS |
| TATCAACCTTGCTATTGAAC+AGG | 0.396384 | 4_4:+69709587 | Msa0699110:intron |
| TTGCTTGCTGTTTGTTTCCA+AGG | 0.397168 | 4_4:-69709677 | Msa0699120:CDS |
| TTGGTGGTATTCTTGGTGAT+TGG | 0.402907 | 4_4:+69710847 | Msa0699110:intron |
| ATGAGGGTCTTGAATGGTTG+AGG | 0.403582 | 4_4:+69710796 | Msa0699110:intron |
| TTTATTGTTATTTACTTTGG+TGG | 0.406527 | 4_4:+69710295 | Msa0699110:intron |
| CAAAATATGCATGAGCAAAC+TGG | 0.407375 | 4_4:-69711220 | Msa0699120:CDS |
| CAAAATCTTGGTTTGAACAT+AGG | 0.414981 | 4_4:-69710962 | Msa0699120:CDS |
| TGGTGAAGATTTAGTACATC+TGG | 0.421373 | 4_4:+69710764 | Msa0699110:intron |
| ATGGAGGGAGATGGAGGTAT+GGG | 0.422492 | 4_4:-69710455 | Msa0699120:CDS |
| GGGGATGAGATGGAGGGAGA+TGG | 0.422522 | 4_4:-69710464 | Msa0699120:CDS |
| ATGCAAGTGCTATAGCAAAC+AGG | 0.424664 | 4_4:-69709452 | Msa0699120:CDS |
| ATAGATGAAGCTGAGGATCT+AGG | 0.426468 | 4_4:+69710737 | Msa0699110:intron |
| GATGGAGGGAGATGGAGGTA+TGG | 0.426821 | 4_4:-69710456 | Msa0699120:CDS |
| ATGCCAAATCAAGTGGTTGC+AGG | 0.427884 | 4_4:-69711127 | Msa0699120:CDS |
| AGTGAATGAGCTGAAACTAT+TGG | 0.429652 | 4_4:-69709908 | Msa0699120:CDS |
| TTTCTTGGAGACCTTCCAAT+AGG | 0.433519 | 4_4:-69710641 | Msa0699120:CDS |
| GAGACATCTTCCAGGTGTTG+TGG | 0.439965 | 4_4:+69711031 | Msa0699110:intron |
| AAAATCTTGGTTTGAACATA+GGG | 0.440034 | 4_4:-69710961 | Msa0699120:CDS |
| AAACAGGGTGATTGATGTTC+TGG | 0.444364 | 4_4:-69709436 | Msa0699120:CDS |
| TGGTGGAGGGGATGAGATGG+AGG | 0.452096 | 4_4:-69710471 | Msa0699120:CDS |
| GATGTCTCCACTTATACAAA+TGG | 0.460153 | 4_4:-69711016 | Msa0699120:CDS |
| TATAAGTGGAGACATCTTCC+AGG | 0.463314 | 4_4:+69711023 | Msa0699110:intron |
| GAGGTCCTTATGCTTCCATC+TGG | 0.463883 | 4_4:+69709793 | Msa0699110:intron |
| AGTGAATCCATTTGTATAAG+TGG | 0.466255 | 4_4:+69711009 | Msa0699110:intron |
| CAAGAAAACTCCTCGAGTAA+TGG | 0.468045 | 4_4:+69710657 | Msa0699110:intron |
| AGACATCTTCCAGGTGTTGT+GGG | 0.476303 | 4_4:+69711032 | Msa0699110:intron |
| ACAACCTACATCCTATTATG+TGG | 0.478099 | 4_4:+69709390 | Msa0699110:intron |
| GATGAGATGGAGGGAGATGG+AGG | 0.485707 | 4_4:-69710461 | Msa0699120:CDS |
| CAAACTGTTTCAGAGAAAGA+AGG | 0.486584 | 4_4:-69709704 | Msa0699120:CDS |
| AACTGTGCAGGAAGGTTCAT+AGG | 0.487200 | 4_4:+69710572 | Msa0699110:intron |
| TCATCACAACCCACAACACC+TGG | 0.490418 | 4_4:-69711041 | Msa0699120:CDS |
| AGTTGGGTTTGTGATGCAAA+TGG | 0.496699 | 4_4:+69710697 | Msa0699110:intron |
| ACAAAGAAGAGAGCAATTGA+AGG | 0.497369 | 4_4:-69710354 | Msa0699120:CDS |
| CTAAGGGCCGGAAACTGTGC+AGG | 0.501150 | 4_4:+69710560 | Msa0699110:intron |
| TGAGGGTCTTGAATGGTTGA+GGG | 0.501208 | 4_4:+69710797 | Msa0699110:intron |
| TGCAACCACTTGATTTGGCA+TGG | 0.510199 | 4_4:+69711129 | Msa0699110:intron |
| CTTCCATCTGGATCACCAAA+AGG | 0.510562 | 4_4:+69709805 | Msa0699110:intron |
| AGATGGAGGTATGGGAGTGT+CGG | 0.512294 | 4_4:-69710447 | Msa0699120:CDS |
| GGAAGGTTCATAGGAAATAG+AGG | 0.514568 | 4_4:+69710581 | Msa0699110:intron |
| TAGTTTCCTGTTCAATAGCA+AGG | 0.522557 | 4_4:-69709593 | Msa0699120:intron |
| ACGAGAACCATTCCTTGAGT+TGG | 0.523595 | 4_4:+69710496 | Msa0699110:intron |
| GGTTATGGAGGAACTTCAGT+TGG | 0.523976 | 4_4:-69709656 | Msa0699120:CDS |
| TCTCCTGAAACTGAACTCAT+TGG | 0.525396 | 4_4:+69711247 | Msa0699110:intron |
| GGTGTATCAGAATTCGAGTT+GGG | 0.534079 | 4_4:-69710897 | Msa0699120:CDS |
| TAGTCCATATCCTGAGCACT+AGG | 0.537172 | 4_4:+69710872 | Msa0699110:intron |
| CTGAAGTTCCTCCATAACCT+TGG | 0.541600 | 4_4:+69709660 | Msa0699110:intron |
| GTTTATGGTTGTGTAGTTGG+TGG | 0.542610 | 4_4:+69710831 | Msa0699110:intron |
| TAGACGTGAGGGAGAGATTG+AGG | 0.548170 | 4_4:+69710530 | Msa0699110:intron |
| GGAGAAGAAAAGACACGAGA+TGG | 0.548898 | 4_4:-69709884 | Msa0699120:CDS |
| AAGACAGTGAGGTTGATGTT+CGG | 0.551962 | 4_4:-69709750 | Msa0699120:CDS |
| GAGTTGGGACCCTAGTGCTC+AGG | 0.552970 | 4_4:-69710882 | Msa0699120:CDS |
| AACACCTTCTGCCATTGTGT+CGG | 0.553819 | 4_4:+69711186 | Msa0699110:intron |
| GTGATCCAGATGGAAGCATA+AGG | 0.554959 | 4_4:-69709798 | Msa0699120:CDS |
| ACATCTGGTGAAGGATAATG+AGG | 0.556346 | 4_4:+69710779 | Msa0699110:intron |
| GGTGGAGGGGATGAGATGGA+GGG | 0.559231 | 4_4:-69710470 | Msa0699120:CDS |
| TGGGTTTGTGATGCAAATGG+TGG | 0.560503 | 4_4:+69710700 | Msa0699110:intron |
| TTTGTGATGCAAATGGTGGA+TGG | 0.560585 | 4_4:+69710704 | Msa0699110:intron |
| AGAGAATTTCAGGCCTTCTG+TGG | 0.563104 | 4_4:-69711083 | Msa0699120:CDS |
| TGAGGCAATTCTCTAAGGGC+CGG | 0.565775 | 4_4:+69710548 | Msa0699110:intron |
| ACTTGATTTGGCATGGTTTG+GGG | 0.567633 | 4_4:+69711136 | Msa0699110:intron |
| GAACCATTCCTTGAGTTGGT+AGG | 0.569140 | 4_4:+69710500 | Msa0699110:intron |
| ATGGAAGCATAAGGACCTCA+TGG | 0.569401 | 4_4:-69709789 | Msa0699120:CDS |
| TCACTTATGCAGGTAACTGA+AGG | 0.570501 | 4_4:-69709486 | Msa0699120:intron |
| GAATGAGCTGAAACTATTGG+AGG | 0.575575 | 4_4:-69709905 | Msa0699120:CDS |
| CCAAACCATGCCAAATCAAG+TGG | 0.578899 | 4_4:-69711134 | Msa0699120:CDS |
| TGTCCCACATAATAGGATGT+AGG | 0.580034 | 4_4:-69709394 | None:intergenic |
| GAATTTCAGGCCTTCTGTGG+AGG | 0.580177 | 4_4:-69711080 | Msa0699120:CDS |
| AGGATAATGAGGGTCTTGAA+TGG | 0.581908 | 4_4:+69710790 | Msa0699110:intron |
| GTTTGTTTCCAAGGTTATGG+AGG | 0.585600 | 4_4:-69709668 | Msa0699120:CDS |
| CAACCTACATCCTATTATGT+GGG | 0.595003 | 4_4:+69709391 | Msa0699110:intron |
| GATTCCGACACAATGGCAGA+AGG | 0.597510 | 4_4:-69711190 | Msa0699120:CDS |
| ATGCCTACCAACTCAAGGAA+TGG | 0.597546 | 4_4:-69710503 | Msa0699120:CDS |
| CAAAGAAGAGAGCAATTGAA+GGG | 0.598165 | 4_4:-69710353 | Msa0699120:CDS |
| TAAGGACCTCATGGCTGCAG+AGG | 0.598266 | 4_4:-69709780 | Msa0699120:CDS |
| TGATTTCCTCTGCAGCCATG+AGG | 0.604351 | 4_4:+69709774 | Msa0699110:intron |
| AAGCTGAGGATCTAGGAAAG+TGG | 0.606657 | 4_4:+69710744 | Msa0699110:intron |
| GAACTTAACCATGTTGCAGG+TGG | 0.608004 | 4_4:-69709634 | Msa0699120:CDS |
| CACCTAATTTCCATTACTCG+AGG | 0.608360 | 4_4:-69710667 | Msa0699120:CDS |
| AGATTGAGGCAATTCTCTAA+GGG | 0.609395 | 4_4:+69710544 | Msa0699110:intron |
| AGTTGTCTGAGCCTATTGGA+AGG | 0.611422 | 4_4:+69710630 | Msa0699110:intron |
| ACAGGATGACAGAGCATCAG+TGG | 0.612086 | 4_4:-69709971 | Msa0699120:intron |
| CAACATGTCCACCTGCAACA+TGG | 0.612887 | 4_4:+69709626 | Msa0699110:intron |
| CATGTTGCAGGTGGACATGT+TGG | 0.614636 | 4_4:-69709625 | Msa0699120:CDS |
| TGCAAGTGCTATAGCAAACA+GGG | 0.617014 | 4_4:-69709451 | Msa0699120:CDS |
| ATAGCATGCCTACCAACTCA+AGG | 0.617097 | 4_4:-69710508 | Msa0699120:CDS |
| CTCGAGTAATGGAAATTAGG+TGG | 0.618444 | 4_4:+69710668 | Msa0699110:intron |
| TAAGAGAATTCCTCCACAGA+AGG | 0.619324 | 4_4:+69711070 | Msa0699110:intron |
| TGTGAGAATAGATGAAGCTG+AGG | 0.619586 | 4_4:+69710730 | Msa0699110:intron |
| AGATTTAGTACATCTGGTGA+AGG | 0.621346 | 4_4:+69710770 | Msa0699110:intron |
| AGGTGTATCAGAATTCGAGT+TGG | 0.627894 | 4_4:-69710898 | Msa0699120:CDS |
| AGGGAAGATACAAAATCTTG+AGG | 0.628748 | 4_4:-69710334 | Msa0699120:CDS |
| ATAGGCTCAGACAACTCAAG+TGG | 0.630249 | 4_4:-69710623 | Msa0699120:CDS |
| GATGACAGAGCATCAGTGGT+CGG | 0.636237 | 4_4:-69709967 | Msa0699120:CDS |
| GGGCCGGAAACTGTGCAGGA+AGG | 0.638113 | 4_4:+69710564 | Msa0699110:intron |
| AGTCCATATCCTGAGCACTA+GGG | 0.638599 | 4_4:+69710873 | Msa0699110:intron |
| GGGAGTGTCGGAATTCAACA+AGG | 0.647586 | 4_4:-69710435 | Msa0699120:CDS |
| TAGGCATGCTATAGACGTGA+GGG | 0.648613 | 4_4:+69710519 | Msa0699110:intron |
| AGCTACAGAACATTTGACAA+CGG | 0.658358 | 4_4:-69710381 | Msa0699120:CDS |
| GTAGGCATGCTATAGACGTG+AGG | 0.659082 | 4_4:+69710518 | Msa0699110:intron |
| TTGCTTTGATTCCGACACAA+TGG | 0.659636 | 4_4:-69711197 | Msa0699120:CDS |
| CATCTGGTGAAGGATAATGA+GGG | 0.694690 | 4_4:+69710780 | Msa0699110:intron |
| GAACTACTACTACAACAACA+TGG | 0.699767 | 4_4:-69710939 | Msa0699120:CDS |
| GAGGAAATCAAAAGACAGTG+AGG | 0.707672 | 4_4:-69709761 | Msa0699120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTATTGTTATTTACTT+TGG | + | chr4_4:69710350-69710369 | Msa0699110:intron | 10.0% |
| !!! | AATTTTATAAAGTATTTACT+TGG | + | chr4_4:69711081-69711100 | Msa0699110:intron | 10.0% |
| !!! | TTATTTATTGTTATTTACTT+TGG | + | chr4_4:69710350-69710369 | Msa0699110:intron | 10.0% |
| !!! | AATTTTATAAAGTATTTACT+TGG | + | chr4_4:69711081-69711100 | Msa0699110:intron | 10.0% |
| !! | TTCATAGATATAATTAGATA+TGG | + | chr4_4:69710392-69710411 | Msa0699110:intron | 15.0% |
| !!! | TTAAATCTTGAATTATTTTG+AGG | - | chr4_4:69710453-69710472 | Msa0699120:CDS | 15.0% |
| !! | GTTAAAAATGACATTATTAT+TGG | - | chr4_4:69710526-69710545 | Msa0699120:CDS | 15.0% |
| !! | TAGATTTATTACATTTGATT+TGG | - | chr4_4:69711107-69711126 | Msa0699120:CDS | 15.0% |
| !! | TTCATAGATATAATTAGATA+TGG | + | chr4_4:69710392-69710411 | Msa0699110:intron | 15.0% |
| !!! | TTAAATCTTGAATTATTTTG+AGG | - | chr4_4:69710453-69710472 | Msa0699120:CDS | 15.0% |
| !! | GTTAAAAATGACATTATTAT+TGG | - | chr4_4:69710526-69710545 | Msa0699120:CDS | 15.0% |
| !! | TAGATTTATTACATTTGATT+TGG | - | chr4_4:69711107-69711126 | Msa0699120:CDS | 15.0% |
| !!! | TTTATTGTTATTTACTTTGG+TGG | + | chr4_4:69710347-69710366 | Msa0699110:intron | 20.0% |
| !! | ACCATGATTTAAATGATTAA+CGG | - | chr4_4:69710629-69710648 | Msa0699120:CDS | 20.0% |
| !! | TTGGTTATATATTAACTATG+AGG | - | chr4_4:69711126-69711145 | Msa0699120:CDS | 20.0% |
| !!! | TTTATTGTTATTTACTTTGG+TGG | + | chr4_4:69710347-69710366 | Msa0699110:intron | 20.0% |
| !! | ACCATGATTTAAATGATTAA+CGG | - | chr4_4:69710629-69710648 | Msa0699120:CDS | 20.0% |
| !! | TTGGTTATATATTAACTATG+AGG | - | chr4_4:69711126-69711145 | Msa0699120:CDS | 20.0% |
| !! | AAAATCTTGGTTTGAACATA+GGG | - | chr4_4:69709678-69709697 | Msa0699120:CDS | 25.0% |
| ! | TATTTACTTTGGTGGAATTT+GGG | + | chr4_4:69710339-69710358 | Msa0699110:intron | 25.0% |
| ! | TTATTTACTTTGGTGGAATT+TGG | + | chr4_4:69710340-69710359 | Msa0699110:intron | 25.0% |
| ! | CCATGATTTAAATGATTAAC+GGG | - | chr4_4:69710630-69710649 | Msa0699120:CDS | 25.0% |
| !! | AAAATCTTGGTTTGAACATA+GGG | - | chr4_4:69709678-69709697 | Msa0699120:CDS | 25.0% |
| ! | TATTTACTTTGGTGGAATTT+GGG | + | chr4_4:69710339-69710358 | Msa0699110:intron | 25.0% |
| ! | TTATTTACTTTGGTGGAATT+TGG | + | chr4_4:69710340-69710359 | Msa0699110:intron | 25.0% |
| ! | CCATGATTTAAATGATTAAC+GGG | - | chr4_4:69710630-69710649 | Msa0699120:CDS | 25.0% |
| ! | ATAGCATTGAAGAGAATTTC+AGG | - | chr4_4:69709546-69709565 | Msa0699120:intron | 30.0% |
| AGTGAATCCATTTGTATAAG+TGG | + | chr4_4:69709633-69709652 | Msa0699110:intron | 30.0% | |
| AACATTGCACAACAAAATCT+TGG | - | chr4_4:69709665-69709684 | Msa0699120:CDS | 30.0% | |
| ! | CAAAATCTTGGTTTGAACAT+AGG | - | chr4_4:69709677-69709696 | Msa0699120:CDS | 30.0% |
| ! | CAACAACATGGATAACATTT+TGG | - | chr4_4:69709712-69709731 | Msa0699120:CDS | 30.0% |
| TTTGTTTATGGTTGTGTAGT+TGG | + | chr4_4:69709814-69709833 | Msa0699110:intron | 30.0% | |
| ATCTAATGACAAAAGCAAAG+TGG | + | chr4_4:69710426-69710445 | Msa0699110:intron | 30.0% | |
| ! | TTGTTATGTCACTTGTAGTT+TGG | - | chr4_4:69710504-69710523 | Msa0699120:CDS | 30.0% |
| CCCGTTAATCATTTAAATCA+TGG | + | chr4_4:69710633-69710652 | Msa0699110:intron | 30.0% | |
| ! | ATAGCATTGAAGAGAATTTC+AGG | - | chr4_4:69709546-69709565 | Msa0699120:intron | 30.0% |
| AGTGAATCCATTTGTATAAG+TGG | + | chr4_4:69709633-69709652 | Msa0699110:intron | 30.0% | |
| AACATTGCACAACAAAATCT+TGG | - | chr4_4:69709665-69709684 | Msa0699120:CDS | 30.0% | |
| ! | CAAAATCTTGGTTTGAACAT+AGG | - | chr4_4:69709677-69709696 | Msa0699120:CDS | 30.0% |
| ! | CAACAACATGGATAACATTT+TGG | - | chr4_4:69709712-69709731 | Msa0699120:CDS | 30.0% |
| TTTGTTTATGGTTGTGTAGT+TGG | + | chr4_4:69709814-69709833 | Msa0699110:intron | 30.0% | |
| ATCTAATGACAAAAGCAAAG+TGG | + | chr4_4:69710426-69710445 | Msa0699110:intron | 30.0% | |
| ! | TTGTTATGTCACTTGTAGTT+TGG | - | chr4_4:69710504-69710523 | Msa0699120:CDS | 30.0% |
| CCCGTTAATCATTTAAATCA+TGG | + | chr4_4:69710633-69710652 | Msa0699110:intron | 30.0% | |
| !! | CAGTTTGCTCATGCATATTT+TGG | + | chr4_4:69709421-69709440 | Msa0699110:intron | 35.0% |
| CAAAATATGCATGAGCAAAC+TGG | - | chr4_4:69709419-69709438 | Msa0699120:CDS | 35.0% | |
| GATGTCTCCACTTATACAAA+TGG | - | chr4_4:69709623-69709642 | Msa0699120:CDS | 35.0% | |
| ! | TGTGCAATGTTTTCTGATGA+GGG | + | chr4_4:69709656-69709675 | Msa0699110:intron | 35.0% |
| ! | TTGTGCAATGTTTTCTGATG+AGG | + | chr4_4:69709657-69709676 | Msa0699110:intron | 35.0% |
| GAACTACTACTACAACAACA+TGG | - | chr4_4:69709700-69709719 | Msa0699120:CDS | 35.0% | |
| !! | AGGGATTGTAGCTTTGTTTA+TGG | + | chr4_4:69709826-69709845 | Msa0699110:intron | 35.0% |
| AGATTTAGTACATCTGGTGA+AGG | + | chr4_4:69709872-69709891 | Msa0699110:intron | 35.0% | |
| TGGTGAAGATTTAGTACATC+TGG | + | chr4_4:69709878-69709897 | Msa0699110:intron | 35.0% | |
| !!! | AATTAGGTGGCTTTTGAGTT+GGG | + | chr4_4:69709961-69709980 | Msa0699110:intron | 35.0% |
| !! | AAATTAGGTGGCTTTTGAGT+TGG | + | chr4_4:69709962-69709981 | Msa0699110:intron | 35.0% |
| AGATTGAGGCAATTCTCTAA+GGG | + | chr4_4:69710098-69710117 | Msa0699110:intron | 35.0% | |
| AGCTACAGAACATTTGACAA+CGG | - | chr4_4:69710258-69710277 | Msa0699120:intron | 35.0% | |
| ACAAAGAAGAGAGCAATTGA+AGG | - | chr4_4:69710285-69710304 | Msa0699120:intron | 35.0% | |
| CAAAGAAGAGAGCAATTGAA+GGG | - | chr4_4:69710286-69710305 | Msa0699120:intron | 35.0% | |
| AGGGAAGATACAAAATCTTG+AGG | - | chr4_4:69710305-69710324 | Msa0699120:intron | 35.0% | |
| AGTGAATGAGCTGAAACTAT+TGG | - | chr4_4:69710731-69710750 | Msa0699120:CDS | 35.0% | |
| CAAACTGTTTCAGAGAAAGA+AGG | - | chr4_4:69710935-69710954 | Msa0699120:CDS | 35.0% | |
| TAGTTTCCTGTTCAATAGCA+AGG | - | chr4_4:69711046-69711065 | Msa0699120:CDS | 35.0% | |
| !! | TATCAACCTTGCTATTGAAC+AGG | + | chr4_4:69711055-69711074 | Msa0699110:intron | 35.0% |
| !! | CAGTTTGCTCATGCATATTT+TGG | + | chr4_4:69709421-69709440 | Msa0699110:intron | 35.0% |
| CAAAATATGCATGAGCAAAC+TGG | - | chr4_4:69709419-69709438 | Msa0699120:CDS | 35.0% | |
| GATGTCTCCACTTATACAAA+TGG | - | chr4_4:69709623-69709642 | Msa0699120:CDS | 35.0% | |
| ! | TGTGCAATGTTTTCTGATGA+GGG | + | chr4_4:69709656-69709675 | Msa0699110:intron | 35.0% |
| ! | TTGTGCAATGTTTTCTGATG+AGG | + | chr4_4:69709657-69709676 | Msa0699110:intron | 35.0% |
| GAACTACTACTACAACAACA+TGG | - | chr4_4:69709700-69709719 | Msa0699120:CDS | 35.0% | |
| !! | AGGGATTGTAGCTTTGTTTA+TGG | + | chr4_4:69709826-69709845 | Msa0699110:intron | 35.0% |
| AGATTTAGTACATCTGGTGA+AGG | + | chr4_4:69709872-69709891 | Msa0699110:intron | 35.0% | |
| TGGTGAAGATTTAGTACATC+TGG | + | chr4_4:69709878-69709897 | Msa0699110:intron | 35.0% | |
| !!! | AATTAGGTGGCTTTTGAGTT+GGG | + | chr4_4:69709961-69709980 | Msa0699110:intron | 35.0% |
| !! | AAATTAGGTGGCTTTTGAGT+TGG | + | chr4_4:69709962-69709981 | Msa0699110:intron | 35.0% |
| AGATTGAGGCAATTCTCTAA+GGG | + | chr4_4:69710098-69710117 | Msa0699110:intron | 35.0% | |
| AGCTACAGAACATTTGACAA+CGG | - | chr4_4:69710258-69710277 | Msa0699120:intron | 35.0% | |
| ACAAAGAAGAGAGCAATTGA+AGG | - | chr4_4:69710285-69710304 | Msa0699120:intron | 35.0% | |
| CAAAGAAGAGAGCAATTGAA+GGG | - | chr4_4:69710286-69710305 | Msa0699120:intron | 35.0% | |
| AGGGAAGATACAAAATCTTG+AGG | - | chr4_4:69710305-69710324 | Msa0699120:intron | 35.0% | |
| AGTGAATGAGCTGAAACTAT+TGG | - | chr4_4:69710731-69710750 | Msa0699120:CDS | 35.0% | |
| CAAACTGTTTCAGAGAAAGA+AGG | - | chr4_4:69710935-69710954 | Msa0699120:CDS | 35.0% | |
| TAGTTTCCTGTTCAATAGCA+AGG | - | chr4_4:69711046-69711065 | Msa0699120:CDS | 35.0% | |
| !! | TATCAACCTTGCTATTGAAC+AGG | + | chr4_4:69711055-69711074 | Msa0699110:intron | 35.0% |
| TTGCTTTGATTCCGACACAA+TGG | - | chr4_4:69709442-69709461 | Msa0699120:CDS | 40.0% | |
| TGGGGAGAGTTATTATCTTC+TGG | + | chr4_4:69709488-69709507 | Msa0699110:intron | 40.0% | |
| !! | ACTTGATTTGGCATGGTTTG+GGG | + | chr4_4:69709506-69709525 | Msa0699110:intron | 40.0% |
| !! | CACTTGATTTGGCATGGTTT+GGG | + | chr4_4:69709507-69709526 | Msa0699110:intron | 40.0% |
| TTACCTGCAACCACTTGATT+TGG | + | chr4_4:69709518-69709537 | Msa0699110:intron | 40.0% | |
| TAAGAGAATTCCTCCACAGA+AGG | + | chr4_4:69709572-69709591 | Msa0699110:intron | 40.0% | |
| TATAAGTGGAGACATCTTCC+AGG | + | chr4_4:69709619-69709638 | Msa0699110:intron | 40.0% | |
| !!! | GGATAACATTTTGGAGCAAG+AGG | - | chr4_4:69709721-69709740 | Msa0699120:CDS | 40.0% |
| AGGTGTATCAGAATTCGAGT+TGG | - | chr4_4:69709741-69709760 | Msa0699120:CDS | 40.0% | |
| ! | GGTGTATCAGAATTCGAGTT+GGG | - | chr4_4:69709742-69709761 | Msa0699120:CDS | 40.0% |
| ! | TTGGTGGTATTCTTGGTGAT+TGG | + | chr4_4:69709795-69709814 | Msa0699110:intron | 40.0% |
| !! | TGTGTAGTTGGTGGTATTCT+TGG | + | chr4_4:69709802-69709821 | Msa0699110:intron | 40.0% |
| GTTTATGGTTGTGTAGTTGG+TGG | + | chr4_4:69709811-69709830 | Msa0699110:intron | 40.0% | |
| AGGATAATGAGGGTCTTGAA+TGG | + | chr4_4:69709852-69709871 | Msa0699110:intron | 40.0% | |
| CATCTGGTGAAGGATAATGA+GGG | + | chr4_4:69709862-69709881 | Msa0699110:intron | 40.0% | |
| ACATCTGGTGAAGGATAATG+AGG | + | chr4_4:69709863-69709882 | Msa0699110:intron | 40.0% | |
| ATAGATGAAGCTGAGGATCT+AGG | + | chr4_4:69709905-69709924 | Msa0699110:intron | 40.0% | |
| TGTGAGAATAGATGAAGCTG+AGG | + | chr4_4:69709912-69709931 | Msa0699110:intron | 40.0% | |
| ! | TTTGTGATGCAAATGGTGGA+TGG | + | chr4_4:69709938-69709957 | Msa0699110:intron | 40.0% |
| AGTTGGGTTTGTGATGCAAA+TGG | + | chr4_4:69709945-69709964 | Msa0699110:intron | 40.0% | |
| ! | CTCGAGTAATGGAAATTAGG+TGG | + | chr4_4:69709974-69709993 | Msa0699110:intron | 40.0% |
| CACCTAATTTCCATTACTCG+AGG | - | chr4_4:69709972-69709991 | Msa0699120:intron | 40.0% | |
| ! | CTCCTCGAGTAATGGAAATT+AGG | + | chr4_4:69709977-69709996 | Msa0699110:intron | 40.0% |
| CAAGAAAACTCCTCGAGTAA+TGG | + | chr4_4:69709985-69710004 | Msa0699110:intron | 40.0% | |
| ! | CATTACTCGAGGAGTTTTCT+TGG | - | chr4_4:69709983-69710002 | Msa0699120:intron | 40.0% |
| TTTCTTGGAGACCTTCCAAT+AGG | - | chr4_4:69709998-69710017 | Msa0699120:intron | 40.0% | |
| GGAAGGTTCATAGGAAATAG+AGG | + | chr4_4:69710061-69710080 | Msa0699110:intron | 40.0% | |
| GAGATTGAGGCAATTCTCTA+AGG | + | chr4_4:69710099-69710118 | Msa0699110:intron | 40.0% | |
| ! | TCAAGGAATGGTTCTCGTTT+TGG | - | chr4_4:69710148-69710167 | Msa0699120:intron | 40.0% |
| !! | AACAAGGTCACTGCTTTTGT+TGG | - | chr4_4:69710220-69710239 | Msa0699120:intron | 40.0% |
| ! | GCTTTTGTTGGCAAAGGAAA+AGG | - | chr4_4:69710232-69710251 | Msa0699120:intron | 40.0% |
| !! | GGGCAGTTTTGATCTAATAC+AGG | - | chr4_4:69710650-69710669 | Msa0699120:CDS | 40.0% |
| GAATGAGCTGAAACTATTGG+AGG | - | chr4_4:69710734-69710753 | Msa0699120:CDS | 40.0% | |
| GAGGAAATCAAAAGACAGTG+AGG | - | chr4_4:69710878-69710897 | Msa0699120:CDS | 40.0% | |
| !! | AAGACAGTGAGGTTGATGTT+CGG | - | chr4_4:69710889-69710908 | Msa0699120:CDS | 40.0% |
| !! | TTGCTTGCTGTTTGTTTCCA+AGG | - | chr4_4:69710962-69710981 | Msa0699120:CDS | 40.0% |
| GCTGTTTGTTTCCAAGGTTA+TGG | - | chr4_4:69710968-69710987 | Msa0699120:CDS | 40.0% | |
| GTTTGTTTCCAAGGTTATGG+AGG | - | chr4_4:69710971-69710990 | Msa0699120:CDS | 40.0% | |
| TTGGAACTTAACCATGTTGC+AGG | - | chr4_4:69711002-69711021 | Msa0699120:CDS | 40.0% | |
| ! | ATGAGGTGTTTCACTTATGC+AGG | - | chr4_4:69711143-69711162 | Msa0699120:CDS | 40.0% |
| TCACTTATGCAGGTAACTGA+AGG | - | chr4_4:69711153-69711172 | Msa0699120:CDS | 40.0% | |
| ATGCAAGTGCTATAGCAAAC+AGG | - | chr4_4:69711187-69711206 | Msa0699120:CDS | 40.0% | |
| TGCAAGTGCTATAGCAAACA+GGG | - | chr4_4:69711188-69711207 | Msa0699120:CDS | 40.0% | |
| AAACAGGGTGATTGATGTTC+TGG | - | chr4_4:69711203-69711222 | Msa0699120:CDS | 40.0% | |
| TTGCTTTGATTCCGACACAA+TGG | - | chr4_4:69709442-69709461 | Msa0699120:CDS | 40.0% | |
| TGGGGAGAGTTATTATCTTC+TGG | + | chr4_4:69709488-69709507 | Msa0699110:intron | 40.0% | |
| !! | ACTTGATTTGGCATGGTTTG+GGG | + | chr4_4:69709506-69709525 | Msa0699110:intron | 40.0% |
| !! | CACTTGATTTGGCATGGTTT+GGG | + | chr4_4:69709507-69709526 | Msa0699110:intron | 40.0% |
| TTACCTGCAACCACTTGATT+TGG | + | chr4_4:69709518-69709537 | Msa0699110:intron | 40.0% | |
| TAAGAGAATTCCTCCACAGA+AGG | + | chr4_4:69709572-69709591 | Msa0699110:intron | 40.0% | |
| TATAAGTGGAGACATCTTCC+AGG | + | chr4_4:69709619-69709638 | Msa0699110:intron | 40.0% | |
| !!! | GGATAACATTTTGGAGCAAG+AGG | - | chr4_4:69709721-69709740 | Msa0699120:CDS | 40.0% |
| AGGTGTATCAGAATTCGAGT+TGG | - | chr4_4:69709741-69709760 | Msa0699120:CDS | 40.0% | |
| ! | GGTGTATCAGAATTCGAGTT+GGG | - | chr4_4:69709742-69709761 | Msa0699120:CDS | 40.0% |
| ! | TTGGTGGTATTCTTGGTGAT+TGG | + | chr4_4:69709795-69709814 | Msa0699110:intron | 40.0% |
| !! | TGTGTAGTTGGTGGTATTCT+TGG | + | chr4_4:69709802-69709821 | Msa0699110:intron | 40.0% |
| GTTTATGGTTGTGTAGTTGG+TGG | + | chr4_4:69709811-69709830 | Msa0699110:intron | 40.0% | |
| AGGATAATGAGGGTCTTGAA+TGG | + | chr4_4:69709852-69709871 | Msa0699110:intron | 40.0% | |
| CATCTGGTGAAGGATAATGA+GGG | + | chr4_4:69709862-69709881 | Msa0699110:intron | 40.0% | |
| ACATCTGGTGAAGGATAATG+AGG | + | chr4_4:69709863-69709882 | Msa0699110:intron | 40.0% | |
| ATAGATGAAGCTGAGGATCT+AGG | + | chr4_4:69709905-69709924 | Msa0699110:intron | 40.0% | |
| TGTGAGAATAGATGAAGCTG+AGG | + | chr4_4:69709912-69709931 | Msa0699110:intron | 40.0% | |
| ! | TTTGTGATGCAAATGGTGGA+TGG | + | chr4_4:69709938-69709957 | Msa0699110:intron | 40.0% |
| AGTTGGGTTTGTGATGCAAA+TGG | + | chr4_4:69709945-69709964 | Msa0699110:intron | 40.0% | |
| ! | CTCGAGTAATGGAAATTAGG+TGG | + | chr4_4:69709974-69709993 | Msa0699110:intron | 40.0% |
| CACCTAATTTCCATTACTCG+AGG | - | chr4_4:69709972-69709991 | Msa0699120:intron | 40.0% | |
| ! | CTCCTCGAGTAATGGAAATT+AGG | + | chr4_4:69709977-69709996 | Msa0699110:intron | 40.0% |
| CAAGAAAACTCCTCGAGTAA+TGG | + | chr4_4:69709985-69710004 | Msa0699110:intron | 40.0% | |
| ! | CATTACTCGAGGAGTTTTCT+TGG | - | chr4_4:69709983-69710002 | Msa0699120:intron | 40.0% |
| TTTCTTGGAGACCTTCCAAT+AGG | - | chr4_4:69709998-69710017 | Msa0699120:intron | 40.0% | |
| GGAAGGTTCATAGGAAATAG+AGG | + | chr4_4:69710061-69710080 | Msa0699110:intron | 40.0% | |
| GAGATTGAGGCAATTCTCTA+AGG | + | chr4_4:69710099-69710118 | Msa0699110:intron | 40.0% | |
| ! | TCAAGGAATGGTTCTCGTTT+TGG | - | chr4_4:69710148-69710167 | Msa0699120:intron | 40.0% |
| !! | AACAAGGTCACTGCTTTTGT+TGG | - | chr4_4:69710220-69710239 | Msa0699120:intron | 40.0% |
| ! | GCTTTTGTTGGCAAAGGAAA+AGG | - | chr4_4:69710232-69710251 | Msa0699120:intron | 40.0% |
| !! | GGGCAGTTTTGATCTAATAC+AGG | - | chr4_4:69710650-69710669 | Msa0699120:CDS | 40.0% |
| GAATGAGCTGAAACTATTGG+AGG | - | chr4_4:69710734-69710753 | Msa0699120:CDS | 40.0% | |
| GAGGAAATCAAAAGACAGTG+AGG | - | chr4_4:69710878-69710897 | Msa0699120:CDS | 40.0% | |
| !! | AAGACAGTGAGGTTGATGTT+CGG | - | chr4_4:69710889-69710908 | Msa0699120:CDS | 40.0% |
| !! | TTGCTTGCTGTTTGTTTCCA+AGG | - | chr4_4:69710962-69710981 | Msa0699120:CDS | 40.0% |
| GCTGTTTGTTTCCAAGGTTA+TGG | - | chr4_4:69710968-69710987 | Msa0699120:CDS | 40.0% | |
| GTTTGTTTCCAAGGTTATGG+AGG | - | chr4_4:69710971-69710990 | Msa0699120:CDS | 40.0% | |
| TTGGAACTTAACCATGTTGC+AGG | - | chr4_4:69711002-69711021 | Msa0699120:CDS | 40.0% | |
| ! | ATGAGGTGTTTCACTTATGC+AGG | - | chr4_4:69711143-69711162 | Msa0699120:CDS | 40.0% |
| TCACTTATGCAGGTAACTGA+AGG | - | chr4_4:69711153-69711172 | Msa0699120:CDS | 40.0% | |
| ATGCAAGTGCTATAGCAAAC+AGG | - | chr4_4:69711187-69711206 | Msa0699120:CDS | 40.0% | |
| TGCAAGTGCTATAGCAAACA+GGG | - | chr4_4:69711188-69711207 | Msa0699120:CDS | 40.0% | |
| AAACAGGGTGATTGATGTTC+TGG | - | chr4_4:69711203-69711222 | Msa0699120:CDS | 40.0% | |
| AACACCTTCTGCCATTGTGT+CGG | + | chr4_4:69709456-69709475 | Msa0699110:intron | 45.0% | |
| !! | CCACTTGATTTGGCATGGTT+TGG | + | chr4_4:69709508-69709527 | Msa0699110:intron | 45.0% |
| CCAAACCATGCCAAATCAAG+TGG | - | chr4_4:69709505-69709524 | Msa0699120:intron | 45.0% | |
| !! | TGCAACCACTTGATTTGGCA+TGG | + | chr4_4:69709513-69709532 | Msa0699110:intron | 45.0% |
| ATGCCAAATCAAGTGGTTGC+AGG | - | chr4_4:69709512-69709531 | Msa0699120:intron | 45.0% | |
| AGAGAATTTCAGGCCTTCTG+TGG | - | chr4_4:69709556-69709575 | Msa0699120:intron | 45.0% | |
| ! | AGACATCTTCCAGGTGTTGT+GGG | + | chr4_4:69709610-69709629 | Msa0699110:intron | 45.0% |
| AGTCCATATCCTGAGCACTA+GGG | + | chr4_4:69709769-69709788 | Msa0699110:intron | 45.0% | |
| TAGTCCATATCCTGAGCACT+AGG | + | chr4_4:69709770-69709789 | Msa0699110:intron | 45.0% | |
| TGAGGGTCTTGAATGGTTGA+GGG | + | chr4_4:69709845-69709864 | Msa0699110:intron | 45.0% | |
| ATGAGGGTCTTGAATGGTTG+AGG | + | chr4_4:69709846-69709865 | Msa0699110:intron | 45.0% | |
| AAGCTGAGGATCTAGGAAAG+TGG | + | chr4_4:69709898-69709917 | Msa0699110:intron | 45.0% | |
| TGGGTTTGTGATGCAAATGG+TGG | + | chr4_4:69709942-69709961 | Msa0699110:intron | 45.0% | |
| AGTTGTCTGAGCCTATTGGA+AGG | + | chr4_4:69710012-69710031 | Msa0699110:intron | 45.0% | |
| ! | CTTGAGTTGTCTGAGCCTAT+TGG | + | chr4_4:69710016-69710035 | Msa0699110:intron | 45.0% |
| ATAGGCTCAGACAACTCAAG+TGG | - | chr4_4:69710016-69710035 | Msa0699120:intron | 45.0% | |
| AACTGTGCAGGAAGGTTCAT+AGG | + | chr4_4:69710070-69710089 | Msa0699110:intron | 45.0% | |
| TAGGCATGCTATAGACGTGA+GGG | + | chr4_4:69710123-69710142 | Msa0699110:intron | 45.0% | |
| ATAGCATGCCTACCAACTCA+AGG | - | chr4_4:69710131-69710150 | Msa0699120:intron | 45.0% | |
| ATGCCTACCAACTCAAGGAA+TGG | - | chr4_4:69710136-69710155 | Msa0699120:intron | 45.0% | |
| !! | GAACCATTCCTTGAGTTGGT+AGG | + | chr4_4:69710142-69710161 | Msa0699110:intron | 45.0% |
| ACGAGAACCATTCCTTGAGT+TGG | + | chr4_4:69710146-69710165 | Msa0699110:intron | 45.0% | |
| ! | AGGAATGGTTCTCGTTTTGG+TGG | - | chr4_4:69710151-69710170 | Msa0699120:intron | 45.0% |
| !! | AATGGTTCTCGTTTTGGTGG+AGG | - | chr4_4:69710154-69710173 | Msa0699120:intron | 45.0% |
| !! | ATGGTTCTCGTTTTGGTGGA+GGG | - | chr4_4:69710155-69710174 | Msa0699120:intron | 45.0% |
| !! | GTCACTGCTTTTGTTGGCAA+AGG | - | chr4_4:69710226-69710245 | Msa0699120:intron | 45.0% |
| GGAGAAGAAAAGACACGAGA+TGG | - | chr4_4:69710755-69710774 | Msa0699120:CDS | 45.0% | |
| ! | AGCTGTCACATGAAGCCTTT+TGG | - | chr4_4:69710819-69710838 | Msa0699120:CDS | 45.0% |
| !! | AAGCCTTTTGGTGATCCAGA+TGG | - | chr4_4:69710831-69710850 | Msa0699120:CDS | 45.0% |
| CTTCCATCTGGATCACCAAA+AGG | + | chr4_4:69710837-69710856 | Msa0699110:intron | 45.0% | |
| ! | GTGATCCAGATGGAAGCATA+AGG | - | chr4_4:69710841-69710860 | Msa0699120:CDS | 45.0% |
| ! | ATGGAAGCATAAGGACCTCA+TGG | - | chr4_4:69710850-69710869 | Msa0699120:CDS | 45.0% |
| CTGAAGTTCCTCCATAACCT+TGG | + | chr4_4:69710982-69711001 | Msa0699110:intron | 45.0% | |
| GGTTATGGAGGAACTTCAGT+TGG | - | chr4_4:69710983-69711002 | Msa0699120:CDS | 45.0% | |
| GAACTTAACCATGTTGCAGG+TGG | - | chr4_4:69711005-69711024 | Msa0699120:CDS | 45.0% | |
| CAGCAGTTGTCCCACATAAT+AGG | - | chr4_4:69711238-69711257 | Msa0699120:CDS | 45.0% | |
| AACACCTTCTGCCATTGTGT+CGG | + | chr4_4:69709456-69709475 | Msa0699110:intron | 45.0% | |
| !! | CCACTTGATTTGGCATGGTT+TGG | + | chr4_4:69709508-69709527 | Msa0699110:intron | 45.0% |
| CCAAACCATGCCAAATCAAG+TGG | - | chr4_4:69709505-69709524 | Msa0699120:intron | 45.0% | |
| !! | TGCAACCACTTGATTTGGCA+TGG | + | chr4_4:69709513-69709532 | Msa0699110:intron | 45.0% |
| ATGCCAAATCAAGTGGTTGC+AGG | - | chr4_4:69709512-69709531 | Msa0699120:intron | 45.0% | |
| AGAGAATTTCAGGCCTTCTG+TGG | - | chr4_4:69709556-69709575 | Msa0699120:intron | 45.0% | |
| ! | AGACATCTTCCAGGTGTTGT+GGG | + | chr4_4:69709610-69709629 | Msa0699110:intron | 45.0% |
| AGTCCATATCCTGAGCACTA+GGG | + | chr4_4:69709769-69709788 | Msa0699110:intron | 45.0% | |
| TAGTCCATATCCTGAGCACT+AGG | + | chr4_4:69709770-69709789 | Msa0699110:intron | 45.0% | |
| TGAGGGTCTTGAATGGTTGA+GGG | + | chr4_4:69709845-69709864 | Msa0699110:intron | 45.0% | |
| ATGAGGGTCTTGAATGGTTG+AGG | + | chr4_4:69709846-69709865 | Msa0699110:intron | 45.0% | |
| AAGCTGAGGATCTAGGAAAG+TGG | + | chr4_4:69709898-69709917 | Msa0699110:intron | 45.0% | |
| TGGGTTTGTGATGCAAATGG+TGG | + | chr4_4:69709942-69709961 | Msa0699110:intron | 45.0% | |
| AGTTGTCTGAGCCTATTGGA+AGG | + | chr4_4:69710012-69710031 | Msa0699110:intron | 45.0% | |
| ! | CTTGAGTTGTCTGAGCCTAT+TGG | + | chr4_4:69710016-69710035 | Msa0699110:intron | 45.0% |
| ATAGGCTCAGACAACTCAAG+TGG | - | chr4_4:69710016-69710035 | Msa0699120:intron | 45.0% | |
| AACTGTGCAGGAAGGTTCAT+AGG | + | chr4_4:69710070-69710089 | Msa0699110:intron | 45.0% | |
| TAGGCATGCTATAGACGTGA+GGG | + | chr4_4:69710123-69710142 | Msa0699110:intron | 45.0% | |
| ATAGCATGCCTACCAACTCA+AGG | - | chr4_4:69710131-69710150 | Msa0699120:intron | 45.0% | |
| ATGCCTACCAACTCAAGGAA+TGG | - | chr4_4:69710136-69710155 | Msa0699120:intron | 45.0% | |
| !! | GAACCATTCCTTGAGTTGGT+AGG | + | chr4_4:69710142-69710161 | Msa0699110:intron | 45.0% |
| ACGAGAACCATTCCTTGAGT+TGG | + | chr4_4:69710146-69710165 | Msa0699110:intron | 45.0% | |
| ! | AGGAATGGTTCTCGTTTTGG+TGG | - | chr4_4:69710151-69710170 | Msa0699120:intron | 45.0% |
| !! | AATGGTTCTCGTTTTGGTGG+AGG | - | chr4_4:69710154-69710173 | Msa0699120:intron | 45.0% |
| !! | ATGGTTCTCGTTTTGGTGGA+GGG | - | chr4_4:69710155-69710174 | Msa0699120:intron | 45.0% |
| !! | GTCACTGCTTTTGTTGGCAA+AGG | - | chr4_4:69710226-69710245 | Msa0699120:intron | 45.0% |
| GGAGAAGAAAAGACACGAGA+TGG | - | chr4_4:69710755-69710774 | Msa0699120:CDS | 45.0% | |
| ! | AGCTGTCACATGAAGCCTTT+TGG | - | chr4_4:69710819-69710838 | Msa0699120:CDS | 45.0% |
| !! | AAGCCTTTTGGTGATCCAGA+TGG | - | chr4_4:69710831-69710850 | Msa0699120:CDS | 45.0% |
| CTTCCATCTGGATCACCAAA+AGG | + | chr4_4:69710837-69710856 | Msa0699110:intron | 45.0% | |
| ! | GTGATCCAGATGGAAGCATA+AGG | - | chr4_4:69710841-69710860 | Msa0699120:CDS | 45.0% |
| ! | ATGGAAGCATAAGGACCTCA+TGG | - | chr4_4:69710850-69710869 | Msa0699120:CDS | 45.0% |
| CTGAAGTTCCTCCATAACCT+TGG | + | chr4_4:69710982-69711001 | Msa0699110:intron | 45.0% | |
| GGTTATGGAGGAACTTCAGT+TGG | - | chr4_4:69710983-69711002 | Msa0699120:CDS | 45.0% | |
| GAACTTAACCATGTTGCAGG+TGG | - | chr4_4:69711005-69711024 | Msa0699120:CDS | 45.0% | |
| CAGCAGTTGTCCCACATAAT+AGG | - | chr4_4:69711238-69711257 | Msa0699120:CDS | 45.0% | |
| GATTCCGACACAATGGCAGA+AGG | - | chr4_4:69709449-69709468 | Msa0699120:CDS | 50.0% | |
| GAATTTCAGGCCTTCTGTGG+AGG | - | chr4_4:69709559-69709578 | Msa0699120:intron | 50.0% | |
| TCATCACAACCCACAACACC+TGG | - | chr4_4:69709598-69709617 | Msa0699120:CDS | 50.0% | |
| ! | GAGACATCTTCCAGGTGTTG+TGG | + | chr4_4:69709611-69709630 | Msa0699110:intron | 50.0% |
| GAACCTTCCTGCACAGTTTC+CGG | - | chr4_4:69710072-69710091 | Msa0699120:intron | 50.0% | |
| ! | TGAGGCAATTCTCTAAGGGC+CGG | + | chr4_4:69710094-69710113 | Msa0699110:intron | 50.0% |
| TAGACGTGAGGGAGAGATTG+AGG | + | chr4_4:69710112-69710131 | Msa0699110:intron | 50.0% | |
| GTAGGCATGCTATAGACGTG+AGG | + | chr4_4:69710124-69710143 | Msa0699110:intron | 50.0% | |
| !! | TGGTTCTCGTTTTGGTGGAG+GGG | - | chr4_4:69710156-69710175 | Msa0699120:intron | 50.0% |
| ! | TTTTGGTGGAGGGGATGAGA+TGG | - | chr4_4:69710165-69710184 | Msa0699120:intron | 50.0% |
| ! | ATGGAGGGAGATGGAGGTAT+GGG | - | chr4_4:69710184-69710203 | Msa0699120:intron | 50.0% |
| ! | AGATGGAGGTATGGGAGTGT+CGG | - | chr4_4:69710192-69710211 | Msa0699120:intron | 50.0% |
| !! | GGGAGTGTCGGAATTCAACA+AGG | - | chr4_4:69710204-69710223 | Msa0699120:intron | 50.0% |
| ! | ACAGGATGACAGAGCATCAG+TGG | - | chr4_4:69710668-69710687 | Msa0699120:CDS | 50.0% |
| ! | GATGACAGAGCATCAGTGGT+CGG | - | chr4_4:69710672-69710691 | Msa0699120:CDS | 50.0% |
| GAGGTCCTTATGCTTCCATC+TGG | + | chr4_4:69710849-69710868 | Msa0699110:intron | 50.0% | |
| TGATTTCCTCTGCAGCCATG+AGG | + | chr4_4:69710868-69710887 | Msa0699110:intron | 50.0% | |
| CAACATGTCCACCTGCAACA+TGG | + | chr4_4:69711016-69711035 | Msa0699110:intron | 50.0% | |
| CATGTTGCAGGTGGACATGT+TGG | - | chr4_4:69711014-69711033 | Msa0699120:CDS | 50.0% | |
| GATTCCGACACAATGGCAGA+AGG | - | chr4_4:69709449-69709468 | Msa0699120:CDS | 50.0% | |
| GAATTTCAGGCCTTCTGTGG+AGG | - | chr4_4:69709559-69709578 | Msa0699120:intron | 50.0% | |
| TCATCACAACCCACAACACC+TGG | - | chr4_4:69709598-69709617 | Msa0699120:CDS | 50.0% | |
| ! | GAGACATCTTCCAGGTGTTG+TGG | + | chr4_4:69709611-69709630 | Msa0699110:intron | 50.0% |
| GAACCTTCCTGCACAGTTTC+CGG | - | chr4_4:69710072-69710091 | Msa0699120:intron | 50.0% | |
| ! | TGAGGCAATTCTCTAAGGGC+CGG | + | chr4_4:69710094-69710113 | Msa0699110:intron | 50.0% |
| TAGACGTGAGGGAGAGATTG+AGG | + | chr4_4:69710112-69710131 | Msa0699110:intron | 50.0% | |
| GTAGGCATGCTATAGACGTG+AGG | + | chr4_4:69710124-69710143 | Msa0699110:intron | 50.0% | |
| !! | TGGTTCTCGTTTTGGTGGAG+GGG | - | chr4_4:69710156-69710175 | Msa0699120:intron | 50.0% |
| ! | TTTTGGTGGAGGGGATGAGA+TGG | - | chr4_4:69710165-69710184 | Msa0699120:intron | 50.0% |
| ! | ATGGAGGGAGATGGAGGTAT+GGG | - | chr4_4:69710184-69710203 | Msa0699120:intron | 50.0% |
| ! | AGATGGAGGTATGGGAGTGT+CGG | - | chr4_4:69710192-69710211 | Msa0699120:intron | 50.0% |
| !! | GGGAGTGTCGGAATTCAACA+AGG | - | chr4_4:69710204-69710223 | Msa0699120:intron | 50.0% |
| ! | ACAGGATGACAGAGCATCAG+TGG | - | chr4_4:69710668-69710687 | Msa0699120:CDS | 50.0% |
| ! | GATGACAGAGCATCAGTGGT+CGG | - | chr4_4:69710672-69710691 | Msa0699120:CDS | 50.0% |
| GAGGTCCTTATGCTTCCATC+TGG | + | chr4_4:69710849-69710868 | Msa0699110:intron | 50.0% | |
| TGATTTCCTCTGCAGCCATG+AGG | + | chr4_4:69710868-69710887 | Msa0699110:intron | 50.0% | |
| CAACATGTCCACCTGCAACA+TGG | + | chr4_4:69711016-69711035 | Msa0699110:intron | 50.0% | |
| CATGTTGCAGGTGGACATGT+TGG | - | chr4_4:69711014-69711033 | Msa0699120:CDS | 50.0% | |
| GGACCCTAGTGCTCAGGATA+TGG | - | chr4_4:69709763-69709782 | Msa0699120:CDS | 55.0% | |
| GATGAGATGGAGGGAGATGG+AGG | - | chr4_4:69710178-69710197 | Msa0699120:intron | 55.0% | |
| GATGGAGGGAGATGGAGGTA+TGG | - | chr4_4:69710183-69710202 | Msa0699120:intron | 55.0% | |
| TAAGGACCTCATGGCTGCAG+AGG | - | chr4_4:69710859-69710878 | Msa0699120:CDS | 55.0% | |
| GGACCCTAGTGCTCAGGATA+TGG | - | chr4_4:69709763-69709782 | Msa0699120:CDS | 55.0% | |
| GATGAGATGGAGGGAGATGG+AGG | - | chr4_4:69710178-69710197 | Msa0699120:intron | 55.0% | |
| GATGGAGGGAGATGGAGGTA+TGG | - | chr4_4:69710183-69710202 | Msa0699120:intron | 55.0% | |
| TAAGGACCTCATGGCTGCAG+AGG | - | chr4_4:69710859-69710878 | Msa0699120:CDS | 55.0% | |
| GAGTTGGGACCCTAGTGCTC+AGG | - | chr4_4:69709757-69709776 | Msa0699120:CDS | 60.0% | |
| CTAAGGGCCGGAAACTGTGC+AGG | + | chr4_4:69710082-69710101 | Msa0699110:intron | 60.0% | |
| TGGTGGAGGGGATGAGATGG+AGG | - | chr4_4:69710168-69710187 | Msa0699120:intron | 60.0% | |
| GGTGGAGGGGATGAGATGGA+GGG | - | chr4_4:69710169-69710188 | Msa0699120:intron | 60.0% | |
| GGGGATGAGATGGAGGGAGA+TGG | - | chr4_4:69710175-69710194 | Msa0699120:intron | 60.0% | |
| GAGTTGGGACCCTAGTGCTC+AGG | - | chr4_4:69709757-69709776 | Msa0699120:CDS | 60.0% | |
| CTAAGGGCCGGAAACTGTGC+AGG | + | chr4_4:69710082-69710101 | Msa0699110:intron | 60.0% | |
| TGGTGGAGGGGATGAGATGG+AGG | - | chr4_4:69710168-69710187 | Msa0699120:intron | 60.0% | |
| GGTGGAGGGGATGAGATGGA+GGG | - | chr4_4:69710169-69710188 | Msa0699120:intron | 60.0% | |
| GGGGATGAGATGGAGGGAGA+TGG | - | chr4_4:69710175-69710194 | Msa0699120:intron | 60.0% | |
| GGGCCGGAAACTGTGCAGGA+AGG | + | chr4_4:69710078-69710097 | Msa0699110:intron | 65.0% | |
| GGGCCGGAAACTGTGCAGGA+AGG | + | chr4_4:69710078-69710097 | Msa0699110:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 69709395 | 69711266 | 69709395 | ID=Msa0699120;Name=Msa0699120 |
| chr4_4 | mRNA | 69709395 | 69711266 | 69709395 | ID=Msa0699120-mRNA-1;Parent=Msa0699120;Name=Msa0699120-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0.5|0|1|1|1|3|0|484 |
| chr4_4 | exon | 69710310 | 69711266 | 69710310 | ID=Msa0699120-mRNA-1:exon:20973;Parent=Msa0699120-mRNA-1 |
| chr4_4 | exon | 69709594 | 69709989 | 69709594 | ID=Msa0699120-mRNA-1:exon:20972;Parent=Msa0699120-mRNA-1 |
| chr4_4 | exon | 69709395 | 69709496 | 69709395 | ID=Msa0699120-mRNA-1:exon:20971;Parent=Msa0699120-mRNA-1 |
| chr4_4 | CDS | 69710310 | 69711266 | 69710310 | ID=Msa0699120-mRNA-1:cds;Parent=Msa0699120-mRNA-1 |
| chr4_4 | CDS | 69709594 | 69709989 | 69709594 | ID=Msa0699120-mRNA-1:cds;Parent=Msa0699120-mRNA-1 |
| chr4_4 | CDS | 69709395 | 69709496 | 69709395 | ID=Msa0699120-mRNA-1:cds;Parent=Msa0699120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
