Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699350 | XP_039684755.1 | 90.373 | 322 | 3 | 2 | 1 | 322 | 1 | 294 | 0.0 | 573 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699350 | sp|Q9ZUM2|TOM3_ARATH | 78.247 | 308 | 39 | 2 | 15 | 322 | 24 | 303 | 4.24e-175 | 489 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699350 | A0A396GMB7 | 90.373 | 322 | 3 | 2 | 1 | 322 | 1 | 294 | 0.0 | 573 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0616150 | Msa0699350 | 0.842972 | 1.865040e-58 | -8.615850e-47 |
| Msa0655550 | Msa0699350 | 0.831306 | 1.799055e-55 | -8.615850e-47 |
| Msa0562210 | Msa0699350 | 0.867276 | 1.542058e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699350 | MtrunA17_Chr8g0375261 | 90.373 | 322 | 3 | 2 | 1 | 322 | 1 | 294 | 0.0 | 573 |
| Msa0699350 | MtrunA17_Chr1g0162201 | 77.377 | 305 | 41 | 2 | 18 | 322 | 21 | 297 | 2.54e-170 | 474 |
| Msa0699350 | MtrunA17_Chr4g0050391 | 52.443 | 307 | 118 | 2 | 16 | 322 | 11 | 289 | 1.78e-111 | 325 |
| Msa0699350 | MtrunA17_Chr2g0288191 | 52.881 | 295 | 106 | 3 | 28 | 322 | 23 | 284 | 6.78e-103 | 303 |
| Msa0699350 | MtrunA17_Chr4g0074691 | 51.316 | 304 | 120 | 2 | 19 | 322 | 3 | 278 | 1.32e-99 | 294 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699350 | AT2G02180.1 | 78.247 | 308 | 39 | 2 | 15 | 322 | 24 | 303 | 4.31e-176 | 489 |
| Msa0699350 | AT1G14530.2 | 75.466 | 322 | 50 | 3 | 1 | 322 | 1 | 293 | 9.99e-165 | 460 |
| Msa0699350 | AT1G14530.1 | 72.285 | 267 | 45 | 3 | 1 | 267 | 1 | 238 | 1.00e-136 | 387 |
| Msa0699350 | AT4G21790.1 | 53.628 | 317 | 114 | 3 | 6 | 322 | 8 | 291 | 8.07e-114 | 331 |
Find 114 sgRNAs with CRISPR-Local
Find 430 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAATATTGCCTTCTTCTT+TGG | 0.176525 | 4_4:-69986753 | Msa0699350:CDS |
| CTTTACCACATATGCACTTT+TGG | 0.209497 | 4_4:-69991396 | Msa0699350:CDS |
| TTATGAAACGTGACATTATA+TGG | 0.218123 | 4_4:-69986498 | Msa0699350:three_prime_UTR |
| CCGGCGATGGAGAAATAATT+TGG | 0.238093 | 4_4:+69992273 | None:intergenic |
| GCCCTTGGCTTTCTACTCTA+TGG | 0.238950 | 4_4:-69988128 | Msa0699350:CDS |
| TTGCTTTGTGGTTGATATTA+TGG | 0.254119 | 4_4:-69988324 | Msa0699350:CDS |
| TGCTGTGGTTTATGTTATTC+AGG | 0.265350 | 4_4:-69991181 | Msa0699350:intron |
| CACCCACTTGTAACAGTTAC+AGG | 0.267023 | 4_4:+69986276 | None:intergenic |
| ATTAGAGGTTACATGTTTCT+TGG | 0.269866 | 4_4:-69986631 | Msa0699350:three_prime_UTR |
| ATATATACTTGCATTGTCTA+TGG | 0.272928 | 4_4:-69986407 | Msa0699350:three_prime_UTR |
| GTCTCTTTGTTTGCAGCCCT+TGG | 0.301193 | 4_4:-69988143 | Msa0699350:CDS |
| CCAATTCGCTGAAAAGATTA+TGG | 0.308778 | 4_4:-69986677 | Msa0699350:exon |
| CTTCCTTATCAGATGTGTTA+TGG | 0.312187 | 4_4:-69987491 | Msa0699350:intron |
| CACCTCCTCGCTATCCTCTA+TGG | 0.348130 | 4_4:-69991926 | Msa0699350:CDS |
| CAGAGGCGTGCCGGCGGAGG+CGG | 0.361590 | 4_4:-69992041 | Msa0699350:CDS |
| AACTCACCAGGTAATATATA+AGG | 0.373101 | 4_4:+69987327 | None:intergenic |
| CAATTAAGAGTACCGGAATA+TGG | 0.377199 | 4_4:-69991783 | Msa0699350:CDS |
| TTCATAATCTACAAACCTTA+AGG | 0.381501 | 4_4:+69986514 | None:intergenic |
| TAGTCATGAGGCATCATTAG+AGG | 0.382208 | 4_4:-69986646 | Msa0699350:three_prime_UTR |
| CGCCTCCGCCGGCACGCCTC+TGG | 0.382989 | 4_4:+69992042 | None:intergenic |
| TGGATTTAAAGTTCTCCTTA+AGG | 0.383207 | 4_4:-69986529 | Msa0699350:three_prime_UTR |
| TTATCGAAGATGTTCTTTGC+AGG | 0.388311 | 4_4:-69988274 | Msa0699350:intron |
| CGACGACCTTTAGATTCAAC+AGG | 0.394329 | 4_4:+69987669 | None:intergenic |
| TGCGTGGTCCAACCATATTC+CGG | 0.407251 | 4_4:+69991771 | None:intergenic |
| ATACCTCTGGCTGTAACTTC+TGG | 0.414708 | 4_4:+69991578 | None:intergenic |
| CGTGCCGGCGGAGGCGGTGA+TGG | 0.421128 | 4_4:-69992035 | Msa0699350:CDS |
| CGGCGATGGAGAAATAATTT+GGG | 0.426439 | 4_4:+69992274 | None:intergenic |
| CGCTTTCCTGTTGAATCTAA+AGG | 0.430705 | 4_4:-69987675 | Msa0699350:CDS |
| GACCAGAGGCGTGCCGGCGG+AGG | 0.438883 | 4_4:-69992044 | Msa0699350:CDS |
| CTCACTCGACATACAAAATA+CGG | 0.442818 | 4_4:+69986565 | None:intergenic |
| GGTCACCGCCCTTGACTTCA+CGG | 0.448418 | 4_4:-69992008 | Msa0699350:CDS |
| TTTAGATTAGCGAGAGATAA+CGG | 0.451599 | 4_4:+69992298 | None:intergenic |
| TATGGATTGTCAAACGTGTT+GGG | 0.454493 | 4_4:-69986480 | Msa0699350:three_prime_UTR |
| TCATAGATCACGCACAGAAA+AGG | 0.476640 | 4_4:+69987720 | None:intergenic |
| AAGGCTATGCTTATGTCAAA+AGG | 0.478912 | 4_4:+69986163 | None:intergenic |
| TAACCATAACACATCTGATA+AGG | 0.480348 | 4_4:+69987488 | None:intergenic |
| CCAAATTATTTCTCCATCGC+CGG | 0.481159 | 4_4:-69992273 | Msa0699350:five_prime_UTR |
| CATAGAGGATAGCGAGGAGG+TGG | 0.481655 | 4_4:+69991927 | None:intergenic |
| GTAATATATAAGGTTTAGAA+TGG | 0.488783 | 4_4:+69987337 | None:intergenic |
| TTGGGCTGAGATTTATTACC+AGG | 0.492648 | 4_4:-69991366 | Msa0699350:CDS |
| AATCGTCGCCGCCATCGCTC+TGG | 0.496468 | 4_4:-69991903 | Msa0699350:intron |
| AAATGTTTCAGATTGCTTTG+TGG | 0.500624 | 4_4:-69988336 | Msa0699350:intron |
| CAGAAAAGGTACAGTGGGTA+TGG | 0.501417 | 4_4:+69987734 | None:intergenic |
| GCATTAATTGTGTAGAAACT+TGG | 0.501451 | 4_4:+69991201 | None:intergenic |
| GGCGGAGGCGGTGATGGCCG+TGG | 0.504979 | 4_4:-69992029 | Msa0699350:CDS |
| ATATGGATTGTCAAACGTGT+TGG | 0.508276 | 4_4:-69986481 | Msa0699350:three_prime_UTR |
| GAGCACCAAAAGTGCATATG+TGG | 0.510673 | 4_4:+69991391 | None:intergenic |
| ACTTCACGGAAACATCCAAC+TGG | 0.511782 | 4_4:-69991994 | Msa0699350:CDS |
| GTAGCTTCCTCAAAATGAAA+AGG | 0.513962 | 4_4:+69986729 | None:intergenic |
| TATATACTTGCATTGTCTAT+GGG | 0.520982 | 4_4:-69986406 | Msa0699350:three_prime_UTR |
| TAGAATACAATTAAGAGTAC+CGG | 0.522473 | 4_4:-69991790 | Msa0699350:CDS |
| ATGAAAAGGACCAAAGAAGA+AGG | 0.522475 | 4_4:+69986743 | None:intergenic |
| CAACAACTCTCCTCTCTGGC+AGG | 0.522527 | 4_4:-69991960 | Msa0699350:CDS |
| TGTCCTCTAGAAATTATCCT+TGG | 0.522542 | 4_4:+69986595 | None:intergenic |
| AAAACGAACCAGAGCGATGG+CGG | 0.523251 | 4_4:+69991895 | None:intergenic |
| TTGAATTGCTGAACATGAAA+AGG | 0.528230 | 4_4:+69986371 | None:intergenic |
| ACATCAACAACTCTCCTCTC+TGG | 0.529738 | 4_4:-69991964 | Msa0699350:CDS |
| CTTGGCTTTCTACTCTATGG+TGG | 0.530341 | 4_4:-69988125 | Msa0699350:CDS |
| AAAATAATTGAGCGATTCGA+TGG | 0.534342 | 4_4:-69992068 | Msa0699350:exon |
| TAGCGAGGAGGTGGAAGATA+CGG | 0.535206 | 4_4:+69991936 | None:intergenic |
| GAGTGAGAGAGCTAATATCT+TGG | 0.539560 | 4_4:-69986549 | Msa0699350:three_prime_UTR |
| ACGGCCATCACCGCCTCCGC+CGG | 0.540048 | 4_4:+69992031 | None:intergenic |
| TGGATGTTTCCGTGAAGTCA+AGG | 0.541628 | 4_4:+69991999 | None:intergenic |
| CTTTGTGGTTGATATTATGG+TGG | 0.550586 | 4_4:-69988321 | Msa0699350:CDS |
| TTGGATGTTTCTGCACTCCA+AGG | 0.550630 | 4_4:-69986612 | Msa0699350:three_prime_UTR |
| AAAATCACCAGCATGCGGAC+AGG | 0.552128 | 4_4:+69988295 | None:intergenic |
| TAATATATAAGGTTTAGAAT+GGG | 0.554623 | 4_4:+69987338 | None:intergenic |
| TAAGAGTACCGGAATATGGT+TGG | 0.556003 | 4_4:-69991779 | Msa0699350:CDS |
| GATGGTGACCAGAGGCGTGC+CGG | 0.559261 | 4_4:-69992050 | Msa0699350:CDS |
| GCTTTCTACTCTATGGTGGA+AGG | 0.561467 | 4_4:-69988121 | Msa0699350:intron |
| TTTCTACACAATTAATGCTG+TGG | 0.561632 | 4_4:-69991196 | Msa0699350:CDS |
| CAAGACTTGGCATGTCAAGT+AGG | 0.569835 | 4_4:+69991423 | None:intergenic |
| CTTTAATGCATTTGATAAAG+CGG | 0.572380 | 4_4:-69987384 | Msa0699350:CDS |
| ATTCCTGTAACTGTTACAAG+TGG | 0.575083 | 4_4:-69986279 | Msa0699350:three_prime_UTR |
| GAAGTCAAGGGCGGTGACCA+CGG | 0.575503 | 4_4:+69992012 | None:intergenic |
| GGATGTTTCCGTGAAGTCAA+GGG | 0.578164 | 4_4:+69992000 | None:intergenic |
| CACCATAGAGTAGAAAGCCA+AGG | 0.584379 | 4_4:+69988126 | None:intergenic |
| GTGGTAAAGAAAGCAAGACT+TGG | 0.586699 | 4_4:+69991410 | None:intergenic |
| TACTGTGTGATACCTCGCTT+AGG | 0.586918 | 4_4:+69986704 | None:intergenic |
| TGAATGAAATATTTAGATCG+TGG | 0.590121 | 4_4:+69986232 | None:intergenic |
| TCTAAACCTTATATATTACC+TGG | 0.590927 | 4_4:-69987333 | Msa0699350:intron |
| TGGGATGGTTCAAGACATCA+AGG | 0.591039 | 4_4:+69987357 | None:intergenic |
| GGTGACCAGAGGCGTGCCGG+CGG | 0.593085 | 4_4:-69992047 | Msa0699350:CDS |
| GTTGATGTCTCTCCACCAGT+TGG | 0.593361 | 4_4:+69991979 | None:intergenic |
| GTAACTTCTGGACATCTCGC+CGG | 0.593820 | 4_4:+69991590 | None:intergenic |
| GTGGAAACCTGTCCGCATGC+TGG | 0.596961 | 4_4:-69988302 | Msa0699350:CDS |
| ACAGTGGGTATGGTGATCAA+AGG | 0.602275 | 4_4:+69987744 | None:intergenic |
| ATATGGTTGGACCACGCAGA+AGG | 0.605809 | 4_4:-69991766 | Msa0699350:CDS |
| CTGTAACTGTTACAAGTGGG+TGG | 0.616938 | 4_4:-69986275 | Msa0699350:three_prime_UTR |
| ATATAAGGTTTAGAATGGGA+TGG | 0.619205 | 4_4:+69987342 | None:intergenic |
| GCACGAGCTGTATCTACCGA+TGG | 0.625538 | 4_4:-69991231 | Msa0699350:CDS |
| ACCATAGAGTAGAAAGCCAA+GGG | 0.626533 | 4_4:+69988127 | None:intergenic |
| TTCCTGTAACTGTTACAAGT+GGG | 0.627003 | 4_4:-69986278 | Msa0699350:three_prime_UTR |
| TCACGGAAACATCCAACTGG+TGG | 0.629262 | 4_4:-69991991 | Msa0699350:CDS |
| GAAACTTGGTCTCAGACCAT+CGG | 0.635057 | 4_4:+69991215 | None:intergenic |
| ACGCACAGAAAAGGTACAGT+GGG | 0.636239 | 4_4:+69987729 | None:intergenic |
| TGTCCAGAAGTTACAGCCAG+AGG | 0.640455 | 4_4:-69991581 | Msa0699350:intron |
| TGGCGGCGACGATTCCATAG+AGG | 0.642898 | 4_4:+69991912 | None:intergenic |
| ATGGCGAAAACTTAGTCATG+AGG | 0.644807 | 4_4:-69986658 | Msa0699350:three_prime_UTR |
| CGATTCCATAGAGGATAGCG+AGG | 0.651312 | 4_4:+69991921 | None:intergenic |
| GAGAAAACGAACCAGAGCGA+TGG | 0.659605 | 4_4:+69991892 | None:intergenic |
| CATTGTCTATGGGAAAATGT+CGG | 0.669753 | 4_4:-69986396 | Msa0699350:three_prime_UTR |
| AAGATACGGTCCTGCCAGAG+AGG | 0.674122 | 4_4:+69991950 | None:intergenic |
| ACTCCAAGGATAATTTCTAG+AGG | 0.681653 | 4_4:-69986598 | Msa0699350:three_prime_UTR |
| TCGATAAAATCACCAGCATG+CGG | 0.684673 | 4_4:+69988290 | None:intergenic |
| TGTGTGATACCTCGCTTAGG+CGG | 0.685930 | 4_4:+69986707 | None:intergenic |
| AGGAAGCTACCGCCTAAGCG+AGG | 0.687791 | 4_4:-69986716 | Msa0699350:CDS |
| TCGTCGCAAGAAGCTACAAG+AGG | 0.688794 | 4_4:-69987652 | Msa0699350:intron |
| CACGCACAGAAAAGGTACAG+TGG | 0.691363 | 4_4:+69987728 | None:intergenic |
| AGCGATTCGATGGTGACCAG+AGG | 0.694087 | 4_4:-69992058 | Msa0699350:exon |
| TTCCATAGAGGATAGCGAGG+AGG | 0.704072 | 4_4:+69991924 | None:intergenic |
| TGTTTCCGTGAAGTCAAGGG+CGG | 0.720130 | 4_4:+69992003 | None:intergenic |
| AGATTAGCGAGAGATAACGG+AGG | 0.753796 | 4_4:+69992301 | None:intergenic |
| AAAGTGAAAGACCTTCTGCG+TGG | 0.764322 | 4_4:+69991755 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATATTTAATACTAATAATT+TGG | - | chr4_4:69989578-69989597 | Msa0699350:intron | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | + | chr4_4:69989959-69989978 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | + | chr4_4:69989960-69989979 | None:intergenic | 10.0% |
| !! | TTTAAATAGCAACTTTATAT+TGG | - | chr4_4:69987173-69987192 | Msa0699350:intron | 15.0% |
| !!! | AGTTGTTTTTTTTTTTTTTG+TGG | - | chr4_4:69987355-69987374 | Msa0699350:CDS | 15.0% |
| !! | AAAAGTAACAGTATAATATA+AGG | + | chr4_4:69988327-69988346 | None:intergenic | 15.0% |
| !! | TGAAAAATATCATATTTGAA+GGG | + | chr4_4:69989266-69989285 | None:intergenic | 15.0% |
| !! | ATGAAAAATATCATATTTGA+AGG | + | chr4_4:69989267-69989286 | None:intergenic | 15.0% |
| !! | ATTAAATATGAATGAGTATT+AGG | + | chr4_4:69989568-69989587 | None:intergenic | 15.0% |
| !! | TATTAATTAGAGTTATAAAG+GGG | + | chr4_4:69989898-69989917 | None:intergenic | 15.0% |
| !! | GTATTAATTAGAGTTATAAA+GGG | + | chr4_4:69989899-69989918 | None:intergenic | 15.0% |
| !! | AGTATTAATTAGAGTTATAA+AGG | + | chr4_4:69989900-69989919 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | + | chr4_4:69989958-69989977 | None:intergenic | 15.0% |
| !!! | ATGTATAAATATTTTGTCTA+TGG | - | chr4_4:69990617-69990636 | Msa0699350:intron | 15.0% |
| !!! | TAATATATAAGGTTTAGAAT+GGG | + | chr4_4:69991140-69991159 | None:intergenic | 15.0% |
| !!! | TATTATCGTTTTGTTTTGTT+TGG | + | chr4_4:69986276-69986295 | None:intergenic | 20.0% |
| !!! | GATTTTTTGTTGTCAATTTT+AGG | - | chr4_4:69986652-69986671 | Msa0699350:three_prime_UTR | 20.0% |
| !! | ATAGTTGCATTTAATTCTAA+AGG | - | chr4_4:69986994-69987013 | Msa0699350:intron | 20.0% |
| !!! | TTTTTTTTTTTTTGTGGCAA+TGG | - | chr4_4:69987361-69987380 | Msa0699350:CDS | 20.0% |
| !! | ACTAGAAAATTTGAAAAAAC+CGG | - | chr4_4:69987944-69987963 | Msa0699350:intron | 20.0% |
| !! | ACTAAAAAACTAACAATGTT+TGG | + | chr4_4:69988151-69988170 | None:intergenic | 20.0% |
| !!! | TACTTAAAAATTGACTTCTT+GGG | + | chr4_4:69988782-69988801 | None:intergenic | 20.0% |
| !! | ATAGAAAAATGTAAATGGTT+GGG | + | chr4_4:69989078-69989097 | None:intergenic | 20.0% |
| !! | AACACATAGAAAAATGTAAA+TGG | + | chr4_4:69989083-69989102 | None:intergenic | 20.0% |
| !!! | ATTTACATTTTTCTATGTGT+TGG | - | chr4_4:69989082-69989101 | Msa0699350:intron | 20.0% |
| !! | ATTACAAGTAAACGAATAAT+TGG | - | chr4_4:69989345-69989364 | Msa0699350:intron | 20.0% |
| !! | ATTCCTGAAAAAAAGTTATA+TGG | - | chr4_4:69989392-69989411 | Msa0699350:intron | 20.0% |
| !! | AAAGTGGAATATATTGAATT+GGG | + | chr4_4:69989873-69989892 | None:intergenic | 20.0% |
| !! | AAAAGTGGAATATATTGAAT+TGG | + | chr4_4:69989874-69989893 | None:intergenic | 20.0% |
| !! | AAAGTGGAATATATTGAATT+GGG | + | chr4_4:69989873-69989892 | None:intergenic | 20.0% |
| !! | GTAATATATAAGGTTTAGAA+TGG | + | chr4_4:69991141-69991160 | None:intergenic | 20.0% |
| !!! | CAAATAATTTCCTTTTTACA+TGG | + | chr4_4:69991530-69991549 | None:intergenic | 20.0% |
| !! | TAAAATAATTCTGTAACCAT+CGG | + | chr4_4:69991584-69991603 | None:intergenic | 20.0% |
| !! | AATTTAAGCTTCACAAAAAA+AGG | + | chr4_4:69992290-69992309 | None:intergenic | 20.0% |
| !!! | TAGTGTTGTTGTTTTTTGTT+GGG | + | chr4_4:69986241-69986260 | None:intergenic | 25.0% |
| !!! | ATAGTGTTGTTGTTTTTTGT+TGG | + | chr4_4:69986242-69986261 | None:intergenic | 25.0% |
| !! | TAGAATACAATTAAGAGTAC+CGG | - | chr4_4:69986685-69986704 | Msa0699350:exon | 25.0% |
| !!! | TTTCTCAATTTTTTCGTCAA+TGG | - | chr4_4:69986740-69986759 | Msa0699350:CDS | 25.0% |
| !!! | TTCTCAATTTTTTCGTCAAT+GGG | - | chr4_4:69986741-69986760 | Msa0699350:CDS | 25.0% |
| ! | ATTTATTCTCATACTCACTT+AGG | - | chr4_4:69986938-69986957 | Msa0699350:intron | 25.0% |
| ! | ACATGATCAAATATGAAATC+AGG | + | chr4_4:69987217-69987236 | None:intergenic | 25.0% |
| !! | AATAGAGATGAAGAATTTTC+TGG | - | chr4_4:69987640-69987659 | Msa0699350:intron | 25.0% |
| !!! | TTGTTAGTTTTTTAGTTGTC+TGG | - | chr4_4:69988155-69988174 | Msa0699350:intron | 25.0% |
| ! | ATTCAATAGAGAAATTCGTT+AGG | + | chr4_4:69988235-69988254 | None:intergenic | 25.0% |
| !! | ATACAATGATAGTGAACAAT+TGG | + | chr4_4:69988287-69988306 | None:intergenic | 25.0% |
| ! | CTAATACTAAAATTGAGTCA+TGG | + | chr4_4:69988390-69988409 | None:intergenic | 25.0% |
| !!! | GTATTAGTTTTTTACTGATC+AGG | - | chr4_4:69988403-69988422 | Msa0699350:intron | 25.0% |
| !! | ACTTAAAAATTGACTTCTTG+GGG | + | chr4_4:69988781-69988800 | None:intergenic | 25.0% |
| !! | GTACTTAAAAATTGACTTCT+TGG | + | chr4_4:69988783-69988802 | None:intergenic | 25.0% |
| ! | CATAGAAAAATGTAAATGGT+TGG | + | chr4_4:69989079-69989098 | None:intergenic | 25.0% |
| ! | ATACCACTCTAATAAGAATA+AGG | - | chr4_4:69989455-69989474 | Msa0699350:intron | 25.0% |
| ! | TACCACTCTAATAAGAATAA+GGG | - | chr4_4:69989456-69989475 | Msa0699350:intron | 25.0% |
| ! | AATAACAGAACTGATAACAA+AGG | + | chr4_4:69989752-69989771 | None:intergenic | 25.0% |
| !!! | GGACACTTTTTTTTAGTAAA+TGG | + | chr4_4:69989805-69989824 | None:intergenic | 25.0% |
| !!! | TGAAATGACTCAGTTATTTT+GGG | + | chr4_4:69989826-69989845 | None:intergenic | 25.0% |
| !! | TTGAAATGACTCAGTTATTT+TGG | + | chr4_4:69989827-69989846 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGAAT+TGG | + | chr4_4:69989936-69989955 | None:intergenic | 25.0% |
| !! | TTTGTTTCATTTTGTGTGTT+TGG | - | chr4_4:69990240-69990259 | Msa0699350:intron | 25.0% |
| ! | GAATGATCATAACATTAATC+AGG | - | chr4_4:69990286-69990305 | Msa0699350:intron | 25.0% |
| !! | TTTTCCTATACATGTATGTA+GGG | - | chr4_4:69990309-69990328 | Msa0699350:intron | 25.0% |
| ! | ATTCCATTATTGCAAAAACA+TGG | - | chr4_4:69990589-69990608 | Msa0699350:intron | 25.0% |
| ! | GTTATAAGTTTACTTGCATT+AGG | - | chr4_4:69990693-69990712 | Msa0699350:intron | 25.0% |
| ! | TGTTTGATTGCATATCATAA+AGG | - | chr4_4:69990868-69990887 | Msa0699350:intron | 25.0% |
| ! | GTTTGATTGCATATCATAAA+GGG | - | chr4_4:69990869-69990888 | Msa0699350:intron | 25.0% |
| ! | CTTTAATGCATTTGATAAAG+CGG | - | chr4_4:69991091-69991110 | Msa0699350:intron | 25.0% |
| ! | TCTAAACCTTATATATTACC+TGG | - | chr4_4:69991142-69991161 | Msa0699350:intron | 25.0% |
| ! | AAAACTAACACATAATTCAG+TGG | + | chr4_4:69991279-69991298 | None:intergenic | 25.0% |
| ! | CAGAAAAAATTAATTTAGGC+AGG | + | chr4_4:69991307-69991326 | None:intergenic | 25.0% |
| !!! | CTGCCTAAATTAATTTTTTC+TGG | - | chr4_4:69991305-69991324 | Msa0699350:intron | 25.0% |
| ! | ACGCCAGAAAAAATTAATTT+AGG | + | chr4_4:69991311-69991330 | None:intergenic | 25.0% |
| !!! | GTTTTAATGTCCATGTAAAA+AGG | - | chr4_4:69991517-69991536 | Msa0699350:intron | 25.0% |
| ! | AATAATTGTAATTTCTCCGA+TGG | - | chr4_4:69991565-69991584 | Msa0699350:intron | 25.0% |
| !!! | GGTTACAGAATTATTTTACT+CGG | - | chr4_4:69991586-69991605 | Msa0699350:CDS | 25.0% |
| ! | TTTACTCGGTTATTAACATT+TGG | - | chr4_4:69991600-69991619 | Msa0699350:CDS | 25.0% |
| ! | TAAAGTGTAAGTCATGAAAA+AGG | - | chr4_4:69991625-69991644 | Msa0699350:intron | 25.0% |
| ! | AAAGTGTAAGTCATGAAAAA+GGG | - | chr4_4:69991626-69991645 | Msa0699350:intron | 25.0% |
| ! | TTCATAATCTACAAACCTTA+AGG | + | chr4_4:69991964-69991983 | None:intergenic | 25.0% |
| ! | TTATGAAACGTGACATTATA+TGG | - | chr4_4:69991977-69991996 | Msa0699350:CDS | 25.0% |
| ! | ATATATACTTGCATTGTCTA+TGG | - | chr4_4:69992068-69992087 | Msa0699350:exon | 25.0% |
| ! | TATATACTTGCATTGTCTAT+GGG | - | chr4_4:69992069-69992088 | Msa0699350:exon | 25.0% |
| ! | TGAATGAAATATTTAGATCG+TGG | + | chr4_4:69992246-69992265 | None:intergenic | 25.0% |
| ! | TTCACAAAAAAAGGAAAGTA+GGG | + | chr4_4:69992281-69992300 | None:intergenic | 25.0% |
| TTTAGATTAGCGAGAGATAA+CGG | + | chr4_4:69986180-69986199 | None:intergenic | 30.0% | |
| !!! | TTTTGTTGGGTTTTGTTTTG+TGG | + | chr4_4:69986228-69986247 | None:intergenic | 30.0% |
| AAAATAATTGAGCGATTCGA+TGG | - | chr4_4:69986407-69986426 | Msa0699350:three_prime_UTR | 30.0% | |
| AAACCCTAAGAAACGAAAAT+GGG | + | chr4_4:69986608-69986627 | None:intergenic | 30.0% | |
| AAAACCCTAAGAAACGAAAA+TGG | + | chr4_4:69986609-69986628 | None:intergenic | 30.0% | |
| !!! | TCTCAATTTTTTCGTCAATG+GGG | - | chr4_4:69986742-69986761 | Msa0699350:CDS | 30.0% |
| !!! | GATGTTTTGTTTTCGTTTTC+CGG | - | chr4_4:69986866-69986885 | Msa0699350:intron | 30.0% |
| CATAAAAAGTAAAACTTGCC+TGG | + | chr4_4:69987130-69987149 | None:intergenic | 30.0% | |
| ! | CATATTTGATCATGTTTTGC+AGG | - | chr4_4:69987222-69987241 | Msa0699350:intron | 30.0% |
| GCATTAATTGTGTAGAAACT+TGG | + | chr4_4:69987277-69987296 | None:intergenic | 30.0% | |
| TTTCTACACAATTAATGCTG+TGG | - | chr4_4:69987279-69987298 | Msa0699350:intron | 30.0% | |
| CACAAGATGAAAATGTAAAC+AGG | + | chr4_4:69987400-69987419 | None:intergenic | 30.0% | |
| TCTGCATTATTTGATTCCAA+AGG | - | chr4_4:69987678-69987697 | Msa0699350:CDS | 30.0% | |
| TTTGATTCCAAAGGATAAAG+AGG | - | chr4_4:69987687-69987706 | Msa0699350:CDS | 30.0% | |
| ATATTCATTCACAGTACTGT+TGG | - | chr4_4:69987765-69987784 | Msa0699350:intron | 30.0% | |
| TATTCATTCACAGTACTGTT+GGG | - | chr4_4:69987766-69987785 | Msa0699350:intron | 30.0% | |
| ATTAACCCAGTTATAATGTG+AGG | + | chr4_4:69987997-69988016 | None:intergenic | 30.0% | |
| AACAATGTTTGGCAAATGTT+TGG | + | chr4_4:69988140-69988159 | None:intergenic | 30.0% | |
| AATTCGTTAGGCATTATATG+TGG | + | chr4_4:69988223-69988242 | None:intergenic | 30.0% | |
| TTACCAGAAAATTTCAAGAC+AGG | + | chr4_4:69988261-69988280 | None:intergenic | 30.0% | |
| TTGTTCACTATCATTGTATC+AGG | - | chr4_4:69988288-69988307 | Msa0699350:CDS | 30.0% | |
| TATCATCATCTACCAAAAGT+AGG | - | chr4_4:69988434-69988453 | Msa0699350:intron | 30.0% | |
| GTGATGATTATTCGTATAAC+AGG | + | chr4_4:69988556-69988575 | None:intergenic | 30.0% | |
| ATGATTCTGTACATGTTAAG+TGG | + | chr4_4:69988670-69988689 | None:intergenic | 30.0% | |
| TAAGTACCAAAGAAAATAGC+CGG | - | chr4_4:69988796-69988815 | Msa0699350:intron | 30.0% | |
| TTAAGCCTTTCAGTGTAATT+TGG | + | chr4_4:69989008-69989027 | None:intergenic | 30.0% | |
| AAAAATGTAAATGGTTGGGA+AGG | + | chr4_4:69989074-69989093 | None:intergenic | 30.0% | |
| ! | ATATCATATTTGAAGGGCAT+GGG | + | chr4_4:69989260-69989279 | None:intergenic | 30.0% |
| AATATCATATTTGAAGGGCA+TGG | + | chr4_4:69989261-69989280 | None:intergenic | 30.0% | |
| TGGAATGTAAAAGAGTTCTA+TGG | - | chr4_4:69989365-69989384 | Msa0699350:intron | 30.0% | |
| GGAATGTAAAAGAGTTCTAT+GGG | - | chr4_4:69989366-69989385 | Msa0699350:intron | 30.0% | |
| !!! | GGTCCATATAACTTTTTTTC+AGG | + | chr4_4:69989398-69989417 | None:intergenic | 30.0% |
| TACCCTTATTCTTATTAGAG+TGG | + | chr4_4:69989461-69989480 | None:intergenic | 30.0% | |
| AAGAATAAGGGTAGAGAATA+AGG | - | chr4_4:69989468-69989487 | Msa0699350:intron | 30.0% | |
| AAAAGAGAGAAAACAACTTC+AGG | - | chr4_4:69989493-69989512 | Msa0699350:intron | 30.0% | |
| TGAGTATTAGGCTAAGATAT+TGG | + | chr4_4:69989556-69989575 | None:intergenic | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | + | chr4_4:69989951-69989970 | None:intergenic | 30.0% | |
| AAATGTTTCAGATTGCTTTG+TGG | - | chr4_4:69990139-69990158 | Msa0699350:intron | 30.0% | |
| ! | TTGCTTTGTGGTTGATATTA+TGG | - | chr4_4:69990151-69990170 | Msa0699350:intron | 30.0% |
| ! | GTTTTCCTATACATGTATGT+AGG | - | chr4_4:69990308-69990327 | Msa0699350:intron | 30.0% |
| TTTCCTATACATGTATGTAG+GGG | - | chr4_4:69990310-69990329 | Msa0699350:intron | 30.0% | |
| !! | TTGGACTTTGGAATATTGAA+TGG | - | chr4_4:69990415-69990434 | Msa0699350:intron | 30.0% |
| !!! | TCATTTTTTCACTTCAGACA+AGG | + | chr4_4:69990486-69990505 | None:intergenic | 30.0% |
| !! | TGACCATGTTTTTGCAATAA+TGG | + | chr4_4:69990595-69990614 | None:intergenic | 30.0% |
| !!! | AAGAGGTACTCAATTTTACA+TGG | - | chr4_4:69990840-69990859 | Msa0699350:intron | 30.0% |
| ! | AAGGAAGCATGAAAAACATA+TGG | + | chr4_4:69990971-69990990 | None:intergenic | 30.0% |
| TAACCATAACACATCTGATA+AGG | + | chr4_4:69990990-69991009 | None:intergenic | 30.0% | |
| ACTCTATGATTCTTGTTGAT+TGG | - | chr4_4:69991026-69991045 | Msa0699350:intron | 30.0% | |
| ! | ATATAAGGTTTAGAATGGGA+TGG | + | chr4_4:69991136-69991155 | None:intergenic | 30.0% |
| AACTCACCAGGTAATATATA+AGG | + | chr4_4:69991151-69991170 | None:intergenic | 30.0% | |
| AGCTCAAATTGAATGTTACA+AGG | + | chr4_4:69991187-69991206 | None:intergenic | 30.0% | |
| ACATTCAATTTGAGCTCATA+AGG | - | chr4_4:69991191-69991210 | Msa0699350:CDS | 30.0% | |
| TTGTAGAAAAAATTCAGGCA+GGG | + | chr4_4:69991256-69991275 | None:intergenic | 30.0% | |
| AGTGGTTGTAGAAAAAATTC+AGG | + | chr4_4:69991261-69991280 | None:intergenic | 30.0% | |
| ! | TACAAATTCACTGGCTAATT+AGG | + | chr4_4:69991384-69991403 | None:intergenic | 30.0% |
| TATCTGACTTACAAATTCAC+TGG | + | chr4_4:69991393-69991412 | None:intergenic | 30.0% | |
| TTCCTCCAATTCATATTGTT+AGG | - | chr4_4:69991435-69991454 | Msa0699350:CDS | 30.0% | |
| TCCTCCAATTCATATTGTTA+GGG | - | chr4_4:69991436-69991455 | Msa0699350:CDS | 30.0% | |
| AGATCCCTAACAATATGAAT+TGG | + | chr4_4:69991443-69991462 | None:intergenic | 30.0% | |
| ! | AGAAATTTTCTCTTGGGAAA+TGG | - | chr4_4:69991485-69991504 | Msa0699350:intron | 30.0% |
| ! | CATAATCTTTTCAGCGAATT+GGG | + | chr4_4:69991800-69991819 | None:intergenic | 30.0% |
| ATTAGAGGTTACATGTTTCT+TGG | - | chr4_4:69991844-69991863 | Msa0699350:intron | 30.0% | |
| ! | TGGATTTAAAGTTCTCCTTA+AGG | - | chr4_4:69991946-69991965 | Msa0699350:CDS | 30.0% |
| TTGAATTGCTGAACATGAAA+AGG | + | chr4_4:69992107-69992126 | None:intergenic | 30.0% | |
| ! | AACACATTGAGCAAACTTTT+TGG | - | chr4_4:69992125-69992144 | Msa0699350:five_prime_UTR | 30.0% |
| ! | ACACATTGAGCAAACTTTTT+GGG | - | chr4_4:69992126-69992145 | Msa0699350:five_prime_UTR | 30.0% |
| CTTCACAAAAAAAGGAAAGT+AGG | + | chr4_4:69992282-69992301 | None:intergenic | 30.0% | |
| ! | TTCTCCCATTTTCGTTTCTT+AGG | - | chr4_4:69986601-69986620 | Msa0699350:three_prime_UTR | 35.0% |
| ! | TCTCCCATTTTCGTTTCTTA+GGG | - | chr4_4:69986602-69986621 | Msa0699350:three_prime_UTR | 35.0% |
| !! | CAATTAAGAGTACCGGAATA+TGG | - | chr4_4:69986692-69986711 | Msa0699350:CDS | 35.0% |
| !!! | CTCAATTTTTTCGTCAATGG+GGG | - | chr4_4:69986743-69986762 | Msa0699350:CDS | 35.0% |
| !! | TGATTGAATTCTGGTTCTCT+CGG | + | chr4_4:69986973-69986992 | None:intergenic | 35.0% |
| GCAACTATGTGATTGAATTC+TGG | + | chr4_4:69986982-69987001 | None:intergenic | 35.0% | |
| ! | CTTTACCACATATGCACTTT+TGG | - | chr4_4:69987079-69987098 | Msa0699350:intron | 35.0% |
| TGCTGTGGTTTATGTTATTC+AGG | - | chr4_4:69987294-69987313 | Msa0699350:intron | 35.0% | |
| !!! | AGTAACAGTTTTCTGGGATT+GGG | + | chr4_4:69987590-69987609 | None:intergenic | 35.0% |
| CACAACAGCAATTTCTAAGT+TGG | + | chr4_4:69987727-69987746 | None:intergenic | 35.0% | |
| ! | CTTAGAAATTGCTGTTGTGA+AGG | - | chr4_4:69987728-69987747 | Msa0699350:CDS | 35.0% |
| CTGTGTGTATAGGATATATC+AGG | - | chr4_4:69987897-69987916 | Msa0699350:intron | 35.0% | |
| TGTTGACCTCACATTATAAC+TGG | - | chr4_4:69987988-69988007 | Msa0699350:intron | 35.0% | |
| GTTGACCTCACATTATAACT+GGG | - | chr4_4:69987989-69988008 | Msa0699350:intron | 35.0% | |
| TAACCAACTTCACCTTAAAC+AGG | - | chr4_4:69988026-69988045 | Msa0699350:intron | 35.0% | |
| TGGCAAATGTTTGGCAATTA+CGG | + | chr4_4:69988131-69988150 | None:intergenic | 35.0% | |
| GAGTCACAAGCAAATTCAAT+GGG | + | chr4_4:69988187-69988206 | None:intergenic | 35.0% | |
| AGAGTCACAAGCAAATTCAA+TGG | + | chr4_4:69988188-69988207 | None:intergenic | 35.0% | |
| TAAAATTGAGTCATGGAGAC+TGG | + | chr4_4:69988383-69988402 | None:intergenic | 35.0% | |
| TGTACGTTGTACAATACAGA+CGG | - | chr4_4:69988494-69988513 | Msa0699350:intron | 35.0% | |
| ! | TGGATATTGTCTTTGGTGTA+AGG | + | chr4_4:69988629-69988648 | None:intergenic | 35.0% |
| GTATGTGTGGATATTGTCTT+TGG | + | chr4_4:69988636-69988655 | None:intergenic | 35.0% | |
| AAAAACTTTGTCCCTTACAC+TGG | - | chr4_4:69988697-69988716 | Msa0699350:intron | 35.0% | |
| CACTGTTTAGATAGCAGATT+AGG | + | chr4_4:69988724-69988743 | None:intergenic | 35.0% | |
| !! | TTTTCTCCGGCTATTTTCTT+TGG | + | chr4_4:69988805-69988824 | None:intergenic | 35.0% |
| AAAGAAAATAGCCGGAGAAA+AGG | - | chr4_4:69988804-69988823 | Msa0699350:intron | 35.0% | |
| !!! | ATTTCTAGTGACCTTTTCTC+CGG | + | chr4_4:69988818-69988837 | None:intergenic | 35.0% |
| !! | AGGAATTTTTGGATCTGCTA+GGG | + | chr4_4:69988841-69988860 | None:intergenic | 35.0% |
| !! | AAGGAATTTTTGGATCTGCT+AGG | + | chr4_4:69988842-69988861 | None:intergenic | 35.0% |
| AAAAATTCCTTGAAAGTCGC+CGG | - | chr4_4:69988851-69988870 | Msa0699350:intron | 35.0% | |
| CAGAAGTGAAAAATGGCAAA+AGG | - | chr4_4:69988960-69988979 | Msa0699350:intron | 35.0% | |
| AAAGGCTTAAATCATAGTGC+TGG | - | chr4_4:69989018-69989037 | Msa0699350:intron | 35.0% | |
| AGGCTAAGCAATGCATTATT+GGG | + | chr4_4:69989125-69989144 | None:intergenic | 35.0% | |
| AATAGCATCAGTTAGAAGAC+TGG | + | chr4_4:69989162-69989181 | None:intergenic | 35.0% | |
| ACTATGAACAGTTGATCACT+TGG | - | chr4_4:69989184-69989203 | Msa0699350:intron | 35.0% | |
| !!! | TAGTTAGGCTGTTGGTTTTA+TGG | + | chr4_4:69989627-69989646 | None:intergenic | 35.0% |
| TAAAACCAACAGCCTAACTA+CGG | - | chr4_4:69989627-69989646 | Msa0699350:intron | 35.0% | |
| ATAACAAAGGTCAAAGACAG+AGG | + | chr4_4:69989739-69989758 | None:intergenic | 35.0% | |
| AGTAAATGGCTCAGTTAATC+CGG | + | chr4_4:69989791-69989810 | None:intergenic | 35.0% | |
| GAGTTATAAAGGGGAAAAAG+TGG | + | chr4_4:69989889-69989908 | None:intergenic | 35.0% | |
| AATAAGTGTGAAATGAGCCA+AGG | - | chr4_4:69989979-69989998 | Msa0699350:intron | 35.0% | |
| ATAAGTGTGAAATGAGCCAA+GGG | - | chr4_4:69989980-69989999 | Msa0699350:intron | 35.0% | |
| ! | CTTTGTGGTTGATATTATGG+TGG | - | chr4_4:69990154-69990173 | Msa0699350:intron | 35.0% |
| TTATCGAAGATGTTCTTTGC+AGG | - | chr4_4:69990201-69990220 | Msa0699350:intron | 35.0% | |
| TCAACTGCATTTGATGTGTT+TGG | - | chr4_4:69990396-69990415 | Msa0699350:intron | 35.0% | |
| CATTTGATGTGTTTGGACTT+TGG | - | chr4_4:69990403-69990422 | Msa0699350:intron | 35.0% | |
| TTGAATGGAATTAATGCACC+TGG | - | chr4_4:69990430-69990449 | Msa0699350:intron | 35.0% | |
| TGAATGGAATTAATGCACCT+GGG | - | chr4_4:69990431-69990450 | Msa0699350:intron | 35.0% | |
| !!! | TGACTGTTATTTTGTAACCC+AGG | + | chr4_4:69990451-69990470 | None:intergenic | 35.0% |
| TAAGTTCTTGAAACCTATGC+TGG | - | chr4_4:69990549-69990568 | Msa0699350:intron | 35.0% | |
| CAATTTCAGAAAACCAGCAT+AGG | + | chr4_4:69990565-69990584 | None:intergenic | 35.0% | |
| TATTCTGTACAGAGCCTAAA+TGG | + | chr4_4:69990651-69990670 | None:intergenic | 35.0% | |
| AAATACTCAGGGAAAAGGAA+AGG | + | chr4_4:69990912-69990931 | None:intergenic | 35.0% | |
| AAAGAGCAGGTAAATACTCA+GGG | + | chr4_4:69990923-69990942 | None:intergenic | 35.0% | |
| CTTCCTTATCAGATGTGTTA+TGG | - | chr4_4:69990984-69991003 | Msa0699350:intron | 35.0% | |
| ATCAGATGTGTTATGGTTAG+TGG | - | chr4_4:69990991-69991010 | Msa0699350:intron | 35.0% | |
| TGTAGAAAAAATTCAGGCAG+GGG | + | chr4_4:69991255-69991274 | None:intergenic | 35.0% | |
| GTTGTAGAAAAAATTCAGGC+AGG | + | chr4_4:69991257-69991276 | None:intergenic | 35.0% | |
| TCCCTAACAATATGAATTGG+AGG | + | chr4_4:69991440-69991459 | None:intergenic | 35.0% | |
| CCAAGAGAAAATTTCTCAGT+CGG | + | chr4_4:69991481-69991500 | None:intergenic | 35.0% | |
| ! | CGACTGAGAAATTTTCTCTT+GGG | - | chr4_4:69991479-69991498 | Msa0699350:intron | 35.0% |
| TCTCTTGGGAAATGGTTAAT+TGG | - | chr4_4:69991493-69991512 | Msa0699350:intron | 35.0% | |
| ! | GGAAATTATTTGCTGCTATG+AGG | - | chr4_4:69991538-69991557 | Msa0699350:intron | 35.0% |
| ! | TCTTACATTTTTGCTGCAGT+TGG | - | chr4_4:69991698-69991717 | Msa0699350:intron | 35.0% |
| GGAAATATTGCCTTCTTCTT+TGG | - | chr4_4:69991722-69991741 | Msa0699350:intron | 35.0% | |
| ATGAAAAGGACCAAAGAAGA+AGG | + | chr4_4:69991735-69991754 | None:intergenic | 35.0% | |
| ! | CTTTGGTCCTTTTCATTTTG+AGG | - | chr4_4:69991739-69991758 | Msa0699350:CDS | 35.0% |
| GTAGCTTCCTCAAAATGAAA+AGG | + | chr4_4:69991749-69991768 | None:intergenic | 35.0% | |
| ! | CCATAATCTTTTCAGCGAAT+TGG | + | chr4_4:69991801-69991820 | None:intergenic | 35.0% |
| CCAATTCGCTGAAAAGATTA+TGG | - | chr4_4:69991798-69991817 | Msa0699350:CDS | 35.0% | |
| ! | ACTCCAAGGATAATTTCTAG+AGG | - | chr4_4:69991877-69991896 | Msa0699350:intron | 35.0% |
| ! | TGTCCTCTAGAAATTATCCT+TGG | + | chr4_4:69991883-69991902 | None:intergenic | 35.0% |
| CTCACTCGACATACAAAATA+CGG | + | chr4_4:69991913-69991932 | None:intergenic | 35.0% | |
| ! | ATATGGATTGTCAAACGTGT+TGG | - | chr4_4:69991994-69992013 | Msa0699350:CDS | 35.0% |
| ! | TATGGATTGTCAAACGTGTT+GGG | - | chr4_4:69991995-69992014 | Msa0699350:CDS | 35.0% |
| CATTGTCTATGGGAAAATGT+CGG | - | chr4_4:69992079-69992098 | Msa0699350:five_prime_UTR | 35.0% | |
| ATTCCTGTAACTGTTACAAG+TGG | - | chr4_4:69992196-69992215 | Msa0699350:five_prime_UTR | 35.0% | |
| TTCCTGTAACTGTTACAAGT+GGG | - | chr4_4:69992197-69992216 | Msa0699350:five_prime_UTR | 35.0% | |
| CGGCGATGGAGAAATAATTT+GGG | + | chr4_4:69986204-69986223 | None:intergenic | 40.0% | |
| ! | CCAAATTATTTCTCCATCGC+CGG | - | chr4_4:69986202-69986221 | Msa0699350:three_prime_UTR | 40.0% |
| !! | TAAGAGTACCGGAATATGGT+TGG | - | chr4_4:69986696-69986715 | Msa0699350:CDS | 40.0% |
| CAATGAGATGTTCATACCTC+TGG | + | chr4_4:69986913-69986932 | None:intergenic | 40.0% | |
| GTGGTAAAGAAAGCAAGACT+TGG | + | chr4_4:69987068-69987087 | None:intergenic | 40.0% | |
| !!! | ATGCACTTTTGGTGCTCTTT+TGG | - | chr4_4:69987090-69987109 | Msa0699350:intron | 40.0% |
| !!! | TGCACTTTTGGTGCTCTTTT+GGG | - | chr4_4:69987091-69987110 | Msa0699350:intron | 40.0% |
| TTGGGCTGAGATTTATTACC+AGG | - | chr4_4:69987109-69987128 | Msa0699350:intron | 40.0% | |
| TTGACCACAAGTGCAATCAT+GGG | + | chr4_4:69987332-69987351 | None:intergenic | 40.0% | |
| TTTGACCACAAGTGCAATCA+TGG | + | chr4_4:69987333-69987352 | None:intergenic | 40.0% | |
| !!! | TCGTGTGTAACCTTTTTCGA+CGG | - | chr4_4:69987490-69987509 | Msa0699350:intron | 40.0% |
| ATCTGACAAAGGAACCTACT+GGG | + | chr4_4:69987528-69987547 | None:intergenic | 40.0% | |
| CAACTTGTCAGATCTGACAA+AGG | + | chr4_4:69987539-69987558 | None:intergenic | 40.0% | |
| !!! | GTAACAGTTTTCTGGGATTG+GGG | + | chr4_4:69987589-69987608 | None:intergenic | 40.0% |
| !!! | CAGTAACAGTTTTCTGGGAT+TGG | + | chr4_4:69987591-69987610 | None:intergenic | 40.0% |
| ! | CTGAGCAGTAACAGTTTTCT+GGG | + | chr4_4:69987596-69987615 | None:intergenic | 40.0% |
| GCAACAACCTCTTTATCCTT+TGG | + | chr4_4:69987697-69987716 | None:intergenic | 40.0% | |
| GTTGTGAAGGAGTTTCTCTT+AGG | - | chr4_4:69987741-69987760 | Msa0699350:CDS | 40.0% | |
| !! | TACTGTTGGGTTTGATGATG+AGG | - | chr4_4:69987779-69987798 | Msa0699350:intron | 40.0% |
| !! | TACTCTTTGAGTTCTGGCTT+AGG | - | chr4_4:69987810-69987829 | Msa0699350:intron | 40.0% |
| !! | TTCTGGCTTAGGATTGTCTT+TGG | - | chr4_4:69987821-69987840 | Msa0699350:intron | 40.0% |
| GAACTAGAAGCTTTCATTGC+TGG | + | chr4_4:69987860-69987879 | None:intergenic | 40.0% | |
| TATACACACAGAGATCAGAG+GGG | + | chr4_4:69987888-69987907 | None:intergenic | 40.0% | |
| CTATACACACAGAGATCAGA+GGG | + | chr4_4:69987889-69987908 | None:intergenic | 40.0% | |
| TCAATTCAGGATTGTCTGAC+CGG | + | chr4_4:69987966-69987985 | None:intergenic | 40.0% | |
| ! | TACATGGTTTGGCCTGTTTA+AGG | + | chr4_4:69988041-69988060 | None:intergenic | 40.0% |
| AAGAAGTCTACGACTCTACA+TGG | + | chr4_4:69988057-69988076 | None:intergenic | 40.0% | |
| GGCAAATGTTTGGCAATTAC+GGG | + | chr4_4:69988130-69988149 | None:intergenic | 40.0% | |
| CCAGAAAATTTCAAGACAGG+TGG | + | chr4_4:69988258-69988277 | None:intergenic | 40.0% | |
| ! | CCACCTGTCTTGAAATTTTC+TGG | - | chr4_4:69988255-69988274 | Msa0699350:intron | 40.0% |
| CTACCAAAAGTAGGTGTTTG+AGG | - | chr4_4:69988443-69988462 | Msa0699350:intron | 40.0% | |
| ! | GCACTTGTTCTGAATATGTG+CGG | - | chr4_4:69988465-69988484 | Msa0699350:intron | 40.0% |
| GTACGTTGTACAATACAGAC+GGG | - | chr4_4:69988495-69988514 | Msa0699350:intron | 40.0% | |
| CAATACAGACGGGAAAAAGA+TGG | - | chr4_4:69988505-69988524 | Msa0699350:intron | 40.0% | |
| TATGTAGCAGTGTTGTCTAG+TGG | + | chr4_4:69988581-69988600 | None:intergenic | 40.0% | |
| GCATGAATATGTGTGGCAAT+AGG | + | chr4_4:69988607-69988626 | None:intergenic | 40.0% | |
| GTGTAAGGCATGAATATGTG+TGG | + | chr4_4:69988614-69988633 | None:intergenic | 40.0% | |
| ! | GGCGACTTTCAAGGAATTTT+TGG | + | chr4_4:69988852-69988871 | None:intergenic | 40.0% |
| AAAATTCCTTGAAAGTCGCC+GGG | - | chr4_4:69988852-69988871 | Msa0699350:intron | 40.0% | |
| CTGTTGAATAAAACAGTGCC+CGG | + | chr4_4:69988873-69988892 | None:intergenic | 40.0% | |
| ! | TGCGCATGAGTTTTCTATCT+GGG | + | chr4_4:69988942-69988961 | None:intergenic | 40.0% |
| TCATGCGCAGAAGTGAAAAA+TGG | - | chr4_4:69988953-69988972 | Msa0699350:intron | 40.0% | |
| TCGAGCCAAATTACACTGAA+AGG | - | chr4_4:69989000-69989019 | Msa0699350:intron | 40.0% | |
| AATGCATTATTGGGTGACTG+GGG | + | chr4_4:69989116-69989135 | None:intergenic | 40.0% | |
| CAATGCATTATTGGGTGACT+GGG | + | chr4_4:69989117-69989136 | None:intergenic | 40.0% | |
| GAGGCTAAGCAATGCATTAT+TGG | + | chr4_4:69989126-69989145 | None:intergenic | 40.0% | |
| !!! | GAAGTTTTAGGAAGTCAGCA+AGG | + | chr4_4:69989216-69989235 | None:intergenic | 40.0% |
| !! | TGACAGGCGTTTGAAGTTTT+AGG | + | chr4_4:69989228-69989247 | None:intergenic | 40.0% |
| CTATCTGTTCTGCAGTGTTA+AGG | + | chr4_4:69989419-69989438 | None:intergenic | 40.0% | |
| GCAGAACAGATAGACATTGA+AGG | - | chr4_4:69989426-69989445 | Msa0699350:intron | 40.0% | |
| GAACAGATAGACATTGAAGG+TGG | - | chr4_4:69989429-69989448 | Msa0699350:intron | 40.0% | |
| !!! | GCTGTTGGTTTTATGGTTAG+TGG | + | chr4_4:69989620-69989639 | None:intergenic | 40.0% |
| ! | CATCGATTGTTTCCGTAGTT+AGG | + | chr4_4:69989642-69989661 | None:intergenic | 40.0% |
| GTAAATGGCTCAGTTAATCC+GGG | + | chr4_4:69989790-69989809 | None:intergenic | 40.0% | |
| TCCTGAATTAATTGAGCCCT+TGG | + | chr4_4:69989999-69990018 | None:intergenic | 40.0% | |
| AGGGCTCAATTAATTCAGGA+CGG | - | chr4_4:69989999-69990018 | Msa0699350:intron | 40.0% | |
| CTCAATTAATTCAGGACGGA+GGG | - | chr4_4:69990003-69990022 | Msa0699350:intron | 40.0% | |
| TCGATAAAATCACCAGCATG+CGG | + | chr4_4:69990188-69990207 | None:intergenic | 40.0% | |
| ! | TCATTTTGTGTGTTTGGACC+AGG | - | chr4_4:69990246-69990265 | Msa0699350:intron | 40.0% |
| ! | CATTTTGTGTGTTTGGACCA+GGG | - | chr4_4:69990247-69990266 | Msa0699350:intron | 40.0% |
| ! | ATTTTGTGTGTTTGGACCAG+GGG | - | chr4_4:69990248-69990267 | Msa0699350:intron | 40.0% |
| AGACCCCTACATACATGTAT+AGG | + | chr4_4:69990316-69990335 | None:intergenic | 40.0% | |
| ACCATAGAGTAGAAAGCCAA+GGG | + | chr4_4:69990351-69990370 | None:intergenic | 40.0% | |
| CTATGGTCAGTGTTCCATTT+AGG | - | chr4_4:69990634-69990653 | Msa0699350:intron | 40.0% | |
| TCATAGATCACGCACAGAAA+AGG | + | chr4_4:69990758-69990777 | None:intergenic | 40.0% | |
| CGCTTTCCTGTTGAATCTAA+AGG | - | chr4_4:69990800-69990819 | Msa0699350:intron | 40.0% | |
| CAGGTAAATACTCAGGGAAA+AGG | + | chr4_4:69990917-69990936 | None:intergenic | 40.0% | |
| GAAAGAGCAGGTAAATACTC+AGG | + | chr4_4:69990924-69990943 | None:intergenic | 40.0% | |
| TTACCTGCTCTTTCTAATGC+AGG | - | chr4_4:69990930-69990949 | Msa0699350:intron | 40.0% | |
| GAATGTCAGCTTTCAACAGT+GGG | + | chr4_4:69991233-69991252 | None:intergenic | 40.0% | |
| !! | TGAAGCTAGTCTTGGATTCT+TGG | - | chr4_4:69991337-69991356 | Msa0699350:intron | 40.0% |
| !! | CTAGTCTTGGATTCTTGGTA+AGG | - | chr4_4:69991342-69991361 | Msa0699350:intron | 40.0% |
| ! | CCGACTGAGAAATTTTCTCT+TGG | - | chr4_4:69991478-69991497 | Msa0699350:intron | 40.0% |
| GTGTTTGTTCATCGTGCTAT+AGG | - | chr4_4:69991648-69991667 | Msa0699350:intron | 40.0% | |
| ! | TACATTTTTGCTGCAGTTGG+TGG | - | chr4_4:69991701-69991720 | Msa0699350:intron | 40.0% |
| ATGGCGAAAACTTAGTCATG+AGG | - | chr4_4:69991817-69991836 | Msa0699350:intron | 40.0% | |
| ! | TAGTCATGAGGCATCATTAG+AGG | - | chr4_4:69991829-69991848 | Msa0699350:intron | 40.0% |
| GAGTGAGAGAGCTAATATCT+TGG | - | chr4_4:69991926-69991945 | Msa0699350:CDS | 40.0% | |
| !! | TTGAGCAAACTTTTTGGGAG+AGG | - | chr4_4:69992131-69992150 | Msa0699350:five_prime_UTR | 40.0% |
| CCGGCGATGGAGAAATAATT+TGG | + | chr4_4:69986205-69986224 | None:intergenic | 45.0% | |
| !!! | GTTGGGTTTTGTTTTGTGGC+CGG | + | chr4_4:69986224-69986243 | None:intergenic | 45.0% |
| GGATGTTTCCGTGAAGTCAA+GGG | + | chr4_4:69986478-69986497 | None:intergenic | 45.0% | |
| TGGATGTTTCCGTGAAGTCA+AGG | + | chr4_4:69986479-69986498 | None:intergenic | 45.0% | |
| ACTTCACGGAAACATCCAAC+TGG | - | chr4_4:69986481-69986500 | Msa0699350:three_prime_UTR | 45.0% | |
| ACATCAACAACTCTCCTCTC+TGG | - | chr4_4:69986511-69986530 | Msa0699350:three_prime_UTR | 45.0% | |
| AAAGTGAAAGACCTTCTGCG+TGG | + | chr4_4:69986723-69986742 | None:intergenic | 45.0% | |
| ATACCTCTGGCTGTAACTTC+TGG | + | chr4_4:69986900-69986919 | None:intergenic | 45.0% | |
| CAAGACTTGGCATGTCAAGT+AGG | + | chr4_4:69987055-69987074 | None:intergenic | 45.0% | |
| ! | GAGCACCAAAAGTGCATATG+TGG | + | chr4_4:69987087-69987106 | None:intergenic | 45.0% |
| GAAACTTGGTCTCAGACCAT+CGG | + | chr4_4:69987263-69987282 | None:intergenic | 45.0% | |
| !!! | CGTGTGTAACCTTTTTCGAC+GGG | - | chr4_4:69987491-69987510 | Msa0699350:intron | 45.0% |
| GATCTGACAAAGGAACCTAC+TGG | + | chr4_4:69987529-69987548 | None:intergenic | 45.0% | |
| ! | GCTGAGCAGTAACAGTTTTC+TGG | + | chr4_4:69987597-69987616 | None:intergenic | 45.0% |
| !! | GGTTTGATGATGAGGCTGAT+GGG | - | chr4_4:69987787-69987806 | Msa0699350:intron | 45.0% |
| ! | GATGGGTACTCTTTGAGTTC+TGG | - | chr4_4:69987804-69987823 | Msa0699350:intron | 45.0% |
| CCTATACACACAGAGATCAG+AGG | + | chr4_4:69987890-69987909 | None:intergenic | 45.0% | |
| CCTCTGATCTCTGTGTGTAT+AGG | - | chr4_4:69987887-69987906 | Msa0699350:intron | 45.0% | |
| TGAGGTCAACAGCTCAATTC+AGG | + | chr4_4:69987979-69987998 | None:intergenic | 45.0% | |
| ! | TGGCCTGTTTAAGGTGAAGT+TGG | + | chr4_4:69988032-69988051 | None:intergenic | 45.0% |
| GTCTACGACTCTACATGGTT+TGG | + | chr4_4:69988052-69988071 | None:intergenic | 45.0% | |
| ! | GTGCCTCAAACACCTACTTT+TGG | + | chr4_4:69988449-69988468 | None:intergenic | 45.0% |
| ATGTTAAGTGGTGAGCGTTC+AGG | + | chr4_4:69988658-69988677 | None:intergenic | 45.0% | |
| GCAGATTAGGACCAGTGTAA+GGG | + | chr4_4:69988711-69988730 | None:intergenic | 45.0% | |
| AGCAGATTAGGACCAGTGTA+AGG | + | chr4_4:69988712-69988731 | None:intergenic | 45.0% | |
| AGCTGCTAGACAACCTTTCT+TGG | - | chr4_4:69988900-69988919 | Msa0699350:intron | 45.0% | |
| ! | CATGAGTTTTCTATCTGGGC+TGG | + | chr4_4:69988938-69988957 | None:intergenic | 45.0% |
| ! | CTGCGCATGAGTTTTCTATC+TGG | + | chr4_4:69988943-69988962 | None:intergenic | 45.0% |
| ! | TGTGTCGGTGAACAAACACA+TGG | + | chr4_4:69989051-69989070 | None:intergenic | 45.0% |
| ! | AAATGGTTGGGAAGGTGTGT+CGG | + | chr4_4:69989066-69989085 | None:intergenic | 45.0% |
| GCAATGCATTATTGGGTGAC+TGG | + | chr4_4:69989118-69989137 | None:intergenic | 45.0% | |
| AGCATCAGTTAGAAGACTGG+TGG | + | chr4_4:69989159-69989178 | None:intergenic | 45.0% | |
| TGTTTCCGTAGTTAGGCTGT+TGG | + | chr4_4:69989635-69989654 | None:intergenic | 45.0% | |
| GCCAAGGGCTCAATTAATTC+AGG | - | chr4_4:69989995-69990014 | Msa0699350:intron | 45.0% | |
| GCTCAATTAATTCAGGACGG+AGG | - | chr4_4:69990002-69990021 | Msa0699350:intron | 45.0% | |
| CACCATAGAGTAGAAAGCCA+AGG | + | chr4_4:69990352-69990371 | None:intergenic | 45.0% | |
| ! | CTTGGCTTTCTACTCTATGG+TGG | - | chr4_4:69990350-69990369 | Msa0699350:intron | 45.0% |
| ! | GCTTTCTACTCTATGGTGGA+AGG | - | chr4_4:69990354-69990373 | Msa0699350:intron | 45.0% |
| ACAGTGGGTATGGTGATCAA+AGG | + | chr4_4:69990734-69990753 | None:intergenic | 45.0% | |
| ! | CAGAAAAGGTACAGTGGGTA+TGG | + | chr4_4:69990744-69990763 | None:intergenic | 45.0% |
| ! | ACGCACAGAAAAGGTACAGT+GGG | + | chr4_4:69990749-69990768 | None:intergenic | 45.0% |
| CGACGACCTTTAGATTCAAC+AGG | + | chr4_4:69990809-69990828 | None:intergenic | 45.0% | |
| AGGGAAAAGGAAAGGAGAGA+GGG | + | chr4_4:69990904-69990923 | None:intergenic | 45.0% | |
| CAACCTGCATTAGAAAGAGC+AGG | + | chr4_4:69990936-69990955 | None:intergenic | 45.0% | |
| CTGCTCTTTCTAATGCAGGT+TGG | - | chr4_4:69990934-69990953 | Msa0699350:intron | 45.0% | |
| TGGGATGGTTCAAGACATCA+AGG | + | chr4_4:69991121-69991140 | None:intergenic | 45.0% | |
| GGAATGTCAGCTTTCAACAG+TGG | + | chr4_4:69991234-69991253 | None:intergenic | 45.0% | |
| ! | GTGCGATTTGAAGCTAGTCT+TGG | - | chr4_4:69991329-69991348 | Msa0699350:intron | 45.0% |
| TACTGTGTGATACCTCGCTT+AGG | + | chr4_4:69991774-69991793 | None:intergenic | 45.0% | |
| ! | TTGGATGTTTCTGCACTCCA+AGG | - | chr4_4:69991863-69991882 | Msa0699350:intron | 45.0% |
| CACCCACTTGTAACAGTTAC+AGG | + | chr4_4:69992202-69992221 | None:intergenic | 45.0% | |
| CTGTAACTGTTACAAGTGGG+TGG | - | chr4_4:69992200-69992219 | Msa0699350:five_prime_UTR | 45.0% | |
| !! | AAAAAATCAATAAATAAAAT+TGG | + | chr4_4:69986640-69986659 | None:intergenic | 5.0% |
| !!! | ATAATTTTTAATAAATTATG+TGG | + | chr4_4:69989706-69989725 | None:intergenic | 5.0% |
| !!! | TTTTGTTTTGTGGCCGGCGA+TGG | + | chr4_4:69986218-69986237 | None:intergenic | 50.0% |
| TGTTTCCGTGAAGTCAAGGG+CGG | + | chr4_4:69986475-69986494 | None:intergenic | 50.0% | |
| TCACGGAAACATCCAACTGG+TGG | - | chr4_4:69986484-69986503 | Msa0699350:three_prime_UTR | 50.0% | |
| GTTGATGTCTCTCCACCAGT+TGG | + | chr4_4:69986499-69986518 | None:intergenic | 50.0% | |
| TAGCGAGGAGGTGGAAGATA+CGG | + | chr4_4:69986542-69986561 | None:intergenic | 50.0% | |
| TTCCATAGAGGATAGCGAGG+AGG | + | chr4_4:69986554-69986573 | None:intergenic | 50.0% | |
| CGATTCCATAGAGGATAGCG+AGG | + | chr4_4:69986557-69986576 | None:intergenic | 50.0% | |
| AAAACGAACCAGAGCGATGG+CGG | + | chr4_4:69986583-69986602 | None:intergenic | 50.0% | |
| GAGAAAACGAACCAGAGCGA+TGG | + | chr4_4:69986586-69986605 | None:intergenic | 50.0% | |
| TGCGTGGTCCAACCATATTC+CGG | + | chr4_4:69986707-69986726 | None:intergenic | 50.0% | |
| ATATGGTTGGACCACGCAGA+AGG | - | chr4_4:69986709-69986728 | Msa0699350:CDS | 50.0% | |
| GTAACTTCTGGACATCTCGC+CGG | + | chr4_4:69986888-69986907 | None:intergenic | 50.0% | |
| TGTCCAGAAGTTACAGCCAG+AGG | - | chr4_4:69986894-69986913 | Msa0699350:intron | 50.0% | |
| CTTGCCCATGATTGCACTTG+TGG | - | chr4_4:69987325-69987344 | Msa0699350:intron | 50.0% | |
| CTTAGAGCTCCCGTCGAAAA+AGG | + | chr4_4:69987503-69987522 | None:intergenic | 50.0% | |
| AGGACACATGGACAGATGGA+GGG | + | chr4_4:69987565-69987584 | None:intergenic | 50.0% | |
| AAGGACACATGGACAGATGG+AGG | + | chr4_4:69987566-69987585 | None:intergenic | 50.0% | |
| !!! | CAGTTTTCTGGGATTGGGGA+AGG | + | chr4_4:69987585-69987604 | None:intergenic | 50.0% |
| !! | GGGTTTGATGATGAGGCTGA+TGG | - | chr4_4:69987786-69987805 | Msa0699350:intron | 50.0% |
| TCATTGCTGGTCGCACATGT+TGG | + | chr4_4:69987847-69987866 | None:intergenic | 50.0% | |
| CGGGAAAAAGATGGAGTCAG+AGG | - | chr4_4:69988514-69988533 | Msa0699350:intron | 50.0% | |
| !! | CTGGTGGCTTTGGTATGTTC+TGG | + | chr4_4:69988754-69988773 | None:intergenic | 50.0% |
| ! | ATTGACTTCTTGGGGCTGAC+TGG | + | chr4_4:69988773-69988792 | None:intergenic | 50.0% |
| AAGGTTGTCTAGCAGCTTGC+AGG | + | chr4_4:69988897-69988916 | None:intergenic | 50.0% | |
| !! | GTGCGTTTCTGGTCCAAGAA+AGG | + | chr4_4:69988916-69988935 | None:intergenic | 50.0% |
| CTTCAAACGCCTGTCACTGT+AGG | - | chr4_4:69989232-69989251 | Msa0699350:intron | 50.0% | |
| ATTCTATACTCCCTCCGTCC+CGG | - | chr4_4:69989769-69989788 | Msa0699350:intron | 50.0% | |
| ATGGCTCAGTTAATCCGGGA+CGG | + | chr4_4:69989786-69989805 | None:intergenic | 50.0% | |
| AAAATCACCAGCATGCGGAC+AGG | + | chr4_4:69990183-69990202 | None:intergenic | 50.0% | |
| CAGATCTGATAGTTGACCCC+TGG | + | chr4_4:69990267-69990286 | None:intergenic | 50.0% | |
| ! | GTCTCTTTGTTTGCAGCCCT+TGG | - | chr4_4:69990332-69990351 | Msa0699350:intron | 50.0% |
| ! | GCCCTTGGCTTTCTACTCTA+TGG | - | chr4_4:69990347-69990366 | Msa0699350:intron | 50.0% |
| ! | CACGCACAGAAAAGGTACAG+TGG | + | chr4_4:69990750-69990769 | None:intergenic | 50.0% |
| TCGTCGCAAGAAGCTACAAG+AGG | - | chr4_4:69990823-69990842 | Msa0699350:intron | 50.0% | |
| GGAAAGGAGAGAGGGATGAA+CGG | + | chr4_4:69990896-69990915 | None:intergenic | 50.0% | |
| CAGGGAAAAGGAAAGGAGAG+AGG | + | chr4_4:69990905-69990924 | None:intergenic | 50.0% | |
| TGTGTGATACCTCGCTTAGG+CGG | + | chr4_4:69991771-69991790 | None:intergenic | 50.0% | |
| AGCGATTCGATGGTGACCAG+AGG | - | chr4_4:69986417-69986436 | Msa0699350:three_prime_UTR | 55.0% | |
| CAACAACTCTCCTCTCTGGC+AGG | - | chr4_4:69986515-69986534 | Msa0699350:three_prime_UTR | 55.0% | |
| AAGATACGGTCCTGCCAGAG+AGG | + | chr4_4:69986528-69986547 | None:intergenic | 55.0% | |
| CATAGAGGATAGCGAGGAGG+TGG | + | chr4_4:69986551-69986570 | None:intergenic | 55.0% | |
| CACCTCCTCGCTATCCTCTA+TGG | - | chr4_4:69986549-69986568 | Msa0699350:three_prime_UTR | 55.0% | |
| GCACGAGCTGTATCTACCGA+TGG | - | chr4_4:69987244-69987263 | Msa0699350:intron | 55.0% | |
| !! | GGGAGCTCTAAGATCCCAGT+AGG | - | chr4_4:69987511-69987530 | Msa0699350:CDS | 55.0% |
| GGACACATGGACAGATGGAG+GGG | + | chr4_4:69987564-69987583 | None:intergenic | 55.0% | |
| GGGAAGGACACATGGACAGA+TGG | + | chr4_4:69987569-69987588 | None:intergenic | 55.0% | |
| TGGGATTGGGGAAGGACACA+TGG | + | chr4_4:69987577-69987596 | None:intergenic | 55.0% | |
| GGTGAGCGTTCAGGTATGTG+TGG | + | chr4_4:69988649-69988668 | None:intergenic | 55.0% | |
| !! | TATCTGGGCTGGTGCGTTTC+TGG | + | chr4_4:69988927-69988946 | None:intergenic | 55.0% |
| CTCAGTTAATCCGGGACGGA+GGG | + | chr4_4:69989782-69989801 | None:intergenic | 55.0% | |
| GAAGTCAAGGGCGGTGACCA+CGG | + | chr4_4:69986466-69986485 | None:intergenic | 60.0% | |
| GGTCACCGCCCTTGACTTCA+CGG | - | chr4_4:69986467-69986486 | Msa0699350:three_prime_UTR | 60.0% | |
| TGGCGGCGACGATTCCATAG+AGG | + | chr4_4:69986566-69986585 | None:intergenic | 60.0% | |
| TTGGGGCTGACTGGTGGCTT+TGG | + | chr4_4:69988764-69988783 | None:intergenic | 60.0% | |
| GACTTCTTGGGGCTGACTGG+TGG | + | chr4_4:69988770-69988789 | None:intergenic | 60.0% | |
| ACAGTGCCCGGCGACTTTCA+AGG | + | chr4_4:69988861-69988880 | None:intergenic | 60.0% | |
| GACTGGTGGCAGCGTACATG+AGG | + | chr4_4:69989145-69989164 | None:intergenic | 60.0% | |
| GCATGGGAGCCTACAGTGAC+AGG | + | chr4_4:69989244-69989263 | None:intergenic | 60.0% | |
| GCTCAGTTAATCCGGGACGG+AGG | + | chr4_4:69989783-69989802 | None:intergenic | 60.0% | |
| GTGGAAACCTGTCCGCATGC+TGG | - | chr4_4:69990173-69990192 | Msa0699350:intron | 60.0% | |
| AGGAAGCTACCGCCTAAGCG+AGG | - | chr4_4:69991759-69991778 | Msa0699350:CDS | 60.0% | |
| ! | GATGGTGACCAGAGGCGTGC+CGG | - | chr4_4:69986425-69986444 | Msa0699350:three_prime_UTR | 65.0% |
| AATCGTCGCCGCCATCGCTC+TGG | - | chr4_4:69986572-69986591 | Msa0699350:three_prime_UTR | 65.0% | |
| ! | GGTGACCAGAGGCGTGCCGG+CGG | - | chr4_4:69986428-69986447 | Msa0699350:three_prime_UTR | 75.0% |
| ACGGCCATCACCGCCTCCGC+CGG | + | chr4_4:69986447-69986466 | None:intergenic | 75.0% | |
| !! | GACCAGAGGCGTGCCGGCGG+AGG | - | chr4_4:69986431-69986450 | Msa0699350:three_prime_UTR | 80.0% |
| !! | CAGAGGCGTGCCGGCGGAGG+CGG | - | chr4_4:69986434-69986453 | Msa0699350:three_prime_UTR | 80.0% |
| !! | CGTGCCGGCGGAGGCGGTGA+TGG | - | chr4_4:69986440-69986459 | Msa0699350:three_prime_UTR | 80.0% |
| !! | GGCGGAGGCGGTGATGGCCG+TGG | - | chr4_4:69986446-69986465 | Msa0699350:three_prime_UTR | 80.0% |
| ! | CGCCTCCGCCGGCACGCCTC+TGG | + | chr4_4:69986436-69986455 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 69986177 | 69992320 | 69986177 | ID=Msa0699350;Name=Msa0699350 |
| chr4_4 | mRNA | 69986177 | 69992320 | 69986177 | ID=Msa0699350-mRNA-1;Parent=Msa0699350;Name=Msa0699350-mRNA-1;_AED=0.09;_eAED=0.09;_QI=249|0.8|0.81|1|0.9|0.90|11|511|322 |
| chr4_4 | exon | 69986177 | 69986780 | 69986177 | ID=Msa0699350-mRNA-1:exon:21152;Parent=Msa0699350-mRNA-1 |
| chr4_4 | exon | 69987334 | 69987411 | 69987334 | ID=Msa0699350-mRNA-1:exon:21151;Parent=Msa0699350-mRNA-1 |
| chr4_4 | exon | 69987492 | 69987545 | 69987492 | ID=Msa0699350-mRNA-1:exon:21150;Parent=Msa0699350-mRNA-1 |
| chr4_4 | exon | 69987653 | 69987782 | 69987653 | ID=Msa0699350-mRNA-1:exon:21149;Parent=Msa0699350-mRNA-1 |
| chr4_4 | exon | 69988122 | 69988167 | 69988122 | ID=Msa0699350-mRNA-1:exon:21148;Parent=Msa0699350-mRNA-1 |
| chr4_4 | exon | 69988275 | 69988347 | 69988275 | ID=Msa0699350-mRNA-1:exon:21147;Parent=Msa0699350-mRNA-1 |
| chr4_4 | exon | 69991182 | 69991253 | 69991182 | ID=Msa0699350-mRNA-1:exon:21146;Parent=Msa0699350-mRNA-1 |
| chr4_4 | exon | 69991349 | 69991459 | 69991349 | ID=Msa0699350-mRNA-1:exon:21145;Parent=Msa0699350-mRNA-1 |
| chr4_4 | exon | 69991582 | 69991634 | 69991582 | ID=Msa0699350-mRNA-1:exon:21144;Parent=Msa0699350-mRNA-1 |
| chr4_4 | exon | 69991733 | 69991823 | 69991733 | ID=Msa0699350-mRNA-1:exon:21143;Parent=Msa0699350-mRNA-1 |
| chr4_4 | exon | 69991904 | 69992320 | 69991904 | ID=Msa0699350-mRNA-1:exon:21142;Parent=Msa0699350-mRNA-1 |
| chr4_4 | five_prime_UTR | 69992072 | 69992320 | 69992072 | ID=Msa0699350-mRNA-1:five_prime_utr;Parent=Msa0699350-mRNA-1 |
| chr4_4 | CDS | 69991904 | 69992071 | 69991904 | ID=Msa0699350-mRNA-1:cds;Parent=Msa0699350-mRNA-1 |
| chr4_4 | CDS | 69991733 | 69991823 | 69991733 | ID=Msa0699350-mRNA-1:cds;Parent=Msa0699350-mRNA-1 |
| chr4_4 | CDS | 69991582 | 69991634 | 69991582 | ID=Msa0699350-mRNA-1:cds;Parent=Msa0699350-mRNA-1 |
| chr4_4 | CDS | 69991349 | 69991459 | 69991349 | ID=Msa0699350-mRNA-1:cds;Parent=Msa0699350-mRNA-1 |
| chr4_4 | CDS | 69991182 | 69991253 | 69991182 | ID=Msa0699350-mRNA-1:cds;Parent=Msa0699350-mRNA-1 |
| chr4_4 | CDS | 69988275 | 69988347 | 69988275 | ID=Msa0699350-mRNA-1:cds;Parent=Msa0699350-mRNA-1 |
| chr4_4 | CDS | 69988122 | 69988167 | 69988122 | ID=Msa0699350-mRNA-1:cds;Parent=Msa0699350-mRNA-1 |
| chr4_4 | CDS | 69987653 | 69987782 | 69987653 | ID=Msa0699350-mRNA-1:cds;Parent=Msa0699350-mRNA-1 |
| chr4_4 | CDS | 69987492 | 69987545 | 69987492 | ID=Msa0699350-mRNA-1:cds;Parent=Msa0699350-mRNA-1 |
| chr4_4 | CDS | 69987334 | 69987411 | 69987334 | ID=Msa0699350-mRNA-1:cds;Parent=Msa0699350-mRNA-1 |
| chr4_4 | CDS | 69986688 | 69986780 | 69986688 | ID=Msa0699350-mRNA-1:cds;Parent=Msa0699350-mRNA-1 |
| chr4_4 | three_prime_UTR | 69986177 | 69986687 | 69986177 | ID=Msa0699350-mRNA-1:three_prime_utr;Parent=Msa0699350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
