Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562210 | XP_039684755.1 | 90.373 | 322 | 3 | 2 | 1 | 322 | 1 | 294 | 0.0 | 573 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562210 | sp|Q9ZUM2|TOM3_ARATH | 78.247 | 308 | 39 | 2 | 15 | 322 | 24 | 303 | 3.97e-175 | 489 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562210 | A0A396GMB7 | 90.373 | 322 | 3 | 2 | 1 | 322 | 1 | 294 | 0.0 | 573 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0562210 | Msa0616150 | 0.960918 | 4.202408e-119 | -8.615850e-47 |
| Msa0562210 | Msa0655550 | 0.936052 | 3.210798e-97 | -8.615850e-47 |
| Msa0562210 | Msa0699350 | 0.867276 | 1.542058e-65 | -8.615850e-47 |
| Msa0562210 | Msa1063390 | 0.802049 | 6.746995e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562210 | MtrunA17_Chr8g0375261 | 90.373 | 322 | 3 | 2 | 1 | 322 | 1 | 294 | 0.0 | 573 |
| Msa0562210 | MtrunA17_Chr1g0162201 | 77.377 | 305 | 41 | 2 | 18 | 322 | 21 | 297 | 2.02e-170 | 474 |
| Msa0562210 | MtrunA17_Chr4g0050391 | 52.443 | 307 | 118 | 2 | 16 | 322 | 11 | 289 | 1.56e-111 | 325 |
| Msa0562210 | MtrunA17_Chr2g0288191 | 52.881 | 295 | 106 | 3 | 28 | 322 | 23 | 284 | 7.09e-103 | 303 |
| Msa0562210 | MtrunA17_Chr4g0074691 | 51.316 | 304 | 120 | 2 | 19 | 322 | 3 | 278 | 1.47e-99 | 294 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562210 | AT2G02180.1 | 78.247 | 308 | 39 | 2 | 15 | 322 | 24 | 303 | 4.04e-176 | 489 |
| Msa0562210 | AT1G14530.2 | 75.466 | 322 | 50 | 3 | 1 | 322 | 1 | 293 | 1.04e-164 | 460 |
| Msa0562210 | AT1G14530.1 | 72.285 | 267 | 45 | 3 | 1 | 267 | 1 | 238 | 8.80e-137 | 388 |
| Msa0562210 | AT4G21790.1 | 53.628 | 317 | 114 | 3 | 6 | 322 | 8 | 291 | 6.08e-114 | 332 |
Find 115 sgRNAs with CRISPR-Local
Find 426 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAATATTGCCTTCTTCTT+TGG | 0.176525 | 4_1:-61841942 | Msa0562210:CDS |
| CTTTACCACATATGCACTTT+TGG | 0.209497 | 4_1:-61846582 | Msa0562210:CDS |
| TTATGAAACGTGACATTATA+TGG | 0.218123 | 4_1:-61841687 | Msa0562210:three_prime_UTR |
| CCGGCGATGGAGAAATAATT+TGG | 0.238093 | 4_1:+61847466 | None:intergenic |
| GCCCTTGGCTTTCTACTCTA+TGG | 0.238950 | 4_1:-61843316 | Msa0562210:CDS |
| TTGCTTTGTGGTTGATATTA+TGG | 0.254119 | 4_1:-61843512 | Msa0562210:CDS |
| TGCTGTGGTTTATGTTATTC+AGG | 0.265350 | 4_1:-61846367 | Msa0562210:intron |
| CACCCACTTGTAACAGTTAC+AGG | 0.267023 | 4_1:+61841464 | None:intergenic |
| ATTAGAGGTTACATGTTTCT+TGG | 0.269866 | 4_1:-61841820 | Msa0562210:three_prime_UTR |
| ATATATACTTGCATTGTCTA+TGG | 0.272928 | 4_1:-61841596 | Msa0562210:three_prime_UTR |
| GTCTCTTTGTTTGCAGCCCT+TGG | 0.301193 | 4_1:-61843331 | Msa0562210:CDS |
| CCAATTCGCTGAAAAGATTA+TGG | 0.308778 | 4_1:-61841866 | Msa0562210:exon |
| CTTCCTTATCAGATGTGTTA+TGG | 0.312187 | 4_1:-61842679 | Msa0562210:intron |
| CACCTCCTCGCTATCCTCTA+TGG | 0.348130 | 4_1:-61847112 | Msa0562210:CDS |
| CAGAGGCGTGCCGGCGGAGG+CGG | 0.361590 | 4_1:-61847227 | Msa0562210:CDS |
| AACTCACCAGGTAATATATA+AGG | 0.373101 | 4_1:+61842517 | None:intergenic |
| CAATTAAGAGTACCGGAATA+TGG | 0.377199 | 4_1:-61846969 | Msa0562210:CDS |
| TTCATAATCTACAAACCTTA+AGG | 0.381501 | 4_1:+61841703 | None:intergenic |
| TAGTCATGAGGCATCATTAG+AGG | 0.382208 | 4_1:-61841835 | Msa0562210:three_prime_UTR |
| CGCCTCCGCCGGCACGCCTC+TGG | 0.382989 | 4_1:+61847228 | None:intergenic |
| TGGATTTAAAGTTCTCCTTA+AGG | 0.383207 | 4_1:-61841718 | Msa0562210:three_prime_UTR |
| TTATCGAAGATGTTCTTTGC+AGG | 0.388311 | 4_1:-61843462 | Msa0562210:intron |
| CGACGACCTTTAGATTCAAC+AGG | 0.394329 | 4_1:+61842857 | None:intergenic |
| CTGGGCTGAGATTTATTACC+AGG | 0.400475 | 4_1:-61846552 | Msa0562210:CDS |
| TGCGTGGTCCAACCATATTC+CGG | 0.407251 | 4_1:+61846957 | None:intergenic |
| ATACCTCTGGCTGTAACTTC+TGG | 0.414708 | 4_1:+61846764 | None:intergenic |
| CGTGCCGGCGGAGGCGGTGA+TGG | 0.421128 | 4_1:-61847221 | Msa0562210:CDS |
| CGGCGATGGAGAAATAATTT+GGG | 0.426439 | 4_1:+61847467 | None:intergenic |
| CGCTTTCCTGTTGAATCTAA+AGG | 0.430705 | 4_1:-61842863 | Msa0562210:CDS |
| GACCAGAGGCGTGCCGGCGG+AGG | 0.438883 | 4_1:-61847230 | Msa0562210:CDS |
| CTCACTCGACATACAAAATA+CGG | 0.442818 | 4_1:+61841754 | None:intergenic |
| GGTCACCGCCCTTGACTTCA+CGG | 0.448418 | 4_1:-61847194 | Msa0562210:CDS |
| TTTAGATTAGCGAGAGATAA+CGG | 0.451599 | 4_1:+61847491 | None:intergenic |
| TATGGATTGTCAAACGTGTT+GGG | 0.454493 | 4_1:-61841669 | Msa0562210:three_prime_UTR |
| TCATAGATCACGCACAGAAA+AGG | 0.476640 | 4_1:+61842908 | None:intergenic |
| AAGGCTATGCTTATGTCAAA+AGG | 0.478912 | 4_1:+61841351 | None:intergenic |
| TAACCATAACACATCTGATA+AGG | 0.480348 | 4_1:+61842676 | None:intergenic |
| CCAAATTATTTCTCCATCGC+CGG | 0.481159 | 4_1:-61847466 | Msa0562210:five_prime_UTR |
| CATAGAGGATAGCGAGGAGG+TGG | 0.481655 | 4_1:+61847113 | None:intergenic |
| GTAATATATAAGGTTTAGAA+TGG | 0.488783 | 4_1:+61842527 | None:intergenic |
| AATCGTCGCCGCCATCGCTC+TGG | 0.496468 | 4_1:-61847089 | Msa0562210:intron |
| AAATGTTTCAGATTGCTTTG+TGG | 0.500624 | 4_1:-61843524 | Msa0562210:intron |
| CAGAAAAGGTACAGTGGGTA+TGG | 0.501417 | 4_1:+61842922 | None:intergenic |
| GCATTAATTGTGTAGAAACT+TGG | 0.501451 | 4_1:+61846387 | None:intergenic |
| GGCGGAGGCGGTGATGGCCG+TGG | 0.504979 | 4_1:-61847215 | Msa0562210:CDS |
| ATATGGATTGTCAAACGTGT+TGG | 0.508276 | 4_1:-61841670 | Msa0562210:three_prime_UTR |
| ACTTCACGGAAACATCCAAC+TGG | 0.511782 | 4_1:-61847180 | Msa0562210:CDS |
| GTAGCTTCCTCAAAATGAAA+AGG | 0.513962 | 4_1:+61841918 | None:intergenic |
| CAAAAGAAGTAAAACTTGCC+TGG | 0.520685 | 4_1:+61846534 | None:intergenic |
| TATATACTTGCATTGTCTAT+GGG | 0.520982 | 4_1:-61841595 | Msa0562210:three_prime_UTR |
| TAGAATACAATTAAGAGTAC+CGG | 0.522473 | 4_1:-61846976 | Msa0562210:CDS |
| ATGAAAAGGACCAAAGAAGA+AGG | 0.522475 | 4_1:+61841932 | None:intergenic |
| CAACAACTCTCCTCTCTGGC+AGG | 0.522527 | 4_1:-61847146 | Msa0562210:CDS |
| TGTCCTCTAGAAATTATCCT+TGG | 0.522542 | 4_1:+61841784 | None:intergenic |
| AAAACGAACCAGAGCGATGG+CGG | 0.523251 | 4_1:+61847081 | None:intergenic |
| TTGAATTGCTGAACATGAAA+AGG | 0.528230 | 4_1:+61841560 | None:intergenic |
| ACATCAACAACTCTCCTCTC+TGG | 0.529738 | 4_1:-61847150 | Msa0562210:CDS |
| CTTGGCTTTCTACTCTATGG+TGG | 0.530341 | 4_1:-61843313 | Msa0562210:CDS |
| GAGCACCAAAAGTGCATATG+TGG | 0.531397 | 4_1:+61846577 | None:intergenic |
| TAGCGAGGAGGTGGAAGATA+CGG | 0.535206 | 4_1:+61847122 | None:intergenic |
| GAGTGAGAGAGCTAATATCT+TGG | 0.539560 | 4_1:-61841738 | Msa0562210:three_prime_UTR |
| ACGGCCATCACCGCCTCCGC+CGG | 0.540048 | 4_1:+61847217 | None:intergenic |
| TGGATGTTTCCGTGAAGTCA+AGG | 0.541628 | 4_1:+61847185 | None:intergenic |
| ATAATAATTGAGCGATTCGA+TGG | 0.545126 | 4_1:-61847254 | Msa0562210:exon |
| CTTTGTGGTTGATATTATGG+TGG | 0.550586 | 4_1:-61843509 | Msa0562210:CDS |
| TTGGATGTTTCTGCACTCCA+AGG | 0.550630 | 4_1:-61841801 | Msa0562210:three_prime_UTR |
| AAAATCACCAGCATGCGGAC+AGG | 0.552128 | 4_1:+61843483 | None:intergenic |
| TAATATATAAGGTTTAGAAT+GGG | 0.554623 | 4_1:+61842528 | None:intergenic |
| TAAGAGTACCGGAATATGGT+TGG | 0.556003 | 4_1:-61846965 | Msa0562210:CDS |
| GATGGTGACCAGAGGCGTGC+CGG | 0.559261 | 4_1:-61847236 | Msa0562210:CDS |
| GCTTTCTACTCTATGGTGGA+AGG | 0.561467 | 4_1:-61843309 | Msa0562210:intron |
| TTTCTACACAATTAATGCTG+TGG | 0.561632 | 4_1:-61846382 | Msa0562210:CDS |
| CAAGACTTGGCATGTCAAGT+AGG | 0.569835 | 4_1:+61846609 | None:intergenic |
| CTTTAATGCATTTGATAAAG+CGG | 0.572380 | 4_1:-61842574 | Msa0562210:CDS |
| ATTCCTGTAACTGTTACAAG+TGG | 0.575083 | 4_1:-61841467 | Msa0562210:three_prime_UTR |
| GAAGTCAAGGGCGGTGACCA+CGG | 0.575503 | 4_1:+61847198 | None:intergenic |
| GGATGTTTCCGTGAAGTCAA+GGG | 0.578164 | 4_1:+61847186 | None:intergenic |
| CACCATAGAGTAGAAAGCCA+AGG | 0.584379 | 4_1:+61843314 | None:intergenic |
| GTGGTAAAGAAAGCAAGACT+TGG | 0.586699 | 4_1:+61846596 | None:intergenic |
| TACTGTGTGATACCTCGCTT+AGG | 0.586918 | 4_1:+61841893 | None:intergenic |
| TGAATGAAATATTTAGATCG+TGG | 0.590121 | 4_1:+61841420 | None:intergenic |
| TCTAAACCTTATATATTACC+TGG | 0.590927 | 4_1:-61842523 | Msa0562210:intron |
| TGGGATGGTTCAAGACATCA+AGG | 0.591039 | 4_1:+61842547 | None:intergenic |
| GGTGACCAGAGGCGTGCCGG+CGG | 0.593085 | 4_1:-61847233 | Msa0562210:CDS |
| GTTGATGTCTCTCCACCAGT+TGG | 0.593361 | 4_1:+61847165 | None:intergenic |
| GTAACTTCTGGACATCTCGC+CGG | 0.593820 | 4_1:+61846776 | None:intergenic |
| GTGGAAACCTGTCCGCATGC+TGG | 0.596961 | 4_1:-61843490 | Msa0562210:CDS |
| ACAGTGGGTATGGTGATCAA+AGG | 0.602275 | 4_1:+61842932 | None:intergenic |
| ATATGGTTGGACCACGCAGA+AGG | 0.605809 | 4_1:-61846952 | Msa0562210:CDS |
| CTGTAACTGTTACAAGTGGG+TGG | 0.616938 | 4_1:-61841463 | Msa0562210:three_prime_UTR |
| ATATAAGGTTTAGAATGGGA+TGG | 0.619205 | 4_1:+61842532 | None:intergenic |
| GCACGAGCTGTATCTACCGA+TGG | 0.625538 | 4_1:-61846417 | Msa0562210:CDS |
| ACCATAGAGTAGAAAGCCAA+GGG | 0.626533 | 4_1:+61843315 | None:intergenic |
| TTCCTGTAACTGTTACAAGT+GGG | 0.627003 | 4_1:-61841466 | Msa0562210:three_prime_UTR |
| TCACGGAAACATCCAACTGG+TGG | 0.629262 | 4_1:-61847177 | Msa0562210:CDS |
| GAAACTTGGTCTCAGACCAT+CGG | 0.635057 | 4_1:+61846401 | None:intergenic |
| ACGCACAGAAAAGGTACAGT+GGG | 0.636239 | 4_1:+61842917 | None:intergenic |
| TGTCCAGAAGTTACAGCCAG+AGG | 0.640455 | 4_1:-61846767 | Msa0562210:intron |
| TGGCGGCGACGATTCCATAG+AGG | 0.642898 | 4_1:+61847098 | None:intergenic |
| ATGGCGAAAACTTAGTCATG+AGG | 0.644807 | 4_1:-61841847 | Msa0562210:three_prime_UTR |
| CGATTCCATAGAGGATAGCG+AGG | 0.651312 | 4_1:+61847107 | None:intergenic |
| GAGAAAACGAACCAGAGCGA+TGG | 0.659605 | 4_1:+61847078 | None:intergenic |
| CATTGTCTATGGGAAAATGT+CGG | 0.669753 | 4_1:-61841585 | Msa0562210:three_prime_UTR |
| AAGATACGGTCCTGCCAGAG+AGG | 0.674122 | 4_1:+61847136 | None:intergenic |
| ACTCCAAGGATAATTTCTAG+AGG | 0.681653 | 4_1:-61841787 | Msa0562210:three_prime_UTR |
| TCGATAAAATCACCAGCATG+CGG | 0.684673 | 4_1:+61843478 | None:intergenic |
| TGTGTGATACCTCGCTTAGG+CGG | 0.685930 | 4_1:+61841896 | None:intergenic |
| AGGAAGCTACCGCCTAAGCG+AGG | 0.687791 | 4_1:-61841905 | Msa0562210:CDS |
| TCGTCGCAAGAAGCTACAAG+AGG | 0.688794 | 4_1:-61842840 | Msa0562210:intron |
| CACGCACAGAAAAGGTACAG+TGG | 0.691363 | 4_1:+61842916 | None:intergenic |
| AGCGATTCGATGGTGACCAG+AGG | 0.694087 | 4_1:-61847244 | Msa0562210:exon |
| TTCCATAGAGGATAGCGAGG+AGG | 0.704072 | 4_1:+61847110 | None:intergenic |
| TGTTTCCGTGAAGTCAAGGG+CGG | 0.720130 | 4_1:+61847189 | None:intergenic |
| AGATTAGCGAGAGATAACGG+AGG | 0.753796 | 4_1:+61847494 | None:intergenic |
| AAAGTGAAAGACCTTCTGCG+TGG | 0.764322 | 4_1:+61846941 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATCAATCAATAAAAT+TGG | + | chr4_1:61841835-61841854 | None:intergenic | 10.0% |
| !!! | TTGTTTTTTTTTTTTTTTTG+TGG | - | chr4_1:61842552-61842571 | Msa0562210:CDS | 10.0% |
| !! | CATATTTAATACTAATAATT+TGG | - | chr4_1:61844771-61844790 | Msa0562210:intron | 10.0% |
| !!! | ATAATTTTTAATAAATTCTG+TGG | + | chr4_1:61844899-61844918 | None:intergenic | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | + | chr4_1:61845152-61845171 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | + | chr4_1:61845153-61845172 | None:intergenic | 10.0% |
| !! | TTTAAATAGCAACTTTATAT+TGG | - | chr4_1:61842368-61842387 | Msa0562210:intron | 15.0% |
| !! | AAAAGTAACAGTATAATATA+AGG | + | chr4_1:61843524-61843543 | None:intergenic | 15.0% |
| !! | TGAAAAATATCATATTTGAA+GGG | + | chr4_1:61844460-61844479 | None:intergenic | 15.0% |
| !! | ATGAAAAATATCATATTTGA+AGG | + | chr4_1:61844461-61844480 | None:intergenic | 15.0% |
| !! | ATTAAATATGAATGAGTATT+AGG | + | chr4_1:61844761-61844780 | None:intergenic | 15.0% |
| !! | TATTAATTAGAGTTATAAAG+GGG | + | chr4_1:61845091-61845110 | None:intergenic | 15.0% |
| !! | GTATTAATTAGAGTTATAAA+GGG | + | chr4_1:61845092-61845111 | None:intergenic | 15.0% |
| !! | AGTATTAATTAGAGTTATAA+AGG | + | chr4_1:61845093-61845112 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | + | chr4_1:61845151-61845170 | None:intergenic | 15.0% |
| !!! | ATGTATAAATATTTTGTCTA+TGG | - | chr4_1:61845810-61845829 | Msa0562210:intron | 15.0% |
| !!! | TAATATATAAGGTTTAGAAT+GGG | + | chr4_1:61846331-61846350 | None:intergenic | 15.0% |
| !!! | TATTATCGTTTTGTTTTGTT+TGG | + | chr4_1:61841468-61841487 | None:intergenic | 20.0% |
| !!! | GATTTTTTGTTGTCAATTTT+AGG | - | chr4_1:61841847-61841866 | Msa0562210:three_prime_UTR | 20.0% |
| !! | ATAGTTGCATTTAATTCTAA+AGG | - | chr4_1:61842189-61842208 | Msa0562210:intron | 20.0% |
| !!! | TTTTTTTTTTTTTGTGGCAA+TGG | - | chr4_1:61842558-61842577 | Msa0562210:CDS | 20.0% |
| !! | ACTAGAAAATTTGAAAAAAC+CGG | - | chr4_1:61843141-61843160 | Msa0562210:intron | 20.0% |
| !! | ACTAAAAAACTAACAATGTT+TGG | + | chr4_1:61843348-61843367 | None:intergenic | 20.0% |
| !!! | TACTTAAAAATTGACTTCTT+GGG | + | chr4_1:61843979-61843998 | None:intergenic | 20.0% |
| !! | ATAGAAAAATGTAAATGGTT+GGG | + | chr4_1:61844275-61844294 | None:intergenic | 20.0% |
| !! | AACACATAGAAAAATGTAAA+TGG | + | chr4_1:61844280-61844299 | None:intergenic | 20.0% |
| !!! | ATTTACATTTTTCTATGTGT+TGG | - | chr4_1:61844279-61844298 | Msa0562210:intron | 20.0% |
| !! | ATTACAAGTAAACGAATAAT+TGG | - | chr4_1:61844538-61844557 | Msa0562210:intron | 20.0% |
| !! | ATTGCTGAAAAAAAGTTATA+TGG | - | chr4_1:61844585-61844604 | Msa0562210:intron | 20.0% |
| !! | AAAGTGGAATATATTGAATT+GGG | + | chr4_1:61845066-61845085 | None:intergenic | 20.0% |
| !! | AAAAGTGGAATATATTGAAT+TGG | + | chr4_1:61845067-61845086 | None:intergenic | 20.0% |
| !! | AAAGTGGAATATATTGAATT+GGG | + | chr4_1:61845066-61845085 | None:intergenic | 20.0% |
| !! | GTAATATATAAGGTTTAGAA+TGG | + | chr4_1:61846332-61846351 | None:intergenic | 20.0% |
| !!! | CAAATAATTTCCTTTTTACA+TGG | + | chr4_1:61846722-61846741 | None:intergenic | 20.0% |
| !! | TAAAATAATTCTGTAACCAT+CGG | + | chr4_1:61846776-61846795 | None:intergenic | 20.0% |
| !! | AATTTAAGCTTCACAAAAAA+AGG | + | chr4_1:61847483-61847502 | None:intergenic | 20.0% |
| !!! | TAGTGTTGTTGTTTTTTGTT+GGG | + | chr4_1:61841429-61841448 | None:intergenic | 25.0% |
| !!! | ATAGTGTTGTTGTTTTTTGT+TGG | + | chr4_1:61841430-61841449 | None:intergenic | 25.0% |
| !! | TAGAATACAATTAAGAGTAC+CGG | - | chr4_1:61841880-61841899 | Msa0562210:CDS | 25.0% |
| !!! | TTTCTCAATTTTTTCGTCAA+TGG | - | chr4_1:61841935-61841954 | Msa0562210:CDS | 25.0% |
| !!! | TTCTCAATTTTTTCGTCAAT+GGG | - | chr4_1:61841936-61841955 | Msa0562210:CDS | 25.0% |
| !!! | TTGAACAACAAAAGTTGATA+AGG | + | chr4_1:61842020-61842039 | None:intergenic | 25.0% |
| ! | ATTTATTCTCATACTCACTT+AGG | - | chr4_1:61842133-61842152 | Msa0562210:intron | 25.0% |
| ! | ACATGATCAAATATGAAATC+AGG | + | chr4_1:61842412-61842431 | None:intergenic | 25.0% |
| !! | AATAGAGATGAAGAATTTTC+TGG | - | chr4_1:61842837-61842856 | Msa0562210:intron | 25.0% |
| !!! | TTGTTAGTTTTTTAGTTGTC+TGG | - | chr4_1:61843352-61843371 | Msa0562210:intron | 25.0% |
| ! | ATTCAATAGAGAAATTCGTT+AGG | + | chr4_1:61843432-61843451 | None:intergenic | 25.0% |
| !! | ATACAATGATAGTGAACAAT+TGG | + | chr4_1:61843484-61843503 | None:intergenic | 25.0% |
| ! | CTAATACTAAAATTGAGTCA+TGG | + | chr4_1:61843587-61843606 | None:intergenic | 25.0% |
| !! | ACTTAAAAATTGACTTCTTG+GGG | + | chr4_1:61843978-61843997 | None:intergenic | 25.0% |
| !! | GTACTTAAAAATTGACTTCT+TGG | + | chr4_1:61843980-61843999 | None:intergenic | 25.0% |
| ! | CATAGAAAAATGTAAATGGT+TGG | + | chr4_1:61844276-61844295 | None:intergenic | 25.0% |
| ! | ATACCACTCTAATAAGAATA+AGG | - | chr4_1:61844648-61844667 | Msa0562210:intron | 25.0% |
| ! | TACCACTCTAATAAGAATAA+GGG | - | chr4_1:61844649-61844668 | Msa0562210:intron | 25.0% |
| ! | AATAACAGAACTGATAACAA+AGG | + | chr4_1:61844945-61844964 | None:intergenic | 25.0% |
| !!! | GGACACTTTTTTTTAGTAAA+TGG | + | chr4_1:61844998-61845017 | None:intergenic | 25.0% |
| !!! | TGAAATGACTCAGTTATTTT+GGG | + | chr4_1:61845019-61845038 | None:intergenic | 25.0% |
| !! | TTGAAATGACTCAGTTATTT+TGG | + | chr4_1:61845020-61845039 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGAAT+TGG | + | chr4_1:61845129-61845148 | None:intergenic | 25.0% |
| !! | TTTGTTTCATTTTGTGTGTT+TGG | - | chr4_1:61845433-61845452 | Msa0562210:intron | 25.0% |
| ! | GAATGATCATAACATTAATC+AGG | - | chr4_1:61845479-61845498 | Msa0562210:intron | 25.0% |
| !! | TTTTCCTATACATGTATGTA+GGG | - | chr4_1:61845502-61845521 | Msa0562210:intron | 25.0% |
| !!! | TTGGACTTTGGAATATTTAA+TGG | - | chr4_1:61845608-61845627 | Msa0562210:intron | 25.0% |
| !!! | TCATTTTTTCAATTCAGACA+AGG | + | chr4_1:61845679-61845698 | None:intergenic | 25.0% |
| ! | ATTCCATTATTGCAAAAACA+TGG | - | chr4_1:61845782-61845801 | Msa0562210:intron | 25.0% |
| ! | CTTTAATGCATTTGATAAAG+CGG | - | chr4_1:61846282-61846301 | Msa0562210:intron | 25.0% |
| ! | TCTAAACCTTATATATTACC+TGG | - | chr4_1:61846333-61846352 | Msa0562210:intron | 25.0% |
| ! | AAAACTAACACATAATTCAG+TGG | + | chr4_1:61846470-61846489 | None:intergenic | 25.0% |
| ! | CAGAAAAAATTAATTTAGGC+AGG | + | chr4_1:61846498-61846517 | None:intergenic | 25.0% |
| !!! | CTGCCTAAATTAATTTTTTC+TGG | - | chr4_1:61846496-61846515 | Msa0562210:intron | 25.0% |
| ! | ACGCCAGAAAAAATTAATTT+AGG | + | chr4_1:61846502-61846521 | None:intergenic | 25.0% |
| !!! | GTTTTAATGTCCATGTAAAA+AGG | - | chr4_1:61846709-61846728 | Msa0562210:intron | 25.0% |
| ! | AATAATTGTAATTTCTCCGA+TGG | - | chr4_1:61846757-61846776 | Msa0562210:intron | 25.0% |
| !!! | GGTTACAGAATTATTTTACT+CGG | - | chr4_1:61846778-61846797 | Msa0562210:CDS | 25.0% |
| ! | TTTACTCGGTTATTAACATT+TGG | - | chr4_1:61846792-61846811 | Msa0562210:CDS | 25.0% |
| ! | TAAAGTGTAAGTCATGAAAA+AGG | - | chr4_1:61846817-61846836 | Msa0562210:intron | 25.0% |
| ! | AAAGTGTAAGTCATGAAAAA+GGG | - | chr4_1:61846818-61846837 | Msa0562210:intron | 25.0% |
| ! | TTCATAATCTACAAACCTTA+AGG | + | chr4_1:61847156-61847175 | None:intergenic | 25.0% |
| ! | TTATGAAACGTGACATTATA+TGG | - | chr4_1:61847169-61847188 | Msa0562210:CDS | 25.0% |
| ! | ATATATACTTGCATTGTCTA+TGG | - | chr4_1:61847260-61847279 | Msa0562210:five_prime_UTR | 25.0% |
| ! | TATATACTTGCATTGTCTAT+GGG | - | chr4_1:61847261-61847280 | Msa0562210:five_prime_UTR | 25.0% |
| ! | TGAATGAAATATTTAGATCG+TGG | + | chr4_1:61847439-61847458 | None:intergenic | 25.0% |
| ! | TTCACAAAAAAAGGAAAGTA+GGG | + | chr4_1:61847474-61847493 | None:intergenic | 25.0% |
| TTTAGATTAGCGAGAGATAA+CGG | + | chr4_1:61841368-61841387 | None:intergenic | 30.0% | |
| !!! | TTTTGTTGGGTTTTGTTTTG+TGG | + | chr4_1:61841416-61841435 | None:intergenic | 30.0% |
| ATAATAATTGAGCGATTCGA+TGG | - | chr4_1:61841602-61841621 | Msa0562210:three_prime_UTR | 30.0% | |
| AAACCCTAAGAAACGAAAAT+GGG | + | chr4_1:61841803-61841822 | None:intergenic | 30.0% | |
| AAAACCCTAAGAAACGAAAA+TGG | + | chr4_1:61841804-61841823 | None:intergenic | 30.0% | |
| !!! | TCTCAATTTTTTCGTCAATG+GGG | - | chr4_1:61841937-61841956 | Msa0562210:CDS | 30.0% |
| !!! | GATGTTTTGTTTTCGTTTTC+CGG | - | chr4_1:61842061-61842080 | Msa0562210:intron | 30.0% |
| CATATTTGATCATGTTATGC+AGG | - | chr4_1:61842417-61842436 | Msa0562210:intron | 30.0% | |
| GCATTAATTGTGTAGAAACT+TGG | + | chr4_1:61842472-61842491 | None:intergenic | 30.0% | |
| TTTCTACACAATTAATGCTG+TGG | - | chr4_1:61842474-61842493 | Msa0562210:intron | 30.0% | |
| CACAAGATGAAAATGTAAAC+AGG | + | chr4_1:61842597-61842616 | None:intergenic | 30.0% | |
| TCTGCATTATTTGATTCCAA+AGG | - | chr4_1:61842875-61842894 | Msa0562210:CDS | 30.0% | |
| TTTGATTCCAAAGGATAAAG+AGG | - | chr4_1:61842884-61842903 | Msa0562210:CDS | 30.0% | |
| ATATTCATTCACAGTACTGT+TGG | - | chr4_1:61842962-61842981 | Msa0562210:intron | 30.0% | |
| TATTCATTCACAGTACTGTT+GGG | - | chr4_1:61842963-61842982 | Msa0562210:intron | 30.0% | |
| TGTTGATCTCACATTATAAC+TGG | - | chr4_1:61843185-61843204 | Msa0562210:intron | 30.0% | |
| GTTGATCTCACATTATAACT+GGG | - | chr4_1:61843186-61843205 | Msa0562210:intron | 30.0% | |
| AACAATGTTTGGCAAATGTT+TGG | + | chr4_1:61843337-61843356 | None:intergenic | 30.0% | |
| AATTCGTTAGGCATTATATG+TGG | + | chr4_1:61843420-61843439 | None:intergenic | 30.0% | |
| TTACCAGAAAATTTCAAGAC+AGG | + | chr4_1:61843458-61843477 | None:intergenic | 30.0% | |
| TTGTTCACTATCATTGTATC+AGG | - | chr4_1:61843485-61843504 | Msa0562210:CDS | 30.0% | |
| TATCATCATCTACCAAAAGT+AGG | - | chr4_1:61843631-61843650 | Msa0562210:intron | 30.0% | |
| GTGATGATTATTCGTATAAC+AGG | + | chr4_1:61843753-61843772 | None:intergenic | 30.0% | |
| ATGATTCTGTACATGTTAAG+TGG | + | chr4_1:61843867-61843886 | None:intergenic | 30.0% | |
| ! | AAAAACTTTGTCACTTACAC+TGG | - | chr4_1:61843894-61843913 | Msa0562210:intron | 30.0% |
| TAAGTACCAAAGAAAATAGC+CGG | - | chr4_1:61843993-61844012 | Msa0562210:intron | 30.0% | |
| GGAACAAAAACACATTAAGT+CGG | - | chr4_1:61844178-61844197 | Msa0562210:intron | 30.0% | |
| GAACAAAAACACATTAAGTC+GGG | - | chr4_1:61844179-61844198 | Msa0562210:intron | 30.0% | |
| TTAAGCCTTTCAGTGTAATT+TGG | + | chr4_1:61844205-61844224 | None:intergenic | 30.0% | |
| AAAAATGTAAATGGTTGGGA+AGG | + | chr4_1:61844271-61844290 | None:intergenic | 30.0% | |
| !!! | TTTGAAGTTTTAAGTCAGCA+AGG | + | chr4_1:61844413-61844432 | None:intergenic | 30.0% |
| ! | ATATCATATTTGAAGGGCAT+GGG | + | chr4_1:61844454-61844473 | None:intergenic | 30.0% |
| AATATCATATTTGAAGGGCA+TGG | + | chr4_1:61844455-61844474 | None:intergenic | 30.0% | |
| TGGAATGTAAAAGAGTTCTA+TGG | - | chr4_1:61844558-61844577 | Msa0562210:intron | 30.0% | |
| GGAATGTAAAAGAGTTCTAT+GGG | - | chr4_1:61844559-61844578 | Msa0562210:intron | 30.0% | |
| TACCCTTATTCTTATTAGAG+TGG | + | chr4_1:61844654-61844673 | None:intergenic | 30.0% | |
| AAGAATAAGGGTAGAGAATA+AGG | - | chr4_1:61844661-61844680 | Msa0562210:intron | 30.0% | |
| AAAAGAGAGAAAACAACTTC+AGG | - | chr4_1:61844686-61844705 | Msa0562210:intron | 30.0% | |
| TGAGTATTAGGCTAAGATAT+TGG | + | chr4_1:61844749-61844768 | None:intergenic | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | + | chr4_1:61845144-61845163 | None:intergenic | 30.0% | |
| AATAAGTGTGAAATGAACCA+AGG | - | chr4_1:61845172-61845191 | Msa0562210:intron | 30.0% | |
| ATAAGTGTGAAATGAACCAA+GGG | - | chr4_1:61845173-61845192 | Msa0562210:intron | 30.0% | |
| AAATGTTTCAGATTGCTTTG+TGG | - | chr4_1:61845332-61845351 | Msa0562210:intron | 30.0% | |
| ! | TTGCTTTGTGGTTGATATTA+TGG | - | chr4_1:61845344-61845363 | Msa0562210:intron | 30.0% |
| ! | GTTTTCCTATACATGTATGT+AGG | - | chr4_1:61845501-61845520 | Msa0562210:intron | 30.0% |
| TTTCCTATACATGTATGTAG+GGG | - | chr4_1:61845503-61845522 | Msa0562210:intron | 30.0% | |
| TTTAATGGAATTAATGCACC+TGG | - | chr4_1:61845623-61845642 | Msa0562210:intron | 30.0% | |
| TTAATGGAATTAATGCACCT+GGG | - | chr4_1:61845624-61845643 | Msa0562210:intron | 30.0% | |
| !! | TGACCATGTTTTTGCAATAA+TGG | + | chr4_1:61845788-61845807 | None:intergenic | 30.0% |
| GTTACAAGTTTACTTGCATT+AGG | - | chr4_1:61845886-61845905 | Msa0562210:intron | 30.0% | |
| !!! | AAGAGGTACTCAATTTTACA+TGG | - | chr4_1:61846033-61846052 | Msa0562210:intron | 30.0% |
| TGTTTGATTGCATACCATAA+AGG | - | chr4_1:61846061-61846080 | Msa0562210:intron | 30.0% | |
| GTTTGATTGCATACCATAAA+GGG | - | chr4_1:61846062-61846081 | Msa0562210:intron | 30.0% | |
| ! | AAGGAAGCATGAAAAACATA+TGG | + | chr4_1:61846164-61846183 | None:intergenic | 30.0% |
| TAACCATAACACATCTGATA+AGG | + | chr4_1:61846183-61846202 | None:intergenic | 30.0% | |
| TAACTCTGATTCTTGTTGAT+TGG | - | chr4_1:61846217-61846236 | Msa0562210:intron | 30.0% | |
| ! | ATATAAGGTTTAGAATGGGA+TGG | + | chr4_1:61846327-61846346 | None:intergenic | 30.0% |
| AACTCACCAGGTAATATATA+AGG | + | chr4_1:61846342-61846361 | None:intergenic | 30.0% | |
| AGCTCAAATTGAATGTTACA+AGG | + | chr4_1:61846378-61846397 | None:intergenic | 30.0% | |
| ACATTCAATTTGAGCTCATA+AGG | - | chr4_1:61846382-61846401 | Msa0562210:CDS | 30.0% | |
| TTGTAGAAAAAATTCAGGCA+GGG | + | chr4_1:61846447-61846466 | None:intergenic | 30.0% | |
| AGTGGTTGTAGAAAAAATTC+AGG | + | chr4_1:61846452-61846471 | None:intergenic | 30.0% | |
| ! | TACAAATTCACTGGCTAATT+AGG | + | chr4_1:61846575-61846594 | None:intergenic | 30.0% |
| TATCTGACTTACAAATTCAC+TGG | + | chr4_1:61846584-61846603 | None:intergenic | 30.0% | |
| TTCCTCCAATTCATATTGTT+AGG | - | chr4_1:61846626-61846645 | Msa0562210:CDS | 30.0% | |
| TCCTCCAATTCATATTGTTA+GGG | - | chr4_1:61846627-61846646 | Msa0562210:intron | 30.0% | |
| AGATCCCTAACAATATGAAT+TGG | + | chr4_1:61846634-61846653 | None:intergenic | 30.0% | |
| ! | AGAAATTTTCTCTTGGGAAA+TGG | - | chr4_1:61846677-61846696 | Msa0562210:intron | 30.0% |
| ! | CATAATCTTTTCAGCGAATT+GGG | + | chr4_1:61846992-61847011 | None:intergenic | 30.0% |
| ATTAGAGGTTACATGTTTCT+TGG | - | chr4_1:61847036-61847055 | Msa0562210:intron | 30.0% | |
| ! | TGGATTTAAAGTTCTCCTTA+AGG | - | chr4_1:61847138-61847157 | Msa0562210:CDS | 30.0% |
| TTGAATTGCTGAACATGAAA+AGG | + | chr4_1:61847299-61847318 | None:intergenic | 30.0% | |
| !!! | ACACATTGAGCAAACTTTTT+TGG | - | chr4_1:61847318-61847337 | Msa0562210:five_prime_UTR | 30.0% |
| !!! | CACATTGAGCAAACTTTTTT+GGG | - | chr4_1:61847319-61847338 | Msa0562210:five_prime_UTR | 30.0% |
| CTTCACAAAAAAAGGAAAGT+AGG | + | chr4_1:61847475-61847494 | None:intergenic | 30.0% | |
| ! | TTCTCCCATTTTCGTTTCTT+AGG | - | chr4_1:61841796-61841815 | Msa0562210:three_prime_UTR | 35.0% |
| ! | TCTCCCATTTTCGTTTCTTA+GGG | - | chr4_1:61841797-61841816 | Msa0562210:three_prime_UTR | 35.0% |
| !! | CAATTAAGAGTACCGGAATA+TGG | - | chr4_1:61841887-61841906 | Msa0562210:CDS | 35.0% |
| !!! | CTCAATTTTTTCGTCAATGG+GGG | - | chr4_1:61841938-61841957 | Msa0562210:CDS | 35.0% |
| !! | TGATTGAATTCTGGTTCTCT+CGG | + | chr4_1:61842168-61842187 | None:intergenic | 35.0% |
| GCAACTATGTGATTGAATTC+TGG | + | chr4_1:61842177-61842196 | None:intergenic | 35.0% | |
| ! | CTTTACCACATATGCACTTT+TGG | - | chr4_1:61842274-61842293 | Msa0562210:intron | 35.0% |
| CAAAAGAAGTAAAACTTGCC+TGG | + | chr4_1:61842325-61842344 | None:intergenic | 35.0% | |
| TGCTGTGGTTTATGTTATTC+AGG | - | chr4_1:61842489-61842508 | Msa0562210:intron | 35.0% | |
| !!! | TCGTGTGTAACCTTTTTCAA+CGG | - | chr4_1:61842687-61842706 | Msa0562210:CDS | 35.0% |
| !!! | AGTAACAGTTTTCTGGGATT+GGG | + | chr4_1:61842787-61842806 | None:intergenic | 35.0% |
| CACAACAGCAATTTCTAAGT+TGG | + | chr4_1:61842924-61842943 | None:intergenic | 35.0% | |
| ! | CTTAGAAATTGCTGTTGTGA+AGG | - | chr4_1:61842925-61842944 | Msa0562210:CDS | 35.0% |
| CTGTGTGTATAGGATATATC+AGG | - | chr4_1:61843094-61843113 | Msa0562210:intron | 35.0% | |
| AAGAAGTCTACGATTCTACA+TGG | + | chr4_1:61843254-61843273 | None:intergenic | 35.0% | |
| GAGTCACAAGCAAATTCAAT+GGG | + | chr4_1:61843384-61843403 | None:intergenic | 35.0% | |
| AGAGTCACAAGCAAATTCAA+TGG | + | chr4_1:61843385-61843404 | None:intergenic | 35.0% | |
| TAAAATTGAGTCATGGAGAC+TGG | + | chr4_1:61843580-61843599 | None:intergenic | 35.0% | |
| TGTACGTTGTACAATACAGA+CGG | - | chr4_1:61843691-61843710 | Msa0562210:intron | 35.0% | |
| ! | TGGATATTGTCTTTGCTGTA+AGG | + | chr4_1:61843826-61843845 | None:intergenic | 35.0% |
| CACTGTTTAGATAGCAGATT+AGG | + | chr4_1:61843921-61843940 | None:intergenic | 35.0% | |
| !! | TTTTCTCCGGCTATTTTCTT+TGG | + | chr4_1:61844002-61844021 | None:intergenic | 35.0% |
| AAAGAAAATAGCCGGAGAAA+AGG | - | chr4_1:61844001-61844020 | Msa0562210:intron | 35.0% | |
| !!! | ATTTCTAGTGACCTTTTCTC+CGG | + | chr4_1:61844015-61844034 | None:intergenic | 35.0% |
| !! | AGGAATTTTTGGATCTGCTA+GGG | + | chr4_1:61844038-61844057 | None:intergenic | 35.0% |
| !! | AAGGAATTTTTGGATCTGCT+AGG | + | chr4_1:61844039-61844058 | None:intergenic | 35.0% |
| AAAAATTCCTTGAAAGTCGC+CGG | - | chr4_1:61844048-61844067 | Msa0562210:intron | 35.0% | |
| CAGAAGTGAAAAATGGCAAA+AGG | - | chr4_1:61844157-61844176 | Msa0562210:intron | 35.0% | |
| AAAGGCTTAAATCATAGTGC+TGG | - | chr4_1:61844215-61844234 | Msa0562210:intron | 35.0% | |
| AGGCTAAGCAATGCATTATT+GGG | + | chr4_1:61844322-61844341 | None:intergenic | 35.0% | |
| AATAGCATCAGTTAGAAGAC+TGG | + | chr4_1:61844359-61844378 | None:intergenic | 35.0% | |
| ACTATGAACAGTTGATCACT+TGG | - | chr4_1:61844381-61844400 | Msa0562210:intron | 35.0% | |
| !!! | TAGTTAGGCTGTTGGTTTTA+TGG | + | chr4_1:61844820-61844839 | None:intergenic | 35.0% |
| TAAAACCAACAGCCTAACTA+CGG | - | chr4_1:61844820-61844839 | Msa0562210:intron | 35.0% | |
| ATAACAAAGGTCAAAGACAG+AGG | + | chr4_1:61844932-61844951 | None:intergenic | 35.0% | |
| AGTAAATGGCTCAGTTAATC+CGG | + | chr4_1:61844984-61845003 | None:intergenic | 35.0% | |
| GAGTTATAAAGGGGAAAAAG+TGG | + | chr4_1:61845082-61845101 | None:intergenic | 35.0% | |
| ! | CTTTGTGGTTGATATTATGG+TGG | - | chr4_1:61845347-61845366 | Msa0562210:intron | 35.0% |
| TTATCGAAGATGTTCTTTGC+AGG | - | chr4_1:61845394-61845413 | Msa0562210:intron | 35.0% | |
| TCAACTGCATTTGATGTGTT+TGG | - | chr4_1:61845589-61845608 | Msa0562210:intron | 35.0% | |
| CATTTGATGTGTTTGGACTT+TGG | - | chr4_1:61845596-61845615 | Msa0562210:intron | 35.0% | |
| !!! | TGACTGTTATTTTGTAACCC+AGG | + | chr4_1:61845644-61845663 | None:intergenic | 35.0% |
| TAAGTTCTTGAAACCTATGC+TGG | - | chr4_1:61845742-61845761 | Msa0562210:intron | 35.0% | |
| CAATTTCAGAAAACCAGCAT+AGG | + | chr4_1:61845758-61845777 | None:intergenic | 35.0% | |
| TATTCTGTACAGAGCCTAAA+TGG | + | chr4_1:61845844-61845863 | None:intergenic | 35.0% | |
| AAAGAGCAGGTAAATACTCA+GGG | + | chr4_1:61846116-61846135 | None:intergenic | 35.0% | |
| CTTCCTTATCAGATGTGTTA+TGG | - | chr4_1:61846177-61846196 | Msa0562210:intron | 35.0% | |
| ATCAGATGTGTTATGGTTAG+TGG | - | chr4_1:61846184-61846203 | Msa0562210:intron | 35.0% | |
| TGTAGAAAAAATTCAGGCAG+GGG | + | chr4_1:61846446-61846465 | None:intergenic | 35.0% | |
| GTTGTAGAAAAAATTCAGGC+AGG | + | chr4_1:61846448-61846467 | None:intergenic | 35.0% | |
| TCCCTAACAATATGAATTGG+AGG | + | chr4_1:61846631-61846650 | None:intergenic | 35.0% | |
| CAAGAGAAAATTTCTCAGGT+CGG | + | chr4_1:61846672-61846691 | None:intergenic | 35.0% | |
| ! | GACCTGAGAAATTTTCTCTT+GGG | - | chr4_1:61846671-61846690 | Msa0562210:intron | 35.0% |
| TTCCCAAGAGAAAATTTCTC+AGG | + | chr4_1:61846676-61846695 | None:intergenic | 35.0% | |
| TCTCTTGGGAAATGGTTAAT+TGG | - | chr4_1:61846685-61846704 | Msa0562210:intron | 35.0% | |
| ! | GGAAATTATTTGCTGCTATG+AGG | - | chr4_1:61846730-61846749 | Msa0562210:intron | 35.0% |
| ! | TCTTACATTTTTGCTGCAGT+TGG | - | chr4_1:61846890-61846909 | Msa0562210:intron | 35.0% |
| GGAAATATTGCCTTCTTCTT+TGG | - | chr4_1:61846914-61846933 | Msa0562210:intron | 35.0% | |
| ATGAAAAGGACCAAAGAAGA+AGG | + | chr4_1:61846927-61846946 | None:intergenic | 35.0% | |
| ! | CTTTGGTCCTTTTCATTTTG+AGG | - | chr4_1:61846931-61846950 | Msa0562210:CDS | 35.0% |
| GTAGCTTCCTCAAAATGAAA+AGG | + | chr4_1:61846941-61846960 | None:intergenic | 35.0% | |
| ! | CCATAATCTTTTCAGCGAAT+TGG | + | chr4_1:61846993-61847012 | None:intergenic | 35.0% |
| CCAATTCGCTGAAAAGATTA+TGG | - | chr4_1:61846990-61847009 | Msa0562210:CDS | 35.0% | |
| ! | ACTCCAAGGATAATTTCTAG+AGG | - | chr4_1:61847069-61847088 | Msa0562210:intron | 35.0% |
| ! | TGTCCTCTAGAAATTATCCT+TGG | + | chr4_1:61847075-61847094 | None:intergenic | 35.0% |
| CTCACTCGACATACAAAATA+CGG | + | chr4_1:61847105-61847124 | None:intergenic | 35.0% | |
| ! | ATATGGATTGTCAAACGTGT+TGG | - | chr4_1:61847186-61847205 | Msa0562210:CDS | 35.0% |
| ! | TATGGATTGTCAAACGTGTT+GGG | - | chr4_1:61847187-61847206 | Msa0562210:CDS | 35.0% |
| CATTGTCTATGGGAAAATGT+CGG | - | chr4_1:61847271-61847290 | Msa0562210:five_prime_UTR | 35.0% | |
| ATTCCTGTAACTGTTACAAG+TGG | - | chr4_1:61847389-61847408 | Msa0562210:five_prime_UTR | 35.0% | |
| TTCCTGTAACTGTTACAAGT+GGG | - | chr4_1:61847390-61847409 | Msa0562210:five_prime_UTR | 35.0% | |
| CGGCGATGGAGAAATAATTT+GGG | + | chr4_1:61841392-61841411 | None:intergenic | 40.0% | |
| ! | CCAAATTATTTCTCCATCGC+CGG | - | chr4_1:61841390-61841409 | Msa0562210:three_prime_UTR | 40.0% |
| !! | TAAGAGTACCGGAATATGGT+TGG | - | chr4_1:61841891-61841910 | Msa0562210:CDS | 40.0% |
| CAATGAGATGTTCATACCTC+TGG | + | chr4_1:61842108-61842127 | None:intergenic | 40.0% | |
| GTGGTAAAGAAAGCAAGACT+TGG | + | chr4_1:61842263-61842282 | None:intergenic | 40.0% | |
| TTGACCACAAGTGCAATCAT+GGG | + | chr4_1:61842527-61842546 | None:intergenic | 40.0% | |
| TTTGACCACAAGTGCAATCA+TGG | + | chr4_1:61842528-61842547 | None:intergenic | 40.0% | |
| !!! | CGTGTGTAACCTTTTTCAAC+GGG | - | chr4_1:61842688-61842707 | Msa0562210:CDS | 40.0% |
| ATCTGACAAAGGAACCTACT+GGG | + | chr4_1:61842725-61842744 | None:intergenic | 40.0% | |
| CAACTTGTCAGATCTGACAA+AGG | + | chr4_1:61842736-61842755 | None:intergenic | 40.0% | |
| !!! | GTAACAGTTTTCTGGGATTG+GGG | + | chr4_1:61842786-61842805 | None:intergenic | 40.0% |
| !!! | CAGTAACAGTTTTCTGGGAT+TGG | + | chr4_1:61842788-61842807 | None:intergenic | 40.0% |
| ! | CTGAGCAGTAACAGTTTTCT+GGG | + | chr4_1:61842793-61842812 | None:intergenic | 40.0% |
| GCAACAACCTCTTTATCCTT+TGG | + | chr4_1:61842894-61842913 | None:intergenic | 40.0% | |
| GTTGTGAAGGAGTTTCTCTT+AGG | - | chr4_1:61842938-61842957 | Msa0562210:CDS | 40.0% | |
| !! | TACTGTTGGGTTTGATGATG+AGG | - | chr4_1:61842976-61842995 | Msa0562210:intron | 40.0% |
| !! | TACTCTTTGAGTTCTGGCTT+AGG | - | chr4_1:61843007-61843026 | Msa0562210:intron | 40.0% |
| !! | TTCTGGCTTAGGATTGACTT+TGG | - | chr4_1:61843018-61843037 | Msa0562210:intron | 40.0% |
| GAACTAGAAGCTTTCATTGC+TGG | + | chr4_1:61843057-61843076 | None:intergenic | 40.0% | |
| TATACACACAGAGATCAGAG+GGG | + | chr4_1:61843085-61843104 | None:intergenic | 40.0% | |
| CTATACACACAGAGATCAGA+GGG | + | chr4_1:61843086-61843105 | None:intergenic | 40.0% | |
| TCAATTCAGGATTGTCTGAC+CGG | + | chr4_1:61843163-61843182 | None:intergenic | 40.0% | |
| TGAGATCAACAGCTCAATTC+AGG | + | chr4_1:61843176-61843195 | None:intergenic | 40.0% | |
| TAACCAACTCCACCTTAAAC+AGG | - | chr4_1:61843223-61843242 | Msa0562210:intron | 40.0% | |
| ! | TACATGGTTTGGCCTGTTTA+AGG | + | chr4_1:61843238-61843257 | None:intergenic | 40.0% |
| GTCTACGATTCTACATGGTT+TGG | + | chr4_1:61843249-61843268 | None:intergenic | 40.0% | |
| CCAGAAAATTTCAAGACAGG+TGG | + | chr4_1:61843455-61843474 | None:intergenic | 40.0% | |
| ! | CCACCTGTCTTGAAATTTTC+TGG | - | chr4_1:61843452-61843471 | Msa0562210:intron | 40.0% |
| CTACCAAAAGTAGGTGTTTG+AGG | - | chr4_1:61843640-61843659 | Msa0562210:intron | 40.0% | |
| ! | GCACTTGTTCTGAATATGTG+CGG | - | chr4_1:61843662-61843681 | Msa0562210:intron | 40.0% |
| GTACGTTGTACAATACAGAC+GGG | - | chr4_1:61843692-61843711 | Msa0562210:intron | 40.0% | |
| CAATACAGACGGGAAAAAGA+TGG | - | chr4_1:61843702-61843721 | Msa0562210:intron | 40.0% | |
| TATGTAGCAGTGTTGTCTAG+TGG | + | chr4_1:61843778-61843797 | None:intergenic | 40.0% | |
| GCATGAATATGTGTGGCAAT+AGG | + | chr4_1:61843804-61843823 | None:intergenic | 40.0% | |
| CTGTAAGGCATGAATATGTG+TGG | + | chr4_1:61843811-61843830 | None:intergenic | 40.0% | |
| ! | GGCGACTTTCAAGGAATTTT+TGG | + | chr4_1:61844049-61844068 | None:intergenic | 40.0% |
| AAAATTCCTTGAAAGTCGCC+GGG | - | chr4_1:61844049-61844068 | Msa0562210:intron | 40.0% | |
| CTGTTGAATAAAACAGTGCC+CGG | + | chr4_1:61844070-61844089 | None:intergenic | 40.0% | |
| ! | AGCTGCTAGACAACTTTTCT+TGG | - | chr4_1:61844097-61844116 | Msa0562210:intron | 40.0% |
| ! | TGCGCATGAGTTTTCTATCT+GGG | + | chr4_1:61844139-61844158 | None:intergenic | 40.0% |
| TCATGCGCAGAAGTGAAAAA+TGG | - | chr4_1:61844150-61844169 | Msa0562210:intron | 40.0% | |
| AATGCATTATTGGGTGACTG+GGG | + | chr4_1:61844313-61844332 | None:intergenic | 40.0% | |
| CAATGCATTATTGGGTGACT+GGG | + | chr4_1:61844314-61844333 | None:intergenic | 40.0% | |
| GAGGCTAAGCAATGCATTAT+TGG | + | chr4_1:61844323-61844342 | None:intergenic | 40.0% | |
| CTATCTGTTCTGCAGTGTTA+AGG | + | chr4_1:61844612-61844631 | None:intergenic | 40.0% | |
| GCAGAACAGATAGACATTGA+AGG | - | chr4_1:61844619-61844638 | Msa0562210:intron | 40.0% | |
| GAACAGATAGACATTGAAGG+TGG | - | chr4_1:61844622-61844641 | Msa0562210:intron | 40.0% | |
| !!! | GCTGTTGGTTTTATGGTTAG+TGG | + | chr4_1:61844813-61844832 | None:intergenic | 40.0% |
| ! | CATCGATTGTTTCCGTAGTT+AGG | + | chr4_1:61844835-61844854 | None:intergenic | 40.0% |
| GTAAATGGCTCAGTTAATCC+GGG | + | chr4_1:61844983-61845002 | None:intergenic | 40.0% | |
| ACCAAGGGCTCAATTAATTC+AGG | - | chr4_1:61845188-61845207 | Msa0562210:intron | 40.0% | |
| TCCTGAATTAATTGAGCCCT+TGG | + | chr4_1:61845192-61845211 | None:intergenic | 40.0% | |
| AGGGCTCAATTAATTCAGGA+CGG | - | chr4_1:61845192-61845211 | Msa0562210:intron | 40.0% | |
| CTCAATTAATTCAGGACGGA+GGG | - | chr4_1:61845196-61845215 | Msa0562210:intron | 40.0% | |
| GGAGGGAGTAATATCTATTC+AGG | - | chr4_1:61845213-61845232 | Msa0562210:intron | 40.0% | |
| TCGATAAAATCACCAGCATG+CGG | + | chr4_1:61845381-61845400 | None:intergenic | 40.0% | |
| ! | TCATTTTGTGTGTTTGGACC+AGG | - | chr4_1:61845439-61845458 | Msa0562210:intron | 40.0% |
| ! | CATTTTGTGTGTTTGGACCA+GGG | - | chr4_1:61845440-61845459 | Msa0562210:intron | 40.0% |
| ! | ATTTTGTGTGTTTGGACCAG+GGG | - | chr4_1:61845441-61845460 | Msa0562210:intron | 40.0% |
| AGACCCCTACATACATGTAT+AGG | + | chr4_1:61845509-61845528 | None:intergenic | 40.0% | |
| ACCATAGAGTAGAAAGCCAA+GGG | + | chr4_1:61845544-61845563 | None:intergenic | 40.0% | |
| CTATGGTCAGTGTTCCATTT+AGG | - | chr4_1:61845827-61845846 | Msa0562210:intron | 40.0% | |
| TCATAGATCACGCACAGAAA+AGG | + | chr4_1:61845951-61845970 | None:intergenic | 40.0% | |
| CGCTTTCCTGTTGAATCTAA+AGG | - | chr4_1:61845993-61846012 | Msa0562210:intron | 40.0% | |
| AGGGAAAAGGAAAGAAGAGA+GGG | + | chr4_1:61846097-61846116 | None:intergenic | 40.0% | |
| CAGGTAAATACTCAGGGAAA+AGG | + | chr4_1:61846110-61846129 | None:intergenic | 40.0% | |
| GAAAGAGCAGGTAAATACTC+AGG | + | chr4_1:61846117-61846136 | None:intergenic | 40.0% | |
| TTACCTGCTCTTTCTAATGC+AGG | - | chr4_1:61846123-61846142 | Msa0562210:intron | 40.0% | |
| GAATGTCAGCTTTCAACAGT+GGG | + | chr4_1:61846424-61846443 | None:intergenic | 40.0% | |
| !! | TGAAGCTAGTCTTGGATTCT+TGG | - | chr4_1:61846528-61846547 | Msa0562210:intron | 40.0% |
| !! | CTAGTCTTGGATTCTTGGTA+AGG | - | chr4_1:61846533-61846552 | Msa0562210:intron | 40.0% |
| ! | CGACCTGAGAAATTTTCTCT+TGG | - | chr4_1:61846670-61846689 | Msa0562210:intron | 40.0% |
| GTGTTTGTTCATCGTGCTAT+AGG | - | chr4_1:61846840-61846859 | Msa0562210:intron | 40.0% | |
| ! | TACATTTTTGCTGCAGTTGG+TGG | - | chr4_1:61846893-61846912 | Msa0562210:intron | 40.0% |
| ATGGCGAAAACTTAGTCATG+AGG | - | chr4_1:61847009-61847028 | Msa0562210:intron | 40.0% | |
| ! | TAGTCATGAGGCATCATTAG+AGG | - | chr4_1:61847021-61847040 | Msa0562210:intron | 40.0% |
| GAGTGAGAGAGCTAATATCT+TGG | - | chr4_1:61847118-61847137 | Msa0562210:CDS | 40.0% | |
| !!! | TGAGCAAACTTTTTTGGGAG+AGG | - | chr4_1:61847324-61847343 | Msa0562210:five_prime_UTR | 40.0% |
| CCGGCGATGGAGAAATAATT+TGG | + | chr4_1:61841393-61841412 | None:intergenic | 45.0% | |
| !!! | GTTGGGTTTTGTTTTGTGGC+CGG | + | chr4_1:61841412-61841431 | None:intergenic | 45.0% |
| GGATGTTTCCGTGAAGTCAA+GGG | + | chr4_1:61841673-61841692 | None:intergenic | 45.0% | |
| TGGATGTTTCCGTGAAGTCA+AGG | + | chr4_1:61841674-61841693 | None:intergenic | 45.0% | |
| ACTTCACGGAAACATCCAAC+TGG | - | chr4_1:61841676-61841695 | Msa0562210:three_prime_UTR | 45.0% | |
| ACATCAACAACTCTCCTCTC+TGG | - | chr4_1:61841706-61841725 | Msa0562210:three_prime_UTR | 45.0% | |
| AAAGTGAAAGACCTTCTGCG+TGG | + | chr4_1:61841918-61841937 | None:intergenic | 45.0% | |
| ATACCTCTGGCTGTAACTTC+TGG | + | chr4_1:61842095-61842114 | None:intergenic | 45.0% | |
| CAAGACTTGGCATGTCAAGT+AGG | + | chr4_1:61842250-61842269 | None:intergenic | 45.0% | |
| ! | GAGCACCAAAAGTGCATATG+TGG | + | chr4_1:61842282-61842301 | None:intergenic | 45.0% |
| !!! | ATGCACTTTTGGTGCTCTTC+TGG | - | chr4_1:61842285-61842304 | Msa0562210:intron | 45.0% |
| !!! | TGCACTTTTGGTGCTCTTCT+GGG | - | chr4_1:61842286-61842305 | Msa0562210:intron | 45.0% |
| CTGGGCTGAGATTTATTACC+AGG | - | chr4_1:61842304-61842323 | Msa0562210:intron | 45.0% | |
| GAAACTTGGTCTCAGACCAT+CGG | + | chr4_1:61842458-61842477 | None:intergenic | 45.0% | |
| CTTAGAGCTCCCGTTGAAAA+AGG | + | chr4_1:61842700-61842719 | None:intergenic | 45.0% | |
| GATCTGACAAAGGAACCTAC+TGG | + | chr4_1:61842726-61842745 | None:intergenic | 45.0% | |
| ! | GCTGAGCAGTAACAGTTTTC+TGG | + | chr4_1:61842794-61842813 | None:intergenic | 45.0% |
| !! | GGTTTGATGATGAGGCTGAT+GGG | - | chr4_1:61842984-61843003 | Msa0562210:intron | 45.0% |
| ! | GATGGGTACTCTTTGAGTTC+TGG | - | chr4_1:61843001-61843020 | Msa0562210:intron | 45.0% |
| CCTATACACACAGAGATCAG+AGG | + | chr4_1:61843087-61843106 | None:intergenic | 45.0% | |
| CCTCTGATCTCTGTGTGTAT+AGG | - | chr4_1:61843084-61843103 | Msa0562210:intron | 45.0% | |
| ! | ATGGTTTGGCCTGTTTAAGG+TGG | + | chr4_1:61843235-61843254 | None:intergenic | 45.0% |
| ! | GTGCCTCAAACACCTACTTT+TGG | + | chr4_1:61843646-61843665 | None:intergenic | 45.0% |
| ATGTTAAGTGGTGAGCGTTC+AGG | + | chr4_1:61843855-61843874 | None:intergenic | 45.0% | |
| AAAGTTGTCTAGCAGCTTGC+AGG | + | chr4_1:61844094-61844113 | None:intergenic | 45.0% | |
| ! | CATGAGTTTTCTATCTGGGC+TGG | + | chr4_1:61844135-61844154 | None:intergenic | 45.0% |
| ! | CTGCGCATGAGTTTTCTATC+TGG | + | chr4_1:61844140-61844159 | None:intergenic | 45.0% |
| TCGGGCCAAATTACACTGAA+AGG | - | chr4_1:61844197-61844216 | Msa0562210:intron | 45.0% | |
| ! | TGTGTCGGTGAACAAACACA+TGG | + | chr4_1:61844248-61844267 | None:intergenic | 45.0% |
| ! | AAATGGTTGGGAAGGTGTGT+CGG | + | chr4_1:61844263-61844282 | None:intergenic | 45.0% |
| GCAATGCATTATTGGGTGAC+TGG | + | chr4_1:61844315-61844334 | None:intergenic | 45.0% | |
| AGCATCAGTTAGAAGACTGG+TGG | + | chr4_1:61844356-61844375 | None:intergenic | 45.0% | |
| TGTTTCCGTAGTTAGGCTGT+TGG | + | chr4_1:61844828-61844847 | None:intergenic | 45.0% | |
| GCTCAATTAATTCAGGACGG+AGG | - | chr4_1:61845195-61845214 | Msa0562210:intron | 45.0% | |
| CACCATAGAGTAGAAAGCCA+AGG | + | chr4_1:61845545-61845564 | None:intergenic | 45.0% | |
| ! | CTTGGCTTTCTACTCTATGG+TGG | - | chr4_1:61845543-61845562 | Msa0562210:intron | 45.0% |
| ! | GCTTTCTACTCTATGGTGGA+AGG | - | chr4_1:61845547-61845566 | Msa0562210:intron | 45.0% |
| ACAGTGGGTATGGTGATCAA+AGG | + | chr4_1:61845927-61845946 | None:intergenic | 45.0% | |
| ! | CAGAAAAGGTACAGTGGGTA+TGG | + | chr4_1:61845937-61845956 | None:intergenic | 45.0% |
| ! | ACGCACAGAAAAGGTACAGT+GGG | + | chr4_1:61845942-61845961 | None:intergenic | 45.0% |
| CGACGACCTTTAGATTCAAC+AGG | + | chr4_1:61846002-61846021 | None:intergenic | 45.0% | |
| GGAAAGAAGAGAGGGATGAA+CGG | + | chr4_1:61846089-61846108 | None:intergenic | 45.0% | |
| CAGGGAAAAGGAAAGAAGAG+AGG | + | chr4_1:61846098-61846117 | None:intergenic | 45.0% | |
| CAACCTGCATTAGAAAGAGC+AGG | + | chr4_1:61846129-61846148 | None:intergenic | 45.0% | |
| CTGCTCTTTCTAATGCAGGT+TGG | - | chr4_1:61846127-61846146 | Msa0562210:intron | 45.0% | |
| TGGGATGGTTCAAGACATCA+AGG | + | chr4_1:61846312-61846331 | None:intergenic | 45.0% | |
| GGAATGTCAGCTTTCAACAG+TGG | + | chr4_1:61846425-61846444 | None:intergenic | 45.0% | |
| ! | GTGCGATTTGAAGCTAGTCT+TGG | - | chr4_1:61846520-61846539 | Msa0562210:intron | 45.0% |
| TACTGTGTGATACCTCGCTT+AGG | + | chr4_1:61846966-61846985 | None:intergenic | 45.0% | |
| ! | TTGGATGTTTCTGCACTCCA+AGG | - | chr4_1:61847055-61847074 | Msa0562210:intron | 45.0% |
| CACCCACTTGTAACAGTTAC+AGG | + | chr4_1:61847395-61847414 | None:intergenic | 45.0% | |
| CTGTAACTGTTACAAGTGGG+TGG | - | chr4_1:61847393-61847412 | Msa0562210:five_prime_UTR | 45.0% | |
| !!! | TTTTGTTTTGTGGCCGGCGA+TGG | + | chr4_1:61841406-61841425 | None:intergenic | 50.0% |
| TGTTTCCGTGAAGTCAAGGG+CGG | + | chr4_1:61841670-61841689 | None:intergenic | 50.0% | |
| TCACGGAAACATCCAACTGG+TGG | - | chr4_1:61841679-61841698 | Msa0562210:three_prime_UTR | 50.0% | |
| GTTGATGTCTCTCCACCAGT+TGG | + | chr4_1:61841694-61841713 | None:intergenic | 50.0% | |
| TAGCGAGGAGGTGGAAGATA+CGG | + | chr4_1:61841737-61841756 | None:intergenic | 50.0% | |
| TTCCATAGAGGATAGCGAGG+AGG | + | chr4_1:61841749-61841768 | None:intergenic | 50.0% | |
| CGATTCCATAGAGGATAGCG+AGG | + | chr4_1:61841752-61841771 | None:intergenic | 50.0% | |
| AAAACGAACCAGAGCGATGG+CGG | + | chr4_1:61841778-61841797 | None:intergenic | 50.0% | |
| GAGAAAACGAACCAGAGCGA+TGG | + | chr4_1:61841781-61841800 | None:intergenic | 50.0% | |
| TGCGTGGTCCAACCATATTC+CGG | + | chr4_1:61841902-61841921 | None:intergenic | 50.0% | |
| ATATGGTTGGACCACGCAGA+AGG | - | chr4_1:61841904-61841923 | Msa0562210:CDS | 50.0% | |
| GTAACTTCTGGACATCTCGC+CGG | + | chr4_1:61842083-61842102 | None:intergenic | 50.0% | |
| TGTCCAGAAGTTACAGCCAG+AGG | - | chr4_1:61842089-61842108 | Msa0562210:intron | 50.0% | |
| CTTGCCCATGATTGCACTTG+TGG | - | chr4_1:61842520-61842539 | Msa0562210:intron | 50.0% | |
| AGGACACATGGACAGATGGA+GGG | + | chr4_1:61842762-61842781 | None:intergenic | 50.0% | |
| AAGGACACATGGACAGATGG+AGG | + | chr4_1:61842763-61842782 | None:intergenic | 50.0% | |
| !!! | CAGTTTTCTGGGATTGGGGA+AGG | + | chr4_1:61842782-61842801 | None:intergenic | 50.0% |
| !! | GGGTTTGATGATGAGGCTGA+TGG | - | chr4_1:61842983-61843002 | Msa0562210:intron | 50.0% |
| TCATTGCTGGTCGCACATGT+TGG | + | chr4_1:61843044-61843063 | None:intergenic | 50.0% | |
| ! | TGGCCTGTTTAAGGTGGAGT+TGG | + | chr4_1:61843229-61843248 | None:intergenic | 50.0% |
| CGGGAAAAAGATGGAGTCAG+AGG | - | chr4_1:61843711-61843730 | Msa0562210:intron | 50.0% | |
| !! | CTGGTGGCTTTGGTATGTTC+TGG | + | chr4_1:61843951-61843970 | None:intergenic | 50.0% |
| ! | ATTGACTTCTTGGGGCTGAC+TGG | + | chr4_1:61843970-61843989 | None:intergenic | 50.0% |
| CTTCAAACGCCTGTCACTGT+AGG | - | chr4_1:61844426-61844445 | Msa0562210:intron | 50.0% | |
| ATTCTATACTCCCTCCGTCC+CGG | - | chr4_1:61844962-61844981 | Msa0562210:intron | 50.0% | |
| ATGGCTCAGTTAATCCGGGA+CGG | + | chr4_1:61844979-61844998 | None:intergenic | 50.0% | |
| AAAATCACCAGCATGCGGAC+AGG | + | chr4_1:61845376-61845395 | None:intergenic | 50.0% | |
| CAGATCTGATAGTTGACCCC+TGG | + | chr4_1:61845460-61845479 | None:intergenic | 50.0% | |
| ! | GTCTCTTTGTTTGCAGCCCT+TGG | - | chr4_1:61845525-61845544 | Msa0562210:intron | 50.0% |
| ! | GCCCTTGGCTTTCTACTCTA+TGG | - | chr4_1:61845540-61845559 | Msa0562210:intron | 50.0% |
| ! | CACGCACAGAAAAGGTACAG+TGG | + | chr4_1:61845943-61845962 | None:intergenic | 50.0% |
| TCGTCGCAAGAAGCTACAAG+AGG | - | chr4_1:61846016-61846035 | Msa0562210:intron | 50.0% | |
| AGGGATGAACGGACCCTTTA+TGG | + | chr4_1:61846078-61846097 | None:intergenic | 50.0% | |
| TGTGTGATACCTCGCTTAGG+CGG | + | chr4_1:61846963-61846982 | None:intergenic | 50.0% | |
| AGCGATTCGATGGTGACCAG+AGG | - | chr4_1:61841612-61841631 | Msa0562210:three_prime_UTR | 55.0% | |
| CAACAACTCTCCTCTCTGGC+AGG | - | chr4_1:61841710-61841729 | Msa0562210:three_prime_UTR | 55.0% | |
| AAGATACGGTCCTGCCAGAG+AGG | + | chr4_1:61841723-61841742 | None:intergenic | 55.0% | |
| CATAGAGGATAGCGAGGAGG+TGG | + | chr4_1:61841746-61841765 | None:intergenic | 55.0% | |
| CACCTCCTCGCTATCCTCTA+TGG | - | chr4_1:61841744-61841763 | Msa0562210:three_prime_UTR | 55.0% | |
| GCACGAGCTGTATCTACCGA+TGG | - | chr4_1:61842439-61842458 | Msa0562210:intron | 55.0% | |
| !! | GGGAGCTCTAAGATCCCAGT+AGG | - | chr4_1:61842708-61842727 | Msa0562210:CDS | 55.0% |
| GGACACATGGACAGATGGAG+GGG | + | chr4_1:61842761-61842780 | None:intergenic | 55.0% | |
| GGGAAGGACACATGGACAGA+TGG | + | chr4_1:61842766-61842785 | None:intergenic | 55.0% | |
| TGGGATTGGGGAAGGACACA+TGG | + | chr4_1:61842774-61842793 | None:intergenic | 55.0% | |
| GGTGAGCGTTCAGGTATGTG+TGG | + | chr4_1:61843846-61843865 | None:intergenic | 55.0% | |
| !! | TATCTGGGCTGGTGCGTTTC+TGG | + | chr4_1:61844124-61844143 | None:intergenic | 55.0% |
| CTCAGTTAATCCGGGACGGA+GGG | + | chr4_1:61844975-61844994 | None:intergenic | 55.0% | |
| GAAGTCAAGGGCGGTGACCA+CGG | + | chr4_1:61841661-61841680 | None:intergenic | 60.0% | |
| GGTCACCGCCCTTGACTTCA+CGG | - | chr4_1:61841662-61841681 | Msa0562210:three_prime_UTR | 60.0% | |
| TGGCGGCGACGATTCCATAG+AGG | + | chr4_1:61841761-61841780 | None:intergenic | 60.0% | |
| TTGGGGCTGACTGGTGGCTT+TGG | + | chr4_1:61843961-61843980 | None:intergenic | 60.0% | |
| GACTTCTTGGGGCTGACTGG+TGG | + | chr4_1:61843967-61843986 | None:intergenic | 60.0% | |
| ACAGTGCCCGGCGACTTTCA+AGG | + | chr4_1:61844058-61844077 | None:intergenic | 60.0% | |
| GACTGGTGGCAGCGTACATG+AGG | + | chr4_1:61844342-61844361 | None:intergenic | 60.0% | |
| GCATGGGAGCCTACAGTGAC+AGG | + | chr4_1:61844438-61844457 | None:intergenic | 60.0% | |
| GCTCAGTTAATCCGGGACGG+AGG | + | chr4_1:61844976-61844995 | None:intergenic | 60.0% | |
| GTGGAAACCTGTCCGCATGC+TGG | - | chr4_1:61845366-61845385 | Msa0562210:intron | 60.0% | |
| AGGAAGCTACCGCCTAAGCG+AGG | - | chr4_1:61846951-61846970 | Msa0562210:CDS | 60.0% | |
| ! | GATGGTGACCAGAGGCGTGC+CGG | - | chr4_1:61841620-61841639 | Msa0562210:three_prime_UTR | 65.0% |
| AATCGTCGCCGCCATCGCTC+TGG | - | chr4_1:61841767-61841786 | Msa0562210:three_prime_UTR | 65.0% | |
| ! | GGTGACCAGAGGCGTGCCGG+CGG | - | chr4_1:61841623-61841642 | Msa0562210:three_prime_UTR | 75.0% |
| ACGGCCATCACCGCCTCCGC+CGG | + | chr4_1:61841642-61841661 | None:intergenic | 75.0% | |
| !! | GACCAGAGGCGTGCCGGCGG+AGG | - | chr4_1:61841626-61841645 | Msa0562210:three_prime_UTR | 80.0% |
| !! | CAGAGGCGTGCCGGCGGAGG+CGG | - | chr4_1:61841629-61841648 | Msa0562210:three_prime_UTR | 80.0% |
| !! | CGTGCCGGCGGAGGCGGTGA+TGG | - | chr4_1:61841635-61841654 | Msa0562210:three_prime_UTR | 80.0% |
| !! | GGCGGAGGCGGTGATGGCCG+TGG | - | chr4_1:61841641-61841660 | Msa0562210:three_prime_UTR | 80.0% |
| ! | CGCCTCCGCCGGCACGCCTC+TGG | + | chr4_1:61841631-61841650 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 61841365 | 61847513 | 61841365 | ID=Msa0562210;Name=Msa0562210 |
| chr4_1 | mRNA | 61841365 | 61847513 | 61841365 | ID=Msa0562210-mRNA-1;Parent=Msa0562210;Name=Msa0562210-mRNA-1;_AED=0.10;_eAED=0.10;_QI=256|0.8|0.81|1|1|1|11|512|322 |
| chr4_1 | exon | 61841365 | 61841969 | 61841365 | ID=Msa0562210-mRNA-1:exon:19547;Parent=Msa0562210-mRNA-1 |
| chr4_1 | exon | 61842524 | 61842601 | 61842524 | ID=Msa0562210-mRNA-1:exon:19546;Parent=Msa0562210-mRNA-1 |
| chr4_1 | exon | 61842680 | 61842733 | 61842680 | ID=Msa0562210-mRNA-1:exon:19545;Parent=Msa0562210-mRNA-1 |
| chr4_1 | exon | 61842841 | 61842970 | 61842841 | ID=Msa0562210-mRNA-1:exon:19544;Parent=Msa0562210-mRNA-1 |
| chr4_1 | exon | 61843310 | 61843355 | 61843310 | ID=Msa0562210-mRNA-1:exon:19543;Parent=Msa0562210-mRNA-1 |
| chr4_1 | exon | 61843463 | 61843535 | 61843463 | ID=Msa0562210-mRNA-1:exon:19542;Parent=Msa0562210-mRNA-1 |
| chr4_1 | exon | 61846368 | 61846439 | 61846368 | ID=Msa0562210-mRNA-1:exon:19541;Parent=Msa0562210-mRNA-1 |
| chr4_1 | exon | 61846535 | 61846645 | 61846535 | ID=Msa0562210-mRNA-1:exon:19540;Parent=Msa0562210-mRNA-1 |
| chr4_1 | exon | 61846768 | 61846820 | 61846768 | ID=Msa0562210-mRNA-1:exon:19539;Parent=Msa0562210-mRNA-1 |
| chr4_1 | exon | 61846919 | 61847009 | 61846919 | ID=Msa0562210-mRNA-1:exon:19538;Parent=Msa0562210-mRNA-1 |
| chr4_1 | exon | 61847090 | 61847513 | 61847090 | ID=Msa0562210-mRNA-1:exon:19537;Parent=Msa0562210-mRNA-1 |
| chr4_1 | five_prime_UTR | 61847258 | 61847513 | 61847258 | ID=Msa0562210-mRNA-1:five_prime_utr;Parent=Msa0562210-mRNA-1 |
| chr4_1 | CDS | 61847090 | 61847257 | 61847090 | ID=Msa0562210-mRNA-1:cds;Parent=Msa0562210-mRNA-1 |
| chr4_1 | CDS | 61846919 | 61847009 | 61846919 | ID=Msa0562210-mRNA-1:cds;Parent=Msa0562210-mRNA-1 |
| chr4_1 | CDS | 61846768 | 61846820 | 61846768 | ID=Msa0562210-mRNA-1:cds;Parent=Msa0562210-mRNA-1 |
| chr4_1 | CDS | 61846535 | 61846645 | 61846535 | ID=Msa0562210-mRNA-1:cds;Parent=Msa0562210-mRNA-1 |
| chr4_1 | CDS | 61846368 | 61846439 | 61846368 | ID=Msa0562210-mRNA-1:cds;Parent=Msa0562210-mRNA-1 |
| chr4_1 | CDS | 61843463 | 61843535 | 61843463 | ID=Msa0562210-mRNA-1:cds;Parent=Msa0562210-mRNA-1 |
| chr4_1 | CDS | 61843310 | 61843355 | 61843310 | ID=Msa0562210-mRNA-1:cds;Parent=Msa0562210-mRNA-1 |
| chr4_1 | CDS | 61842841 | 61842970 | 61842841 | ID=Msa0562210-mRNA-1:cds;Parent=Msa0562210-mRNA-1 |
| chr4_1 | CDS | 61842680 | 61842733 | 61842680 | ID=Msa0562210-mRNA-1:cds;Parent=Msa0562210-mRNA-1 |
| chr4_1 | CDS | 61842524 | 61842601 | 61842524 | ID=Msa0562210-mRNA-1:cds;Parent=Msa0562210-mRNA-1 |
| chr4_1 | CDS | 61841877 | 61841969 | 61841877 | ID=Msa0562210-mRNA-1:cds;Parent=Msa0562210-mRNA-1 |
| chr4_1 | three_prime_UTR | 61841365 | 61841876 | 61841365 | ID=Msa0562210-mRNA-1:three_prime_utr;Parent=Msa0562210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
