Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700130 | KEH20541.1 | 96.560 | 436 | 15 | 0 | 1 | 436 | 1 | 436 | 0.0 | 866 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700130 | sp|A0A2P1GIW7|SAT_CATRO | 34.180 | 433 | 235 | 11 | 2 | 416 | 4 | 404 | 1.28e-73 | 239 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700130 | A0A072TTM6 | 96.560 | 436 | 15 | 0 | 1 | 436 | 1 | 436 | 0.0 | 866 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0656330 | Msa0700130 | 0.912900 | 1.145168e-83 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700130 | MtrunA17_Chr8g0376911 | 96.560 | 436 | 15 | 0 | 1 | 436 | 1 | 436 | 0.0 | 866 |
| Msa0700130 | MtrunA17_Chr8g0376901 | 61.074 | 447 | 153 | 8 | 1 | 436 | 1 | 437 | 0.0 | 536 |
| Msa0700130 | MtrunA17_Chr5g0438701 | 59.589 | 438 | 164 | 5 | 1 | 434 | 1 | 429 | 0.0 | 518 |
| Msa0700130 | MtrunA17_Chr8g0376891 | 56.659 | 443 | 179 | 6 | 1 | 436 | 1 | 437 | 5.23e-178 | 504 |
| Msa0700130 | MtrunA17_Chr5g0438681 | 57.370 | 441 | 172 | 6 | 1 | 436 | 1 | 430 | 2.89e-174 | 494 |
| Msa0700130 | MtrunA17_Chr2g0278481 | 36.980 | 457 | 252 | 13 | 1 | 436 | 15 | 456 | 2.28e-84 | 266 |
| Msa0700130 | MtrunA17_Chr3g0123061 | 36.092 | 435 | 243 | 8 | 1 | 426 | 3 | 411 | 8.41e-84 | 263 |
| Msa0700130 | MtrunA17_Chr8g0361771 | 32.462 | 459 | 270 | 16 | 1 | 436 | 1 | 442 | 1.69e-57 | 195 |
| Msa0700130 | MtrunA17_Chr1g0199561 | 30.937 | 459 | 282 | 13 | 1 | 436 | 1 | 447 | 3.27e-55 | 189 |
| Msa0700130 | MtrunA17_Chr8g0361781 | 30.617 | 454 | 283 | 14 | 1 | 435 | 1 | 441 | 2.08e-54 | 187 |
| Msa0700130 | MtrunA17_Chr5g0438721 | 59.398 | 133 | 53 | 1 | 56 | 188 | 6 | 137 | 2.11e-52 | 172 |
| Msa0700130 | MtrunA17_Chr7g0253531 | 26.222 | 450 | 276 | 14 | 3 | 408 | 2 | 439 | 4.76e-28 | 115 |
| Msa0700130 | MtrunA17_Chr7g0253501 | 25.612 | 449 | 280 | 13 | 3 | 408 | 2 | 439 | 9.89e-28 | 114 |
| Msa0700130 | MtrunA17_Chr8g0386141 | 28.571 | 406 | 215 | 15 | 59 | 425 | 59 | 428 | 1.53e-27 | 114 |
| Msa0700130 | MtrunA17_Chr3g0113181 | 25.293 | 427 | 248 | 15 | 56 | 430 | 63 | 470 | 3.78e-26 | 110 |
| Msa0700130 | MtrunA17_Chr4g0072041 | 25.390 | 449 | 283 | 16 | 11 | 422 | 22 | 455 | 1.15e-25 | 108 |
| Msa0700130 | MtrunA17_Chr7g0270681 | 60.976 | 82 | 31 | 1 | 41 | 122 | 5 | 85 | 1.35e-25 | 99.8 |
| Msa0700130 | MtrunA17_Chr5g0438711 | 64.179 | 67 | 24 | 0 | 370 | 436 | 1 | 67 | 2.47e-25 | 98.6 |
| Msa0700130 | MtrunA17_Chr3g0087401 | 25.629 | 437 | 275 | 16 | 5 | 404 | 4 | 427 | 7.39e-25 | 106 |
| Msa0700130 | MtrunA17_Chr8g0371821 | 26.316 | 418 | 251 | 18 | 37 | 423 | 35 | 426 | 6.67e-24 | 103 |
| Msa0700130 | MtrunA17_Chr7g0253541 | 26.126 | 444 | 277 | 18 | 1 | 404 | 2 | 434 | 1.76e-23 | 102 |
| Msa0700130 | MtrunA17_Chr1g0165711 | 24.773 | 440 | 246 | 19 | 9 | 424 | 15 | 393 | 9.62e-22 | 96.7 |
| Msa0700130 | MtrunA17_Chr2g0306321 | 24.714 | 437 | 268 | 20 | 5 | 403 | 20 | 433 | 8.59e-20 | 91.3 |
| Msa0700130 | MtrunA17_Chr7g0273791 | 21.822 | 472 | 286 | 17 | 9 | 435 | 16 | 449 | 1.13e-19 | 91.3 |
| Msa0700130 | MtrunA17_Chr5g0408911 | 24.235 | 425 | 285 | 12 | 2 | 404 | 17 | 426 | 3.51e-19 | 89.4 |
| Msa0700130 | MtrunA17_Chr3g0141851 | 23.251 | 443 | 274 | 14 | 11 | 420 | 20 | 429 | 5.73e-19 | 89.0 |
| Msa0700130 | MtrunA17_Chr8g0354371 | 24.722 | 360 | 242 | 11 | 51 | 393 | 56 | 403 | 3.62e-17 | 83.2 |
| Msa0700130 | MtrunA17_Chr4g0053091 | 25.065 | 387 | 239 | 13 | 17 | 383 | 32 | 387 | 4.00e-17 | 83.2 |
| Msa0700130 | MtrunA17_Chr5g0442701 | 24.099 | 444 | 279 | 19 | 3 | 403 | 10 | 438 | 6.43e-17 | 82.8 |
| Msa0700130 | MtrunA17_Chr8g0359251 | 24.869 | 382 | 238 | 13 | 51 | 404 | 55 | 415 | 8.03e-17 | 82.4 |
| Msa0700130 | MtrunA17_Chr1g0165681 | 26.165 | 279 | 176 | 10 | 7 | 268 | 13 | 278 | 1.79e-16 | 81.3 |
| Msa0700130 | MtrunA17_Chr1g0165671 | 24.051 | 474 | 272 | 23 | 9 | 435 | 33 | 465 | 2.48e-16 | 80.9 |
| Msa0700130 | MtrunA17_Chr7g0224391 | 24.932 | 365 | 224 | 13 | 59 | 397 | 68 | 408 | 4.76e-16 | 79.7 |
| Msa0700130 | MtrunA17_Chr1g0191081 | 24.145 | 468 | 269 | 19 | 9 | 430 | 24 | 451 | 9.35e-16 | 79.0 |
| Msa0700130 | MtrunA17_Chr7g0219291 | 23.678 | 435 | 276 | 14 | 16 | 404 | 367 | 791 | 3.26e-15 | 78.2 |
| Msa0700130 | MtrunA17_Chr4g0053081 | 24.863 | 366 | 233 | 10 | 54 | 393 | 59 | 408 | 5.33e-15 | 76.6 |
| Msa0700130 | MtrunA17_Chr3g0095721 | 26.146 | 371 | 215 | 17 | 54 | 384 | 67 | 418 | 9.36e-15 | 76.3 |
| Msa0700130 | MtrunA17_Chr3g0095731 | 22.642 | 424 | 279 | 12 | 38 | 422 | 44 | 457 | 2.04e-14 | 75.1 |
| Msa0700130 | MtrunA17_Chr4g0027071 | 25.478 | 471 | 263 | 22 | 11 | 427 | 20 | 456 | 2.53e-14 | 74.7 |
| Msa0700130 | MtrunA17_Chr6g0455361 | 23.991 | 446 | 274 | 16 | 16 | 419 | 27 | 449 | 3.54e-14 | 74.3 |
| Msa0700130 | MtrunA17_Chr4g0053111 | 21.684 | 392 | 251 | 13 | 41 | 397 | 44 | 414 | 9.87e-14 | 72.8 |
| Msa0700130 | MtrunA17_Chr8g0374641 | 23.450 | 371 | 237 | 14 | 52 | 392 | 52 | 405 | 2.24e-13 | 71.6 |
| Msa0700130 | MtrunA17_Chr7g0273721 | 22.101 | 457 | 283 | 19 | 9 | 424 | 17 | 441 | 2.53e-13 | 71.6 |
| Msa0700130 | MtrunA17_Chr4g0053061 | 23.483 | 379 | 253 | 14 | 53 | 402 | 81 | 451 | 1.36e-12 | 69.3 |
| Msa0700130 | MtrunA17_Chr3g0113821 | 24.060 | 399 | 259 | 14 | 11 | 383 | 13 | 393 | 1.48e-12 | 68.9 |
| Msa0700130 | MtrunA17_Chr4g0010121 | 24.282 | 383 | 239 | 17 | 52 | 403 | 92 | 454 | 1.87e-12 | 68.9 |
| Msa0700130 | MtrunA17_Chr7g0219121 | 24.944 | 445 | 271 | 17 | 15 | 404 | 17 | 453 | 2.05e-12 | 68.9 |
| Msa0700130 | MtrunA17_Chr4g0004701 | 27.536 | 207 | 132 | 5 | 216 | 404 | 12 | 218 | 2.12e-12 | 66.6 |
| Msa0700130 | MtrunA17_Chr4g0010311 | 25.824 | 364 | 226 | 19 | 53 | 386 | 49 | 398 | 1.92e-11 | 65.9 |
| Msa0700130 | MtrunA17_Chr4g0010331 | 24.654 | 361 | 230 | 18 | 52 | 386 | 48 | 392 | 4.56e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700130 | AT3G26040.1 | 36.044 | 455 | 252 | 12 | 1 | 436 | 1 | 435 | 2.97e-89 | 278 |
| Msa0700130 | AT1G24430.1 | 34.292 | 452 | 258 | 14 | 1 | 436 | 3 | 431 | 1.22e-71 | 232 |
| Msa0700130 | AT1G24420.2 | 37.168 | 452 | 245 | 16 | 3 | 436 | 5 | 435 | 2.16e-71 | 232 |
| Msa0700130 | AT1G24420.1 | 37.168 | 452 | 245 | 16 | 3 | 436 | 5 | 435 | 2.16e-71 | 232 |
| Msa0700130 | AT4G15390.1 | 33.040 | 454 | 272 | 13 | 1 | 436 | 6 | 445 | 1.24e-69 | 228 |
| Msa0700130 | AT4G15390.2 | 33.040 | 454 | 272 | 13 | 1 | 436 | 6 | 445 | 1.24e-69 | 228 |
| Msa0700130 | AT3G30280.1 | 32.450 | 453 | 275 | 14 | 1 | 436 | 4 | 442 | 1.98e-66 | 219 |
| Msa0700130 | AT5G47980.1 | 33.407 | 452 | 273 | 16 | 1 | 436 | 3 | 442 | 1.06e-63 | 212 |
| Msa0700130 | AT5G47950.1 | 32.159 | 454 | 258 | 16 | 1 | 436 | 4 | 425 | 2.40e-62 | 208 |
| Msa0700130 | AT5G23970.1 | 31.072 | 457 | 264 | 18 | 1 | 436 | 1 | 427 | 2.14e-58 | 197 |
| Msa0700130 | AT4G15400.1 | 31.579 | 456 | 266 | 18 | 2 | 436 | 4 | 434 | 1.92e-47 | 169 |
| Msa0700130 | AT2G19070.1 | 28.000 | 425 | 266 | 15 | 11 | 404 | 12 | 427 | 3.00e-33 | 130 |
| Msa0700130 | AT5G48930.1 | 23.110 | 463 | 279 | 16 | 1 | 421 | 1 | 428 | 6.59e-24 | 103 |
| Msa0700130 | AT3G50280.1 | 26.891 | 357 | 223 | 15 | 52 | 383 | 52 | 395 | 1.31e-21 | 97.1 |
| Msa0700130 | AT3G48720.1 | 24.667 | 450 | 273 | 21 | 5 | 420 | 8 | 425 | 5.67e-21 | 95.1 |
| Msa0700130 | AT5G41040.2 | 25.729 | 377 | 208 | 15 | 59 | 397 | 69 | 411 | 9.20e-20 | 91.7 |
| Msa0700130 | AT5G41040.1 | 25.729 | 377 | 208 | 15 | 59 | 397 | 85 | 427 | 9.90e-20 | 91.7 |
| Msa0700130 | AT5G67150.1 | 25.000 | 408 | 267 | 14 | 2 | 383 | 4 | 398 | 2.90e-19 | 90.1 |
| Msa0700130 | AT5G63560.1 | 23.937 | 447 | 276 | 18 | 5 | 420 | 8 | 421 | 3.29e-19 | 89.7 |
| Msa0700130 | AT4G31910.1 | 25.172 | 437 | 238 | 17 | 41 | 419 | 46 | 451 | 9.36e-18 | 85.5 |
| Msa0700130 | AT1G65450.1 | 23.559 | 399 | 242 | 17 | 59 | 421 | 72 | 443 | 3.91e-17 | 83.6 |
| Msa0700130 | AT1G78990.1 | 25.723 | 346 | 220 | 13 | 59 | 382 | 67 | 397 | 4.42e-16 | 80.5 |
| Msa0700130 | AT5G38130.1 | 25.600 | 375 | 231 | 16 | 52 | 397 | 72 | 427 | 4.61e-16 | 80.5 |
| Msa0700130 | AT5G17540.1 | 22.926 | 458 | 276 | 20 | 9 | 424 | 15 | 437 | 6.36e-16 | 80.1 |
| Msa0700130 | AT1G03390.1 | 23.206 | 418 | 254 | 20 | 6 | 383 | 19 | 409 | 1.08e-15 | 79.3 |
| Msa0700130 | AT5G57840.1 | 22.595 | 447 | 305 | 16 | 1 | 421 | 1 | 432 | 1.68e-15 | 78.6 |
| Msa0700130 | AT3G03480.1 | 23.023 | 430 | 237 | 21 | 8 | 390 | 24 | 406 | 5.12e-15 | 77.4 |
Find 91 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTCACATTCTGGGAAATT+TGG | 0.164798 | 4_4:+71026062 | None:intergenic |
| ATTCTTGAGGTGTGAGATTT+TGG | 0.186893 | 4_4:+71026511 | None:intergenic |
| CCGATGTATGAAGCTGATTT+TGG | 0.207802 | 4_4:-71025567 | Msa0700130:CDS |
| TCTATTACAAACTCACATTC+TGG | 0.246799 | 4_4:+71026053 | None:intergenic |
| TTCTCCTTCGCTATTCAATT+TGG | 0.251393 | 4_4:+71026163 | None:intergenic |
| TCTTTCCCTGCAAATTTCTT+TGG | 0.253467 | 4_4:+71025696 | None:intergenic |
| ATTTGTGTTTGAAGCTTCTA+AGG | 0.271551 | 4_4:-71026009 | Msa0700130:CDS |
| AGCTTCAAACACAAATCTTT+TGG | 0.272043 | 4_4:+71026016 | None:intergenic |
| CTTTCAACTTCATGAATGAT+TGG | 0.304970 | 4_4:-71026187 | Msa0700130:CDS |
| TTGGATGGGGAAAACCGATA+TGG | 0.308270 | 4_4:-71025548 | Msa0700130:CDS |
| TTCTTCCATTGTAATTCATC+AGG | 0.324345 | 4_4:+71026317 | None:intergenic |
| AATACCAAGTCATGTAGTTC+CGG | 0.332848 | 4_4:+71025759 | None:intergenic |
| ATGTGATCTATGAAAGAGAT+AGG | 0.337365 | 4_4:+71026599 | None:intergenic |
| TCCATATACTACCCCTTTGC+AGG | 0.339333 | 4_4:-71026470 | Msa0700130:CDS |
| ACAAGTTACTACACCGGTTT+CGG | 0.350311 | 4_4:-71025640 | Msa0700130:CDS |
| GCCTGCAAAGGGGTAGTATA+TGG | 0.353376 | 4_4:+71026469 | None:intergenic |
| GTTTATCCAAAGAAATTTGC+AGG | 0.360964 | 4_4:-71025702 | Msa0700130:CDS |
| TAAGTCCATGATGGTAAATC+TGG | 0.361121 | 4_4:-71025976 | Msa0700130:CDS |
| AAGAGATAGGGAAATTTCTA+AGG | 0.388890 | 4_4:+71026612 | None:intergenic |
| TGGGGTGGAGTTGGTGATGA+GGG | 0.400236 | 4_4:+71026635 | None:intergenic |
| AGTGTGTAGGGAACATAGTT+TGG | 0.402810 | 4_4:-71025800 | Msa0700130:CDS |
| TTTCTAAGGTGGGGTGGAGT+TGG | 0.410642 | 4_4:+71026626 | None:intergenic |
| TTTCAACTTCATGAATGATT+GGG | 0.416199 | 4_4:-71026186 | Msa0700130:CDS |
| ATACCAAGTCATGTAGTTCC+GGG | 0.423875 | 4_4:+71025760 | None:intergenic |
| GTGGGGTGGAGTTGGTGATG+AGG | 0.450272 | 4_4:+71026634 | None:intergenic |
| GTTTGATTGTTTATGCTAGT+TGG | 0.451953 | 4_4:-71025599 | Msa0700130:CDS |
| TCTTTGAACCTGCCTGCAAA+GGG | 0.453526 | 4_4:+71026458 | None:intergenic |
| CTATTACAAACTCACATTCT+GGG | 0.456233 | 4_4:+71026054 | None:intergenic |
| TATCATCGTAAAAGAAAAGT+AGG | 0.461959 | 4_4:+71026555 | None:intergenic |
| TGGATGGGGAAAACCGATAT+GGG | 0.462617 | 4_4:-71025547 | Msa0700130:CDS |
| TCCTGCATGAAGTAAATTGT+AGG | 0.464671 | 4_4:+71026112 | None:intergenic |
| GATAGGGAAATTTCTAAGGT+GGG | 0.469619 | 4_4:+71026616 | None:intergenic |
| TACAATGGAAGAACATGGAT+TGG | 0.478008 | 4_4:-71026307 | Msa0700130:CDS |
| ATCTTTGAACCTGCCTGCAA+AGG | 0.478471 | 4_4:+71026457 | None:intergenic |
| GAAATTTGCAGGGAAAGAAA+AGG | 0.492493 | 4_4:-71025691 | Msa0700130:CDS |
| CACTGTCTGATAAGTGTGTA+GGG | 0.492717 | 4_4:-71025812 | Msa0700130:CDS |
| TTATAATCACTCTCCGAAAC+CGG | 0.495695 | 4_4:+71025627 | None:intergenic |
| AACCTAGTGAGATATGGAAA+TGG | 0.498413 | 4_4:-71026684 | None:intergenic |
| GTAATTCATCAGGGAACAAA+GGG | 0.498617 | 4_4:+71026327 | None:intergenic |
| TATACTACCCCTTTGCAGGC+AGG | 0.502052 | 4_4:-71026466 | Msa0700130:CDS |
| TAAGTGTGTGGTTTCTGCAT+TGG | 0.503085 | 4_4:-71025898 | Msa0700130:CDS |
| GTACTAGTTGTCACCCATAT+CGG | 0.503476 | 4_4:+71025534 | None:intergenic |
| CCCTACAATTTACTTCATGC+AGG | 0.509113 | 4_4:-71026113 | Msa0700130:CDS |
| ATCATCGTAAAAGAAAAGTA+GGG | 0.509382 | 4_4:+71026556 | None:intergenic |
| CAACCCGGAACTACATGACT+TGG | 0.515523 | 4_4:-71025763 | Msa0700130:CDS |
| CAAAACGACATCGCTTCGCA+TGG | 0.522509 | 4_4:-71025865 | Msa0700130:CDS |
| GGTTAGATTTGAACGAGAAG+TGG | 0.532468 | 4_4:-71025424 | Msa0700130:CDS |
| TTTCTAGTTGCAAATATCGC+AGG | 0.535623 | 4_4:-71026398 | Msa0700130:CDS |
| ATGGATACAAGAAATGGAGA+TGG | 0.538458 | 4_4:-71025483 | Msa0700130:CDS |
| AGATAGGGAAATTTCTAAGG+TGG | 0.541407 | 4_4:+71026615 | None:intergenic |
| TGTAATTCATCAGGGAACAA+AGG | 0.542689 | 4_4:+71026326 | None:intergenic |
| GACATCGCTTCGCATGGCTG+TGG | 0.547958 | 4_4:-71025859 | Msa0700130:CDS |
| AAAGTAGGGGCACATAGTTA+CGG | 0.549881 | 4_4:+71026570 | None:intergenic |
| ACCTTGATCGTTACATTCGA+TGG | 0.556319 | 4_4:+71026427 | None:intergenic |
| CCTGCATGAAGTAAATTGTA+GGG | 0.557210 | 4_4:+71026113 | None:intergenic |
| CAAAATTATAGACGCTGCAA+CGG | 0.559345 | 4_4:-71026210 | Msa0700130:CDS |
| TTTGAGATAAAGAATTCTTG+AGG | 0.564533 | 4_4:+71026498 | None:intergenic |
| GGGAAATTTCTAAGGTGGGG+TGG | 0.565334 | 4_4:+71026620 | None:intergenic |
| TGTGGATCTTCGTAGAAGAA+TGG | 0.565376 | 4_4:-71025841 | Msa0700130:CDS |
| CCACTGTCTGATAAGTGTGT+AGG | 0.568598 | 4_4:-71025813 | Msa0700130:CDS |
| TGAATCCAGATTTACCATCA+TGG | 0.569462 | 4_4:+71025971 | None:intergenic |
| TGTGATCTATGAAAGAGATA+GGG | 0.570467 | 4_4:+71026600 | None:intergenic |
| CTTAAAACAAGTTACTACAC+CGG | 0.579115 | 4_4:-71025646 | Msa0700130:CDS |
| AAAGTTACTTAAGTCCATGA+TGG | 0.580203 | 4_4:-71025985 | Msa0700130:CDS |
| TCCATCGAATGTAACGATCA+AGG | 0.583886 | 4_4:-71026428 | Msa0700130:CDS |
| TCTTCCATTGTAATTCATCA+GGG | 0.587466 | 4_4:+71026318 | None:intergenic |
| CCAAAATCAGCTTCATACAT+CGG | 0.589060 | 4_4:+71025567 | None:intergenic |
| TTTATCCAAAGAAATTTGCA+GGG | 0.591630 | 4_4:-71025701 | Msa0700130:CDS |
| ACATCATATCAAACAATACT+CGG | 0.595620 | 4_4:+71025375 | None:intergenic |
| TGCAATGATTTATAAGTGTG+TGG | 0.599319 | 4_4:-71025910 | Msa0700130:CDS |
| AGTGACAACTTCTACACGTG+TGG | 0.613702 | 4_4:+71025932 | None:intergenic |
| GTTCTTGTTTGTTATCAACC+CGG | 0.616177 | 4_4:-71025778 | Msa0700130:CDS |
| AACAATACTCGGATTAAGAG+AGG | 0.618426 | 4_4:+71025386 | None:intergenic |
| TGGGCCAAATTGAATAGCGA+AGG | 0.623888 | 4_4:-71026167 | Msa0700130:CDS |
| TGAATTACAATGGAAGAACA+TGG | 0.628831 | 4_4:-71026312 | Msa0700130:CDS |
| ATAGGGAAATTTCTAAGGTG+GGG | 0.632477 | 4_4:+71026617 | None:intergenic |
| TTGGTATTCAAAATTAGACA+AGG | 0.635078 | 4_4:-71025744 | Msa0700130:CDS |
| AAATTTGGCAAACTCCCTCG+TGG | 0.644808 | 4_4:+71026077 | None:intergenic |
| AATTTGGCAAACTCCCTCGT+GGG | 0.645915 | 4_4:+71026078 | None:intergenic |
| TGTTCCCTGATGAATTACAA+TGG | 0.646300 | 4_4:-71026322 | Msa0700130:CDS |
| TCATCGTAAAAGAAAAGTAG+GGG | 0.646720 | 4_4:+71026557 | None:intergenic |
| GTGACAACTTCTACACGTGT+GGG | 0.646828 | 4_4:+71025933 | None:intergenic |
| TGGTATTCAAAATTAGACAA+GGG | 0.652202 | 4_4:-71025743 | Msa0700130:CDS |
| GATTAAGAGAGGCATACTGA+AGG | 0.662777 | 4_4:+71025397 | None:intergenic |
| CCTACACACTTATCAGACAG+TGG | 0.701128 | 4_4:+71025813 | None:intergenic |
| GGTAAATCTGGATTCACATG+AGG | 0.704642 | 4_4:-71025964 | Msa0700130:CDS |
| CTTTGAACCTGCCTGCAAAG+GGG | 0.706152 | 4_4:+71026459 | None:intergenic |
| GAGATACAATATTCCCACGA+GGG | 0.719170 | 4_4:-71026091 | Msa0700130:CDS |
| ACACACTTATCAGACAGTGG+AGG | 0.730201 | 4_4:+71025816 | None:intergenic |
| GGAGATACAATATTCCCACG+AGG | 0.760478 | 4_4:-71026092 | Msa0700130:CDS |
| GAATATGAAAGAGAGTGACA+TGG | 0.783909 | 4_4:-71025445 | Msa0700130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATCATCGTAAAAGAAAAGTA+GGG | + | chr4_4:71025501-71025520 | None:intergenic | 25.0% |
| ! | TATCATCGTAAAAGAAAAGT+AGG | + | chr4_4:71025502-71025521 | None:intergenic | 25.0% |
| !! | TTTGAGATAAAGAATTCTTG+AGG | + | chr4_4:71025559-71025578 | None:intergenic | 25.0% |
| ! | TTTCAACTTCATGAATGATT+GGG | - | chr4_4:71025868-71025887 | Msa0700130:CDS | 25.0% |
| ! | TTGGTATTCAAAATTAGACA+AGG | - | chr4_4:71026310-71026329 | Msa0700130:CDS | 25.0% |
| ! | TGGTATTCAAAATTAGACAA+GGG | - | chr4_4:71026311-71026330 | Msa0700130:CDS | 25.0% |
| ! | TTTATCCAAAGAAATTTGCA+GGG | - | chr4_4:71026353-71026372 | Msa0700130:CDS | 25.0% |
| !! | AAAACTATTGCATTTTTCAC+AGG | + | chr4_4:71026550-71026569 | None:intergenic | 25.0% |
| !!! | GAAAAATGCAATAGTTTTGA+TGG | - | chr4_4:71026552-71026571 | Msa0700130:CDS | 25.0% |
| ! | ATCATCGTAAAAGAAAAGTA+GGG | + | chr4_4:71025501-71025520 | None:intergenic | 25.0% |
| ! | TATCATCGTAAAAGAAAAGT+AGG | + | chr4_4:71025502-71025521 | None:intergenic | 25.0% |
| !! | TTTGAGATAAAGAATTCTTG+AGG | + | chr4_4:71025559-71025578 | None:intergenic | 25.0% |
| ! | TTTCAACTTCATGAATGATT+GGG | - | chr4_4:71025868-71025887 | Msa0700130:CDS | 25.0% |
| ! | TTGGTATTCAAAATTAGACA+AGG | - | chr4_4:71026310-71026329 | Msa0700130:CDS | 25.0% |
| ! | TGGTATTCAAAATTAGACAA+GGG | - | chr4_4:71026311-71026330 | Msa0700130:CDS | 25.0% |
| ! | TTTATCCAAAGAAATTTGCA+GGG | - | chr4_4:71026353-71026372 | Msa0700130:CDS | 25.0% |
| !! | AAAACTATTGCATTTTTCAC+AGG | + | chr4_4:71026550-71026569 | None:intergenic | 25.0% |
| !!! | GAAAAATGCAATAGTTTTGA+TGG | - | chr4_4:71026552-71026571 | Msa0700130:CDS | 25.0% |
| AAGAGATAGGGAAATTTCTA+AGG | + | chr4_4:71025445-71025464 | None:intergenic | 30.0% | |
| TGTGATCTATGAAAGAGATA+GGG | + | chr4_4:71025457-71025476 | None:intergenic | 30.0% | |
| ATGTGATCTATGAAAGAGAT+AGG | + | chr4_4:71025458-71025477 | None:intergenic | 30.0% | |
| TCATCGTAAAAGAAAAGTAG+GGG | + | chr4_4:71025500-71025519 | None:intergenic | 30.0% | |
| ! | CAAAGGGTTAAGCAAATTTT+CGG | + | chr4_4:71025714-71025733 | None:intergenic | 30.0% |
| TCTTCCATTGTAATTCATCA+GGG | + | chr4_4:71025739-71025758 | None:intergenic | 30.0% | |
| TTCTTCCATTGTAATTCATC+AGG | + | chr4_4:71025740-71025759 | None:intergenic | 30.0% | |
| TGAATTACAATGGAAGAACA+TGG | - | chr4_4:71025742-71025761 | Msa0700130:CDS | 30.0% | |
| !! | CAAATCAATTGTTTTGCATG+TGG | - | chr4_4:71025791-71025810 | Msa0700130:CDS | 30.0% |
| CTTTCAACTTCATGAATGAT+TGG | - | chr4_4:71025867-71025886 | Msa0700130:CDS | 30.0% | |
| CTATTACAAACTCACATTCT+GGG | + | chr4_4:71026003-71026022 | None:intergenic | 30.0% | |
| TCTATTACAAACTCACATTC+TGG | + | chr4_4:71026004-71026023 | None:intergenic | 30.0% | |
| ! | AGCTTCAAACACAAATCTTT+TGG | + | chr4_4:71026041-71026060 | None:intergenic | 30.0% |
| ! | ATTTGTGTTTGAAGCTTCTA+AGG | - | chr4_4:71026045-71026064 | Msa0700130:CDS | 30.0% |
| AAAGTTACTTAAGTCCATGA+TGG | - | chr4_4:71026069-71026088 | Msa0700130:CDS | 30.0% | |
| TGCAATGATTTATAAGTGTG+TGG | - | chr4_4:71026144-71026163 | Msa0700130:CDS | 30.0% | |
| GTTTATCCAAAGAAATTTGC+AGG | - | chr4_4:71026352-71026371 | Msa0700130:CDS | 30.0% | |
| CTTAAAACAAGTTACTACAC+CGG | - | chr4_4:71026408-71026427 | Msa0700130:CDS | 30.0% | |
| GTTTGATTGTTTATGCTAGT+TGG | - | chr4_4:71026455-71026474 | Msa0700130:CDS | 30.0% | |
| !! | GTTTTGATGGATACAAGAAA+TGG | - | chr4_4:71026565-71026584 | Msa0700130:CDS | 30.0% |
| AAGAGATAGGGAAATTTCTA+AGG | + | chr4_4:71025445-71025464 | None:intergenic | 30.0% | |
| TGTGATCTATGAAAGAGATA+GGG | + | chr4_4:71025457-71025476 | None:intergenic | 30.0% | |
| ATGTGATCTATGAAAGAGAT+AGG | + | chr4_4:71025458-71025477 | None:intergenic | 30.0% | |
| TCATCGTAAAAGAAAAGTAG+GGG | + | chr4_4:71025500-71025519 | None:intergenic | 30.0% | |
| ! | CAAAGGGTTAAGCAAATTTT+CGG | + | chr4_4:71025714-71025733 | None:intergenic | 30.0% |
| TCTTCCATTGTAATTCATCA+GGG | + | chr4_4:71025739-71025758 | None:intergenic | 30.0% | |
| TTCTTCCATTGTAATTCATC+AGG | + | chr4_4:71025740-71025759 | None:intergenic | 30.0% | |
| TGAATTACAATGGAAGAACA+TGG | - | chr4_4:71025742-71025761 | Msa0700130:CDS | 30.0% | |
| !! | CAAATCAATTGTTTTGCATG+TGG | - | chr4_4:71025791-71025810 | Msa0700130:CDS | 30.0% |
| CTTTCAACTTCATGAATGAT+TGG | - | chr4_4:71025867-71025886 | Msa0700130:CDS | 30.0% | |
| CTATTACAAACTCACATTCT+GGG | + | chr4_4:71026003-71026022 | None:intergenic | 30.0% | |
| TCTATTACAAACTCACATTC+TGG | + | chr4_4:71026004-71026023 | None:intergenic | 30.0% | |
| ! | AGCTTCAAACACAAATCTTT+TGG | + | chr4_4:71026041-71026060 | None:intergenic | 30.0% |
| ! | ATTTGTGTTTGAAGCTTCTA+AGG | - | chr4_4:71026045-71026064 | Msa0700130:CDS | 30.0% |
| AAAGTTACTTAAGTCCATGA+TGG | - | chr4_4:71026069-71026088 | Msa0700130:CDS | 30.0% | |
| TGCAATGATTTATAAGTGTG+TGG | - | chr4_4:71026144-71026163 | Msa0700130:CDS | 30.0% | |
| GTTTATCCAAAGAAATTTGC+AGG | - | chr4_4:71026352-71026371 | Msa0700130:CDS | 30.0% | |
| CTTAAAACAAGTTACTACAC+CGG | - | chr4_4:71026408-71026427 | Msa0700130:CDS | 30.0% | |
| GTTTGATTGTTTATGCTAGT+TGG | - | chr4_4:71026455-71026474 | Msa0700130:CDS | 30.0% | |
| !! | GTTTTGATGGATACAAGAAA+TGG | - | chr4_4:71026565-71026584 | Msa0700130:CDS | 30.0% |
| !! | ATAGGGAAATTTCTAAGGTG+GGG | + | chr4_4:71025440-71025459 | None:intergenic | 35.0% |
| !! | GATAGGGAAATTTCTAAGGT+GGG | + | chr4_4:71025441-71025460 | None:intergenic | 35.0% |
| ! | AGATAGGGAAATTTCTAAGG+TGG | + | chr4_4:71025442-71025461 | None:intergenic | 35.0% |
| ! | ATTCTTGAGGTGTGAGATTT+TGG | + | chr4_4:71025546-71025565 | None:intergenic | 35.0% |
| !! | TTTCTAGTTGCAAATATCGC+AGG | - | chr4_4:71025656-71025675 | Msa0700130:CDS | 35.0% |
| GTAATTCATCAGGGAACAAA+GGG | + | chr4_4:71025730-71025749 | None:intergenic | 35.0% | |
| TGTAATTCATCAGGGAACAA+AGG | + | chr4_4:71025731-71025750 | None:intergenic | 35.0% | |
| TGTTCCCTGATGAATTACAA+TGG | - | chr4_4:71025732-71025751 | Msa0700130:CDS | 35.0% | |
| TACAATGGAAGAACATGGAT+TGG | - | chr4_4:71025747-71025766 | Msa0700130:CDS | 35.0% | |
| !! | ATCAATTGTTTTGCATGTGG+AGG | - | chr4_4:71025794-71025813 | Msa0700130:CDS | 35.0% |
| CAAAATTATAGACGCTGCAA+CGG | - | chr4_4:71025844-71025863 | Msa0700130:CDS | 35.0% | |
| TTCTCCTTCGCTATTCAATT+TGG | + | chr4_4:71025894-71025913 | None:intergenic | 35.0% | |
| CCTGCATGAAGTAAATTGTA+GGG | + | chr4_4:71025944-71025963 | None:intergenic | 35.0% | |
| TCCTGCATGAAGTAAATTGT+AGG | + | chr4_4:71025945-71025964 | None:intergenic | 35.0% | |
| ! | AACTCACATTCTGGGAAATT+TGG | + | chr4_4:71025995-71026014 | None:intergenic | 35.0% |
| TAAGTCCATGATGGTAAATC+TGG | - | chr4_4:71026078-71026097 | Msa0700130:CDS | 35.0% | |
| TGAATCCAGATTTACCATCA+TGG | + | chr4_4:71026086-71026105 | None:intergenic | 35.0% | |
| !! | GTTCTTGTTTGTTATCAACC+CGG | - | chr4_4:71026276-71026295 | Msa0700130:CDS | 35.0% |
| AATACCAAGTCATGTAGTTC+CGG | + | chr4_4:71026298-71026317 | None:intergenic | 35.0% | |
| TCTTTCCCTGCAAATTTCTT+TGG | + | chr4_4:71026361-71026380 | None:intergenic | 35.0% | |
| GAAATTTGCAGGGAAAGAAA+AGG | - | chr4_4:71026363-71026382 | Msa0700130:CDS | 35.0% | |
| TTATAATCACTCTCCGAAAC+CGG | + | chr4_4:71026430-71026449 | None:intergenic | 35.0% | |
| CCAAAATCAGCTTCATACAT+CGG | + | chr4_4:71026490-71026509 | None:intergenic | 35.0% | |
| !! | TGTATGAAGCTGATTTTGGA+TGG | - | chr4_4:71026491-71026510 | Msa0700130:CDS | 35.0% |
| !! | GTATGAAGCTGATTTTGGAT+GGG | - | chr4_4:71026492-71026511 | Msa0700130:CDS | 35.0% |
| !! | TATGAAGCTGATTTTGGATG+GGG | - | chr4_4:71026493-71026512 | Msa0700130:CDS | 35.0% |
| ATGGATACAAGAAATGGAGA+TGG | - | chr4_4:71026571-71026590 | Msa0700130:CDS | 35.0% | |
| GAATATGAAAGAGAGTGACA+TGG | - | chr4_4:71026609-71026628 | Msa0700130:CDS | 35.0% | |
| AACAATACTCGGATTAAGAG+AGG | + | chr4_4:71026671-71026690 | None:intergenic | 35.0% | |
| !! | ATAGGGAAATTTCTAAGGTG+GGG | + | chr4_4:71025440-71025459 | None:intergenic | 35.0% |
| !! | GATAGGGAAATTTCTAAGGT+GGG | + | chr4_4:71025441-71025460 | None:intergenic | 35.0% |
| ! | AGATAGGGAAATTTCTAAGG+TGG | + | chr4_4:71025442-71025461 | None:intergenic | 35.0% |
| ! | ATTCTTGAGGTGTGAGATTT+TGG | + | chr4_4:71025546-71025565 | None:intergenic | 35.0% |
| !! | TTTCTAGTTGCAAATATCGC+AGG | - | chr4_4:71025656-71025675 | Msa0700130:CDS | 35.0% |
| GTAATTCATCAGGGAACAAA+GGG | + | chr4_4:71025730-71025749 | None:intergenic | 35.0% | |
| TGTAATTCATCAGGGAACAA+AGG | + | chr4_4:71025731-71025750 | None:intergenic | 35.0% | |
| TGTTCCCTGATGAATTACAA+TGG | - | chr4_4:71025732-71025751 | Msa0700130:CDS | 35.0% | |
| TACAATGGAAGAACATGGAT+TGG | - | chr4_4:71025747-71025766 | Msa0700130:CDS | 35.0% | |
| !! | ATCAATTGTTTTGCATGTGG+AGG | - | chr4_4:71025794-71025813 | Msa0700130:CDS | 35.0% |
| CAAAATTATAGACGCTGCAA+CGG | - | chr4_4:71025844-71025863 | Msa0700130:CDS | 35.0% | |
| TTCTCCTTCGCTATTCAATT+TGG | + | chr4_4:71025894-71025913 | None:intergenic | 35.0% | |
| CCTGCATGAAGTAAATTGTA+GGG | + | chr4_4:71025944-71025963 | None:intergenic | 35.0% | |
| TCCTGCATGAAGTAAATTGT+AGG | + | chr4_4:71025945-71025964 | None:intergenic | 35.0% | |
| ! | AACTCACATTCTGGGAAATT+TGG | + | chr4_4:71025995-71026014 | None:intergenic | 35.0% |
| TAAGTCCATGATGGTAAATC+TGG | - | chr4_4:71026078-71026097 | Msa0700130:CDS | 35.0% | |
| TGAATCCAGATTTACCATCA+TGG | + | chr4_4:71026086-71026105 | None:intergenic | 35.0% | |
| !! | GTTCTTGTTTGTTATCAACC+CGG | - | chr4_4:71026276-71026295 | Msa0700130:CDS | 35.0% |
| AATACCAAGTCATGTAGTTC+CGG | + | chr4_4:71026298-71026317 | None:intergenic | 35.0% | |
| TCTTTCCCTGCAAATTTCTT+TGG | + | chr4_4:71026361-71026380 | None:intergenic | 35.0% | |
| GAAATTTGCAGGGAAAGAAA+AGG | - | chr4_4:71026363-71026382 | Msa0700130:CDS | 35.0% | |
| TTATAATCACTCTCCGAAAC+CGG | + | chr4_4:71026430-71026449 | None:intergenic | 35.0% | |
| CCAAAATCAGCTTCATACAT+CGG | + | chr4_4:71026490-71026509 | None:intergenic | 35.0% | |
| !! | TGTATGAAGCTGATTTTGGA+TGG | - | chr4_4:71026491-71026510 | Msa0700130:CDS | 35.0% |
| !! | GTATGAAGCTGATTTTGGAT+GGG | - | chr4_4:71026492-71026511 | Msa0700130:CDS | 35.0% |
| !! | TATGAAGCTGATTTTGGATG+GGG | - | chr4_4:71026493-71026512 | Msa0700130:CDS | 35.0% |
| ATGGATACAAGAAATGGAGA+TGG | - | chr4_4:71026571-71026590 | Msa0700130:CDS | 35.0% | |
| GAATATGAAAGAGAGTGACA+TGG | - | chr4_4:71026609-71026628 | Msa0700130:CDS | 35.0% | |
| AACAATACTCGGATTAAGAG+AGG | + | chr4_4:71026671-71026690 | None:intergenic | 35.0% | |
| ! | AAAGTAGGGGCACATAGTTA+CGG | + | chr4_4:71025487-71025506 | None:intergenic | 40.0% |
| TCCATCGAATGTAACGATCA+AGG | - | chr4_4:71025626-71025645 | Msa0700130:CDS | 40.0% | |
| ACCTTGATCGTTACATTCGA+TGG | + | chr4_4:71025630-71025649 | None:intergenic | 40.0% | |
| ! | AATTTTCGGTGGGGTTTTTG+AGG | + | chr4_4:71025700-71025719 | None:intergenic | 40.0% |
| ! | GGTTAAGCAAATTTTCGGTG+GGG | + | chr4_4:71025709-71025728 | None:intergenic | 40.0% |
| ! | GGGTTAAGCAAATTTTCGGT+GGG | + | chr4_4:71025710-71025729 | None:intergenic | 40.0% |
| ! | AGGGTTAAGCAAATTTTCGG+TGG | + | chr4_4:71025711-71025730 | None:intergenic | 40.0% |
| CCCTACAATTTACTTCATGC+AGG | - | chr4_4:71025941-71025960 | Msa0700130:CDS | 40.0% | |
| GAGATACAATATTCCCACGA+GGG | - | chr4_4:71025963-71025982 | Msa0700130:CDS | 40.0% | |
| GGTAAATCTGGATTCACATG+AGG | - | chr4_4:71026090-71026109 | Msa0700130:CDS | 40.0% | |
| TAAGTGTGTGGTTTCTGCAT+TGG | - | chr4_4:71026156-71026175 | Msa0700130:CDS | 40.0% | |
| TGTGGATCTTCGTAGAAGAA+TGG | - | chr4_4:71026213-71026232 | Msa0700130:CDS | 40.0% | |
| CACTGTCTGATAAGTGTGTA+GGG | - | chr4_4:71026242-71026261 | Msa0700130:CDS | 40.0% | |
| AGTGTGTAGGGAACATAGTT+TGG | - | chr4_4:71026254-71026273 | Msa0700130:CDS | 40.0% | |
| ATACCAAGTCATGTAGTTCC+GGG | + | chr4_4:71026297-71026316 | None:intergenic | 40.0% | |
| !! | ACAAGTTACTACACCGGTTT+CGG | - | chr4_4:71026414-71026433 | Msa0700130:CDS | 40.0% |
| !! | CCGATGTATGAAGCTGATTT+TGG | - | chr4_4:71026487-71026506 | Msa0700130:CDS | 40.0% |
| GTACTAGTTGTCACCCATAT+CGG | + | chr4_4:71026523-71026542 | None:intergenic | 40.0% | |
| GGTTAGATTTGAACGAGAAG+TGG | - | chr4_4:71026630-71026649 | Msa0700130:CDS | 40.0% | |
| ! | GATTAAGAGAGGCATACTGA+AGG | + | chr4_4:71026660-71026679 | None:intergenic | 40.0% |
| ! | AAAGTAGGGGCACATAGTTA+CGG | + | chr4_4:71025487-71025506 | None:intergenic | 40.0% |
| TCCATCGAATGTAACGATCA+AGG | - | chr4_4:71025626-71025645 | Msa0700130:CDS | 40.0% | |
| ACCTTGATCGTTACATTCGA+TGG | + | chr4_4:71025630-71025649 | None:intergenic | 40.0% | |
| ! | AATTTTCGGTGGGGTTTTTG+AGG | + | chr4_4:71025700-71025719 | None:intergenic | 40.0% |
| ! | GGTTAAGCAAATTTTCGGTG+GGG | + | chr4_4:71025709-71025728 | None:intergenic | 40.0% |
| ! | GGGTTAAGCAAATTTTCGGT+GGG | + | chr4_4:71025710-71025729 | None:intergenic | 40.0% |
| ! | AGGGTTAAGCAAATTTTCGG+TGG | + | chr4_4:71025711-71025730 | None:intergenic | 40.0% |
| CCCTACAATTTACTTCATGC+AGG | - | chr4_4:71025941-71025960 | Msa0700130:CDS | 40.0% | |
| GAGATACAATATTCCCACGA+GGG | - | chr4_4:71025963-71025982 | Msa0700130:CDS | 40.0% | |
| GGTAAATCTGGATTCACATG+AGG | - | chr4_4:71026090-71026109 | Msa0700130:CDS | 40.0% | |
| TAAGTGTGTGGTTTCTGCAT+TGG | - | chr4_4:71026156-71026175 | Msa0700130:CDS | 40.0% | |
| TGTGGATCTTCGTAGAAGAA+TGG | - | chr4_4:71026213-71026232 | Msa0700130:CDS | 40.0% | |
| CACTGTCTGATAAGTGTGTA+GGG | - | chr4_4:71026242-71026261 | Msa0700130:CDS | 40.0% | |
| AGTGTGTAGGGAACATAGTT+TGG | - | chr4_4:71026254-71026273 | Msa0700130:CDS | 40.0% | |
| ATACCAAGTCATGTAGTTCC+GGG | + | chr4_4:71026297-71026316 | None:intergenic | 40.0% | |
| !! | ACAAGTTACTACACCGGTTT+CGG | - | chr4_4:71026414-71026433 | Msa0700130:CDS | 40.0% |
| !! | CCGATGTATGAAGCTGATTT+TGG | - | chr4_4:71026487-71026506 | Msa0700130:CDS | 40.0% |
| GTACTAGTTGTCACCCATAT+CGG | + | chr4_4:71026523-71026542 | None:intergenic | 40.0% | |
| GGTTAGATTTGAACGAGAAG+TGG | - | chr4_4:71026630-71026649 | Msa0700130:CDS | 40.0% | |
| ! | GATTAAGAGAGGCATACTGA+AGG | + | chr4_4:71026660-71026679 | None:intergenic | 40.0% |
| TCCATATACTACCCCTTTGC+AGG | - | chr4_4:71025584-71025603 | Msa0700130:CDS | 45.0% | |
| TCTTTGAACCTGCCTGCAAA+GGG | + | chr4_4:71025599-71025618 | None:intergenic | 45.0% | |
| ATCTTTGAACCTGCCTGCAA+AGG | + | chr4_4:71025600-71025619 | None:intergenic | 45.0% | |
| TGGGCCAAATTGAATAGCGA+AGG | - | chr4_4:71025887-71025906 | Msa0700130:CDS | 45.0% | |
| GGAGATACAATATTCCCACG+AGG | - | chr4_4:71025962-71025981 | Msa0700130:CDS | 45.0% | |
| AATTTGGCAAACTCCCTCGT+GGG | + | chr4_4:71025979-71025998 | None:intergenic | 45.0% | |
| AAATTTGGCAAACTCCCTCG+TGG | + | chr4_4:71025980-71025999 | None:intergenic | 45.0% | |
| GTGACAACTTCTACACGTGT+GGG | + | chr4_4:71026124-71026143 | None:intergenic | 45.0% | |
| AGTGACAACTTCTACACGTG+TGG | + | chr4_4:71026125-71026144 | None:intergenic | 45.0% | |
| ACACACTTATCAGACAGTGG+AGG | + | chr4_4:71026241-71026260 | None:intergenic | 45.0% | |
| CCTACACACTTATCAGACAG+TGG | + | chr4_4:71026244-71026263 | None:intergenic | 45.0% | |
| CCACTGTCTGATAAGTGTGT+AGG | - | chr4_4:71026241-71026260 | Msa0700130:CDS | 45.0% | |
| !! | AGGGTTGTGTGAGTTTTGTG+AGG | - | chr4_4:71026330-71026349 | Msa0700130:CDS | 45.0% |
| TTGGATGGGGAAAACCGATA+TGG | - | chr4_4:71026506-71026525 | Msa0700130:CDS | 45.0% | |
| TGGATGGGGAAAACCGATAT+GGG | - | chr4_4:71026507-71026526 | Msa0700130:CDS | 45.0% | |
| TCCATATACTACCCCTTTGC+AGG | - | chr4_4:71025584-71025603 | Msa0700130:CDS | 45.0% | |
| TCTTTGAACCTGCCTGCAAA+GGG | + | chr4_4:71025599-71025618 | None:intergenic | 45.0% | |
| ATCTTTGAACCTGCCTGCAA+AGG | + | chr4_4:71025600-71025619 | None:intergenic | 45.0% | |
| TGGGCCAAATTGAATAGCGA+AGG | - | chr4_4:71025887-71025906 | Msa0700130:CDS | 45.0% | |
| GGAGATACAATATTCCCACG+AGG | - | chr4_4:71025962-71025981 | Msa0700130:CDS | 45.0% | |
| AATTTGGCAAACTCCCTCGT+GGG | + | chr4_4:71025979-71025998 | None:intergenic | 45.0% | |
| AAATTTGGCAAACTCCCTCG+TGG | + | chr4_4:71025980-71025999 | None:intergenic | 45.0% | |
| GTGACAACTTCTACACGTGT+GGG | + | chr4_4:71026124-71026143 | None:intergenic | 45.0% | |
| AGTGACAACTTCTACACGTG+TGG | + | chr4_4:71026125-71026144 | None:intergenic | 45.0% | |
| ACACACTTATCAGACAGTGG+AGG | + | chr4_4:71026241-71026260 | None:intergenic | 45.0% | |
| CCTACACACTTATCAGACAG+TGG | + | chr4_4:71026244-71026263 | None:intergenic | 45.0% | |
| CCACTGTCTGATAAGTGTGT+AGG | - | chr4_4:71026241-71026260 | Msa0700130:CDS | 45.0% | |
| !! | AGGGTTGTGTGAGTTTTGTG+AGG | - | chr4_4:71026330-71026349 | Msa0700130:CDS | 45.0% |
| TTGGATGGGGAAAACCGATA+TGG | - | chr4_4:71026506-71026525 | Msa0700130:CDS | 45.0% | |
| TGGATGGGGAAAACCGATAT+GGG | - | chr4_4:71026507-71026526 | Msa0700130:CDS | 45.0% | |
| !! | TTTCTAAGGTGGGGTGGAGT+TGG | + | chr4_4:71025431-71025450 | None:intergenic | 50.0% |
| !! | GGGAAATTTCTAAGGTGGGG+TGG | + | chr4_4:71025437-71025456 | None:intergenic | 50.0% |
| GCCTGCAAAGGGGTAGTATA+TGG | + | chr4_4:71025588-71025607 | None:intergenic | 50.0% | |
| TATACTACCCCTTTGCAGGC+AGG | - | chr4_4:71025588-71025607 | Msa0700130:CDS | 50.0% | |
| CTTTGAACCTGCCTGCAAAG+GGG | + | chr4_4:71025598-71025617 | None:intergenic | 50.0% | |
| CAAAACGACATCGCTTCGCA+TGG | - | chr4_4:71026189-71026208 | Msa0700130:CDS | 50.0% | |
| CAACCCGGAACTACATGACT+TGG | - | chr4_4:71026291-71026310 | Msa0700130:CDS | 50.0% | |
| !! | TTTCTAAGGTGGGGTGGAGT+TGG | + | chr4_4:71025431-71025450 | None:intergenic | 50.0% |
| !! | GGGAAATTTCTAAGGTGGGG+TGG | + | chr4_4:71025437-71025456 | None:intergenic | 50.0% |
| GCCTGCAAAGGGGTAGTATA+TGG | + | chr4_4:71025588-71025607 | None:intergenic | 50.0% | |
| TATACTACCCCTTTGCAGGC+AGG | - | chr4_4:71025588-71025607 | Msa0700130:CDS | 50.0% | |
| CTTTGAACCTGCCTGCAAAG+GGG | + | chr4_4:71025598-71025617 | None:intergenic | 50.0% | |
| CAAAACGACATCGCTTCGCA+TGG | - | chr4_4:71026189-71026208 | Msa0700130:CDS | 50.0% | |
| CAACCCGGAACTACATGACT+TGG | - | chr4_4:71026291-71026310 | Msa0700130:CDS | 50.0% | |
| !! | TGGGGTGGAGTTGGTGATGA+GGG | + | chr4_4:71025422-71025441 | None:intergenic | 55.0% |
| !! | TGGGGTGGAGTTGGTGATGA+GGG | + | chr4_4:71025422-71025441 | None:intergenic | 55.0% |
| !! | GTGGGGTGGAGTTGGTGATG+AGG | + | chr4_4:71025423-71025442 | None:intergenic | 60.0% |
| GACATCGCTTCGCATGGCTG+TGG | - | chr4_4:71026195-71026214 | Msa0700130:CDS | 60.0% | |
| !! | GTGGGGTGGAGTTGGTGATG+AGG | + | chr4_4:71025423-71025442 | None:intergenic | 60.0% |
| GACATCGCTTCGCATGGCTG+TGG | - | chr4_4:71026195-71026214 | Msa0700130:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 71025383 | 71026693 | 71025383 | ID=Msa0700130;Name=Msa0700130 |
| chr4_4 | mRNA | 71025383 | 71026693 | 71025383 | ID=Msa0700130-mRNA-1;Parent=Msa0700130;Name=Msa0700130-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|-1|0|1|-1|1|1|0|436 |
| chr4_4 | exon | 71025383 | 71026693 | 71025383 | ID=Msa0700130-mRNA-1:exon:21569;Parent=Msa0700130-mRNA-1 |
| chr4_4 | CDS | 71025383 | 71026693 | 71025383 | ID=Msa0700130-mRNA-1:cds;Parent=Msa0700130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
