Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700600 | XP_003629601.1 | 99.363 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 0.0 | 975 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700600 | sp|O23254|GLYC4_ARATH | 88.747 | 471 | 53 | 0 | 1 | 471 | 1 | 471 | 0.0 | 889 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700600 | G7LH57 | 99.363 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 0.0 | 975 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0700600 | Msa1408550 | 0.959443 | 1.901041e-117 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700600 | MtrunA17_Chr8g0378091 | 99.363 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 0.0 | 975 |
| Msa0700600 | MtrunA17_Chr3g0121851 | 93.418 | 471 | 31 | 0 | 1 | 471 | 1 | 471 | 0.0 | 928 |
| Msa0700600 | MtrunA17_Chr2g0277581 | 64.224 | 464 | 161 | 1 | 4 | 462 | 128 | 591 | 0.0 | 648 |
| Msa0700600 | MtrunA17_Chr3g0115291 | 63.991 | 461 | 158 | 2 | 7 | 462 | 118 | 575 | 0.0 | 633 |
| Msa0700600 | MtrunA17_Chr5g0428001 | 58.030 | 467 | 187 | 5 | 9 | 469 | 42 | 505 | 0.0 | 556 |
| Msa0700600 | MtrunA17_Chr5g0411661 | 58.155 | 466 | 188 | 4 | 9 | 469 | 53 | 516 | 0.0 | 554 |
| Msa0700600 | MtrunA17_Chr2g0285171 | 57.860 | 458 | 173 | 5 | 12 | 461 | 87 | 532 | 0.0 | 537 |
| Msa0700600 | MtrunA17_Chr7g0268951 | 63.068 | 176 | 64 | 1 | 37 | 212 | 1 | 175 | 1.72e-72 | 227 |
| Msa0700600 | MtrunA17_Chr1g0186271 | 29.532 | 342 | 176 | 7 | 127 | 462 | 10 | 292 | 1.12e-39 | 145 |
| Msa0700600 | MtrunA17_Chr7g0268941 | 39.735 | 151 | 85 | 2 | 318 | 462 | 16 | 166 | 2.40e-29 | 113 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700600 | AT4G13930.1 | 88.747 | 471 | 53 | 0 | 1 | 471 | 1 | 471 | 0.0 | 889 |
| Msa0700600 | AT4G13890.1 | 78.205 | 468 | 102 | 0 | 1 | 468 | 1 | 468 | 0.0 | 794 |
| Msa0700600 | AT4G13890.2 | 79.284 | 391 | 81 | 0 | 1 | 391 | 1 | 391 | 0.0 | 674 |
| Msa0700600 | AT1G36370.1 | 62.446 | 466 | 170 | 1 | 4 | 464 | 130 | 595 | 0.0 | 629 |
| Msa0700600 | AT1G22020.2 | 62.069 | 464 | 171 | 1 | 4 | 462 | 134 | 597 | 0.0 | 623 |
| Msa0700600 | AT1G22020.1 | 62.069 | 464 | 171 | 1 | 4 | 462 | 134 | 597 | 0.0 | 623 |
| Msa0700600 | AT4G32520.2 | 59.570 | 465 | 169 | 6 | 3 | 461 | 77 | 528 | 0.0 | 567 |
| Msa0700600 | AT4G32520.1 | 59.570 | 465 | 169 | 6 | 3 | 461 | 77 | 528 | 0.0 | 567 |
| Msa0700600 | AT4G37930.1 | 57.692 | 468 | 191 | 4 | 9 | 471 | 52 | 517 | 0.0 | 565 |
| Msa0700600 | AT5G26780.1 | 56.197 | 468 | 198 | 4 | 9 | 471 | 52 | 517 | 0.0 | 546 |
| Msa0700600 | AT5G26780.4 | 56.197 | 468 | 198 | 4 | 9 | 471 | 52 | 517 | 0.0 | 546 |
| Msa0700600 | AT5G26780.2 | 54.752 | 484 | 196 | 6 | 9 | 471 | 52 | 533 | 0.0 | 537 |
| Msa0700600 | AT5G26780.3 | 54.752 | 484 | 196 | 6 | 9 | 471 | 52 | 533 | 0.0 | 537 |
Find 178 sgRNAs with CRISPR-Local
Find 325 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCCCACATTTCCAATTA+TGG | 0.127617 | 4_4:+71725460 | Msa0700600:exon |
| ATTCTCAGGCTGGCCCTTCT+TGG | 0.198683 | 4_4:-71728129 | None:intergenic |
| ATTTGGTATGCCTGGTTTCC+TGG | 0.216412 | 4_4:+71729142 | Msa0700600:CDS |
| TGGCCCTTCTTGGGTGGTTT+AGG | 0.220073 | 4_4:-71728119 | None:intergenic |
| TAATCCTCATGATCGGATTA+TGG | 0.228344 | 4_4:+71725832 | Msa0700600:CDS |
| CTTAATCGTTGGTTAGTTTA+TGG | 0.235348 | 4_4:-71725320 | None:intergenic |
| CTTTGAGAGTTTGCCGTATA+AGG | 0.255272 | 4_4:+71725937 | Msa0700600:CDS |
| AGTTTATGGTAGTTGGTTAT+TGG | 0.278253 | 4_4:-71725306 | None:intergenic |
| TCGATTAGGTCGTGGATCTC+TGG | 0.281015 | 4_4:-71725527 | None:intergenic |
| TTCTCAGGCTGGCCCTTCTT+GGG | 0.286161 | 4_4:-71728128 | None:intergenic |
| TCGTTAACGGGATCCATAAT+TGG | 0.290094 | 4_4:-71725473 | None:intergenic |
| GAGAAGTTCTCTTCTTCATT+TGG | 0.300016 | 4_4:+71729125 | Msa0700600:CDS |
| ATTGGGATTATAAACGGTTT+AGG | 0.311040 | 4_4:+71726062 | Msa0700600:CDS |
| CATGATATCACACTCAAAAT+AGG | 0.316379 | 4_4:-71729261 | None:intergenic |
| TTGGGATTATAAACGGTTTA+GGG | 0.317920 | 4_4:+71726063 | Msa0700600:CDS |
| TAAATTTAACATGTAGTTGC+AGG | 0.324733 | 4_4:-71729462 | None:intergenic |
| AATCCTCATGATCGGATTAT+GGG | 0.338677 | 4_4:+71725833 | Msa0700600:CDS |
| CCTTGCTGTTGCCTTGAAAC+AGG | 0.346168 | 4_4:+71728235 | Msa0700600:CDS |
| TCATATCGATCCACAATCTT+GGG | 0.348360 | 4_4:+71725748 | Msa0700600:CDS |
| GAAAAGGACTTTGAGAAGAT+TGG | 0.349310 | 4_4:+71728978 | Msa0700600:CDS |
| TCTTCTTCATTTGGTATGCC+TGG | 0.356704 | 4_4:+71729134 | Msa0700600:CDS |
| TTCATATCGATCCACAATCT+TGG | 0.361702 | 4_4:+71725747 | Msa0700600:CDS |
| TAGTGGCCTTGTTGCTGCTC+AGG | 0.366141 | 4_4:+71726135 | Msa0700600:CDS |
| ACTCATGGTTACTACACTTC+CGG | 0.374719 | 4_4:+71725884 | Msa0700600:CDS |
| TTGTGGGATCTTCGCCCTCT+TGG | 0.377790 | 4_4:+71728380 | Msa0700600:CDS |
| TTCGGAGTATTTGTTTGTTA+AGG | 0.379837 | 4_4:-71725639 | None:intergenic |
| AGTAGATTTGTTGTTCTTTG+AGG | 0.380237 | 4_4:+71729498 | Msa0700600:three_prime_UTR |
| GTTGGTTAGTTTATGGTAGT+TGG | 0.381318 | 4_4:-71725313 | None:intergenic |
| CGATTAGGTCGTGGATCTCT+GGG | 0.381977 | 4_4:-71725526 | None:intergenic |
| TTGTTACCCCATTCGTTAAC+GGG | 0.382478 | 4_4:-71725485 | None:intergenic |
| ATGGGATTGGATCTTCCTTC+CGG | 0.399882 | 4_4:+71725851 | Msa0700600:CDS |
| TTCTAGAGGCTTGGTTGAAA+AGG | 0.401166 | 4_4:+71728962 | Msa0700600:CDS |
| TAGTGCTTACCCTAGGGATT+GGG | 0.404659 | 4_4:+71726045 | Msa0700600:CDS |
| ACAAGAGTTTGAGGGGTCCT+AGG | 0.411398 | 4_4:+71728069 | Msa0700600:CDS |
| CTAGGGATTGGGATTATAAA+CGG | 0.417514 | 4_4:+71726056 | Msa0700600:CDS |
| TTGAAACAGGCCATGTCACC+TGG | 0.428213 | 4_4:+71728248 | Msa0700600:CDS |
| TGCATTGGCCTTAACTTGCT+TGG | 0.435848 | 4_4:-71728285 | None:intergenic |
| GGCCATGTCACCTGGGTTCA+AGG | 0.436813 | 4_4:+71728256 | Msa0700600:CDS |
| GAAGGATTTCAACAAGGGCT+TGG | 0.437560 | 4_4:+71729064 | Msa0700600:CDS |
| AAATACTCCGAAGGCATGCC+GGG | 0.440063 | 4_4:+71725650 | Msa0700600:CDS |
| TTACCAACTCGTACTCCTCC+TGG | 0.440340 | 4_4:-71728586 | None:intergenic |
| TTTGTTACCCCATTCGTTAA+CGG | 0.443616 | 4_4:-71725486 | None:intergenic |
| GGCCATGACTTCTAGAGGCT+TGG | 0.443671 | 4_4:+71728953 | Msa0700600:CDS |
| TCATGATCGGATTATGGGAT+TGG | 0.447111 | 4_4:+71725838 | Msa0700600:CDS |
| AGGTGACATGGCCTGTTTCA+AGG | 0.449189 | 4_4:-71728246 | None:intergenic |
| GTAGTGCTTACCCTAGGGAT+TGG | 0.449816 | 4_4:+71726044 | Msa0700600:CDS |
| GATAGCAGTGCCTTGGCTCC+AGG | 0.451399 | 4_4:+71728568 | Msa0700600:CDS |
| CAACAGCAAGGGCACCAATC+TGG | 0.454079 | 4_4:-71728223 | None:intergenic |
| GGCATATGCCAAGCAAGTTA+AGG | 0.458758 | 4_4:+71728277 | Msa0700600:CDS |
| TATGGATCCCGTTAACGAAT+GGG | 0.460396 | 4_4:+71725478 | Msa0700600:exon |
| AAGAGTGGAATGAATGAGAA+TGG | 0.473078 | 4_4:-71725418 | None:intergenic |
| CTTCGCCCTCTTGGATTGAC+TGG | 0.475593 | 4_4:+71728389 | Msa0700600:CDS |
| CAACAACTCACAAGAGTTTG+AGG | 0.475648 | 4_4:+71728060 | Msa0700600:CDS |
| ACGGTTACCCGGCATGCCTT+CGG | 0.480831 | 4_4:-71725657 | None:intergenic |
| CACAACACTCAATTAACGCT+TGG | 0.482881 | 4_4:+71725350 | Msa0700600:five_prime_UTR |
| GTGGTGGTAGTGCTTACCCT+AGG | 0.483011 | 4_4:+71726038 | Msa0700600:CDS |
| CATACAAGCCACTTAGCAAA+AGG | 0.484796 | 4_4:-71729400 | None:intergenic |
| AAATCGTAAACTGCATTCTC+AGG | 0.485003 | 4_4:-71728143 | None:intergenic |
| CAAATACTCCGAAGGCATGC+CGG | 0.485477 | 4_4:+71725649 | Msa0700600:CDS |
| ATTTCCAATGGCAACTGCAT+TGG | 0.485964 | 4_4:-71728300 | None:intergenic |
| AGTTTGAGGGGTCCTAGGGC+TGG | 0.488241 | 4_4:+71728074 | Msa0700600:CDS |
| CGTAAACTGCATTCTCAGGC+TGG | 0.492457 | 4_4:-71728139 | None:intergenic |
| CTTCTGAAGGATTTCAACAA+GGG | 0.500755 | 4_4:+71729059 | Msa0700600:CDS |
| TTCGCCGGCGAGCCAGAGTA+AGG | 0.502439 | 4_4:-71725785 | None:intergenic |
| TGTGTCGGTTGTGTTTAAAA+AGG | 0.502519 | 4_4:-71725388 | None:intergenic |
| GTCGTCGAATTCACCTTATA+CGG | 0.506731 | 4_4:-71725950 | None:intergenic |
| GGGATCCATAATTGGAAATG+TGG | 0.508919 | 4_4:-71725465 | None:intergenic |
| AAGGCCAATGCAGTTGCCAT+TGG | 0.512235 | 4_4:+71728296 | Msa0700600:CDS |
| TCCGGCGGACATTTGACTCA+TGG | 0.513991 | 4_4:+71725869 | Msa0700600:CDS |
| TCAGGCTGGCCCTTCTTGGG+TGG | 0.515292 | 4_4:-71728125 | None:intergenic |
| GGGCTGGAATGATCTTCTAC+AGG | 0.516037 | 4_4:+71728090 | Msa0700600:CDS |
| GGGACCTAAACCACCCAAGA+AGG | 0.517255 | 4_4:+71728115 | Msa0700600:CDS |
| GTTAACGTTCAGCCTTACTC+TGG | 0.517277 | 4_4:+71725773 | Msa0700600:CDS |
| TGAGAACCATCTTGTGTTGT+GGG | 0.518139 | 4_4:+71728364 | Msa0700600:CDS |
| TGGAAATTACTTGATGAGCA+AGG | 0.520445 | 4_4:+71728316 | Msa0700600:CDS |
| CGTTTATAATCCCAATCCCT+AGG | 0.523617 | 4_4:-71726055 | None:intergenic |
| AGGCCTAGGTTGATTATCTG+TGG | 0.524395 | 4_4:+71726019 | Msa0700600:CDS |
| GGATTTCAACAAGGGCTTGG+TGG | 0.525840 | 4_4:+71729067 | Msa0700600:CDS |
| AGTGAGACGTTGGATTTGAG+AGG | 0.529073 | 4_4:-71729196 | None:intergenic |
| CAAGAGTTTGAGGGGTCCTA+GGG | 0.529217 | 4_4:+71728070 | Msa0700600:CDS |
| GTCGTGGATCTCTGGGTCGA+CGG | 0.531722 | 4_4:-71725519 | None:intergenic |
| GTGAGACGTTGGATTTGAGA+GGG | 0.534340 | 4_4:-71729195 | None:intergenic |
| GAAGAGCGCGTGAACGGCAA+AGG | 0.536667 | 4_4:-71725718 | None:intergenic |
| GGAAATTACTTGATGAGCAA+GGG | 0.542211 | 4_4:+71728317 | Msa0700600:CDS |
| TGAATGAATGAAAGAAAGAG+TGG | 0.543244 | 4_4:-71725433 | None:intergenic |
| CACAATGTCACAGTACTCAA+AGG | 0.544775 | 4_4:-71728033 | None:intergenic |
| ACAATGTCACAGTACTCAAA+GGG | 0.547706 | 4_4:-71728032 | None:intergenic |
| TGGTGGTAGTGCTTACCCTA+GGG | 0.548765 | 4_4:+71726039 | Msa0700600:CDS |
| AACAACTCACAAGAGTTTGA+GGG | 0.550530 | 4_4:+71728061 | Msa0700600:CDS |
| GTGTAAGCGGCAAAATTCGC+CGG | 0.550642 | 4_4:-71725800 | None:intergenic |
| TTGGCATATGCCTTGAACCC+AGG | 0.551473 | 4_4:-71728266 | None:intergenic |
| AAGCTTGAAGAGCGCGTGAA+CGG | 0.551498 | 4_4:-71725724 | None:intergenic |
| TATTGATTATGATCGGTTGG+AGG | 0.551586 | 4_4:+71725979 | Msa0700600:CDS |
| TAGAAGATCATTCCAGCCCT+AGG | 0.552646 | 4_4:-71728086 | None:intergenic |
| TGCCTTGAACCCAGGTGACA+TGG | 0.553241 | 4_4:-71728258 | None:intergenic |
| TCAAACTTTGAGTGAGACGT+TGG | 0.553745 | 4_4:-71729206 | None:intergenic |
| CGCCGAGATCTTCTTCCCAC+CGG | 0.554127 | 4_4:-71725903 | None:intergenic |
| ATTGTGAGGACCACCTTGAA+GGG | 0.554639 | 4_4:-71728198 | None:intergenic |
| ATTCGTTACCGCCGTAGTAA+CGG | 0.557823 | 4_4:-71725676 | None:intergenic |
| CATATCGATCCACAATCTTG+GGG | 0.560138 | 4_4:+71725749 | Msa0700600:CDS |
| TTATGGATCCCGTTAACGAA+TGG | 0.563507 | 4_4:+71725477 | Msa0700600:exon |
| GATGTTCTTTGCAGGAAACA+AGG | 0.566091 | 4_4:+71728489 | Msa0700600:intron |
| TGAGGACCACCTTGAAGGGA+AGG | 0.566539 | 4_4:-71728194 | None:intergenic |
| CAAGGGCTTGGTGGACAACA+AGG | 0.566901 | 4_4:+71729076 | Msa0700600:CDS |
| AACCAAGCCTCTAGAAGTCA+TGG | 0.567694 | 4_4:-71728955 | None:intergenic |
| GGTCCTCACAATCACCAGAT+TGG | 0.567733 | 4_4:+71728209 | Msa0700600:CDS |
| GATTGTGAGGACCACCTTGA+AGG | 0.568372 | 4_4:-71728199 | None:intergenic |
| TCGGTTGGAGGAGAAAGCGT+TGG | 0.568631 | 4_4:+71725991 | Msa0700600:CDS |
| GAGAGCTTCGATGACGGCGA+AGG | 0.570081 | 4_4:-71725609 | None:intergenic |
| CCGCCGTAGTAACGGTTACC+CGG | 0.570379 | 4_4:-71725668 | None:intergenic |
| ATCTCAGATACCAGGAAACC+AGG | 0.570656 | 4_4:-71729152 | None:intergenic |
| ACGTTAACTCCCCAAGATTG+TGG | 0.570906 | 4_4:-71725758 | None:intergenic |
| TCGTACTCCTCCTGGAGCCA+AGG | 0.577883 | 4_4:-71728578 | None:intergenic |
| TGTGGCCGTTGCTTAATCGT+TGG | 0.578249 | 4_4:-71725331 | None:intergenic |
| GCTCATCAAGTAATTTCCAA+TGG | 0.578871 | 4_4:-71728312 | None:intergenic |
| GGAGCATGGAAAACTTCTGA+AGG | 0.579867 | 4_4:+71729046 | Msa0700600:CDS |
| CTAGAGATCCAGAAGGAGCA+TGG | 0.581707 | 4_4:+71729032 | Msa0700600:CDS |
| CTGAGAACCATCTTGTGTTG+TGG | 0.583570 | 4_4:+71728363 | Msa0700600:CDS |
| ACTTCTGAAGGATTTCAACA+AGG | 0.584978 | 4_4:+71729058 | Msa0700600:CDS |
| AAGGGATACAGTCTTGTCAC+TGG | 0.587154 | 4_4:+71728335 | Msa0700600:CDS |
| TTCGCCGTCATCGAAGCTCT+CGG | 0.587338 | 4_4:+71725611 | Msa0700600:CDS |
| TGGAATGATCTTCTACAGGA+AGG | 0.588696 | 4_4:+71728094 | Msa0700600:CDS |
| TGAGTGTCACAGCACGGTGA+AGG | 0.589218 | 4_4:-71729007 | None:intergenic |
| GGATCCATAATTGGAAATGT+GGG | 0.597850 | 4_4:-71725464 | None:intergenic |
| ATTAAGCACGGCGGTGTAAG+CGG | 0.599880 | 4_4:-71725813 | None:intergenic |
| GAAGATCCCACAACACAAGA+TGG | 0.603113 | 4_4:-71728370 | None:intergenic |
| CTGTTTCAAGGCAACAGCAA+GGG | 0.603551 | 4_4:-71728234 | None:intergenic |
| CCTAGGTTGATTATCTGTGG+TGG | 0.604842 | 4_4:+71726022 | Msa0700600:CDS |
| AGTTCTGTTAACAGGTGCTC+CGG | 0.607108 | 4_4:+71728932 | Msa0700600:intron |
| TTCCGGTGGGAAGAAGATCT+CGG | 0.608842 | 4_4:+71725901 | Msa0700600:CDS |
| TATAAGGTGAATTCGACGAC+TGG | 0.610662 | 4_4:+71725953 | Msa0700600:CDS |
| GGAATGATCTTCTACAGGAA+GGG | 0.611076 | 4_4:+71728095 | Msa0700600:CDS |
| GGATACAGTCTTGTCACTGG+TGG | 0.612060 | 4_4:+71728338 | Msa0700600:CDS |
| GGACCTAAACCACCCAAGAA+GGG | 0.613785 | 4_4:+71728116 | Msa0700600:CDS |
| TGAGTCAAATGTCCGCCGGA+AGG | 0.615053 | 4_4:-71725866 | None:intergenic |
| GCTCCGGCCATGACTTCTAG+AGG | 0.616605 | 4_4:+71728948 | Msa0700600:CDS |
| CCGTGCTTAATCCTCATGAT+CGG | 0.621696 | 4_4:+71725825 | Msa0700600:CDS |
| TGTACTTCATCTCAGATACC+AGG | 0.622326 | 4_4:-71729160 | None:intergenic |
| GTTTATAATCCCAATCCCTA+GGG | 0.625521 | 4_4:-71726054 | None:intergenic |
| AGGGATGTTGCTGATAAGTG+TGG | 0.626741 | 4_4:+71726082 | Msa0700600:CDS |
| TGAAACAGGCCATGTCACCT+GGG | 0.627178 | 4_4:+71728249 | Msa0700600:CDS |
| GCACCAATCTGGTGATTGTG+AGG | 0.629254 | 4_4:-71728212 | None:intergenic |
| AAGCCTCTAGAAGTCATGGC+CGG | 0.629761 | 4_4:-71728951 | None:intergenic |
| CCTGTTTCAAGGCAACAGCA+AGG | 0.630010 | 4_4:-71728235 | None:intergenic |
| ACCATGAGTCAAATGTCCGC+CGG | 0.630185 | 4_4:-71725870 | None:intergenic |
| ACTGCCGAGAGCTTCGATGA+CGG | 0.631255 | 4_4:-71725615 | None:intergenic |
| CATGGTTACTACACTTCCGG+TGG | 0.632247 | 4_4:+71725887 | Msa0700600:CDS |
| TTTATACCTGAGCAGCAACA+AGG | 0.632475 | 4_4:-71726141 | None:intergenic |
| CGGAATCGAACTCATCGCAT+CGG | 0.632638 | 4_4:+71725574 | Msa0700600:CDS |
| GGTATCTGAGATGAAGTACA+AGG | 0.632761 | 4_4:+71729163 | Msa0700600:CDS |
| GCTCCAGGAGGAGTACGAGT+TGG | 0.634787 | 4_4:+71728583 | Msa0700600:CDS |
| CTCACTCAAAGTTTGAGACA+AGG | 0.636420 | 4_4:+71729213 | Msa0700600:three_prime_UTR |
| CCACCACAGATAATCAACCT+AGG | 0.638606 | 4_4:-71726022 | None:intergenic |
| ATGCCGGGTAACCGTTACTA+CGG | 0.640626 | 4_4:+71725665 | Msa0700600:CDS |
| TCAGCCTTACTCTGGCTCGC+CGG | 0.640731 | 4_4:+71725781 | Msa0700600:CDS |
| CAAGCGTTAATTGAGTGTTG+TGG | 0.640834 | 4_4:-71725349 | None:intergenic |
| CTTTACCAGTCAATCCAAGA+GGG | 0.641081 | 4_4:-71728394 | None:intergenic |
| TTAACAAACAAATACTCCGA+AGG | 0.642664 | 4_4:+71725641 | Msa0700600:CDS |
| ATGGATCCCGTTAACGAATG+GGG | 0.646563 | 4_4:+71725479 | Msa0700600:CDS |
| AATCCCATAATCCGATCATG+AGG | 0.648526 | 4_4:-71725836 | None:intergenic |
| GGATTGGATCTTCCTTCCGG+CGG | 0.650252 | 4_4:+71725854 | Msa0700600:CDS |
| TCTGGGTCGACGGTTACGAG+TGG | 0.653406 | 4_4:-71725509 | None:intergenic |
| GAGAATGGAAATGTGTGTGT+CGG | 0.658668 | 4_4:-71725403 | None:intergenic |
| ATGCGATGAGTTCGATTCCG+CGG | 0.660307 | 4_4:-71725571 | None:intergenic |
| GAGGACCACCTTGAAGGGAA+GGG | 0.667267 | 4_4:-71728193 | None:intergenic |
| TGTTGACTGTGATGTTACAG+AGG | 0.668976 | 4_4:-71728528 | None:intergenic |
| ACTAACCAACGATTAAGCAA+CGG | 0.671693 | 4_4:+71725326 | Msa0700600:five_prime_UTR |
| ACTCAAAGTTTGAGACAAGG+TGG | 0.675922 | 4_4:+71729216 | Msa0700600:three_prime_UTR |
| ACAACTCACAAGAGTTTGAG+GGG | 0.676117 | 4_4:+71728062 | Msa0700600:CDS |
| ATGGTTACTACACTTCCGGT+GGG | 0.684287 | 4_4:+71725888 | Msa0700600:CDS |
| CCGATCATGAGGATTAAGCA+CGG | 0.689739 | 4_4:-71725825 | None:intergenic |
| GTTCTTTGCAGGAAACAAGG+TGG | 0.691862 | 4_4:+71728492 | Msa0700600:intron |
| AGCAGTGCCTTGGCTCCAGG+AGG | 0.693630 | 4_4:+71728571 | Msa0700600:CDS |
| CCTTTACCAGTCAATCCAAG+AGG | 0.696201 | 4_4:-71728395 | None:intergenic |
| CTAGTGTGAGTGTCACAGCA+CGG | 0.697489 | 4_4:-71729013 | None:intergenic |
| CCGGGTAACCGTTACTACGG+CGG | 0.702920 | 4_4:+71725668 | Msa0700600:CDS |
| ACTCACACTAGAGATCCAGA+AGG | 0.729137 | 4_4:+71729025 | Msa0700600:CDS |
| ATCATGAGGATTAAGCACGG+CGG | 0.835014 | 4_4:-71725822 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTAATTTAAGTTTACAT+AGG | - | chr4_4:71726602-71726621 | None:intergenic | 10.0% |
| !! | TATTAAGAAAAAATATGATT+AGG | - | chr4_4:71729348-71729367 | None:intergenic | 10.0% |
| !! | TATGAATCTAATTAACATAA+CGG | - | chr4_4:71726197-71726216 | None:intergenic | 15.0% |
| !! | GTTTGTTTACTTTAATTAAA+GGG | - | chr4_4:71726297-71726316 | None:intergenic | 15.0% |
| !! | AATAAGATCCATTAAATTAA+GGG | - | chr4_4:71727167-71727186 | None:intergenic | 15.0% |
| !! | AAATAAGATCCATTAAATTA+AGG | - | chr4_4:71727168-71727187 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTTTTGTGG+TGG | + | chr4_4:71727448-71727467 | Msa0700600:intron | 15.0% |
| !! | TAAATATTATTGATGTTCTT+GGG | - | chr4_4:71727602-71727621 | None:intergenic | 15.0% |
| !! | AAGAACATCAATAATATTTA+GGG | + | chr4_4:71727602-71727621 | Msa0700600:intron | 15.0% |
| !! | TTGAGTAAAATATAAAACAA+AGG | - | chr4_4:71728899-71728918 | None:intergenic | 15.0% |
| !!! | TTTGTTTTATATTTTACTCA+AGG | + | chr4_4:71728898-71728917 | Msa0700600:intron | 15.0% |
| !!! | CAAAAAAAGAAATTAAGTTT+TGG | + | chr4_4:71729298-71729317 | Msa0700600:three_prime_UTR | 15.0% |
| !!! | CTTTAATTAAAGGGTATATT+AGG | - | chr4_4:71726288-71726307 | None:intergenic | 20.0% |
| !! | CGTTTGTTTACTTTAATTAA+AGG | - | chr4_4:71726298-71726317 | None:intergenic | 20.0% |
| !! | ATTACTTAGTTCATTTAAAC+TGG | + | chr4_4:71726519-71726538 | Msa0700600:intron | 20.0% |
| !! | TTACTTAGTTCATTTAAACT+GGG | + | chr4_4:71726520-71726539 | Msa0700600:intron | 20.0% |
| !!! | TTTAGAATGAGAATGAAATA+AGG | + | chr4_4:71726893-71726912 | Msa0700600:intron | 20.0% |
| !! | TTAGAATGAGAATGAAATAA+GGG | + | chr4_4:71726894-71726913 | Msa0700600:intron | 20.0% |
| !! | CTAAATATTATTGATGTTCT+TGG | - | chr4_4:71727603-71727622 | None:intergenic | 20.0% |
| !! | CAAGAACATCAATAATATTT+AGG | + | chr4_4:71727601-71727620 | Msa0700600:intron | 20.0% |
| !! | TAATGTAAGGATTTATTAGA+AGG | + | chr4_4:71727893-71727912 | Msa0700600:intron | 20.0% |
| !!! | ATAATATGACTTGTTTTGTT+TGG | + | chr4_4:71727956-71727975 | Msa0700600:intron | 20.0% |
| !!! | TATGGACTTAACTTTATTTT+CGG | + | chr4_4:71728618-71728637 | Msa0700600:intron | 20.0% |
| !! | ACAAATCAAATAATACTACT+TGG | - | chr4_4:71728754-71728773 | None:intergenic | 20.0% |
| !!! | GCATATTTACAATTTTTACA+TGG | - | chr4_4:71728786-71728805 | None:intergenic | 20.0% |
| !! | TATACAGTAACAAGATTAAA+AGG | - | chr4_4:71728849-71728868 | None:intergenic | 20.0% |
| !!! | CTGGTTTTATTGATTATGAT+CGG | + | chr4_4:71725972-71725991 | Msa0700600:CDS | 25.0% |
| !!! | TTTTATTGATTATGATCGGT+TGG | + | chr4_4:71725976-71725995 | Msa0700600:CDS | 25.0% |
| !!! | AAGGGTATATTAGGAATTTT+GGG | - | chr4_4:71726279-71726298 | None:intergenic | 25.0% |
| !!! | AAAGGGTATATTAGGAATTT+TGG | - | chr4_4:71726280-71726299 | None:intergenic | 25.0% |
| !! | TGATTTAAGTTTACGTAGAA+GGG | - | chr4_4:71726631-71726650 | None:intergenic | 25.0% |
| !! | TTGATTTAAGTTTACGTAGA+AGG | - | chr4_4:71726632-71726651 | None:intergenic | 25.0% |
| !!! | ATTTAATTGGCGATTTTAGT+GGG | + | chr4_4:71726822-71726841 | Msa0700600:intron | 25.0% |
| !!! | TTTTAGAAATCTACATGAAG+AGG | + | chr4_4:71726918-71726937 | Msa0700600:intron | 25.0% |
| ! | TTTAGAAATCTACATGAAGA+GGG | + | chr4_4:71726919-71726938 | Msa0700600:intron | 25.0% |
| ! | ATTAAATTAAGGGAAATGTC+GGG | - | chr4_4:71727157-71727176 | None:intergenic | 25.0% |
| ! | CATTAAATTAAGGGAAATGT+CGG | - | chr4_4:71727158-71727177 | None:intergenic | 25.0% |
| !! | ATCGATAAACTTGTCTTTTA+AGG | + | chr4_4:71727410-71727429 | Msa0700600:intron | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | - | chr4_4:71727741-71727760 | None:intergenic | 25.0% |
| ! | TACTCCTTATAGTTATACTA+TGG | - | chr4_4:71727830-71727849 | None:intergenic | 25.0% |
| ! | AATAAATCCTTACATTACCA+AGG | - | chr4_4:71727890-71727909 | None:intergenic | 25.0% |
| ! | TTTATATTGCGTACTATTTC+TGG | + | chr4_4:71728447-71728466 | Msa0700600:intron | 25.0% |
| !! | CAAGTTGTTGTAAATTTTGT+TGG | + | chr4_4:71728671-71728690 | Msa0700600:intron | 25.0% |
| ! | TAAATTTAACATGTAGTTGC+AGG | - | chr4_4:71729465-71729484 | None:intergenic | 25.0% |
| AGTTTATGGTAGTTGGTTAT+TGG | - | chr4_4:71725309-71725328 | None:intergenic | 30.0% | |
| !! | CTTAATCGTTGGTTAGTTTA+TGG | - | chr4_4:71725323-71725342 | None:intergenic | 30.0% |
| TGTGTTTAAAAAGGAAGAGA+TGG | - | chr4_4:71725382-71725401 | None:intergenic | 30.0% | |
| TGAATGAATGAAAGAAAGAG+TGG | - | chr4_4:71725436-71725455 | None:intergenic | 30.0% | |
| !!! | GACGTTTTTCTTTTTCGATT+AGG | - | chr4_4:71725544-71725563 | None:intergenic | 30.0% |
| ! | TTCGGAGTATTTGTTTGTTA+AGG | - | chr4_4:71725642-71725661 | None:intergenic | 30.0% |
| TTAACAAACAAATACTCCGA+AGG | + | chr4_4:71725641-71725660 | Msa0700600:CDS | 30.0% | |
| ATTGGGATTATAAACGGTTT+AGG | + | chr4_4:71726062-71726081 | Msa0700600:CDS | 30.0% | |
| TTGGGATTATAAACGGTTTA+GGG | + | chr4_4:71726063-71726082 | Msa0700600:CDS | 30.0% | |
| ! | AGGGTATATTAGGAATTTTG+GGG | - | chr4_4:71726278-71726297 | None:intergenic | 30.0% |
| ACAACAAGAATAAACAACCA+TGG | + | chr4_4:71726685-71726704 | Msa0700600:intron | 30.0% | |
| ! | CGATGTTGTTAATTTTACCA+TGG | - | chr4_4:71726705-71726724 | None:intergenic | 30.0% |
| !! | GGAAGAGATGTTGATTTAAT+TGG | + | chr4_4:71726809-71726828 | Msa0700600:intron | 30.0% |
| ! | GATTTAATTGGCGATTTTAG+TGG | + | chr4_4:71726821-71726840 | Msa0700600:intron | 30.0% |
| TGGGTGTAACTAGAATTATA+TGG | + | chr4_4:71726977-71726996 | Msa0700600:intron | 30.0% | |
| GGGTGTAACTAGAATTATAT+GGG | + | chr4_4:71726978-71726997 | Msa0700600:intron | 30.0% | |
| GGTGTAACTAGAATTATATG+GGG | + | chr4_4:71726979-71726998 | Msa0700600:intron | 30.0% | |
| TTAAATTAAGGGAAATGTCG+GGG | - | chr4_4:71727156-71727175 | None:intergenic | 30.0% | |
| CGACATTTCCCTTAATTTAA+TGG | + | chr4_4:71727156-71727175 | Msa0700600:intron | 30.0% | |
| TTCACTGTAAACAAACTATG+AGG | - | chr4_4:71727286-71727305 | None:intergenic | 30.0% | |
| ! | TTGTTGTTATCTATTCCATC+TGG | + | chr4_4:71727340-71727359 | Msa0700600:intron | 30.0% |
| !!! | TTTTTTTTTTTTGTGGTGGC+CGG | + | chr4_4:71727452-71727471 | Msa0700600:intron | 30.0% |
| TTTATCATAGCCCAGTTTAT+AGG | - | chr4_4:71727554-71727573 | None:intergenic | 30.0% | |
| CTATGATAAACATTGATGCT+AGG | + | chr4_4:71727564-71727583 | Msa0700600:intron | 30.0% | |
| ! | TTATTGATGTTCTTGGGTTT+TGG | - | chr4_4:71727596-71727615 | None:intergenic | 30.0% |
| AAAAATAAGCCAATCCAAAC+GGG | - | chr4_4:71727628-71727647 | None:intergenic | 30.0% | |
| CAAAAATAAGCCAATCCAAA+CGG | - | chr4_4:71727629-71727648 | None:intergenic | 30.0% | |
| TAAGTTCTCACTAACGAAAA+TGG | + | chr4_4:71727685-71727704 | Msa0700600:intron | 30.0% | |
| CAAAAATTAGCCAATCCAAA+CGG | + | chr4_4:71727803-71727822 | Msa0700600:intron | 30.0% | |
| AAAAATTAGCCAATCCAAAC+GGG | + | chr4_4:71727804-71727823 | Msa0700600:intron | 30.0% | |
| !!! | TTGATTATTTTTAGCCACCT+TGG | + | chr4_4:71727870-71727889 | Msa0700600:intron | 30.0% |
| ! | TTGTCTCAAAGCTTTTCTTA+CGG | + | chr4_4:71727930-71727949 | Msa0700600:intron | 30.0% |
| !! | TAGTTATTTGTTGTGTGTAC+AGG | + | chr4_4:71727998-71728017 | Msa0700600:intron | 30.0% |
| ! | AACCAGGCAAGATAAATTTT+AGG | - | chr4_4:71728429-71728448 | None:intergenic | 30.0% |
| AATAGTACGCAATATAAACC+AGG | - | chr4_4:71728445-71728464 | None:intergenic | 30.0% | |
| !!! | GTCAACAAAAATGCTGTTTT+TGG | + | chr4_4:71728544-71728563 | Msa0700600:CDS | 30.0% |
| !! | AGTTGGTAAGAAACTTTGTA+TGG | + | chr4_4:71728600-71728619 | Msa0700600:intron | 30.0% |
| ! | TTATTTTCGGAGTCTAAACT+TGG | + | chr4_4:71728631-71728650 | Msa0700600:intron | 30.0% |
| ! | TATTTTCGGAGTCTAAACTT+GGG | + | chr4_4:71728632-71728651 | Msa0700600:intron | 30.0% |
| GTTGGAAATCAATTTGATTG+AGG | + | chr4_4:71728689-71728708 | Msa0700600:intron | 30.0% | |
| CTACTTGGTAAAGAAATGAA+AGG | - | chr4_4:71728739-71728758 | None:intergenic | 30.0% | |
| CATGATATCACACTCAAAAT+AGG | - | chr4_4:71729264-71729283 | None:intergenic | 30.0% | |
| !! | TTTTGAGTGTGATATCATGA+TGG | + | chr4_4:71729265-71729284 | Msa0700600:three_prime_UTR | 30.0% |
| !! | GTTATTTTCCTTTTGCTAAG+TGG | + | chr4_4:71729392-71729411 | Msa0700600:three_prime_UTR | 30.0% |
| !! | GTTGGTTAGTTTATGGTAGT+TGG | - | chr4_4:71725316-71725335 | None:intergenic | 35.0% |
| ACTAACCAACGATTAAGCAA+CGG | + | chr4_4:71725326-71725345 | Msa0700600:five_prime_UTR | 35.0% | |
| !! | TGTGTCGGTTGTGTTTAAAA+AGG | - | chr4_4:71725391-71725410 | None:intergenic | 35.0% |
| AAGAGTGGAATGAATGAGAA+TGG | - | chr4_4:71725421-71725440 | None:intergenic | 35.0% | |
| CATTCCCACATTTCCAATTA+TGG | + | chr4_4:71725460-71725479 | Msa0700600:exon | 35.0% | |
| GGATCCATAATTGGAAATGT+GGG | - | chr4_4:71725467-71725486 | None:intergenic | 35.0% | |
| TTTGTTACCCCATTCGTTAA+CGG | - | chr4_4:71725489-71725508 | None:intergenic | 35.0% | |
| !!! | TTTCTTTTTCGATTAGGTCG+TGG | - | chr4_4:71725538-71725557 | None:intergenic | 35.0% |
| TTCATATCGATCCACAATCT+TGG | + | chr4_4:71725747-71725766 | Msa0700600:CDS | 35.0% | |
| TCATATCGATCCACAATCTT+GGG | + | chr4_4:71725748-71725767 | Msa0700600:CDS | 35.0% | |
| TAATCCTCATGATCGGATTA+TGG | + | chr4_4:71725832-71725851 | Msa0700600:CDS | 35.0% | |
| AATCCTCATGATCGGATTAT+GGG | + | chr4_4:71725833-71725852 | Msa0700600:CDS | 35.0% | |
| ! | TATTGATTATGATCGGTTGG+AGG | + | chr4_4:71725979-71725998 | Msa0700600:CDS | 35.0% |
| GTTTATAATCCCAATCCCTA+GGG | - | chr4_4:71726057-71726076 | None:intergenic | 35.0% | |
| CTAGGGATTGGGATTATAAA+CGG | + | chr4_4:71726056-71726075 | Msa0700600:CDS | 35.0% | |
| ! | TGCTCTTTTGCTTTGTGATA+TGG | + | chr4_4:71726105-71726124 | Msa0700600:CDS | 35.0% |
| ! | TGTGATATGGCTCATTTTAG+TGG | + | chr4_4:71726118-71726137 | Msa0700600:CDS | 35.0% |
| GGTGTAACTTGGATTATTTG+GGG | - | chr4_4:71726257-71726276 | None:intergenic | 35.0% | |
| GGGTGTAACTTGGATTATTT+GGG | - | chr4_4:71726258-71726277 | None:intergenic | 35.0% | |
| ATGAATCGAGTACGTATCAA+TGG | + | chr4_4:71726788-71726807 | Msa0700600:intron | 35.0% | |
| TAAATTAAGGGAAATGTCGG+GGG | - | chr4_4:71727155-71727174 | None:intergenic | 35.0% | |
| TTCTTGTTCCGTTGAATTAG+AGG | + | chr4_4:71727245-71727264 | Msa0700600:intron | 35.0% | |
| TCTTGTTCCGTTGAATTAGA+GGG | + | chr4_4:71727246-71727265 | Msa0700600:intron | 35.0% | |
| !!! | TTTTTTTTTTTGTGGTGGCC+GGG | + | chr4_4:71727453-71727472 | Msa0700600:intron | 35.0% |
| TAAAGCCCATTCATTTGTCT+GGG | - | chr4_4:71727487-71727506 | None:intergenic | 35.0% | |
| ATAAAGCCCATTCATTTGTC+TGG | - | chr4_4:71727488-71727507 | None:intergenic | 35.0% | |
| ACAATGCCTTACCTATAAAC+TGG | + | chr4_4:71727540-71727559 | Msa0700600:intron | 35.0% | |
| CAATGCCTTACCTATAAACT+GGG | + | chr4_4:71727541-71727560 | Msa0700600:intron | 35.0% | |
| ! | AATAATATTTAGGGCCCGTT+TGG | + | chr4_4:71727611-71727630 | Msa0700600:intron | 35.0% |
| AAATCCTTACATTACCAAGG+TGG | - | chr4_4:71727887-71727906 | None:intergenic | 35.0% | |
| ACAATGTCACAGTACTCAAA+GGG | - | chr4_4:71728035-71728054 | None:intergenic | 35.0% | |
| AACAACTCACAAGAGTTTGA+GGG | + | chr4_4:71728061-71728080 | Msa0700600:CDS | 35.0% | |
| AAATCGTAAACTGCATTCTC+AGG | - | chr4_4:71728146-71728165 | None:intergenic | 35.0% | |
| ! | GAATGCAGTTTACGATTTTG+AGG | + | chr4_4:71728148-71728167 | Msa0700600:CDS | 35.0% |
| GCTCATCAAGTAATTTCCAA+TGG | - | chr4_4:71728315-71728334 | None:intergenic | 35.0% | |
| TGGAAATTACTTGATGAGCA+AGG | + | chr4_4:71728316-71728335 | Msa0700600:CDS | 35.0% | |
| GGAAATTACTTGATGAGCAA+GGG | + | chr4_4:71728317-71728336 | Msa0700600:CDS | 35.0% | |
| !! | GGCAAGATAAATTTTAGGTG+AGG | - | chr4_4:71728424-71728443 | None:intergenic | 35.0% |
| CACCTAAAATTTATCTTGCC+TGG | + | chr4_4:71728424-71728443 | Msa0700600:intron | 35.0% | |
| ! | TTTCTGGAAACTTAATCTCG+CGG | + | chr4_4:71728463-71728482 | Msa0700600:intron | 35.0% |
| ! | GAAAAGGACTTTGAGAAGAT+TGG | + | chr4_4:71728978-71728997 | Msa0700600:CDS | 35.0% |
| ! | ACTTCTGAAGGATTTCAACA+AGG | + | chr4_4:71729058-71729077 | Msa0700600:CDS | 35.0% |
| ! | CTTCTGAAGGATTTCAACAA+GGG | + | chr4_4:71729059-71729078 | Msa0700600:CDS | 35.0% |
| GAGAAGTTCTCTTCTTCATT+TGG | + | chr4_4:71729125-71729144 | Msa0700600:CDS | 35.0% | |
| ! | CAAGCGTTAATTGAGTGTTG+TGG | - | chr4_4:71725352-71725371 | None:intergenic | 40.0% |
| CACAACACTCAATTAACGCT+TGG | + | chr4_4:71725350-71725369 | Msa0700600:five_prime_UTR | 40.0% | |
| GAGAATGGAAATGTGTGTGT+CGG | - | chr4_4:71725406-71725425 | None:intergenic | 40.0% | |
| GGGATCCATAATTGGAAATG+TGG | - | chr4_4:71725468-71725487 | None:intergenic | 40.0% | |
| TCGTTAACGGGATCCATAAT+TGG | - | chr4_4:71725476-71725495 | None:intergenic | 40.0% | |
| TTATGGATCCCGTTAACGAA+TGG | + | chr4_4:71725477-71725496 | Msa0700600:exon | 40.0% | |
| TATGGATCCCGTTAACGAAT+GGG | + | chr4_4:71725478-71725497 | Msa0700600:exon | 40.0% | |
| TTGTTACCCCATTCGTTAAC+GGG | - | chr4_4:71725488-71725507 | None:intergenic | 40.0% | |
| ! | AACGGCAAAGGTTTTCGATT+TGG | - | chr4_4:71725709-71725728 | None:intergenic | 40.0% |
| CATATCGATCCACAATCTTG+GGG | + | chr4_4:71725749-71725768 | Msa0700600:CDS | 40.0% | |
| AATCCCATAATCCGATCATG+AGG | - | chr4_4:71725839-71725858 | None:intergenic | 40.0% | |
| TCATGATCGGATTATGGGAT+TGG | + | chr4_4:71725838-71725857 | Msa0700600:CDS | 40.0% | |
| ACTCATGGTTACTACACTTC+CGG | + | chr4_4:71725884-71725903 | Msa0700600:CDS | 40.0% | |
| ! | CTTTGAGAGTTTGCCGTATA+AGG | + | chr4_4:71725937-71725956 | Msa0700600:CDS | 40.0% |
| GTCGTCGAATTCACCTTATA+CGG | - | chr4_4:71725953-71725972 | None:intergenic | 40.0% | |
| TATAAGGTGAATTCGACGAC+TGG | + | chr4_4:71725953-71725972 | Msa0700600:CDS | 40.0% | |
| !!! | AGGAGAAAGCGTTGGATTTT+AGG | + | chr4_4:71725999-71726018 | Msa0700600:CDS | 40.0% |
| CGTTTATAATCCCAATCCCT+AGG | - | chr4_4:71726058-71726077 | None:intergenic | 40.0% | |
| TTTATACCTGAGCAGCAACA+AGG | - | chr4_4:71726144-71726163 | None:intergenic | 40.0% | |
| ! | ACTTGGATTATTTGGGGTGT+GGG | - | chr4_4:71726251-71726270 | None:intergenic | 40.0% |
| ! | AACTTGGATTATTTGGGGTG+TGG | - | chr4_4:71726252-71726271 | None:intergenic | 40.0% |
| GGGGTGTAACTTGGATTATT+TGG | - | chr4_4:71726259-71726278 | None:intergenic | 40.0% | |
| !!! | AGGAATTTTGGGGTGTAACT+TGG | - | chr4_4:71726268-71726287 | None:intergenic | 40.0% |
| !! | GGGTATTGATTGCATATCCA+TGG | + | chr4_4:71726842-71726861 | Msa0700600:intron | 40.0% |
| ! | TGCATATCCATGGTGTTTTG+TGG | + | chr4_4:71726852-71726871 | Msa0700600:intron | 40.0% |
| ! | GCATATCCATGGTGTTTTGT+GGG | + | chr4_4:71726853-71726872 | Msa0700600:intron | 40.0% |
| ! | TTTTCACCCACAAAACACCA+TGG | - | chr4_4:71726862-71726881 | None:intergenic | 40.0% |
| ! | TGGTGTTTTGTGGGTGAAAA+AGG | + | chr4_4:71726862-71726881 | Msa0700600:intron | 40.0% |
| ! | GGTGTTTTGTGGGTGAAAAA+GGG | + | chr4_4:71726863-71726882 | Msa0700600:intron | 40.0% |
| ! | GTGTTTTGTGGGTGAAAAAG+GGG | + | chr4_4:71726864-71726883 | Msa0700600:intron | 40.0% |
| ! | CTACATGAAGAGGGCAATTT+TGG | + | chr4_4:71726928-71726947 | Msa0700600:intron | 40.0% |
| CTTGTTCCGTTGAATTAGAG+GGG | + | chr4_4:71727247-71727266 | Msa0700600:intron | 40.0% | |
| CATACTCCCCTCTAATTCAA+CGG | - | chr4_4:71727256-71727275 | None:intergenic | 40.0% | |
| CCTTTAACAACAGATCCAGA+TGG | - | chr4_4:71727358-71727377 | None:intergenic | 40.0% | |
| CCATCTGGATCTGTTGTTAA+AGG | + | chr4_4:71727355-71727374 | Msa0700600:intron | 40.0% | |
| !!! | TTTTTTTTTTGTGGTGGCCG+GGG | + | chr4_4:71727454-71727473 | Msa0700600:intron | 40.0% |
| AAAGCCCATTCATTTGTCTG+GGG | - | chr4_4:71727486-71727505 | None:intergenic | 40.0% | |
| CATAGCCCAGTTTATAGGTA+AGG | - | chr4_4:71727549-71727568 | None:intergenic | 40.0% | |
| TAGTTATACTATGGCCCGTT+TGG | - | chr4_4:71727821-71727840 | None:intergenic | 40.0% | |
| CGGGCCATAGTATAACTATA+AGG | + | chr4_4:71727823-71727842 | Msa0700600:intron | 40.0% | |
| !! | TTAGCCACCTTGGTAATGTA+AGG | + | chr4_4:71727880-71727899 | Msa0700600:intron | 40.0% |
| CACAATGTCACAGTACTCAA+AGG | - | chr4_4:71728036-71728055 | None:intergenic | 40.0% | |
| CAACAACTCACAAGAGTTTG+AGG | + | chr4_4:71728060-71728079 | Msa0700600:CDS | 40.0% | |
| ACAACTCACAAGAGTTTGAG+GGG | + | chr4_4:71728062-71728081 | Msa0700600:CDS | 40.0% | |
| TGGAATGATCTTCTACAGGA+AGG | + | chr4_4:71728094-71728113 | Msa0700600:CDS | 40.0% | |
| GGAATGATCTTCTACAGGAA+GGG | + | chr4_4:71728095-71728114 | Msa0700600:CDS | 40.0% | |
| ATTTCCAATGGCAACTGCAT+TGG | - | chr4_4:71728303-71728322 | None:intergenic | 40.0% | |
| TGAGAACCATCTTGTGTTGT+GGG | + | chr4_4:71728364-71728383 | Msa0700600:CDS | 40.0% | |
| CTTTACCAGTCAATCCAAGA+GGG | - | chr4_4:71728397-71728416 | None:intergenic | 40.0% | |
| GATGTTCTTTGCAGGAAACA+AGG | + | chr4_4:71728489-71728508 | Msa0700600:intron | 40.0% | |
| ! | TGTTGACTGTGATGTTACAG+AGG | - | chr4_4:71728531-71728550 | None:intergenic | 40.0% |
| ! | TTTTACTCAAGGTAGCTGAC+TGG | + | chr4_4:71728909-71728928 | Msa0700600:intron | 40.0% |
| ! | TTCTAGAGGCTTGGTTGAAA+AGG | + | chr4_4:71728962-71728981 | Msa0700600:CDS | 40.0% |
| TCTTCTTCATTTGGTATGCC+TGG | + | chr4_4:71729134-71729153 | Msa0700600:CDS | 40.0% | |
| TGTACTTCATCTCAGATACC+AGG | - | chr4_4:71729163-71729182 | None:intergenic | 40.0% | |
| ! | GGTATCTGAGATGAAGTACA+AGG | + | chr4_4:71729163-71729182 | Msa0700600:CDS | 40.0% |
| TCAAACTTTGAGTGAGACGT+TGG | - | chr4_4:71729209-71729228 | None:intergenic | 40.0% | |
| ! | CTCACTCAAAGTTTGAGACA+AGG | + | chr4_4:71729213-71729232 | Msa0700600:three_prime_UTR | 40.0% |
| ! | ACTCAAAGTTTGAGACAAGG+TGG | + | chr4_4:71729216-71729235 | Msa0700600:three_prime_UTR | 40.0% |
| CATACAAGCCACTTAGCAAA+AGG | - | chr4_4:71729403-71729422 | None:intergenic | 40.0% | |
| ATGGATCCCGTTAACGAATG+GGG | + | chr4_4:71725479-71725498 | Msa0700600:CDS | 45.0% | |
| ATTCGTTACCGCCGTAGTAA+CGG | - | chr4_4:71725679-71725698 | None:intergenic | 45.0% | |
| ACGTTAACTCCCCAAGATTG+TGG | - | chr4_4:71725761-71725780 | None:intergenic | 45.0% | |
| GTTAACGTTCAGCCTTACTC+TGG | + | chr4_4:71725773-71725792 | Msa0700600:CDS | 45.0% | |
| ATCATGAGGATTAAGCACGG+CGG | - | chr4_4:71725825-71725844 | None:intergenic | 45.0% | |
| CCGATCATGAGGATTAAGCA+CGG | - | chr4_4:71725828-71725847 | None:intergenic | 45.0% | |
| CCGTGCTTAATCCTCATGAT+CGG | + | chr4_4:71725825-71725844 | Msa0700600:CDS | 45.0% | |
| ATGGGATTGGATCTTCCTTC+CGG | + | chr4_4:71725851-71725870 | Msa0700600:CDS | 45.0% | |
| ATGGTTACTACACTTCCGGT+GGG | + | chr4_4:71725888-71725907 | Msa0700600:CDS | 45.0% | |
| !!! | AAGCGTTGGATTTTAGGCCT+AGG | + | chr4_4:71726005-71726024 | Msa0700600:CDS | 45.0% |
| !! | AGGCCTAGGTTGATTATCTG+TGG | + | chr4_4:71726019-71726038 | Msa0700600:CDS | 45.0% |
| CCACCACAGATAATCAACCT+AGG | - | chr4_4:71726025-71726044 | None:intergenic | 45.0% | |
| !! | CCTAGGTTGATTATCTGTGG+TGG | + | chr4_4:71726022-71726041 | Msa0700600:CDS | 45.0% |
| TAGTGCTTACCCTAGGGATT+GGG | + | chr4_4:71726045-71726064 | Msa0700600:CDS | 45.0% | |
| AGGGATGTTGCTGATAAGTG+TGG | + | chr4_4:71726082-71726101 | Msa0700600:CDS | 45.0% | |
| TCGAACCCCAGACAAATGAA+TGG | + | chr4_4:71727478-71727497 | Msa0700600:intron | 45.0% | |
| CGAACCCCAGACAAATGAAT+GGG | + | chr4_4:71727479-71727498 | Msa0700600:intron | 45.0% | |
| ! | GGCTTTATAAGCTCCCATCA+TGG | + | chr4_4:71727500-71727519 | Msa0700600:intron | 45.0% |
| ! | TATTTAGGGCCCGTTTGGAT+TGG | + | chr4_4:71727616-71727635 | Msa0700600:intron | 45.0% |
| ATACTATGGCCCGTTTGGAT+TGG | - | chr4_4:71727816-71727835 | None:intergenic | 45.0% | |
| TAGAAGATCATTCCAGCCCT+AGG | - | chr4_4:71728089-71728108 | None:intergenic | 45.0% | |
| ATTGTGAGGACCACCTTGAA+GGG | - | chr4_4:71728201-71728220 | None:intergenic | 45.0% | |
| CTGTTTCAAGGCAACAGCAA+GGG | - | chr4_4:71728237-71728256 | None:intergenic | 45.0% | |
| GGCATATGCCAAGCAAGTTA+AGG | + | chr4_4:71728277-71728296 | Msa0700600:CDS | 45.0% | |
| !! | TGCATTGGCCTTAACTTGCT+TGG | - | chr4_4:71728288-71728307 | None:intergenic | 45.0% |
| ! | AAGGGATACAGTCTTGTCAC+TGG | + | chr4_4:71728335-71728354 | Msa0700600:CDS | 45.0% |
| CTGAGAACCATCTTGTGTTG+TGG | + | chr4_4:71728363-71728382 | Msa0700600:CDS | 45.0% | |
| GAAGATCCCACAACACAAGA+TGG | - | chr4_4:71728373-71728392 | None:intergenic | 45.0% | |
| CCTTTACCAGTCAATCCAAG+AGG | - | chr4_4:71728398-71728417 | None:intergenic | 45.0% | |
| CCTCTTGGATTGACTGGTAA+AGG | + | chr4_4:71728395-71728414 | Msa0700600:intron | 45.0% | |
| GTTCTTTGCAGGAAACAAGG+TGG | + | chr4_4:71728492-71728511 | Msa0700600:intron | 45.0% | |
| CTGACTGGAGTTCTGTTAAC+AGG | + | chr4_4:71728924-71728943 | Msa0700600:intron | 45.0% | |
| AGTTCTGTTAACAGGTGCTC+CGG | + | chr4_4:71728932-71728951 | Msa0700600:intron | 45.0% | |
| ! | AACCAAGCCTCTAGAAGTCA+TGG | - | chr4_4:71728958-71728977 | None:intergenic | 45.0% |
| ACTCACACTAGAGATCCAGA+AGG | + | chr4_4:71729025-71729044 | Msa0700600:CDS | 45.0% | |
| ! | GAAGTTTTCCATGCTCCTTC+TGG | - | chr4_4:71729043-71729062 | None:intergenic | 45.0% |
| GGAGCATGGAAAACTTCTGA+AGG | + | chr4_4:71729046-71729065 | Msa0700600:CDS | 45.0% | |
| GAAGGATTTCAACAAGGGCT+TGG | + | chr4_4:71729064-71729083 | Msa0700600:CDS | 45.0% | |
| ATTTGGTATGCCTGGTTTCC+TGG | + | chr4_4:71729142-71729161 | Msa0700600:CDS | 45.0% | |
| ATCTCAGATACCAGGAAACC+AGG | - | chr4_4:71729155-71729174 | None:intergenic | 45.0% | |
| GTGAGACGTTGGATTTGAGA+GGG | - | chr4_4:71729198-71729217 | None:intergenic | 45.0% | |
| AGTGAGACGTTGGATTTGAG+AGG | - | chr4_4:71729199-71729218 | None:intergenic | 45.0% | |
| !!! | TGTAAAATTTTAAATAAATT+TGG | + | chr4_4:71726957-71726976 | Msa0700600:intron | 5.0% |
| !!! | GTAAAATTTTAAATAAATTT+GGG | + | chr4_4:71726958-71726977 | Msa0700600:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTTG+TGG | + | chr4_4:71727445-71727464 | Msa0700600:intron | 5.0% |
| TGTGGCCGTTGCTTAATCGT+TGG | - | chr4_4:71725334-71725353 | None:intergenic | 50.0% | |
| CGATTAGGTCGTGGATCTCT+GGG | - | chr4_4:71725529-71725548 | None:intergenic | 50.0% | |
| TCGATTAGGTCGTGGATCTC+TGG | - | chr4_4:71725530-71725549 | None:intergenic | 50.0% | |
| GAAAAACGTCGTCAATGCCG+CGG | + | chr4_4:71725554-71725573 | Msa0700600:CDS | 50.0% | |
| ATGCGATGAGTTCGATTCCG+CGG | - | chr4_4:71725574-71725593 | None:intergenic | 50.0% | |
| CGGAATCGAACTCATCGCAT+CGG | + | chr4_4:71725574-71725593 | Msa0700600:CDS | 50.0% | |
| ! | CAAATACTCCGAAGGCATGC+CGG | + | chr4_4:71725649-71725668 | Msa0700600:CDS | 50.0% |
| ! | AAATACTCCGAAGGCATGCC+GGG | + | chr4_4:71725650-71725669 | Msa0700600:CDS | 50.0% |
| ATGCCGGGTAACCGTTACTA+CGG | + | chr4_4:71725665-71725684 | Msa0700600:CDS | 50.0% | |
| ! | AAGCTTGAAGAGCGCGTGAA+CGG | - | chr4_4:71725727-71725746 | None:intergenic | 50.0% |
| GTGTAAGCGGCAAAATTCGC+CGG | - | chr4_4:71725803-71725822 | None:intergenic | 50.0% | |
| ATTAAGCACGGCGGTGTAAG+CGG | - | chr4_4:71725816-71725835 | None:intergenic | 50.0% | |
| ACCATGAGTCAAATGTCCGC+CGG | - | chr4_4:71725873-71725892 | None:intergenic | 50.0% | |
| CATGGTTACTACACTTCCGG+TGG | + | chr4_4:71725887-71725906 | Msa0700600:CDS | 50.0% | |
| TTCCGGTGGGAAGAAGATCT+CGG | + | chr4_4:71725901-71725920 | Msa0700600:CDS | 50.0% | |
| ! | TGGTGGTAGTGCTTACCCTA+GGG | + | chr4_4:71726039-71726058 | Msa0700600:CDS | 50.0% |
| GTAGTGCTTACCCTAGGGAT+TGG | + | chr4_4:71726044-71726063 | Msa0700600:CDS | 50.0% | |
| TCCCATCATGGCTCAATGTG+TGG | + | chr4_4:71727512-71727531 | Msa0700600:intron | 50.0% | |
| CCCACACATTGAGCCATGAT+GGG | - | chr4_4:71727516-71727535 | None:intergenic | 50.0% | |
| CCCATCATGGCTCAATGTGT+GGG | + | chr4_4:71727513-71727532 | Msa0700600:intron | 50.0% | |
| ACCCACACATTGAGCCATGA+TGG | - | chr4_4:71727517-71727536 | None:intergenic | 50.0% | |
| ACAAGAGTTTGAGGGGTCCT+AGG | + | chr4_4:71728069-71728088 | Msa0700600:CDS | 50.0% | |
| CAAGAGTTTGAGGGGTCCTA+GGG | + | chr4_4:71728070-71728089 | Msa0700600:CDS | 50.0% | |
| GGGCTGGAATGATCTTCTAC+AGG | + | chr4_4:71728090-71728109 | Msa0700600:CDS | 50.0% | |
| GGACCTAAACCACCCAAGAA+GGG | + | chr4_4:71728116-71728135 | Msa0700600:CDS | 50.0% | |
| CGTAAACTGCATTCTCAGGC+TGG | - | chr4_4:71728142-71728161 | None:intergenic | 50.0% | |
| ! | GCAGTTTTCCCTTCCCTTCA+AGG | + | chr4_4:71728185-71728204 | Msa0700600:CDS | 50.0% |
| ! | GTTTTCCCTTCCCTTCAAGG+TGG | + | chr4_4:71728188-71728207 | Msa0700600:CDS | 50.0% |
| GATTGTGAGGACCACCTTGA+AGG | - | chr4_4:71728202-71728221 | None:intergenic | 50.0% | |
| GGTCCTCACAATCACCAGAT+TGG | + | chr4_4:71728209-71728228 | Msa0700600:CDS | 50.0% | |
| GCACCAATCTGGTGATTGTG+AGG | - | chr4_4:71728215-71728234 | None:intergenic | 50.0% | |
| CCTGTTTCAAGGCAACAGCA+AGG | - | chr4_4:71728238-71728257 | None:intergenic | 50.0% | |
| !! | CCTTGCTGTTGCCTTGAAAC+AGG | + | chr4_4:71728235-71728254 | Msa0700600:CDS | 50.0% |
| AGGTGACATGGCCTGTTTCA+AGG | - | chr4_4:71728249-71728268 | None:intergenic | 50.0% | |
| TTGAAACAGGCCATGTCACC+TGG | + | chr4_4:71728248-71728267 | Msa0700600:CDS | 50.0% | |
| TGAAACAGGCCATGTCACCT+GGG | + | chr4_4:71728249-71728268 | Msa0700600:CDS | 50.0% | |
| TTGGCATATGCCTTGAACCC+AGG | - | chr4_4:71728269-71728288 | None:intergenic | 50.0% | |
| AAGGCCAATGCAGTTGCCAT+TGG | + | chr4_4:71728296-71728315 | Msa0700600:CDS | 50.0% | |
| ! | GGATACAGTCTTGTCACTGG+TGG | + | chr4_4:71728338-71728357 | Msa0700600:CDS | 50.0% |
| CGCGGTTTGATGTTCTTTGC+AGG | + | chr4_4:71728481-71728500 | Msa0700600:intron | 50.0% | |
| ! | TTTTGGCGATAGCAGTGCCT+TGG | + | chr4_4:71728561-71728580 | Msa0700600:CDS | 50.0% |
| TTACCAACTCGTACTCCTCC+TGG | - | chr4_4:71728589-71728608 | None:intergenic | 50.0% | |
| ! | AAGCCTCTAGAAGTCATGGC+CGG | - | chr4_4:71728954-71728973 | None:intergenic | 50.0% |
| CTAGTGTGAGTGTCACAGCA+CGG | - | chr4_4:71729016-71729035 | None:intergenic | 50.0% | |
| CTAGAGATCCAGAAGGAGCA+TGG | + | chr4_4:71729032-71729051 | Msa0700600:CDS | 50.0% | |
| GGATTTCAACAAGGGCTTGG+TGG | + | chr4_4:71729067-71729086 | Msa0700600:CDS | 50.0% | |
| TTCGCCGTCATCGAAGCTCT+CGG | + | chr4_4:71725611-71725630 | Msa0700600:CDS | 55.0% | |
| ACTGCCGAGAGCTTCGATGA+CGG | - | chr4_4:71725618-71725637 | None:intergenic | 55.0% | |
| GGATTGGATCTTCCTTCCGG+CGG | + | chr4_4:71725854-71725873 | Msa0700600:CDS | 55.0% | |
| TGAGTCAAATGTCCGCCGGA+AGG | - | chr4_4:71725869-71725888 | None:intergenic | 55.0% | |
| TCCGGCGGACATTTGACTCA+TGG | + | chr4_4:71725869-71725888 | Msa0700600:CDS | 55.0% | |
| ! | TCGGTTGGAGGAGAAAGCGT+TGG | + | chr4_4:71725991-71726010 | Msa0700600:CDS | 55.0% |
| ! | GTGGTGGTAGTGCTTACCCT+AGG | + | chr4_4:71726038-71726057 | Msa0700600:CDS | 55.0% |
| !! | TAGTGGCCTTGTTGCTGCTC+AGG | + | chr4_4:71726135-71726154 | Msa0700600:CDS | 55.0% |
| !! | AATGTCGGGGGCACTGGTTA+AGG | - | chr4_4:71727143-71727162 | None:intergenic | 55.0% |
| ! | TTTGTCTGGGGTTCGAACCC+CGG | - | chr4_4:71727474-71727493 | None:intergenic | 55.0% |
| GGGACCTAAACCACCCAAGA+AGG | + | chr4_4:71728115-71728134 | Msa0700600:CDS | 55.0% | |
| TGGCCCTTCTTGGGTGGTTT+AGG | - | chr4_4:71728122-71728141 | None:intergenic | 55.0% | |
| ! | TTCTCAGGCTGGCCCTTCTT+GGG | - | chr4_4:71728131-71728150 | None:intergenic | 55.0% |
| ! | ATTCTCAGGCTGGCCCTTCT+TGG | - | chr4_4:71728132-71728151 | None:intergenic | 55.0% |
| GAGGACCACCTTGAAGGGAA+GGG | - | chr4_4:71728196-71728215 | None:intergenic | 55.0% | |
| TGAGGACCACCTTGAAGGGA+AGG | - | chr4_4:71728197-71728216 | None:intergenic | 55.0% | |
| !! | CAACAGCAAGGGCACCAATC+TGG | - | chr4_4:71728226-71728245 | None:intergenic | 55.0% |
| TGCCTTGAACCCAGGTGACA+TGG | - | chr4_4:71728261-71728280 | None:intergenic | 55.0% | |
| TTGTGGGATCTTCGCCCTCT+TGG | + | chr4_4:71728380-71728399 | Msa0700600:CDS | 55.0% | |
| CTTCGCCCTCTTGGATTGAC+TGG | + | chr4_4:71728389-71728408 | Msa0700600:CDS | 55.0% | |
| ! | GGCCATGACTTCTAGAGGCT+TGG | + | chr4_4:71728953-71728972 | Msa0700600:CDS | 55.0% |
| TGAGTGTCACAGCACGGTGA+AGG | - | chr4_4:71729010-71729029 | None:intergenic | 55.0% | |
| !! | CAAGGGCTTGGTGGACAACA+AGG | + | chr4_4:71729076-71729095 | Msa0700600:CDS | 55.0% |
| TCTGGGTCGACGGTTACGAG+TGG | - | chr4_4:71725512-71725531 | None:intergenic | 60.0% | |
| GTCGTGGATCTCTGGGTCGA+CGG | - | chr4_4:71725522-71725541 | None:intergenic | 60.0% | |
| ! | GAGAGCTTCGATGACGGCGA+AGG | - | chr4_4:71725612-71725631 | None:intergenic | 60.0% |
| ACGGTTACCCGGCATGCCTT+CGG | - | chr4_4:71725660-71725679 | None:intergenic | 60.0% | |
| CCGCCGTAGTAACGGTTACC+CGG | - | chr4_4:71725671-71725690 | None:intergenic | 60.0% | |
| CCGGGTAACCGTTACTACGG+CGG | + | chr4_4:71725668-71725687 | Msa0700600:CDS | 60.0% | |
| ! | GAAGAGCGCGTGAACGGCAA+AGG | - | chr4_4:71725721-71725740 | None:intergenic | 60.0% |
| ! | TCAGCCTTACTCTGGCTCGC+CGG | + | chr4_4:71725781-71725800 | Msa0700600:CDS | 60.0% |
| CGCCGAGATCTTCTTCCCAC+CGG | - | chr4_4:71725906-71725925 | None:intergenic | 60.0% | |
| ! | AAGGGAAATGTCGGGGGCAC+TGG | - | chr4_4:71727149-71727168 | None:intergenic | 60.0% |
| AGTTTGAGGGGTCCTAGGGC+TGG | + | chr4_4:71728074-71728093 | Msa0700600:CDS | 60.0% | |
| GGCCATGTCACCTGGGTTCA+AGG | + | chr4_4:71728256-71728275 | Msa0700600:CDS | 60.0% | |
| GATAGCAGTGCCTTGGCTCC+AGG | + | chr4_4:71728568-71728587 | Msa0700600:CDS | 60.0% | |
| TCGTACTCCTCCTGGAGCCA+AGG | - | chr4_4:71728581-71728600 | None:intergenic | 60.0% | |
| ! | GCTCCAGGAGGAGTACGAGT+TGG | + | chr4_4:71728583-71728602 | Msa0700600:CDS | 60.0% |
| GCTCCGGCCATGACTTCTAG+AGG | + | chr4_4:71728948-71728967 | Msa0700600:CDS | 60.0% | |
| TTCGCCGGCGAGCCAGAGTA+AGG | - | chr4_4:71725788-71725807 | None:intergenic | 65.0% | |
| ! | TCAGGCTGGCCCTTCTTGGG+TGG | - | chr4_4:71728128-71728147 | None:intergenic | 65.0% |
| AGCAGTGCCTTGGCTCCAGG+AGG | + | chr4_4:71728571-71728590 | Msa0700600:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 71725276 | 71729518 | 71725276 | ID=Msa0700600;Name=Msa0700600 |
| chr4_4 | mRNA | 71725276 | 71729518 | 71725276 | ID=Msa0700600-mRNA-1;Parent=Msa0700600;Name=Msa0700600-mRNA-1;_AED=0.03;_eAED=0.03;_QI=203|1|1|1|1|1|4|328|471 |
| chr4_4 | exon | 71725276 | 71726156 | 71725276 | ID=Msa0700600-mRNA-1:exon:21839;Parent=Msa0700600-mRNA-1 |
| chr4_4 | exon | 71728020 | 71728410 | 71728020 | ID=Msa0700600-mRNA-1:exon:21840;Parent=Msa0700600-mRNA-1 |
| chr4_4 | exon | 71728503 | 71728604 | 71728503 | ID=Msa0700600-mRNA-1:exon:21841;Parent=Msa0700600-mRNA-1 |
| chr4_4 | exon | 71728946 | 71729518 | 71728946 | ID=Msa0700600-mRNA-1:exon:21842;Parent=Msa0700600-mRNA-1 |
| chr4_4 | five_prime_UTR | 71725276 | 71725478 | 71725276 | ID=Msa0700600-mRNA-1:five_prime_utr;Parent=Msa0700600-mRNA-1 |
| chr4_4 | CDS | 71725479 | 71726156 | 71725479 | ID=Msa0700600-mRNA-1:cds;Parent=Msa0700600-mRNA-1 |
| chr4_4 | CDS | 71728020 | 71728410 | 71728020 | ID=Msa0700600-mRNA-1:cds;Parent=Msa0700600-mRNA-1 |
| chr4_4 | CDS | 71728503 | 71728604 | 71728503 | ID=Msa0700600-mRNA-1:cds;Parent=Msa0700600-mRNA-1 |
| chr4_4 | CDS | 71728946 | 71729190 | 71728946 | ID=Msa0700600-mRNA-1:cds;Parent=Msa0700600-mRNA-1 |
| chr4_4 | three_prime_UTR | 71729191 | 71729518 | 71729191 | ID=Msa0700600-mRNA-1:three_prime_utr;Parent=Msa0700600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
