Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408550 | XP_003629601.1 | 99.363 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 0.0 | 975 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408550 | sp|O23254|GLYC4_ARATH | 88.747 | 471 | 53 | 0 | 1 | 471 | 1 | 471 | 0.0 | 889 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408550 | G7LH57 | 99.363 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 0.0 | 975 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0617690 | Msa1408550 | 0.866946 | 1.965336e-65 | -8.615850e-47 |
| Msa0700600 | Msa1408550 | 0.959443 | 1.901041e-117 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408550 | MtrunA17_Chr8g0378091 | 99.363 | 471 | 3 | 0 | 1 | 471 | 1 | 471 | 0.0 | 975 |
| Msa1408550 | MtrunA17_Chr3g0121851 | 93.418 | 471 | 31 | 0 | 1 | 471 | 1 | 471 | 0.0 | 928 |
| Msa1408550 | MtrunA17_Chr2g0277581 | 64.224 | 464 | 161 | 1 | 4 | 462 | 128 | 591 | 0.0 | 648 |
| Msa1408550 | MtrunA17_Chr3g0115291 | 63.991 | 461 | 158 | 2 | 7 | 462 | 118 | 575 | 0.0 | 633 |
| Msa1408550 | MtrunA17_Chr5g0428001 | 58.030 | 467 | 187 | 5 | 9 | 469 | 42 | 505 | 0.0 | 556 |
| Msa1408550 | MtrunA17_Chr5g0411661 | 58.155 | 466 | 188 | 4 | 9 | 469 | 53 | 516 | 0.0 | 554 |
| Msa1408550 | MtrunA17_Chr2g0285171 | 57.860 | 458 | 173 | 5 | 12 | 461 | 87 | 532 | 0.0 | 537 |
| Msa1408550 | MtrunA17_Chr7g0268951 | 63.068 | 176 | 64 | 1 | 37 | 212 | 1 | 175 | 1.72e-72 | 227 |
| Msa1408550 | MtrunA17_Chr1g0186271 | 29.532 | 342 | 176 | 7 | 127 | 462 | 10 | 292 | 1.12e-39 | 145 |
| Msa1408550 | MtrunA17_Chr7g0268941 | 39.735 | 151 | 85 | 2 | 318 | 462 | 16 | 166 | 2.40e-29 | 113 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1408550 | AT4G13930.1 | 88.747 | 471 | 53 | 0 | 1 | 471 | 1 | 471 | 0.0 | 889 |
| Msa1408550 | AT4G13890.1 | 78.205 | 468 | 102 | 0 | 1 | 468 | 1 | 468 | 0.0 | 794 |
| Msa1408550 | AT4G13890.2 | 79.284 | 391 | 81 | 0 | 1 | 391 | 1 | 391 | 0.0 | 674 |
| Msa1408550 | AT1G36370.1 | 62.446 | 466 | 170 | 1 | 4 | 464 | 130 | 595 | 0.0 | 629 |
| Msa1408550 | AT1G22020.2 | 62.069 | 464 | 171 | 1 | 4 | 462 | 134 | 597 | 0.0 | 623 |
| Msa1408550 | AT1G22020.1 | 62.069 | 464 | 171 | 1 | 4 | 462 | 134 | 597 | 0.0 | 623 |
| Msa1408550 | AT4G32520.2 | 59.570 | 465 | 169 | 6 | 3 | 461 | 77 | 528 | 0.0 | 567 |
| Msa1408550 | AT4G32520.1 | 59.570 | 465 | 169 | 6 | 3 | 461 | 77 | 528 | 0.0 | 567 |
| Msa1408550 | AT4G37930.1 | 57.692 | 468 | 191 | 4 | 9 | 471 | 52 | 517 | 0.0 | 565 |
| Msa1408550 | AT5G26780.1 | 56.197 | 468 | 198 | 4 | 9 | 471 | 52 | 517 | 0.0 | 546 |
| Msa1408550 | AT5G26780.4 | 56.197 | 468 | 198 | 4 | 9 | 471 | 52 | 517 | 0.0 | 546 |
| Msa1408550 | AT5G26780.2 | 54.752 | 484 | 196 | 6 | 9 | 471 | 52 | 533 | 0.0 | 537 |
| Msa1408550 | AT5G26780.3 | 54.752 | 484 | 196 | 6 | 9 | 471 | 52 | 533 | 0.0 | 537 |
Find 175 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCCCACATTTCCAATTA+TGG | 0.127617 | tig0023390:-8766 | Msa1408550:exon |
| ATTCTCAGGCTGGCCCTTCT+TGG | 0.198683 | tig0023390:+5953 | None:intergenic |
| ATTTGGTATGCCTGGTTTCC+TGG | 0.216412 | tig0023390:-4941 | Msa1408550:CDS |
| TGGCCCTTCTTGGGTGGTTT+AGG | 0.220073 | tig0023390:+5963 | None:intergenic |
| TAATCCTCATGATCGGATTA+TGG | 0.228344 | tig0023390:-8394 | Msa1408550:CDS |
| CTTAATCGTTGGTTAGTTTA+TGG | 0.235348 | tig0023390:+8908 | None:intergenic |
| CTTTGAGAGTTTGCCGTATA+AGG | 0.255272 | tig0023390:-8289 | Msa1408550:CDS |
| AGTTTATGGTAGTTGGTTAT+TGG | 0.278253 | tig0023390:+8922 | None:intergenic |
| TCGATTAGGTCGTGGATCTC+TGG | 0.281015 | tig0023390:+8699 | None:intergenic |
| ACTCATGGTTACTATACTTC+TGG | 0.285243 | tig0023390:-8342 | Msa1408550:CDS |
| TTCTCAGGCTGGCCCTTCTT+GGG | 0.286161 | tig0023390:+5954 | None:intergenic |
| TCGTTAACGGGATCCATAAT+TGG | 0.290094 | tig0023390:+8753 | None:intergenic |
| GAGAAGTTCTCTTCTTCATT+TGG | 0.300016 | tig0023390:-4958 | Msa1408550:CDS |
| ATTGGGATTATAAACGGTTT+AGG | 0.311040 | tig0023390:-8164 | Msa1408550:CDS |
| CATGATATCACACTCAAAAT+AGG | 0.316379 | tig0023390:+4822 | None:intergenic |
| TTGGGATTATAAACGGTTTA+GGG | 0.317920 | tig0023390:-8163 | Msa1408550:CDS |
| TAAATTTAACATGTAGTTGC+AGG | 0.324733 | tig0023390:+4621 | None:intergenic |
| ATGGGATTGGATCTTCCTTC+AGG | 0.332967 | tig0023390:-8375 | Msa1408550:CDS |
| AATCCTCATGATCGGATTAT+GGG | 0.338677 | tig0023390:-8393 | Msa1408550:CDS |
| CCTTGCTGTTGCCTTGAAAC+AGG | 0.346168 | tig0023390:-5847 | Msa1408550:CDS |
| TCATATCGATCCACAATCTT+GGG | 0.348360 | tig0023390:-8478 | Msa1408550:CDS |
| GAAAAGGACTTTGAGAAGAT+TGG | 0.349310 | tig0023390:-5105 | Msa1408550:CDS |
| TCTTCTTCATTTGGTATGCC+TGG | 0.356704 | tig0023390:-4949 | Msa1408550:CDS |
| TTCATATCGATCCACAATCT+TGG | 0.361702 | tig0023390:-8479 | Msa1408550:CDS |
| TAGTGGCCTTGTTGCTGCTC+AGG | 0.366141 | tig0023390:-8091 | Msa1408550:intron |
| TTGTGGGATCTTCGCCCTCT+TGG | 0.377790 | tig0023390:-5702 | Msa1408550:CDS |
| TTCGGAGTATTTGTTTGTTA+AGG | 0.379837 | tig0023390:+8587 | None:intergenic |
| AGTAGATTTGTTGTTCTTTG+AGG | 0.380237 | tig0023390:-4585 | None:intergenic |
| GTTGGTTAGTTTATGGTAGT+TGG | 0.381318 | tig0023390:+8915 | None:intergenic |
| CGATTAGGTCGTGGATCTCT+GGG | 0.381977 | tig0023390:+8700 | None:intergenic |
| TTGTTACCCCATTCGTTAAC+GGG | 0.382478 | tig0023390:+8741 | None:intergenic |
| TTCTAGAGGCTTGGTTGAAA+AGG | 0.401166 | tig0023390:-5121 | Msa1408550:CDS |
| TAGTGCTTACCCTAGGGATT+GGG | 0.404659 | tig0023390:-8181 | Msa1408550:CDS |
| ACAAGAGTTTGAGGGGTCCT+AGG | 0.411398 | tig0023390:-6013 | Msa1408550:CDS |
| CTAGGGATTGGGATTATAAA+CGG | 0.417514 | tig0023390:-8170 | Msa1408550:CDS |
| TTGAAACAGGCCATGTCACC+TGG | 0.428213 | tig0023390:-5834 | Msa1408550:CDS |
| TGCATTGGCCTTAACTTGCT+TGG | 0.435848 | tig0023390:+5797 | None:intergenic |
| GGCCATGTCACCTGGGTTCA+AGG | 0.436813 | tig0023390:-5826 | Msa1408550:CDS |
| GAAGGATTTCAACAAGGGCT+TGG | 0.437560 | tig0023390:-5019 | Msa1408550:CDS |
| AAATACTCCGAAGGCATGCC+GGG | 0.440063 | tig0023390:-8576 | Msa1408550:CDS |
| TTACCAACTCGTACTCCTCC+TGG | 0.440340 | tig0023390:+5496 | None:intergenic |
| TTTGTTACCCCATTCGTTAA+CGG | 0.443616 | tig0023390:+8740 | None:intergenic |
| GGCCATGACTTCTAGAGGCT+TGG | 0.443671 | tig0023390:-5130 | Msa1408550:CDS |
| TCATGATCGGATTATGGGAT+TGG | 0.447111 | tig0023390:-8388 | Msa1408550:CDS |
| AGGTGACATGGCCTGTTTCA+AGG | 0.449189 | tig0023390:+5836 | None:intergenic |
| GTAGTGCTTACCCTAGGGAT+TGG | 0.449816 | tig0023390:-8182 | Msa1408550:CDS |
| GATAGCAGTGCCTTGGCTCC+AGG | 0.451399 | tig0023390:-5514 | Msa1408550:CDS |
| CAACAGCAAGGGCACCAATC+TGG | 0.454079 | tig0023390:+5859 | None:intergenic |
| GGCATATGCCAAGCAAGTTA+AGG | 0.458758 | tig0023390:-5805 | Msa1408550:CDS |
| TATGGATCCCGTTAACGAAT+GGG | 0.460396 | tig0023390:-8748 | Msa1408550:CDS |
| AAGAGTGGAATGAATGAGAA+TGG | 0.473078 | tig0023390:+8808 | None:intergenic |
| CTTCGCCCTCTTGGATTGAC+TGG | 0.475593 | tig0023390:-5693 | Msa1408550:intron |
| CAACAACTCACAAGAGTTTG+AGG | 0.475648 | tig0023390:-6022 | Msa1408550:CDS |
| ACGGTTACCCGGCATGCCTT+CGG | 0.480831 | tig0023390:+8569 | None:intergenic |
| CACAACACTCAATTAACGCT+TGG | 0.482881 | tig0023390:-8878 | Msa1408550:five_prime_UTR |
| GTGGTGGTAGTGCTTACCCT+AGG | 0.483011 | tig0023390:-8188 | Msa1408550:CDS |
| CATACAAGCCACTTAGCAAA+AGG | 0.484796 | tig0023390:+4683 | None:intergenic |
| AAATCGTAAACTGCATTCTC+AGG | 0.485003 | tig0023390:+5939 | None:intergenic |
| CAAATACTCCGAAGGCATGC+CGG | 0.485477 | tig0023390:-8577 | Msa1408550:CDS |
| ATTTCCAATGGCAACTGCAT+TGG | 0.485964 | tig0023390:+5782 | None:intergenic |
| AGTTTGAGGGGTCCTAGGGC+TGG | 0.488241 | tig0023390:-6008 | Msa1408550:CDS |
| CGTAAACTGCATTCTCAGGC+TGG | 0.492457 | tig0023390:+5943 | None:intergenic |
| CTTCTGAAGGATTTCAACAA+GGG | 0.500755 | tig0023390:-5024 | Msa1408550:CDS |
| TGTGTCGGTTGTGTTTAAAA+AGG | 0.502519 | tig0023390:+8840 | None:intergenic |
| GTCGTCGAATTCACCTTATA+CGG | 0.506731 | tig0023390:+8276 | None:intergenic |
| GGGATCCATAATTGGAAATG+TGG | 0.508919 | tig0023390:+8761 | None:intergenic |
| AAGGCCAATGCAGTTGCCAT+TGG | 0.512235 | tig0023390:-5786 | Msa1408550:CDS |
| TCAGGCTGGCCCTTCTTGGG+TGG | 0.515292 | tig0023390:+5957 | None:intergenic |
| GGGCTGGAATGATCTTCTAC+AGG | 0.516037 | tig0023390:-5992 | Msa1408550:CDS |
| GGGACCTAAACCACCCAAGA+AGG | 0.517255 | tig0023390:-5967 | Msa1408550:CDS |
| TGAGAACCATCTTGTGTTGT+GGG | 0.518139 | tig0023390:-5718 | Msa1408550:CDS |
| TCAGGTGGACATTTGACTCA+TGG | 0.518530 | tig0023390:-8357 | Msa1408550:CDS |
| TGGAAATTACTTGATGAGCA+AGG | 0.520445 | tig0023390:-5766 | Msa1408550:CDS |
| CGTTTATAATCCCAATCCCT+AGG | 0.523617 | tig0023390:+8171 | None:intergenic |
| AGGCCTAGGTTGATTATCTG+TGG | 0.524395 | tig0023390:-8207 | Msa1408550:CDS |
| GTTAACGTTCAGCCTTACTC+TGG | 0.524720 | tig0023390:-8453 | Msa1408550:CDS |
| GGATTTCAACAAGGGCTTGG+TGG | 0.525840 | tig0023390:-5016 | Msa1408550:CDS |
| AGTGAGACGTTGGATTTGAG+AGG | 0.529073 | tig0023390:+4887 | None:intergenic |
| CAAGAGTTTGAGGGGTCCTA+GGG | 0.529217 | tig0023390:-6012 | Msa1408550:CDS |
| GTCGTGGATCTCTGGGTCGA+CGG | 0.531722 | tig0023390:+8707 | None:intergenic |
| TTCGCCGGTGAACCAGAGTA+AGG | 0.533517 | tig0023390:+8441 | None:intergenic |
| GTGAGACGTTGGATTTGAGA+GGG | 0.534340 | tig0023390:+4888 | None:intergenic |
| TAGGTTGGAGGAGAAAGCGT+TGG | 0.534852 | tig0023390:-8235 | Msa1408550:CDS |
| GAAGAGCGCGTGAACGGCAA+AGG | 0.536667 | tig0023390:+8508 | None:intergenic |
| GGAAATTACTTGATGAGCAA+GGG | 0.542211 | tig0023390:-5765 | Msa1408550:CDS |
| TGAATGAATGAAAGAAAGAG+TGG | 0.543244 | tig0023390:+8793 | None:intergenic |
| CACAATGTCACAGTACTCAA+AGG | 0.544775 | tig0023390:+6049 | None:intergenic |
| ACAATGTCACAGTACTCAAA+GGG | 0.547706 | tig0023390:+6050 | None:intergenic |
| TGGTGGTAGTGCTTACCCTA+GGG | 0.548765 | tig0023390:-8187 | Msa1408550:CDS |
| AACAACTCACAAGAGTTTGA+GGG | 0.550530 | tig0023390:-6021 | Msa1408550:CDS |
| TATTGATTATGATAGGTTGG+AGG | 0.550910 | tig0023390:-8247 | Msa1408550:CDS |
| TTGGCATATGCCTTGAACCC+AGG | 0.551473 | tig0023390:+5816 | None:intergenic |
| AAGCTTGAAGAGCGCGTGAA+CGG | 0.551498 | tig0023390:+8502 | None:intergenic |
| TAGAAGATCATTCCAGCCCT+AGG | 0.552646 | tig0023390:+5996 | None:intergenic |
| TGCCTTGAACCCAGGTGACA+TGG | 0.553241 | tig0023390:+5824 | None:intergenic |
| TCAAACTTTGAGTGAGACGT+TGG | 0.553745 | tig0023390:+4877 | None:intergenic |
| ATTGTGAGGACCACCTTGAA+GGG | 0.554639 | tig0023390:+5884 | None:intergenic |
| ATTCGTTACCGCCGTAGTAA+CGG | 0.557823 | tig0023390:+8550 | None:intergenic |
| CATATCGATCCACAATCTTG+GGG | 0.560138 | tig0023390:-8477 | Msa1408550:CDS |
| TTATGGATCCCGTTAACGAA+TGG | 0.563507 | tig0023390:-8749 | Msa1408550:CDS |
| GATGTTCTTTGCAGGAAACA+AGG | 0.566091 | tig0023390:-5593 | Msa1408550:intron |
| TGAGGACCACCTTGAAGGGA+AGG | 0.566539 | tig0023390:+5888 | None:intergenic |
| CAAGGGCTTGGTGGACAACA+AGG | 0.566901 | tig0023390:-5007 | Msa1408550:CDS |
| AACCAAGCCTCTAGAAGTCA+TGG | 0.567694 | tig0023390:+5128 | None:intergenic |
| GGTCCTCACAATCACCAGAT+TGG | 0.567733 | tig0023390:-5873 | Msa1408550:CDS |
| GATTGTGAGGACCACCTTGA+AGG | 0.568372 | tig0023390:+5883 | None:intergenic |
| GAGAGCTTCGATGACGGCGA+AGG | 0.570081 | tig0023390:+8617 | None:intergenic |
| CCGCCGTAGTAACGGTTACC+CGG | 0.570379 | tig0023390:+8558 | None:intergenic |
| ATCTCAGATACCAGGAAACC+AGG | 0.570656 | tig0023390:+4931 | None:intergenic |
| ACGTTAACTCCCCAAGATTG+TGG | 0.570906 | tig0023390:+8468 | None:intergenic |
| CATGGTTACTATACTTCTGG+TGG | 0.572834 | tig0023390:-8339 | Msa1408550:CDS |
| TTCTGGTGGGAAGAAGATCT+CGG | 0.577762 | tig0023390:-8325 | Msa1408550:CDS |
| TCGTACTCCTCCTGGAGCCA+AGG | 0.577883 | tig0023390:+5504 | None:intergenic |
| TGTGGCCGTTGCTTAATCGT+TGG | 0.578249 | tig0023390:+8897 | None:intergenic |
| GCTCATCAAGTAATTTCCAA+TGG | 0.578871 | tig0023390:+5770 | None:intergenic |
| GGAGCATGGAAAACTTCTGA+AGG | 0.579867 | tig0023390:-5037 | Msa1408550:CDS |
| GTGTAAGCAGCGAAATTCGC+CGG | 0.580461 | tig0023390:+8426 | None:intergenic |
| CTAGAGATCCAGAAGGAGCA+TGG | 0.581707 | tig0023390:-5051 | Msa1408550:CDS |
| CTGAGAACCATCTTGTGTTG+TGG | 0.583570 | tig0023390:-5719 | Msa1408550:CDS |
| GGATTGGATCTTCCTTCAGG+TGG | 0.584238 | tig0023390:-8372 | Msa1408550:CDS |
| ACTTCTGAAGGATTTCAACA+AGG | 0.584978 | tig0023390:-5025 | Msa1408550:CDS |
| AAGGGATACAGTCTTGTCAC+TGG | 0.587154 | tig0023390:-5747 | Msa1408550:CDS |
| TTCGCCGTCATCGAAGCTCT+CGG | 0.587338 | tig0023390:-8615 | Msa1408550:CDS |
| TGGAATGATCTTCTACAGGA+AGG | 0.588696 | tig0023390:-5988 | Msa1408550:CDS |
| TGAGTGTCACAGCACGGTGA+AGG | 0.589218 | tig0023390:+5076 | None:intergenic |
| GGATCCATAATTGGAAATGT+GGG | 0.597850 | tig0023390:+8762 | None:intergenic |
| GAAGATCCCACAACACAAGA+TGG | 0.603113 | tig0023390:+5712 | None:intergenic |
| CTGTTTCAAGGCAACAGCAA+GGG | 0.603551 | tig0023390:+5848 | None:intergenic |
| CCTAGGTTGATTATCTGTGG+TGG | 0.604842 | tig0023390:-8204 | Msa1408550:CDS |
| AGTTCTGTTAACAGGTGCTC+CGG | 0.607108 | tig0023390:-5151 | Msa1408550:intron |
| TATAAGGTGAATTCGACGAC+TGG | 0.610662 | tig0023390:-8273 | Msa1408550:CDS |
| GGAATGATCTTCTACAGGAA+GGG | 0.611076 | tig0023390:-5987 | Msa1408550:CDS |
| GGATACAGTCTTGTCACTGG+TGG | 0.612060 | tig0023390:-5744 | Msa1408550:CDS |
| TGAGTCAAATGTCCACCTGA+AGG | 0.612892 | tig0023390:+8360 | None:intergenic |
| GGACCTAAACCACCCAAGAA+GGG | 0.613785 | tig0023390:-5966 | Msa1408550:CDS |
| GCTCCGGCCATGACTTCTAG+AGG | 0.616605 | tig0023390:-5135 | Msa1408550:CDS |
| CCGTGCTTAATCCTCATGAT+CGG | 0.621696 | tig0023390:-8401 | Msa1408550:CDS |
| TGTACTTCATCTCAGATACC+AGG | 0.622326 | tig0023390:+4923 | None:intergenic |
| GTTTATAATCCCAATCCCTA+GGG | 0.625521 | tig0023390:+8172 | None:intergenic |
| AGGGATGTTGCTGATAAGTG+TGG | 0.626741 | tig0023390:-8144 | Msa1408550:CDS |
| TGAAACAGGCCATGTCACCT+GGG | 0.627178 | tig0023390:-5833 | Msa1408550:CDS |
| GCACCAATCTGGTGATTGTG+AGG | 0.629254 | tig0023390:+5870 | None:intergenic |
| AAGCCTCTAGAAGTCATGGC+CGG | 0.629761 | tig0023390:+5132 | None:intergenic |
| CCTGTTTCAAGGCAACAGCA+AGG | 0.630010 | tig0023390:+5847 | None:intergenic |
| ACTGCCGAGAGCTTCGATGA+CGG | 0.631255 | tig0023390:+8611 | None:intergenic |
| TTTATACCTGAGCAGCAACA+AGG | 0.632475 | tig0023390:+8085 | None:intergenic |
| CGGAATCGAACTCATCGCAT+CGG | 0.632638 | tig0023390:-8652 | Msa1408550:CDS |
| GGTATCTGAGATGAAGTACA+AGG | 0.632761 | tig0023390:-4920 | Msa1408550:CDS |
| GCTCCAGGAGGAGTACGAGT+TGG | 0.634787 | tig0023390:-5499 | Msa1408550:intron |
| TCAGCCTTACTCTGGTTCAC+CGG | 0.636199 | tig0023390:-8445 | Msa1408550:CDS |
| CTCACTCAAAGTTTGAGACA+AGG | 0.636420 | tig0023390:-4870 | Msa1408550:three_prime_UTR |
| CCACCACAGATAATCAACCT+AGG | 0.638606 | tig0023390:+8204 | None:intergenic |
| ATGCCGGGTAACCGTTACTA+CGG | 0.640626 | tig0023390:-8561 | Msa1408550:CDS |
| CAAGCGTTAATTGAGTGTTG+TGG | 0.640834 | tig0023390:+8879 | None:intergenic |
| CTTTACCAGTCAATCCAAGA+GGG | 0.641081 | tig0023390:+5688 | None:intergenic |
| TTAACAAACAAATACTCCGA+AGG | 0.642664 | tig0023390:-8585 | Msa1408550:CDS |
| ATGGATCCCGTTAACGAATG+GGG | 0.646563 | tig0023390:-8747 | Msa1408550:CDS |
| AATCCCATAATCCGATCATG+AGG | 0.648526 | tig0023390:+8390 | None:intergenic |
| ATGGTTACTATACTTCTGGT+GGG | 0.651704 | tig0023390:-8338 | Msa1408550:CDS |
| TCTGGGTCGACGGTTACGAG+TGG | 0.653406 | tig0023390:+8717 | None:intergenic |
| ATGCGATGAGTTCGATTCCG+CGG | 0.660307 | tig0023390:+8655 | None:intergenic |
| GAGGACCACCTTGAAGGGAA+GGG | 0.667267 | tig0023390:+5889 | None:intergenic |
| TGTTGACTGTGATGTTACAG+AGG | 0.668976 | tig0023390:+5554 | None:intergenic |
| ACTAACCAACGATTAAGCAA+CGG | 0.671693 | tig0023390:-8902 | Msa1408550:five_prime_UTR |
| ACTCAAAGTTTGAGACAAGG+TGG | 0.675922 | tig0023390:-4867 | Msa1408550:three_prime_UTR |
| ACAACTCACAAGAGTTTGAG+GGG | 0.676117 | tig0023390:-6020 | Msa1408550:CDS |
| GAATGGAAATGTGTGTGTGT+CGG | 0.681473 | tig0023390:+8825 | None:intergenic |
| CCGATCATGAGGATTAAGCA+CGG | 0.689739 | tig0023390:+8401 | None:intergenic |
| GTTCTTTGCAGGAAACAAGG+TGG | 0.691862 | tig0023390:-5590 | Msa1408550:intron |
| AGCAGTGCCTTGGCTCCAGG+AGG | 0.693630 | tig0023390:-5511 | Msa1408550:CDS |
| CCTTTACCAGTCAATCCAAG+AGG | 0.696201 | tig0023390:+5687 | None:intergenic |
| CTAGTGTGAGTGTCACAGCA+CGG | 0.697489 | tig0023390:+5070 | None:intergenic |
| CCGGGTAACCGTTACTACGG+CGG | 0.702920 | tig0023390:-8558 | Msa1408550:CDS |
| ACTCACACTAGAGATCCAGA+AGG | 0.729137 | tig0023390:-5058 | Msa1408550:CDS |
| ATCATGAGGATTAAGCACGG+CGG | 0.835014 | tig0023390:+8404 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATCTGATTTTTAATTTAA+TGG | - | tig0023390:5596-5615 | Msa1408550:intron | 10.0% |
| !!! | CTATTGATTTTAAAATTTTA+AGG | - | tig0023390:6111-6130 | Msa1408550:intron | 10.0% |
| !!! | TTAAAATTTTAAGGATTTTA+TGG | - | tig0023390:6120-6139 | Msa1408550:intron | 10.0% |
| !! | TATTAAGAAAAAATATGATT+AGG | + | tig0023390:8804-8823 | None:intergenic | 10.0% |
| !! | TATGAATCTAATTAACATAA+CGG | + | tig0023390:5510-5529 | None:intergenic | 15.0% |
| !!! | ATGGGATTTTAAAATTTTAA+AGG | - | tig0023390:5970-5989 | Msa1408550:CDS | 15.0% |
| !!! | ATAGCAAAAGAATTTTTTAT+TGG | + | tig0023390:6095-6114 | None:intergenic | 15.0% |
| !!! | ATGGATTTTATAAGATTTTA+AGG | - | tig0023390:6139-6158 | Msa1408550:intron | 15.0% |
| !!! | TGGATTTTATAAGATTTTAA+GGG | - | tig0023390:6140-6159 | Msa1408550:intron | 15.0% |
| !! | TAACAAATAAAAAATGTGTA+TGG | + | tig0023390:6196-6215 | None:intergenic | 15.0% |
| !!! | TTTTTTTGAAAGATTTGTAA+GGG | + | tig0023390:6269-6288 | None:intergenic | 15.0% |
| !!! | TTTTTTTTGAAAGATTTGTA+AGG | + | tig0023390:6270-6289 | None:intergenic | 15.0% |
| !!! | TTTAATAAATTGGATTTTGA+TGG | + | tig0023390:6592-6611 | None:intergenic | 15.0% |
| !!! | ACATTAGTATTTTACATTTA+GGG | + | tig0023390:6837-6856 | None:intergenic | 15.0% |
| !!! | TACATTAGTATTTTACATTT+AGG | + | tig0023390:6838-6857 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTTTTGTGG+TGG | - | tig0023390:6905-6924 | Msa1408550:intron | 15.0% |
| !! | TAAATATTATTGATGTTCTT+GGG | + | tig0023390:7059-7078 | None:intergenic | 15.0% |
| !! | AAGAACATCAATAATATTTA+GGG | - | tig0023390:7059-7078 | Msa1408550:intron | 15.0% |
| !! | TTGAGTAAAATATAAAACAA+AGG | + | tig0023390:8355-8374 | None:intergenic | 15.0% |
| !!! | TTTGTTTTATATTTTACTCA+AGG | - | tig0023390:8354-8373 | Msa1408550:CDS | 15.0% |
| !!! | CAAAAAAAGAAATTAAGTTT+TGG | - | tig0023390:8754-8773 | Msa1408550:exon | 15.0% |
| !!! | TTTTATTGATTATGATAGGT+TGG | - | tig0023390:5289-5308 | Msa1408550:intron | 20.0% |
| !!! | TTATACACTCAAGATTTTAA+TGG | - | tig0023390:5909-5928 | Msa1408550:CDS | 20.0% |
| !!! | TAAAGGATTCAATGAATTTT+AGG | - | tig0023390:5987-6006 | Msa1408550:CDS | 20.0% |
| !!! | AAAGGATTCAATGAATTTTA+GGG | - | tig0023390:5988-6007 | Msa1408550:CDS | 20.0% |
| !! | TATGTACAATTGAATATTGT+GGG | + | tig0023390:6230-6249 | None:intergenic | 20.0% |
| !! | ATATGTACAATTGAATATTG+TGG | + | tig0023390:6231-6250 | None:intergenic | 20.0% |
| !! | TAATTTCAAACACAAAATGA+GGG | + | tig0023390:6304-6323 | None:intergenic | 20.0% |
| !! | ATCATTTAAAAAAAGTCTCA+TGG | + | tig0023390:6646-6665 | None:intergenic | 20.0% |
| !! | TTAATTATGAAAAAGTCTTG+TGG | + | tig0023390:6772-6791 | None:intergenic | 20.0% |
| !!! | ATTAGTATTTTACATTTAGG+GGG | + | tig0023390:6835-6854 | None:intergenic | 20.0% |
| !!! | CATTAGTATTTTACATTTAG+GGG | + | tig0023390:6836-6855 | None:intergenic | 20.0% |
| !! | CTAAATATTATTGATGTTCT+TGG | + | tig0023390:7060-7079 | None:intergenic | 20.0% |
| !! | CAAGAACATCAATAATATTT+AGG | - | tig0023390:7058-7077 | Msa1408550:intron | 20.0% |
| !! | TAATGTAAGGATTTATTAGA+AGG | - | tig0023390:7350-7369 | Msa1408550:intron | 20.0% |
| !!! | ATAATATGACTTGTTTTGTT+TGG | - | tig0023390:7413-7432 | Msa1408550:intron | 20.0% |
| !!! | TATGGACTTAACTTTATTTT+CGG | - | tig0023390:8075-8094 | Msa1408550:intron | 20.0% |
| !! | ACAAATCAAATAATACTACT+TGG | + | tig0023390:8210-8229 | None:intergenic | 20.0% |
| !!! | GCATATTTACAATTTTTACA+TGG | + | tig0023390:8242-8261 | None:intergenic | 20.0% |
| !! | TATACAGTAACAAGATTAAA+AGG | + | tig0023390:8305-8324 | None:intergenic | 20.0% |
| !!! | CTGGTTTTATTGATTATGAT+AGG | - | tig0023390:5285-5304 | Msa1408550:intron | 25.0% |
| !!! | ATTTATCACACTGACTTTTA+AGG | - | tig0023390:5932-5951 | Msa1408550:CDS | 25.0% |
| !! | AAGGATTTCAAAGGATTTTA+TGG | - | tig0023390:5951-5970 | Msa1408550:CDS | 25.0% |
| !! | AGGATTTCAAAGGATTTTAT+GGG | - | tig0023390:5952-5971 | Msa1408550:CDS | 25.0% |
| !! | AAGGATTCAATGAATTTTAG+GGG | - | tig0023390:5989-6008 | Msa1408550:CDS | 25.0% |
| ! | CTAATTTCAAACACAAAATG+AGG | + | tig0023390:6305-6324 | None:intergenic | 25.0% |
| ! | ATGAAAAGATGAGATTTCTT+GGG | + | tig0023390:6523-6542 | None:intergenic | 25.0% |
| ! | CGAAGGATTGTTTAATAAAT+TGG | + | tig0023390:6602-6621 | None:intergenic | 25.0% |
| ! | CAAAATCATTCAAATTTCGA+AGG | + | tig0023390:6619-6638 | None:intergenic | 25.0% |
| !!! | GTCATTTTAAAAAAGTCTTG+AGG | + | tig0023390:6688-6707 | None:intergenic | 25.0% |
| !! | ATCGATAAACTTGTCTTTTA+AGG | - | tig0023390:6868-6887 | Msa1408550:intron | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | + | tig0023390:7198-7217 | None:intergenic | 25.0% |
| ! | TACTCCTTATAGTTATACTA+TGG | + | tig0023390:7287-7306 | None:intergenic | 25.0% |
| ! | AATAAATCCTTACATTACCA+AGG | + | tig0023390:7347-7366 | None:intergenic | 25.0% |
| ! | TTTATATTGCGTACTATTTC+TGG | - | tig0023390:7904-7923 | Msa1408550:intron | 25.0% |
| !! | CAAGTTGTTGTAAATTTTGT+TGG | - | tig0023390:8128-8147 | Msa1408550:CDS | 25.0% |
| ! | TAAATTTAACATGTAGTTGC+AGG | + | tig0023390:8921-8940 | None:intergenic | 25.0% |
| AGTTTATGGTAGTTGGTTAT+TGG | + | tig0023390:4620-4639 | None:intergenic | 30.0% | |
| !! | CTTAATCGTTGGTTAGTTTA+TGG | + | tig0023390:4634-4653 | None:intergenic | 30.0% |
| TGTGTTTAAAAAGGAAGAGA+TGG | + | tig0023390:4693-4712 | None:intergenic | 30.0% | |
| TGAATGAATGAAAGAAAGAG+TGG | + | tig0023390:4749-4768 | None:intergenic | 30.0% | |
| !!! | GACGTTTTTCTTTTTCGATT+AGG | + | tig0023390:4857-4876 | None:intergenic | 30.0% |
| ! | TTCGGAGTATTTGTTTGTTA+AGG | + | tig0023390:4955-4974 | None:intergenic | 30.0% |
| TTAACAAACAAATACTCCGA+AGG | - | tig0023390:4954-4973 | Msa1408550:CDS | 30.0% | |
| ! | TATTGATTATGATAGGTTGG+AGG | - | tig0023390:5292-5311 | Msa1408550:intron | 30.0% |
| ATTGGGATTATAAACGGTTT+AGG | - | tig0023390:5375-5394 | Msa1408550:intron | 30.0% | |
| TTGGGATTATAAACGGTTTA+GGG | - | tig0023390:5376-5395 | Msa1408550:intron | 30.0% | |
| !!! | TTTTTGTTCCGTTGATTTAG+AGG | - | tig0023390:5685-5704 | Msa1408550:intron | 30.0% |
| !!! | TTTTGTTCCGTTGATTTAGA+GGG | - | tig0023390:5686-5705 | Msa1408550:intron | 30.0% |
| TTCACTGTAAACAAACTATG+AGG | + | tig0023390:5726-5745 | None:intergenic | 30.0% | |
| ! | TTGTTGTTATCTATTCCATC+TGG | - | tig0023390:5780-5799 | Msa1408550:CDS | 30.0% |
| GATCTGTTGTTAAAGGTTAA+GGG | - | tig0023390:5802-5821 | Msa1408550:CDS | 30.0% | |
| ATCTGTTGTTAAAGGTTAAG+GGG | - | tig0023390:5803-5822 | Msa1408550:CDS | 30.0% | |
| !! | CTGACTTTTAAGGATTTCAA+AGG | - | tig0023390:5942-5961 | Msa1408550:CDS | 30.0% |
| CATGAAAAGATGAGATTTCT+TGG | + | tig0023390:6524-6543 | None:intergenic | 30.0% | |
| !!! | TGGATTTTGATGGATTTTGT+GGG | + | tig0023390:6582-6601 | None:intergenic | 30.0% |
| !!! | TTGGATTTTGATGGATTTTG+TGG | + | tig0023390:6583-6602 | None:intergenic | 30.0% |
| GCATCTTAAAAAAAGTCTTG+TGG | + | tig0023390:6730-6749 | None:intergenic | 30.0% | |
| ! | GTATTGGATTAGGATTCTAT+GGG | + | tig0023390:6810-6829 | None:intergenic | 30.0% |
| ! | TGTATTGGATTAGGATTCTA+TGG | + | tig0023390:6811-6830 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTTTTGTGGTGGC+CGG | - | tig0023390:6909-6928 | Msa1408550:intron | 30.0% |
| TTTATCATAGCCCAGTTTAT+AGG | + | tig0023390:7011-7030 | None:intergenic | 30.0% | |
| CTATGATAAACATTGATGCT+AGG | - | tig0023390:7021-7040 | Msa1408550:intron | 30.0% | |
| ! | TTATTGATGTTCTTGGGTTT+TGG | + | tig0023390:7053-7072 | None:intergenic | 30.0% |
| AAAAATAAGCCAATCCAAAC+GGG | + | tig0023390:7085-7104 | None:intergenic | 30.0% | |
| CAAAAATAAGCCAATCCAAA+CGG | + | tig0023390:7086-7105 | None:intergenic | 30.0% | |
| TAAGTTCTCACTAACGAAAA+TGG | - | tig0023390:7142-7161 | Msa1408550:intron | 30.0% | |
| CAAAAATTAGCCAATCCAAA+CGG | - | tig0023390:7260-7279 | Msa1408550:intron | 30.0% | |
| AAAAATTAGCCAATCCAAAC+GGG | - | tig0023390:7261-7280 | Msa1408550:intron | 30.0% | |
| !!! | TTGATTATTTTTAGCCACCT+TGG | - | tig0023390:7327-7346 | Msa1408550:intron | 30.0% |
| ! | TTGTCTCAAAGCTTTTCTTA+CGG | - | tig0023390:7387-7406 | Msa1408550:intron | 30.0% |
| !! | TAGTTATTTGTTGTGTGTAC+AGG | - | tig0023390:7455-7474 | Msa1408550:intron | 30.0% |
| ! | AACCAGGCAAGATAAATTTT+AGG | + | tig0023390:7886-7905 | None:intergenic | 30.0% |
| AATAGTACGCAATATAAACC+AGG | + | tig0023390:7902-7921 | None:intergenic | 30.0% | |
| !!! | GTCAACAAAAATGCTGTTTT+TGG | - | tig0023390:8001-8020 | Msa1408550:intron | 30.0% |
| !! | AGTTGGTAAGAAACTTTGTA+TGG | - | tig0023390:8057-8076 | Msa1408550:intron | 30.0% |
| ! | TTATTTTCGGAGTCTAAACT+TGG | - | tig0023390:8088-8107 | Msa1408550:intron | 30.0% |
| ! | TATTTTCGGAGTCTAAACTT+GGG | - | tig0023390:8089-8108 | Msa1408550:intron | 30.0% |
| GTTGGAAATCAATTTGATTG+AGG | - | tig0023390:8146-8165 | Msa1408550:CDS | 30.0% | |
| CTACTTGGTAAAGAAATGAA+AGG | + | tig0023390:8195-8214 | None:intergenic | 30.0% | |
| CATGATATCACACTCAAAAT+AGG | + | tig0023390:8720-8739 | None:intergenic | 30.0% | |
| !! | TTTTGAGTGTGATATCATGA+TGG | - | tig0023390:8721-8740 | Msa1408550:CDS | 30.0% |
| !! | GTTATTTTCCTTTTGCTAAG+TGG | - | tig0023390:8848-8867 | Msa1408550:five_prime_UTR | 30.0% |
| !! | GTTGGTTAGTTTATGGTAGT+TGG | + | tig0023390:4627-4646 | None:intergenic | 35.0% |
| ACTAACCAACGATTAAGCAA+CGG | - | tig0023390:4637-4656 | Msa1408550:three_prime_UTR | 35.0% | |
| !! | TGTGTCGGTTGTGTTTAAAA+AGG | + | tig0023390:4702-4721 | None:intergenic | 35.0% |
| AAGAGTGGAATGAATGAGAA+TGG | + | tig0023390:4734-4753 | None:intergenic | 35.0% | |
| CATTCCCACATTTCCAATTA+TGG | - | tig0023390:4773-4792 | Msa1408550:three_prime_UTR | 35.0% | |
| GGATCCATAATTGGAAATGT+GGG | + | tig0023390:4780-4799 | None:intergenic | 35.0% | |
| TTTGTTACCCCATTCGTTAA+CGG | + | tig0023390:4802-4821 | None:intergenic | 35.0% | |
| !!! | TTTCTTTTTCGATTAGGTCG+TGG | + | tig0023390:4851-4870 | None:intergenic | 35.0% |
| TTCATATCGATCCACAATCT+TGG | - | tig0023390:5060-5079 | Msa1408550:CDS | 35.0% | |
| TCATATCGATCCACAATCTT+GGG | - | tig0023390:5061-5080 | Msa1408550:CDS | 35.0% | |
| TAATCCTCATGATCGGATTA+TGG | - | tig0023390:5145-5164 | Msa1408550:intron | 35.0% | |
| AATCCTCATGATCGGATTAT+GGG | - | tig0023390:5146-5165 | Msa1408550:intron | 35.0% | |
| ACTCATGGTTACTATACTTC+TGG | - | tig0023390:5197-5216 | Msa1408550:intron | 35.0% | |
| ATGGTTACTATACTTCTGGT+GGG | - | tig0023390:5201-5220 | Msa1408550:intron | 35.0% | |
| GTTTATAATCCCAATCCCTA+GGG | + | tig0023390:5370-5389 | None:intergenic | 35.0% | |
| CTAGGGATTGGGATTATAAA+CGG | - | tig0023390:5369-5388 | Msa1408550:intron | 35.0% | |
| ! | TGCTCTTTTGCTTTGTGATA+TGG | - | tig0023390:5418-5437 | Msa1408550:intron | 35.0% |
| ! | TGTGATATGGCTCATTTTAG+TGG | - | tig0023390:5431-5450 | Msa1408550:intron | 35.0% |
| !! | TTTGTTCCGTTGATTTAGAG+GGG | - | tig0023390:5687-5706 | Msa1408550:intron | 35.0% |
| GGATCTGTTGTTAAAGGTTA+AGG | - | tig0023390:5801-5820 | Msa1408550:CDS | 35.0% | |
| TCTGTTGTTAAAGGTTAAGG+GGG | - | tig0023390:5804-5823 | Msa1408550:CDS | 35.0% | |
| !! | CGTTTGAGTTTTTCTAAGAG+AGG | - | tig0023390:6331-6350 | Msa1408550:intron | 35.0% |
| TTACATTTAGGGGGATGTAT+TGG | + | tig0023390:6826-6845 | None:intergenic | 35.0% | |
| !!! | TTTTTTTTTTTGTGGTGGCC+GGG | - | tig0023390:6910-6929 | Msa1408550:intron | 35.0% |
| TAAAGCCCATTCATTTGTCT+GGG | + | tig0023390:6944-6963 | None:intergenic | 35.0% | |
| ATAAAGCCCATTCATTTGTC+TGG | + | tig0023390:6945-6964 | None:intergenic | 35.0% | |
| ACAATGCCTTACCTATAAAC+TGG | - | tig0023390:6997-7016 | Msa1408550:intron | 35.0% | |
| CAATGCCTTACCTATAAACT+GGG | - | tig0023390:6998-7017 | Msa1408550:intron | 35.0% | |
| ! | AATAATATTTAGGGCCCGTT+TGG | - | tig0023390:7068-7087 | Msa1408550:intron | 35.0% |
| AAATCCTTACATTACCAAGG+TGG | + | tig0023390:7344-7363 | None:intergenic | 35.0% | |
| ACAATGTCACAGTACTCAAA+GGG | + | tig0023390:7492-7511 | None:intergenic | 35.0% | |
| AACAACTCACAAGAGTTTGA+GGG | - | tig0023390:7518-7537 | Msa1408550:intron | 35.0% | |
| AAATCGTAAACTGCATTCTC+AGG | + | tig0023390:7603-7622 | None:intergenic | 35.0% | |
| ! | GAATGCAGTTTACGATTTTG+AGG | - | tig0023390:7605-7624 | Msa1408550:intron | 35.0% |
| GCTCATCAAGTAATTTCCAA+TGG | + | tig0023390:7772-7791 | None:intergenic | 35.0% | |
| TGGAAATTACTTGATGAGCA+AGG | - | tig0023390:7773-7792 | Msa1408550:intron | 35.0% | |
| GGAAATTACTTGATGAGCAA+GGG | - | tig0023390:7774-7793 | Msa1408550:intron | 35.0% | |
| !! | GGCAAGATAAATTTTAGGTG+AGG | + | tig0023390:7881-7900 | None:intergenic | 35.0% |
| CACCTAAAATTTATCTTGCC+TGG | - | tig0023390:7881-7900 | Msa1408550:intron | 35.0% | |
| ! | TTTCTGGAAACTTAATCTCG+CGG | - | tig0023390:7920-7939 | Msa1408550:intron | 35.0% |
| ! | GAAAAGGACTTTGAGAAGAT+TGG | - | tig0023390:8434-8453 | Msa1408550:CDS | 35.0% |
| ! | ACTTCTGAAGGATTTCAACA+AGG | - | tig0023390:8514-8533 | Msa1408550:CDS | 35.0% |
| ! | CTTCTGAAGGATTTCAACAA+GGG | - | tig0023390:8515-8534 | Msa1408550:CDS | 35.0% |
| GAGAAGTTCTCTTCTTCATT+TGG | - | tig0023390:8581-8600 | Msa1408550:CDS | 35.0% | |
| ! | CAAGCGTTAATTGAGTGTTG+TGG | + | tig0023390:4663-4682 | None:intergenic | 40.0% |
| CACAACACTCAATTAACGCT+TGG | - | tig0023390:4661-4680 | Msa1408550:three_prime_UTR | 40.0% | |
| GAATGGAAATGTGTGTGTGT+CGG | + | tig0023390:4717-4736 | None:intergenic | 40.0% | |
| GGGATCCATAATTGGAAATG+TGG | + | tig0023390:4781-4800 | None:intergenic | 40.0% | |
| TCGTTAACGGGATCCATAAT+TGG | + | tig0023390:4789-4808 | None:intergenic | 40.0% | |
| TTATGGATCCCGTTAACGAA+TGG | - | tig0023390:4790-4809 | Msa1408550:three_prime_UTR | 40.0% | |
| TATGGATCCCGTTAACGAAT+GGG | - | tig0023390:4791-4810 | Msa1408550:three_prime_UTR | 40.0% | |
| TTGTTACCCCATTCGTTAAC+GGG | + | tig0023390:4801-4820 | None:intergenic | 40.0% | |
| ! | AACGGCAAAGGTTTTCGATT+TGG | + | tig0023390:5022-5041 | None:intergenic | 40.0% |
| CATATCGATCCACAATCTTG+GGG | - | tig0023390:5062-5081 | Msa1408550:CDS | 40.0% | |
| AATCCCATAATCCGATCATG+AGG | + | tig0023390:5152-5171 | None:intergenic | 40.0% | |
| TCATGATCGGATTATGGGAT+TGG | - | tig0023390:5151-5170 | Msa1408550:intron | 40.0% | |
| CATGGTTACTATACTTCTGG+TGG | - | tig0023390:5200-5219 | Msa1408550:intron | 40.0% | |
| ! | CTTTGAGAGTTTGCCGTATA+AGG | - | tig0023390:5250-5269 | Msa1408550:intron | 40.0% |
| GTCGTCGAATTCACCTTATA+CGG | + | tig0023390:5266-5285 | None:intergenic | 40.0% | |
| TATAAGGTGAATTCGACGAC+TGG | - | tig0023390:5266-5285 | Msa1408550:intron | 40.0% | |
| !!! | AGGAGAAAGCGTTGGATTTT+AGG | - | tig0023390:5312-5331 | Msa1408550:intron | 40.0% |
| CGTTTATAATCCCAATCCCT+AGG | + | tig0023390:5371-5390 | None:intergenic | 40.0% | |
| TTTATACCTGAGCAGCAACA+AGG | + | tig0023390:5457-5476 | None:intergenic | 40.0% | |
| CATACTCCCCTCTAAATCAA+CGG | + | tig0023390:5696-5715 | None:intergenic | 40.0% | |
| CCTTTAACAACAGATCCAGA+TGG | + | tig0023390:5798-5817 | None:intergenic | 40.0% | |
| CCATCTGGATCTGTTGTTAA+AGG | - | tig0023390:5795-5814 | Msa1408550:CDS | 40.0% | |
| CTGTTGTTAAAGGTTAAGGG+GGG | - | tig0023390:5805-5824 | Msa1408550:CDS | 40.0% | |
| GAGAGAGAGAGAGAGATAAA+AGG | - | tig0023390:6402-6421 | Msa1408550:intron | 40.0% | |
| ATAGAGAGACGAAGAGAGAA+AGG | - | tig0023390:6429-6448 | Msa1408550:intron | 40.0% | |
| TTAGGGGGATGTATTGGATT+AGG | + | tig0023390:6820-6839 | None:intergenic | 40.0% | |
| !!! | TTTTTTTTTTGTGGTGGCCG+GGG | - | tig0023390:6911-6930 | Msa1408550:intron | 40.0% |
| AAAGCCCATTCATTTGTCTG+GGG | + | tig0023390:6943-6962 | None:intergenic | 40.0% | |
| CATAGCCCAGTTTATAGGTA+AGG | + | tig0023390:7006-7025 | None:intergenic | 40.0% | |
| TAGTTATACTATGGCCCGTT+TGG | + | tig0023390:7278-7297 | None:intergenic | 40.0% | |
| CGGGCCATAGTATAACTATA+AGG | - | tig0023390:7280-7299 | Msa1408550:intron | 40.0% | |
| !! | TTAGCCACCTTGGTAATGTA+AGG | - | tig0023390:7337-7356 | Msa1408550:intron | 40.0% |
| CACAATGTCACAGTACTCAA+AGG | + | tig0023390:7493-7512 | None:intergenic | 40.0% | |
| CAACAACTCACAAGAGTTTG+AGG | - | tig0023390:7517-7536 | Msa1408550:intron | 40.0% | |
| ACAACTCACAAGAGTTTGAG+GGG | - | tig0023390:7519-7538 | Msa1408550:intron | 40.0% | |
| TGGAATGATCTTCTACAGGA+AGG | - | tig0023390:7551-7570 | Msa1408550:intron | 40.0% | |
| GGAATGATCTTCTACAGGAA+GGG | - | tig0023390:7552-7571 | Msa1408550:intron | 40.0% | |
| ATTTCCAATGGCAACTGCAT+TGG | + | tig0023390:7760-7779 | None:intergenic | 40.0% | |
| TGAGAACCATCTTGTGTTGT+GGG | - | tig0023390:7821-7840 | Msa1408550:intron | 40.0% | |
| CTTTACCAGTCAATCCAAGA+GGG | + | tig0023390:7854-7873 | None:intergenic | 40.0% | |
| GATGTTCTTTGCAGGAAACA+AGG | - | tig0023390:7946-7965 | Msa1408550:intron | 40.0% | |
| ! | TGTTGACTGTGATGTTACAG+AGG | + | tig0023390:7988-8007 | None:intergenic | 40.0% |
| ! | TTTTACTCAAGGTAGCTGAC+TGG | - | tig0023390:8365-8384 | Msa1408550:CDS | 40.0% |
| ! | TTCTAGAGGCTTGGTTGAAA+AGG | - | tig0023390:8418-8437 | Msa1408550:CDS | 40.0% |
| TCTTCTTCATTTGGTATGCC+TGG | - | tig0023390:8590-8609 | Msa1408550:CDS | 40.0% | |
| TGTACTTCATCTCAGATACC+AGG | + | tig0023390:8619-8638 | None:intergenic | 40.0% | |
| ! | GGTATCTGAGATGAAGTACA+AGG | - | tig0023390:8619-8638 | Msa1408550:CDS | 40.0% |
| TCAAACTTTGAGTGAGACGT+TGG | + | tig0023390:8665-8684 | None:intergenic | 40.0% | |
| ! | CTCACTCAAAGTTTGAGACA+AGG | - | tig0023390:8669-8688 | Msa1408550:CDS | 40.0% |
| ! | ACTCAAAGTTTGAGACAAGG+TGG | - | tig0023390:8672-8691 | Msa1408550:CDS | 40.0% |
| CATACAAGCCACTTAGCAAA+AGG | + | tig0023390:8859-8878 | None:intergenic | 40.0% | |
| ATGGATCCCGTTAACGAATG+GGG | - | tig0023390:4792-4811 | Msa1408550:three_prime_UTR | 45.0% | |
| ATTCGTTACCGCCGTAGTAA+CGG | + | tig0023390:4992-5011 | None:intergenic | 45.0% | |
| ACGTTAACTCCCCAAGATTG+TGG | + | tig0023390:5074-5093 | None:intergenic | 45.0% | |
| GTTAACGTTCAGCCTTACTC+TGG | - | tig0023390:5086-5105 | Msa1408550:CDS | 45.0% | |
| ATCATGAGGATTAAGCACGG+CGG | + | tig0023390:5138-5157 | None:intergenic | 45.0% | |
| CCGATCATGAGGATTAAGCA+CGG | + | tig0023390:5141-5160 | None:intergenic | 45.0% | |
| CCGTGCTTAATCCTCATGAT+CGG | - | tig0023390:5138-5157 | Msa1408550:CDS | 45.0% | |
| ATGGGATTGGATCTTCCTTC+AGG | - | tig0023390:5164-5183 | Msa1408550:intron | 45.0% | |
| TGAGTCAAATGTCCACCTGA+AGG | + | tig0023390:5182-5201 | None:intergenic | 45.0% | |
| TCAGGTGGACATTTGACTCA+TGG | - | tig0023390:5182-5201 | Msa1408550:intron | 45.0% | |
| TTCTGGTGGGAAGAAGATCT+CGG | - | tig0023390:5214-5233 | Msa1408550:intron | 45.0% | |
| !!! | AAGCGTTGGATTTTAGGCCT+AGG | - | tig0023390:5318-5337 | Msa1408550:intron | 45.0% |
| !! | AGGCCTAGGTTGATTATCTG+TGG | - | tig0023390:5332-5351 | Msa1408550:intron | 45.0% |
| CCACCACAGATAATCAACCT+AGG | + | tig0023390:5338-5357 | None:intergenic | 45.0% | |
| !! | CCTAGGTTGATTATCTGTGG+TGG | - | tig0023390:5335-5354 | Msa1408550:intron | 45.0% |
| TAGTGCTTACCCTAGGGATT+GGG | - | tig0023390:5358-5377 | Msa1408550:intron | 45.0% | |
| AGGGATGTTGCTGATAAGTG+TGG | - | tig0023390:5395-5414 | Msa1408550:intron | 45.0% | |
| ! | AAAGGTTAAGGGGGGTGTAT+TGG | - | tig0023390:5813-5832 | Msa1408550:CDS | 45.0% |
| ! | TAAGGGGGGTGTATTGGATT+AGG | - | tig0023390:5819-5838 | Msa1408550:CDS | 45.0% |
| ACGAAGAGAGAAAGGAGAGA+GGG | - | tig0023390:6437-6456 | Msa1408550:intron | 45.0% | |
| TCGAACCCCAGACAAATGAA+TGG | - | tig0023390:6935-6954 | Msa1408550:intron | 45.0% | |
| CGAACCCCAGACAAATGAAT+GGG | - | tig0023390:6936-6955 | Msa1408550:intron | 45.0% | |
| ! | GGCTTTATAAGCTCCCATCA+TGG | - | tig0023390:6957-6976 | Msa1408550:intron | 45.0% |
| ! | TATTTAGGGCCCGTTTGGAT+TGG | - | tig0023390:7073-7092 | Msa1408550:intron | 45.0% |
| ATACTATGGCCCGTTTGGAT+TGG | + | tig0023390:7273-7292 | None:intergenic | 45.0% | |
| TAGAAGATCATTCCAGCCCT+AGG | + | tig0023390:7546-7565 | None:intergenic | 45.0% | |
| ATTGTGAGGACCACCTTGAA+GGG | + | tig0023390:7658-7677 | None:intergenic | 45.0% | |
| CTGTTTCAAGGCAACAGCAA+GGG | + | tig0023390:7694-7713 | None:intergenic | 45.0% | |
| GGCATATGCCAAGCAAGTTA+AGG | - | tig0023390:7734-7753 | Msa1408550:intron | 45.0% | |
| !! | TGCATTGGCCTTAACTTGCT+TGG | + | tig0023390:7745-7764 | None:intergenic | 45.0% |
| ! | AAGGGATACAGTCTTGTCAC+TGG | - | tig0023390:7792-7811 | Msa1408550:intron | 45.0% |
| CTGAGAACCATCTTGTGTTG+TGG | - | tig0023390:7820-7839 | Msa1408550:intron | 45.0% | |
| GAAGATCCCACAACACAAGA+TGG | + | tig0023390:7830-7849 | None:intergenic | 45.0% | |
| CCTTTACCAGTCAATCCAAG+AGG | + | tig0023390:7855-7874 | None:intergenic | 45.0% | |
| CCTCTTGGATTGACTGGTAA+AGG | - | tig0023390:7852-7871 | Msa1408550:intron | 45.0% | |
| GTTCTTTGCAGGAAACAAGG+TGG | - | tig0023390:7949-7968 | Msa1408550:intron | 45.0% | |
| CTGACTGGAGTTCTGTTAAC+AGG | - | tig0023390:8380-8399 | Msa1408550:CDS | 45.0% | |
| AGTTCTGTTAACAGGTGCTC+CGG | - | tig0023390:8388-8407 | Msa1408550:CDS | 45.0% | |
| ! | AACCAAGCCTCTAGAAGTCA+TGG | + | tig0023390:8414-8433 | None:intergenic | 45.0% |
| ACTCACACTAGAGATCCAGA+AGG | - | tig0023390:8481-8500 | Msa1408550:CDS | 45.0% | |
| ! | GAAGTTTTCCATGCTCCTTC+TGG | + | tig0023390:8499-8518 | None:intergenic | 45.0% |
| GGAGCATGGAAAACTTCTGA+AGG | - | tig0023390:8502-8521 | Msa1408550:CDS | 45.0% | |
| GAAGGATTTCAACAAGGGCT+TGG | - | tig0023390:8520-8539 | Msa1408550:CDS | 45.0% | |
| ATTTGGTATGCCTGGTTTCC+TGG | - | tig0023390:8598-8617 | Msa1408550:CDS | 45.0% | |
| ATCTCAGATACCAGGAAACC+AGG | + | tig0023390:8611-8630 | None:intergenic | 45.0% | |
| GTGAGACGTTGGATTTGAGA+GGG | + | tig0023390:8654-8673 | None:intergenic | 45.0% | |
| AGTGAGACGTTGGATTTGAG+AGG | + | tig0023390:8655-8674 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTTTTTTTTTTTG+TGG | - | tig0023390:6902-6921 | Msa1408550:intron | 5.0% |
| TGTGGCCGTTGCTTAATCGT+TGG | + | tig0023390:4645-4664 | None:intergenic | 50.0% | |
| CGATTAGGTCGTGGATCTCT+GGG | + | tig0023390:4842-4861 | None:intergenic | 50.0% | |
| TCGATTAGGTCGTGGATCTC+TGG | + | tig0023390:4843-4862 | None:intergenic | 50.0% | |
| GAAAAACGTCGTCAATGCCG+CGG | - | tig0023390:4867-4886 | Msa1408550:three_prime_UTR | 50.0% | |
| ATGCGATGAGTTCGATTCCG+CGG | + | tig0023390:4887-4906 | None:intergenic | 50.0% | |
| CGGAATCGAACTCATCGCAT+CGG | - | tig0023390:4887-4906 | Msa1408550:three_prime_UTR | 50.0% | |
| ! | CAAATACTCCGAAGGCATGC+CGG | - | tig0023390:4962-4981 | Msa1408550:CDS | 50.0% |
| ! | AAATACTCCGAAGGCATGCC+GGG | - | tig0023390:4963-4982 | Msa1408550:CDS | 50.0% |
| ATGCCGGGTAACCGTTACTA+CGG | - | tig0023390:4978-4997 | Msa1408550:CDS | 50.0% | |
| ! | AAGCTTGAAGAGCGCGTGAA+CGG | + | tig0023390:5040-5059 | None:intergenic | 50.0% |
| ! | TCAGCCTTACTCTGGTTCAC+CGG | - | tig0023390:5094-5113 | Msa1408550:CDS | 50.0% |
| GTGTAAGCAGCGAAATTCGC+CGG | + | tig0023390:5116-5135 | None:intergenic | 50.0% | |
| GGATTGGATCTTCCTTCAGG+TGG | - | tig0023390:5167-5186 | Msa1408550:intron | 50.0% | |
| ! | TAGGTTGGAGGAGAAAGCGT+TGG | - | tig0023390:5304-5323 | Msa1408550:intron | 50.0% |
| ! | TGGTGGTAGTGCTTACCCTA+GGG | - | tig0023390:5352-5371 | Msa1408550:intron | 50.0% |
| GTAGTGCTTACCCTAGGGAT+TGG | - | tig0023390:5357-5376 | Msa1408550:intron | 50.0% | |
| AGAGAGAGAGAGAGAGAGGA+GGG | - | tig0023390:6356-6375 | Msa1408550:intron | 50.0% | |
| GACGAAGAGAGAAAGGAGAG+AGG | - | tig0023390:6436-6455 | Msa1408550:intron | 50.0% | |
| CGAAGAGAGAAAGGAGAGAG+GGG | - | tig0023390:6438-6457 | Msa1408550:intron | 50.0% | |
| GAAGAGAGAAAGGAGAGAGG+GGG | - | tig0023390:6439-6458 | Msa1408550:intron | 50.0% | |
| AAGAGAGAAAGGAGAGAGGG+GGG | - | tig0023390:6440-6459 | Msa1408550:intron | 50.0% | |
| TCCCATCATGGCTCAATGTG+TGG | - | tig0023390:6969-6988 | Msa1408550:intron | 50.0% | |
| CCCACACATTGAGCCATGAT+GGG | + | tig0023390:6973-6992 | None:intergenic | 50.0% | |
| CCCATCATGGCTCAATGTGT+GGG | - | tig0023390:6970-6989 | Msa1408550:intron | 50.0% | |
| ACCCACACATTGAGCCATGA+TGG | + | tig0023390:6974-6993 | None:intergenic | 50.0% | |
| ACAAGAGTTTGAGGGGTCCT+AGG | - | tig0023390:7526-7545 | Msa1408550:intron | 50.0% | |
| CAAGAGTTTGAGGGGTCCTA+GGG | - | tig0023390:7527-7546 | Msa1408550:intron | 50.0% | |
| GGGCTGGAATGATCTTCTAC+AGG | - | tig0023390:7547-7566 | Msa1408550:intron | 50.0% | |
| GGACCTAAACCACCCAAGAA+GGG | - | tig0023390:7573-7592 | Msa1408550:intron | 50.0% | |
| CGTAAACTGCATTCTCAGGC+TGG | + | tig0023390:7599-7618 | None:intergenic | 50.0% | |
| ! | GCAGTTTTCCCTTCCCTTCA+AGG | - | tig0023390:7642-7661 | Msa1408550:intron | 50.0% |
| ! | GTTTTCCCTTCCCTTCAAGG+TGG | - | tig0023390:7645-7664 | Msa1408550:intron | 50.0% |
| GATTGTGAGGACCACCTTGA+AGG | + | tig0023390:7659-7678 | None:intergenic | 50.0% | |
| GGTCCTCACAATCACCAGAT+TGG | - | tig0023390:7666-7685 | Msa1408550:intron | 50.0% | |
| GCACCAATCTGGTGATTGTG+AGG | + | tig0023390:7672-7691 | None:intergenic | 50.0% | |
| CCTGTTTCAAGGCAACAGCA+AGG | + | tig0023390:7695-7714 | None:intergenic | 50.0% | |
| !! | CCTTGCTGTTGCCTTGAAAC+AGG | - | tig0023390:7692-7711 | Msa1408550:intron | 50.0% |
| AGGTGACATGGCCTGTTTCA+AGG | + | tig0023390:7706-7725 | None:intergenic | 50.0% | |
| TTGAAACAGGCCATGTCACC+TGG | - | tig0023390:7705-7724 | Msa1408550:intron | 50.0% | |
| TGAAACAGGCCATGTCACCT+GGG | - | tig0023390:7706-7725 | Msa1408550:intron | 50.0% | |
| TTGGCATATGCCTTGAACCC+AGG | + | tig0023390:7726-7745 | None:intergenic | 50.0% | |
| AAGGCCAATGCAGTTGCCAT+TGG | - | tig0023390:7753-7772 | Msa1408550:intron | 50.0% | |
| ! | GGATACAGTCTTGTCACTGG+TGG | - | tig0023390:7795-7814 | Msa1408550:intron | 50.0% |
| CGCGGTTTGATGTTCTTTGC+AGG | - | tig0023390:7938-7957 | Msa1408550:intron | 50.0% | |
| ! | TTTTGGCGATAGCAGTGCCT+TGG | - | tig0023390:8018-8037 | Msa1408550:intron | 50.0% |
| TTACCAACTCGTACTCCTCC+TGG | + | tig0023390:8046-8065 | None:intergenic | 50.0% | |
| ! | AAGCCTCTAGAAGTCATGGC+CGG | + | tig0023390:8410-8429 | None:intergenic | 50.0% |
| CTAGTGTGAGTGTCACAGCA+CGG | + | tig0023390:8472-8491 | None:intergenic | 50.0% | |
| CTAGAGATCCAGAAGGAGCA+TGG | - | tig0023390:8488-8507 | Msa1408550:CDS | 50.0% | |
| GGATTTCAACAAGGGCTTGG+TGG | - | tig0023390:8523-8542 | Msa1408550:CDS | 50.0% | |
| TTCGCCGTCATCGAAGCTCT+CGG | - | tig0023390:4924-4943 | Msa1408550:CDS | 55.0% | |
| ACTGCCGAGAGCTTCGATGA+CGG | + | tig0023390:4931-4950 | None:intergenic | 55.0% | |
| TTCGCCGGTGAACCAGAGTA+AGG | + | tig0023390:5101-5120 | None:intergenic | 55.0% | |
| ! | GTGGTGGTAGTGCTTACCCT+AGG | - | tig0023390:5351-5370 | Msa1408550:intron | 55.0% |
| !! | TAGTGGCCTTGTTGCTGCTC+AGG | - | tig0023390:5448-5467 | Msa1408550:intron | 55.0% |
| GGTGAGAGAGAGAGAGAGAG+AGG | - | tig0023390:6352-6371 | Msa1408550:intron | 55.0% | |
| GAGAGAGAGAGAGAGAGAGG+AGG | - | tig0023390:6355-6374 | Msa1408550:intron | 55.0% | |
| ! | TTTGTCTGGGGTTCGAACCC+CGG | + | tig0023390:6931-6950 | None:intergenic | 55.0% |
| GGGACCTAAACCACCCAAGA+AGG | - | tig0023390:7572-7591 | Msa1408550:intron | 55.0% | |
| TGGCCCTTCTTGGGTGGTTT+AGG | + | tig0023390:7579-7598 | None:intergenic | 55.0% | |
| ! | TTCTCAGGCTGGCCCTTCTT+GGG | + | tig0023390:7588-7607 | None:intergenic | 55.0% |
| ! | ATTCTCAGGCTGGCCCTTCT+TGG | + | tig0023390:7589-7608 | None:intergenic | 55.0% |
| GAGGACCACCTTGAAGGGAA+GGG | + | tig0023390:7653-7672 | None:intergenic | 55.0% | |
| TGAGGACCACCTTGAAGGGA+AGG | + | tig0023390:7654-7673 | None:intergenic | 55.0% | |
| !! | CAACAGCAAGGGCACCAATC+TGG | + | tig0023390:7683-7702 | None:intergenic | 55.0% |
| TGCCTTGAACCCAGGTGACA+TGG | + | tig0023390:7718-7737 | None:intergenic | 55.0% | |
| TTGTGGGATCTTCGCCCTCT+TGG | - | tig0023390:7837-7856 | Msa1408550:intron | 55.0% | |
| CTTCGCCCTCTTGGATTGAC+TGG | - | tig0023390:7846-7865 | Msa1408550:intron | 55.0% | |
| ! | GGCCATGACTTCTAGAGGCT+TGG | - | tig0023390:8409-8428 | Msa1408550:CDS | 55.0% |
| TGAGTGTCACAGCACGGTGA+AGG | + | tig0023390:8466-8485 | None:intergenic | 55.0% | |
| !! | CAAGGGCTTGGTGGACAACA+AGG | - | tig0023390:8532-8551 | Msa1408550:CDS | 55.0% |
| TCTGGGTCGACGGTTACGAG+TGG | + | tig0023390:4825-4844 | None:intergenic | 60.0% | |
| GTCGTGGATCTCTGGGTCGA+CGG | + | tig0023390:4835-4854 | None:intergenic | 60.0% | |
| ! | GAGAGCTTCGATGACGGCGA+AGG | + | tig0023390:4925-4944 | None:intergenic | 60.0% |
| ACGGTTACCCGGCATGCCTT+CGG | + | tig0023390:4973-4992 | None:intergenic | 60.0% | |
| CCGCCGTAGTAACGGTTACC+CGG | + | tig0023390:4984-5003 | None:intergenic | 60.0% | |
| CCGGGTAACCGTTACTACGG+CGG | - | tig0023390:4981-5000 | Msa1408550:CDS | 60.0% | |
| ! | GAAGAGCGCGTGAACGGCAA+AGG | + | tig0023390:5034-5053 | None:intergenic | 60.0% |
| AGAGAAAGGAGAGAGGGGGG+AGG | - | tig0023390:6443-6462 | Msa1408550:intron | 60.0% | |
| GAGAAAGGAGAGAGGGGGGA+GGG | - | tig0023390:6444-6463 | Msa1408550:intron | 60.0% | |
| AGAAAGGAGAGAGGGGGGAG+GGG | - | tig0023390:6445-6464 | Msa1408550:intron | 60.0% | |
| AGTTTGAGGGGTCCTAGGGC+TGG | - | tig0023390:7531-7550 | Msa1408550:intron | 60.0% | |
| GGCCATGTCACCTGGGTTCA+AGG | - | tig0023390:7713-7732 | Msa1408550:intron | 60.0% | |
| GATAGCAGTGCCTTGGCTCC+AGG | - | tig0023390:8025-8044 | Msa1408550:intron | 60.0% | |
| TCGTACTCCTCCTGGAGCCA+AGG | + | tig0023390:8038-8057 | None:intergenic | 60.0% | |
| ! | GCTCCAGGAGGAGTACGAGT+TGG | - | tig0023390:8040-8059 | Msa1408550:intron | 60.0% |
| GCTCCGGCCATGACTTCTAG+AGG | - | tig0023390:8404-8423 | Msa1408550:CDS | 60.0% | |
| ! | TCAGGCTGGCCCTTCTTGGG+TGG | + | tig0023390:7585-7604 | None:intergenic | 65.0% |
| AGCAGTGCCTTGGCTCCAGG+AGG | - | tig0023390:8028-8047 | Msa1408550:intron | 65.0% | |
| AGAGAGGGGGGAGGGGAGAG+AGG | - | tig0023390:6452-6471 | Msa1408550:intron | 70.0% | |
| GAGAGGGGGGAGGGGAGAGA+GGG | - | tig0023390:6453-6472 | Msa1408550:intron | 70.0% | |
| AGAGGGGGGAGGGGAGAGAG+GGG | - | tig0023390:6454-6473 | Msa1408550:intron | 70.0% | |
| GAGGGGGGAGGGGAGAGAGG+GGG | - | tig0023390:6455-6474 | Msa1408550:intron | 75.0% | |
| AGGGGGGAGGGGAGAGAGGG+GGG | - | tig0023390:6456-6475 | Msa1408550:intron | 75.0% | |
| GGGAGGGGAGAGAGGGGGGA+GGG | - | tig0023390:6460-6479 | Msa1408550:intron | 75.0% | |
| ! | GGGGAGGGGAGAGAGGGGGG+AGG | - | tig0023390:6459-6478 | Msa1408550:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023390 | gene | 4587 | 8974 | 4587 | ID=Msa1408550;Name=Msa1408550 |
| tig0023390 | mRNA | 4587 | 8974 | 4587 | ID=Msa1408550-mRNA-1;Parent=Msa1408550;Name=Msa1408550-mRNA-1;_AED=0.01;_eAED=0.01;_QI=205|1|1|1|1|1|4|328|471 |
| tig0023390 | exon | 4587 | 5159 | 4587 | ID=Msa1408550-mRNA-1:exon:25627;Parent=Msa1408550-mRNA-1 |
| tig0023390 | exon | 5500 | 5601 | 5500 | ID=Msa1408550-mRNA-1:exon:25626;Parent=Msa1408550-mRNA-1 |
| tig0023390 | exon | 5694 | 6084 | 5694 | ID=Msa1408550-mRNA-1:exon:25625;Parent=Msa1408550-mRNA-1 |
| tig0023390 | exon | 8092 | 8974 | 8092 | ID=Msa1408550-mRNA-1:exon:25624;Parent=Msa1408550-mRNA-1 |
| tig0023390 | five_prime_UTR | 8770 | 8974 | 8770 | ID=Msa1408550-mRNA-1:five_prime_utr;Parent=Msa1408550-mRNA-1 |
| tig0023390 | CDS | 8092 | 8769 | 8092 | ID=Msa1408550-mRNA-1:cds;Parent=Msa1408550-mRNA-1 |
| tig0023390 | CDS | 5694 | 6084 | 5694 | ID=Msa1408550-mRNA-1:cds;Parent=Msa1408550-mRNA-1 |
| tig0023390 | CDS | 5500 | 5601 | 5500 | ID=Msa1408550-mRNA-1:cds;Parent=Msa1408550-mRNA-1 |
| tig0023390 | CDS | 4915 | 5159 | 4915 | ID=Msa1408550-mRNA-1:cds;Parent=Msa1408550-mRNA-1 |
| tig0023390 | three_prime_UTR | 4587 | 4914 | 4587 | ID=Msa1408550-mRNA-1:three_prime_utr;Parent=Msa1408550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
