Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700790 | XP_003629706.1 | 97.912 | 479 | 10 | 0 | 1 | 479 | 1 | 479 | 0.0 | 943 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700790 | sp|Q9LHN7|PHSC_ARATH | 60.768 | 469 | 179 | 2 | 11 | 479 | 4 | 467 | 0.0 | 574 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700790 | G7LHY8 | 97.912 | 479 | 10 | 0 | 1 | 479 | 1 | 479 | 0.0 | 943 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0617850 | Msa0700790 | 0.864231 | 1.410562e-64 | -8.615850e-47 |
| Msa0656660 | Msa0700790 | 0.997458 | 6.760083e-243 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700790 | MtrunA17_Chr8g0378551 | 97.912 | 479 | 10 | 0 | 1 | 479 | 1 | 479 | 0.0 | 943 |
| Msa0700790 | MtrunA17_Chr5g0426641 | 64.494 | 445 | 153 | 1 | 35 | 479 | 20 | 459 | 0.0 | 583 |
| Msa0700790 | MtrunA17_Chr1g0211371 | 48.222 | 450 | 230 | 2 | 26 | 475 | 12 | 458 | 2.06e-151 | 439 |
| Msa0700790 | MtrunA17_Chr3g0094551 | 48.299 | 441 | 225 | 2 | 38 | 478 | 17 | 454 | 2.07e-150 | 437 |
| Msa0700790 | MtrunA17_Chr5g0409251 | 47.619 | 441 | 229 | 2 | 28 | 468 | 18 | 456 | 3.35e-149 | 434 |
| Msa0700790 | MtrunA17_Chr5g0393681 | 48.630 | 438 | 221 | 3 | 33 | 469 | 3 | 437 | 1.73e-133 | 394 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0700790 | AT3G13620.1 | 60.768 | 469 | 179 | 2 | 11 | 479 | 4 | 467 | 0.0 | 574 |
| Msa0700790 | AT1G31830.1 | 48.451 | 452 | 230 | 2 | 28 | 479 | 37 | 485 | 3.56e-158 | 458 |
| Msa0700790 | AT1G31830.2 | 48.451 | 452 | 230 | 2 | 28 | 479 | 21 | 469 | 4.98e-158 | 457 |
| Msa0700790 | AT5G05630.1 | 47.193 | 481 | 240 | 4 | 1 | 468 | 1 | 480 | 6.51e-156 | 452 |
| Msa0700790 | AT1G31820.1 | 49.451 | 455 | 220 | 3 | 34 | 481 | 30 | 481 | 3.56e-153 | 445 |
| Msa0700790 | AT3G19553.1 | 51.836 | 463 | 210 | 5 | 27 | 479 | 9 | 468 | 3.64e-149 | 434 |
Find 83 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATGGTGGGTTTGTTATT+TGG | 0.119761 | 4_4:-71961285 | Msa0700790:CDS |
| AGTACTTTCTTAACATTCTT+AGG | 0.151243 | 4_4:-71960260 | Msa0700790:CDS |
| CTCATCTACTTTGAGGTATC+TGG | 0.167645 | 4_4:-71961442 | Msa0700790:CDS |
| TCTGGAATACTCCAAATAAA+TGG | 0.207381 | 4_4:+71961346 | None:intergenic |
| CTGGGAATTGGTTGAAATAT+TGG | 0.212399 | 4_4:-71960691 | Msa0700790:CDS |
| AAGGTTCCACTTGGATTCTT+TGG | 0.223454 | 4_4:-71960362 | Msa0700790:CDS |
| ACTAGCCACAAATACAATTT+TGG | 0.228986 | 4_4:+71960280 | None:intergenic |
| TGCTGGATTGTTAACTTGTT+TGG | 0.231778 | 4_4:-71960810 | Msa0700790:CDS |
| TTGGATCTTCTTCTTCTCTT+TGG | 0.233772 | 4_4:+71961515 | None:intergenic |
| ACATTAACACAAAGGGTAAA+AGG | 0.251018 | 4_4:+71961017 | None:intergenic |
| AAATGGTGGGTTTGTTATTT+GGG | 0.257640 | 4_4:-71961284 | Msa0700790:CDS |
| CCAGCAAATAACAAAGCTTT+TGG | 0.261342 | 4_4:+71960827 | None:intergenic |
| TTGAAATATTGGATGGAAAT+TGG | 0.269249 | 4_4:-71960680 | Msa0700790:CDS |
| GGTTATACTGCAGTTGGTTT+AGG | 0.285281 | 4_4:-71961049 | Msa0700790:CDS |
| CCAAAAGCTTTGTTATTTGC+TGG | 0.287356 | 4_4:-71960827 | Msa0700790:CDS |
| ATTTGGGCTAATGAAGCTTT+TGG | 0.289227 | 4_4:-71961268 | Msa0700790:CDS |
| TACAATGAAAAGACCTTATA+AGG | 0.296408 | 4_4:-71960381 | Msa0700790:CDS |
| AATCCAAGTGGAACCTTATA+AGG | 0.306194 | 4_4:+71960368 | None:intergenic |
| TGCCACTTGATCAAGAAGTT+TGG | 0.318408 | 4_4:-71960751 | Msa0700790:CDS |
| CTGGTTTGATTGCTGGGAAT+TGG | 0.320667 | 4_4:-71960703 | Msa0700790:CDS |
| GGGTTATATAATTCCTTTGT+TGG | 0.320719 | 4_4:-71960789 | Msa0700790:CDS |
| CAATGGAGTAGGAGATAAAT+TGG | 0.322700 | 4_4:-71960183 | Msa0700790:CDS |
| AGATAATCTATACATAGAAT+TGG | 0.327996 | 4_4:+71961178 | None:intergenic |
| CCTAGTAGATGGTTAAGTTT+AGG | 0.331119 | 4_4:-71960968 | Msa0700790:CDS |
| GCCACTTGATCAAGAAGTTT+GGG | 0.332993 | 4_4:-71960750 | Msa0700790:CDS |
| CATGTGGCTGGTTTGATTGC+TGG | 0.333123 | 4_4:-71960710 | Msa0700790:CDS |
| GTATAGTTTAGGGATGCTTT+TGG | 0.333266 | 4_4:-71960441 | Msa0700790:CDS |
| GCTGGATTGTTAACTTGTTT+GGG | 0.336043 | 4_4:-71960809 | Msa0700790:CDS |
| AATCTTTCTCATCTACTTTG+AGG | 0.359694 | 4_4:-71961449 | Msa0700790:CDS |
| TAAACCAGAATAATTCAAAA+AGG | 0.378273 | 4_4:+71961081 | None:intergenic |
| GAGGTATCTGGTGGACCTTA+TGG | 0.387052 | 4_4:-71961430 | Msa0700790:CDS |
| ATTCCTTTGTTGGCTACTAC+TGG | 0.396954 | 4_4:-71960779 | Msa0700790:CDS |
| TGGTTTGATTGTAATGTGTT+TGG | 0.404951 | 4_4:-71960342 | Msa0700790:CDS |
| TGCTACCAAAATTGTATTTG+TGG | 0.406271 | 4_4:-71960285 | Msa0700790:CDS |
| ATAACAAACCCACCATTTCC+AGG | 0.406978 | 4_4:+71961289 | None:intergenic |
| GTTTAGAAGATGTTGATGAT+AGG | 0.416793 | 4_4:+71961537 | None:intergenic |
| ATGTGGCTGGTTTGATTGCT+GGG | 0.424967 | 4_4:-71960709 | Msa0700790:CDS |
| GTACTTTCTTAACATTCTTA+GGG | 0.425423 | 4_4:-71960259 | Msa0700790:CDS |
| TATTCTGGTTTAGCTATAGT+TGG | 0.426561 | 4_4:-71961070 | Msa0700790:CDS |
| TTGCTTCTTTCCTTAAATTG+AGG | 0.438535 | 4_4:-71960415 | Msa0700790:CDS |
| CTGGAATACTCCAAATAAAT+GGG | 0.440921 | 4_4:+71961347 | None:intergenic |
| ACTGTTGCTTCTTCACCATA+AGG | 0.446104 | 4_4:+71961415 | None:intergenic |
| TCTGCAGTTAAAAGAGCCTC+TGG | 0.446328 | 4_4:+71961328 | None:intergenic |
| GCTACAACATTCCCTGGAAA+TGG | 0.446788 | 4_4:-71961301 | Msa0700790:CDS |
| AAGTAGATGAGAAAGATTAG+AGG | 0.454596 | 4_4:+71961454 | None:intergenic |
| TGAATCTTTGTAAGTCTAAG+AGG | 0.460463 | 4_4:-71960217 | Msa0700790:CDS |
| CTAAAATTGATCCTAGTAGA+TGG | 0.462759 | 4_4:-71960979 | Msa0700790:CDS |
| GATAATCTATACATAGAATT+GGG | 0.465775 | 4_4:+71961179 | None:intergenic |
| CATTAACACAAAGGGTAAAA+GGG | 0.478523 | 4_4:+71961018 | None:intergenic |
| CCTAAACTTAACCATCTACT+AGG | 0.478755 | 4_4:+71960968 | None:intergenic |
| TTTGGTTCCATCTGTGCTGT+TGG | 0.480095 | 4_4:-71960324 | Msa0700790:CDS |
| ATGGTTAAGTTTAGGACAAG+AGG | 0.482198 | 4_4:-71960960 | Msa0700790:CDS |
| ATCAAAGACATTAACACAAA+GGG | 0.485844 | 4_4:+71961010 | None:intergenic |
| ATCAAGAAGTTTGGGTTGGT+GGG | 0.495054 | 4_4:-71960742 | Msa0700790:CDS |
| GATCAAGAAGTTTGGGTTGG+TGG | 0.497496 | 4_4:-71960743 | Msa0700790:CDS |
| GGTAAACCTGAAGACAAAAC+AGG | 0.502863 | 4_4:+71961142 | None:intergenic |
| ATAGTTGGTTATACTGCAGT+TGG | 0.509080 | 4_4:-71961055 | Msa0700790:CDS |
| GAAGCAACAGTAAGTGCTGC+AGG | 0.513783 | 4_4:-71961403 | Msa0700790:CDS |
| AGTAGATGAGAAAGATTAGA+GGG | 0.514522 | 4_4:+71961455 | None:intergenic |
| TGGTTAAGTTTAGGACAAGA+GGG | 0.515356 | 4_4:-71960959 | Msa0700790:CDS |
| GTGGTTTAACACACCTTGGA+TGG | 0.518671 | 4_4:-71960543 | Msa0700790:CDS |
| AGACCTTATAAGGTTCCACT+TGG | 0.526727 | 4_4:-71960371 | Msa0700790:CDS |
| GAATTAGCTACAACATTCCC+TGG | 0.531597 | 4_4:-71961307 | Msa0700790:CDS |
| ACATAAACCAACAGCACAGA+TGG | 0.538480 | 4_4:+71960317 | None:intergenic |
| CTTGATCAAGAAGTTTGGGT+TGG | 0.540498 | 4_4:-71960746 | Msa0700790:CDS |
| TGGATTGAATTCAATGGAGT+AGG | 0.540871 | 4_4:-71960194 | Msa0700790:CDS |
| AAGAGGTGGATTGAATTCAA+TGG | 0.542090 | 4_4:-71960200 | Msa0700790:CDS |
| CAAAGTGGTTTAACACACCT+TGG | 0.542336 | 4_4:-71960547 | Msa0700790:CDS |
| ATCTACTTTGAGGTATCTGG+TGG | 0.545094 | 4_4:-71961439 | Msa0700790:CDS |
| AAGTTTAGGACAAGAGGGTG+TGG | 0.548272 | 4_4:-71960954 | Msa0700790:CDS |
| ACCCAAACTTCTTGATCAAG+TGG | 0.548962 | 4_4:+71960749 | None:intergenic |
| ACAACATTCCCTGGAAATGG+TGG | 0.555951 | 4_4:-71961298 | Msa0700790:CDS |
| TAACAAACCCACCATTTCCA+GGG | 0.582040 | 4_4:+71961290 | None:intergenic |
| GAAATCAAAATTGCCATCCA+AGG | 0.585439 | 4_4:+71960530 | None:intergenic |
| GATAGTGCTAGTACTCTAGC+TGG | 0.592034 | 4_4:-71960878 | Msa0700790:CDS |
| GAATTGGTTGAAATATTGGA+TGG | 0.593097 | 4_4:-71960687 | Msa0700790:CDS |
| CAACATTCCCTGGAAATGGT+GGG | 0.601942 | 4_4:-71961297 | Msa0700790:CDS |
| ATCAAACCAAAGAATCCAAG+TGG | 0.609635 | 4_4:+71960356 | None:intergenic |
| ATCTTTGTAAGTCTAAGAGG+TGG | 0.616056 | 4_4:-71960214 | Msa0700790:CDS |
| ATTTATTTGGAGTATTCCAG+AGG | 0.619283 | 4_4:-71961344 | Msa0700790:CDS |
| AATCAAAGACATTAACACAA+AGG | 0.628722 | 4_4:+71961009 | None:intergenic |
| TATTTGGTGAAAGGTCAAAG+TGG | 0.630257 | 4_4:-71960562 | Msa0700790:CDS |
| GCACCAGTAGTAGCCAACAA+AGG | 0.678385 | 4_4:+71960776 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTTTTGTATAGTTTA+GGG | - | chr4_4:71961289-71961308 | Msa0700790:CDS | 10.0% |
| !!! | TTAATTTTTTGTATAGTTTA+GGG | - | chr4_4:71961289-71961308 | Msa0700790:CDS | 10.0% |
| !!! | TTATAATTTTCCCATTTATT+TGG | - | chr4_4:71960383-71960402 | Msa0700790:CDS | 15.0% |
| !!! | GTTAATTTTTTGTATAGTTT+AGG | - | chr4_4:71961288-71961307 | Msa0700790:CDS | 15.0% |
| !!! | TTATAATTTTCCCATTTATT+TGG | - | chr4_4:71960383-71960402 | Msa0700790:CDS | 15.0% |
| !!! | GTTAATTTTTTGTATAGTTT+AGG | - | chr4_4:71961288-71961307 | Msa0700790:CDS | 15.0% |
| !!! | TTTTTTTTGTGATTTGGTTT+TGG | + | chr4_4:71960254-71960273 | None:intergenic | 20.0% |
| !! | GATAATCTATACATAGAATT+GGG | + | chr4_4:71960564-71960583 | None:intergenic | 20.0% |
| !! | AGATAATCTATACATAGAAT+TGG | + | chr4_4:71960565-71960584 | None:intergenic | 20.0% |
| !! | TAAACCAGAATAATTCAAAA+AGG | + | chr4_4:71960662-71960681 | None:intergenic | 20.0% |
| !!! | TTTTTTGGAACTTGAATTTT+TGG | - | chr4_4:71960839-71960858 | Msa0700790:CDS | 20.0% |
| !!! | TTTTTGGAACTTGAATTTTT+GGG | - | chr4_4:71960840-71960859 | Msa0700790:CDS | 20.0% |
| !! | TGTAAAACTAAAAAAAGACA+TGG | + | chr4_4:71961253-71961272 | None:intergenic | 20.0% |
| !! | ACTATACAAAAAATTAACAG+TGG | + | chr4_4:71961286-71961305 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGTGATTTGGTTT+TGG | + | chr4_4:71960254-71960273 | None:intergenic | 20.0% |
| !! | GATAATCTATACATAGAATT+GGG | + | chr4_4:71960564-71960583 | None:intergenic | 20.0% |
| !! | AGATAATCTATACATAGAAT+TGG | + | chr4_4:71960565-71960584 | None:intergenic | 20.0% |
| !! | TAAACCAGAATAATTCAAAA+AGG | + | chr4_4:71960662-71960681 | None:intergenic | 20.0% |
| !!! | TTTTTTGGAACTTGAATTTT+TGG | - | chr4_4:71960839-71960858 | Msa0700790:CDS | 20.0% |
| !!! | TTTTTGGAACTTGAATTTTT+GGG | - | chr4_4:71960840-71960859 | Msa0700790:CDS | 20.0% |
| !! | TGTAAAACTAAAAAAAGACA+TGG | + | chr4_4:71961253-71961272 | None:intergenic | 20.0% |
| !! | ACTATACAAAAAATTAACAG+TGG | + | chr4_4:71961286-71961305 | None:intergenic | 20.0% |
| !!! | TGCTAGTTTTTTTTGTGATT+TGG | + | chr4_4:71960260-71960279 | None:intergenic | 25.0% |
| !! | TTGTCCTTTTTGAATTATTC+TGG | - | chr4_4:71960655-71960674 | Msa0700790:CDS | 25.0% |
| ! | ATCAAAGACATTAACACAAA+GGG | + | chr4_4:71960733-71960752 | None:intergenic | 25.0% |
| ! | AATCAAAGACATTAACACAA+AGG | + | chr4_4:71960734-71960753 | None:intergenic | 25.0% |
| ! | TTGAAATATTGGATGGAAAT+TGG | - | chr4_4:71961060-71961079 | Msa0700790:CDS | 25.0% |
| ! | GGATTCATACCAAAAATATT+TGG | - | chr4_4:71961162-71961181 | Msa0700790:CDS | 25.0% |
| !! | TACCAAAAATATTTGGTGAA+AGG | - | chr4_4:71961169-71961188 | Msa0700790:CDS | 25.0% |
| !!! | GGAATTTTTTCCTCAATTTA+AGG | + | chr4_4:71961338-71961357 | None:intergenic | 25.0% |
| !! | TATAAGGTCTTTTCATTGTA+GGG | + | chr4_4:71961359-71961378 | None:intergenic | 25.0% |
| !! | TTATAAGGTCTTTTCATTGT+AGG | + | chr4_4:71961360-71961379 | None:intergenic | 25.0% |
| ! | TACAATGAAAAGACCTTATA+AGG | - | chr4_4:71961359-71961378 | Msa0700790:CDS | 25.0% |
| ! | AGTACTTTCTTAACATTCTT+AGG | - | chr4_4:71961480-71961499 | Msa0700790:CDS | 25.0% |
| ! | GTACTTTCTTAACATTCTTA+GGG | - | chr4_4:71961481-71961500 | Msa0700790:CDS | 25.0% |
| !!! | TGCTAGTTTTTTTTGTGATT+TGG | + | chr4_4:71960260-71960279 | None:intergenic | 25.0% |
| !! | TTGTCCTTTTTGAATTATTC+TGG | - | chr4_4:71960655-71960674 | Msa0700790:CDS | 25.0% |
| ! | ATCAAAGACATTAACACAAA+GGG | + | chr4_4:71960733-71960752 | None:intergenic | 25.0% |
| ! | AATCAAAGACATTAACACAA+AGG | + | chr4_4:71960734-71960753 | None:intergenic | 25.0% |
| ! | TTGAAATATTGGATGGAAAT+TGG | - | chr4_4:71961060-71961079 | Msa0700790:CDS | 25.0% |
| ! | GGATTCATACCAAAAATATT+TGG | - | chr4_4:71961162-71961181 | Msa0700790:CDS | 25.0% |
| !! | TACCAAAAATATTTGGTGAA+AGG | - | chr4_4:71961169-71961188 | Msa0700790:CDS | 25.0% |
| !!! | GGAATTTTTTCCTCAATTTA+AGG | + | chr4_4:71961338-71961357 | None:intergenic | 25.0% |
| !! | TATAAGGTCTTTTCATTGTA+GGG | + | chr4_4:71961359-71961378 | None:intergenic | 25.0% |
| !! | TTATAAGGTCTTTTCATTGT+AGG | + | chr4_4:71961360-71961379 | None:intergenic | 25.0% |
| ! | TACAATGAAAAGACCTTATA+AGG | - | chr4_4:71961359-71961378 | Msa0700790:CDS | 25.0% |
| ! | AGTACTTTCTTAACATTCTT+AGG | - | chr4_4:71961480-71961499 | Msa0700790:CDS | 25.0% |
| ! | GTACTTTCTTAACATTCTTA+GGG | - | chr4_4:71961481-71961500 | Msa0700790:CDS | 25.0% |
| !! | GTTTAGAAGATGTTGATGAT+AGG | + | chr4_4:71960206-71960225 | None:intergenic | 30.0% |
| AGTAGATGAGAAAGATTAGA+GGG | + | chr4_4:71960288-71960307 | None:intergenic | 30.0% | |
| AAGTAGATGAGAAAGATTAG+AGG | + | chr4_4:71960289-71960308 | None:intergenic | 30.0% | |
| AATCTTTCTCATCTACTTTG+AGG | - | chr4_4:71960291-71960310 | Msa0700790:CDS | 30.0% | |
| AATCCAAGAATTGCAAAAAG+TGG | + | chr4_4:71960364-71960383 | None:intergenic | 30.0% | |
| CTGGAATACTCCAAATAAAT+GGG | + | chr4_4:71960396-71960415 | None:intergenic | 30.0% | |
| ! | TCTGGAATACTCCAAATAAA+TGG | + | chr4_4:71960397-71960416 | None:intergenic | 30.0% |
| ! | ATTTATTTGGAGTATTCCAG+AGG | - | chr4_4:71960396-71960415 | Msa0700790:CDS | 30.0% |
| !! | AAATGGTGGGTTTGTTATTT+GGG | - | chr4_4:71960456-71960475 | Msa0700790:CDS | 30.0% |
| ! | GGATATTGGAAATTCTTTTG+TGG | - | chr4_4:71960517-71960536 | Msa0700790:CDS | 30.0% |
| ACAAAAATAGACACAATACG+AGG | + | chr4_4:71960622-71960641 | None:intergenic | 30.0% | |
| !! | TATTCTGGTTTAGCTATAGT+TGG | - | chr4_4:71960670-71960689 | Msa0700790:CDS | 30.0% |
| CATTAACACAAAGGGTAAAA+GGG | + | chr4_4:71960725-71960744 | None:intergenic | 30.0% | |
| ACATTAACACAAAGGGTAAA+AGG | + | chr4_4:71960726-71960745 | None:intergenic | 30.0% | |
| ! | CATCTACTAGGATCAATTTT+AGG | + | chr4_4:71960763-71960782 | None:intergenic | 30.0% |
| CTAAAATTGATCCTAGTAGA+TGG | - | chr4_4:71960761-71960780 | Msa0700790:CDS | 30.0% | |
| !! | GCTTTTGGAAAAGTTTTATG+TGG | + | chr4_4:71960901-71960920 | None:intergenic | 30.0% |
| GGGTTATATAATTCCTTTGT+TGG | - | chr4_4:71960951-71960970 | Msa0700790:CDS | 30.0% | |
| GAATTGGTTGAAATATTGGA+TGG | - | chr4_4:71961053-71961072 | Msa0700790:CDS | 30.0% | |
| ! | GACCTTTCACCAAATATTTT+TGG | + | chr4_4:71961174-71961193 | None:intergenic | 30.0% |
| TTGCTTCTTTCCTTAAATTG+AGG | - | chr4_4:71961325-71961344 | Msa0700790:CDS | 30.0% | |
| TGGTTTGATTGTAATGTGTT+TGG | - | chr4_4:71961398-71961417 | Msa0700790:CDS | 30.0% | |
| TGCTACCAAAATTGTATTTG+TGG | - | chr4_4:71961455-71961474 | Msa0700790:CDS | 30.0% | |
| ! | ACTAGCCACAAATACAATTT+TGG | + | chr4_4:71961463-71961482 | None:intergenic | 30.0% |
| TGAATCTTTGTAAGTCTAAG+AGG | - | chr4_4:71961523-71961542 | Msa0700790:CDS | 30.0% | |
| !! | GTTTAGAAGATGTTGATGAT+AGG | + | chr4_4:71960206-71960225 | None:intergenic | 30.0% |
| AGTAGATGAGAAAGATTAGA+GGG | + | chr4_4:71960288-71960307 | None:intergenic | 30.0% | |
| AAGTAGATGAGAAAGATTAG+AGG | + | chr4_4:71960289-71960308 | None:intergenic | 30.0% | |
| AATCTTTCTCATCTACTTTG+AGG | - | chr4_4:71960291-71960310 | Msa0700790:CDS | 30.0% | |
| AATCCAAGAATTGCAAAAAG+TGG | + | chr4_4:71960364-71960383 | None:intergenic | 30.0% | |
| CTGGAATACTCCAAATAAAT+GGG | + | chr4_4:71960396-71960415 | None:intergenic | 30.0% | |
| ! | TCTGGAATACTCCAAATAAA+TGG | + | chr4_4:71960397-71960416 | None:intergenic | 30.0% |
| ! | ATTTATTTGGAGTATTCCAG+AGG | - | chr4_4:71960396-71960415 | Msa0700790:CDS | 30.0% |
| !! | AAATGGTGGGTTTGTTATTT+GGG | - | chr4_4:71960456-71960475 | Msa0700790:CDS | 30.0% |
| ! | GGATATTGGAAATTCTTTTG+TGG | - | chr4_4:71960517-71960536 | Msa0700790:CDS | 30.0% |
| ACAAAAATAGACACAATACG+AGG | + | chr4_4:71960622-71960641 | None:intergenic | 30.0% | |
| !! | TATTCTGGTTTAGCTATAGT+TGG | - | chr4_4:71960670-71960689 | Msa0700790:CDS | 30.0% |
| CATTAACACAAAGGGTAAAA+GGG | + | chr4_4:71960725-71960744 | None:intergenic | 30.0% | |
| ACATTAACACAAAGGGTAAA+AGG | + | chr4_4:71960726-71960745 | None:intergenic | 30.0% | |
| ! | CATCTACTAGGATCAATTTT+AGG | + | chr4_4:71960763-71960782 | None:intergenic | 30.0% |
| CTAAAATTGATCCTAGTAGA+TGG | - | chr4_4:71960761-71960780 | Msa0700790:CDS | 30.0% | |
| !! | GCTTTTGGAAAAGTTTTATG+TGG | + | chr4_4:71960901-71960920 | None:intergenic | 30.0% |
| GGGTTATATAATTCCTTTGT+TGG | - | chr4_4:71960951-71960970 | Msa0700790:CDS | 30.0% | |
| GAATTGGTTGAAATATTGGA+TGG | - | chr4_4:71961053-71961072 | Msa0700790:CDS | 30.0% | |
| ! | GACCTTTCACCAAATATTTT+TGG | + | chr4_4:71961174-71961193 | None:intergenic | 30.0% |
| TTGCTTCTTTCCTTAAATTG+AGG | - | chr4_4:71961325-71961344 | Msa0700790:CDS | 30.0% | |
| TGGTTTGATTGTAATGTGTT+TGG | - | chr4_4:71961398-71961417 | Msa0700790:CDS | 30.0% | |
| TGCTACCAAAATTGTATTTG+TGG | - | chr4_4:71961455-71961474 | Msa0700790:CDS | 30.0% | |
| ! | ACTAGCCACAAATACAATTT+TGG | + | chr4_4:71961463-71961482 | None:intergenic | 30.0% |
| TGAATCTTTGTAAGTCTAAG+AGG | - | chr4_4:71961523-71961542 | Msa0700790:CDS | 30.0% | |
| TTGGATCTTCTTCTTCTCTT+TGG | + | chr4_4:71960228-71960247 | None:intergenic | 35.0% | |
| !!! | TGTGATTTGGTTTTGGTGTT+TGG | + | chr4_4:71960247-71960266 | None:intergenic | 35.0% |
| !! | GAAATGGTGGGTTTGTTATT+TGG | - | chr4_4:71960455-71960474 | Msa0700790:CDS | 35.0% |
| ! | ATTTGGGCTAATGAAGCTTT+TGG | - | chr4_4:71960472-71960491 | Msa0700790:CDS | 35.0% |
| ! | ATGAAGCTTTTGGTCCATTT+TGG | - | chr4_4:71960482-71960501 | Msa0700790:CDS | 35.0% |
| ! | TGAAGCTTTTGGTCCATTTT+GGG | - | chr4_4:71960483-71960502 | Msa0700790:CDS | 35.0% |
| ATAGTTGGTTATACTGCAGT+TGG | - | chr4_4:71960685-71960704 | Msa0700790:CDS | 35.0% | |
| CCTAAACTTAACCATCTACT+AGG | + | chr4_4:71960775-71960794 | None:intergenic | 35.0% | |
| CCTAGTAGATGGTTAAGTTT+AGG | - | chr4_4:71960772-71960791 | Msa0700790:CDS | 35.0% | |
| ! | ATGGTTAAGTTTAGGACAAG+AGG | - | chr4_4:71960780-71960799 | Msa0700790:CDS | 35.0% |
| ! | TGGTTAAGTTTAGGACAAGA+GGG | - | chr4_4:71960781-71960800 | Msa0700790:CDS | 35.0% |
| ! | CCAGCAAATAACAAAGCTTT+TGG | + | chr4_4:71960916-71960935 | None:intergenic | 35.0% |
| !! | CCAAAAGCTTTGTTATTTGC+TGG | - | chr4_4:71960913-71960932 | Msa0700790:CDS | 35.0% |
| !! | TGCTGGATTGTTAACTTGTT+TGG | - | chr4_4:71960930-71960949 | Msa0700790:CDS | 35.0% |
| !! | GCTGGATTGTTAACTTGTTT+GGG | - | chr4_4:71960931-71960950 | Msa0700790:CDS | 35.0% |
| CTGGGAATTGGTTGAAATAT+TGG | - | chr4_4:71961049-71961068 | Msa0700790:CDS | 35.0% | |
| !!! | GGTGCTGTTTTGTCAATTAT+TGG | - | chr4_4:71961081-71961100 | Msa0700790:CDS | 35.0% |
| ! | AGTGCTGCATATCAACTTTT+AGG | - | chr4_4:71961126-71961145 | Msa0700790:CDS | 35.0% |
| !! | ACTTTTAGGTATGTCTGACT+TGG | - | chr4_4:71961140-71961159 | Msa0700790:CDS | 35.0% |
| !! | CTTTTAGGTATGTCTGACTT+GGG | - | chr4_4:71961141-71961160 | Msa0700790:CDS | 35.0% |
| ! | TATTTGGTGAAAGGTCAAAG+TGG | - | chr4_4:71961178-71961197 | Msa0700790:CDS | 35.0% |
| GAAATCAAAATTGCCATCCA+AGG | + | chr4_4:71961213-71961232 | None:intergenic | 35.0% | |
| ! | GTATAGTTTAGGGATGCTTT+TGG | - | chr4_4:71961299-71961318 | Msa0700790:CDS | 35.0% |
| AATCCAAGTGGAACCTTATA+AGG | + | chr4_4:71961375-71961394 | None:intergenic | 35.0% | |
| ATCAAACCAAAGAATCCAAG+TGG | + | chr4_4:71961387-71961406 | None:intergenic | 35.0% | |
| ATCTTTGTAAGTCTAAGAGG+TGG | - | chr4_4:71961526-71961545 | Msa0700790:CDS | 35.0% | |
| !! | AAGAGGTGGATTGAATTCAA+TGG | - | chr4_4:71961540-71961559 | Msa0700790:CDS | 35.0% |
| TGGATTGAATTCAATGGAGT+AGG | - | chr4_4:71961546-71961565 | Msa0700790:CDS | 35.0% | |
| CAATGGAGTAGGAGATAAAT+TGG | - | chr4_4:71961557-71961576 | Msa0700790:CDS | 35.0% | |
| TTGGATCTTCTTCTTCTCTT+TGG | + | chr4_4:71960228-71960247 | None:intergenic | 35.0% | |
| !!! | TGTGATTTGGTTTTGGTGTT+TGG | + | chr4_4:71960247-71960266 | None:intergenic | 35.0% |
| !! | GAAATGGTGGGTTTGTTATT+TGG | - | chr4_4:71960455-71960474 | Msa0700790:CDS | 35.0% |
| ! | ATTTGGGCTAATGAAGCTTT+TGG | - | chr4_4:71960472-71960491 | Msa0700790:CDS | 35.0% |
| ! | ATGAAGCTTTTGGTCCATTT+TGG | - | chr4_4:71960482-71960501 | Msa0700790:CDS | 35.0% |
| ! | TGAAGCTTTTGGTCCATTTT+GGG | - | chr4_4:71960483-71960502 | Msa0700790:CDS | 35.0% |
| ATAGTTGGTTATACTGCAGT+TGG | - | chr4_4:71960685-71960704 | Msa0700790:CDS | 35.0% | |
| CCTAAACTTAACCATCTACT+AGG | + | chr4_4:71960775-71960794 | None:intergenic | 35.0% | |
| CCTAGTAGATGGTTAAGTTT+AGG | - | chr4_4:71960772-71960791 | Msa0700790:CDS | 35.0% | |
| ! | ATGGTTAAGTTTAGGACAAG+AGG | - | chr4_4:71960780-71960799 | Msa0700790:CDS | 35.0% |
| ! | TGGTTAAGTTTAGGACAAGA+GGG | - | chr4_4:71960781-71960800 | Msa0700790:CDS | 35.0% |
| ! | CCAGCAAATAACAAAGCTTT+TGG | + | chr4_4:71960916-71960935 | None:intergenic | 35.0% |
| !! | CCAAAAGCTTTGTTATTTGC+TGG | - | chr4_4:71960913-71960932 | Msa0700790:CDS | 35.0% |
| !! | TGCTGGATTGTTAACTTGTT+TGG | - | chr4_4:71960930-71960949 | Msa0700790:CDS | 35.0% |
| !! | GCTGGATTGTTAACTTGTTT+GGG | - | chr4_4:71960931-71960950 | Msa0700790:CDS | 35.0% |
| CTGGGAATTGGTTGAAATAT+TGG | - | chr4_4:71961049-71961068 | Msa0700790:CDS | 35.0% | |
| !!! | GGTGCTGTTTTGTCAATTAT+TGG | - | chr4_4:71961081-71961100 | Msa0700790:CDS | 35.0% |
| ! | AGTGCTGCATATCAACTTTT+AGG | - | chr4_4:71961126-71961145 | Msa0700790:CDS | 35.0% |
| !! | ACTTTTAGGTATGTCTGACT+TGG | - | chr4_4:71961140-71961159 | Msa0700790:CDS | 35.0% |
| !! | CTTTTAGGTATGTCTGACTT+GGG | - | chr4_4:71961141-71961160 | Msa0700790:CDS | 35.0% |
| ! | TATTTGGTGAAAGGTCAAAG+TGG | - | chr4_4:71961178-71961197 | Msa0700790:CDS | 35.0% |
| GAAATCAAAATTGCCATCCA+AGG | + | chr4_4:71961213-71961232 | None:intergenic | 35.0% | |
| ! | GTATAGTTTAGGGATGCTTT+TGG | - | chr4_4:71961299-71961318 | Msa0700790:CDS | 35.0% |
| AATCCAAGTGGAACCTTATA+AGG | + | chr4_4:71961375-71961394 | None:intergenic | 35.0% | |
| ATCAAACCAAAGAATCCAAG+TGG | + | chr4_4:71961387-71961406 | None:intergenic | 35.0% | |
| ATCTTTGTAAGTCTAAGAGG+TGG | - | chr4_4:71961526-71961545 | Msa0700790:CDS | 35.0% | |
| !! | AAGAGGTGGATTGAATTCAA+TGG | - | chr4_4:71961540-71961559 | Msa0700790:CDS | 35.0% |
| TGGATTGAATTCAATGGAGT+AGG | - | chr4_4:71961546-71961565 | Msa0700790:CDS | 35.0% | |
| CAATGGAGTAGGAGATAAAT+TGG | - | chr4_4:71961557-71961576 | Msa0700790:CDS | 35.0% | |
| ! | ATTTTGTGCTGCAGAGTGAA+GGG | + | chr4_4:71960182-71960201 | None:intergenic | 40.0% |
| ! | AATTTTGTGCTGCAGAGTGA+AGG | + | chr4_4:71960183-71960202 | None:intergenic | 40.0% |
| !! | CTCATCTACTTTGAGGTATC+TGG | - | chr4_4:71960298-71960317 | Msa0700790:CDS | 40.0% |
| !! | ATCTACTTTGAGGTATCTGG+TGG | - | chr4_4:71960301-71960320 | Msa0700790:CDS | 40.0% |
| ! | ACTGTTGCTTCTTCACCATA+AGG | + | chr4_4:71960328-71960347 | None:intergenic | 40.0% |
| !!! | GGTCCACTTTTTGCAATTCT+TGG | - | chr4_4:71960358-71960377 | Msa0700790:CDS | 40.0% |
| GAATTAGCTACAACATTCCC+TGG | - | chr4_4:71960433-71960452 | Msa0700790:CDS | 40.0% | |
| TAACAAACCCACCATTTCCA+GGG | + | chr4_4:71960453-71960472 | None:intergenic | 40.0% | |
| ATAACAAACCCACCATTTCC+AGG | + | chr4_4:71960454-71960473 | None:intergenic | 40.0% | |
| ! | GAAGCTTTTGGTCCATTTTG+GGG | - | chr4_4:71960484-71960503 | Msa0700790:CDS | 40.0% |
| ! | AAGCTTTTGGTCCATTTTGG+GGG | - | chr4_4:71960485-71960504 | Msa0700790:CDS | 40.0% |
| ! | GTGATTCCTGTTTTGTCTTC+AGG | - | chr4_4:71960592-71960611 | Msa0700790:CDS | 40.0% |
| GGTAAACCTGAAGACAAAAC+AGG | + | chr4_4:71960601-71960620 | None:intergenic | 40.0% | |
| ! | GGTTATACTGCAGTTGGTTT+AGG | - | chr4_4:71960691-71960710 | Msa0700790:CDS | 40.0% |
| ! | AAGAGGGTGTGGAAAAAGAT+TGG | - | chr4_4:71960797-71960816 | Msa0700790:CDS | 40.0% |
| ! | ATTCCTTTGTTGGCTACTAC+TGG | - | chr4_4:71960961-71960980 | Msa0700790:CDS | 40.0% |
| ! | TGCCACTTGATCAAGAAGTT+TGG | - | chr4_4:71960989-71961008 | Msa0700790:CDS | 40.0% |
| GCCACTTGATCAAGAAGTTT+GGG | - | chr4_4:71960990-71961009 | Msa0700790:CDS | 40.0% | |
| ACCCAAACTTCTTGATCAAG+TGG | + | chr4_4:71960994-71961013 | None:intergenic | 40.0% | |
| CTTGATCAAGAAGTTTGGGT+TGG | - | chr4_4:71960994-71961013 | Msa0700790:CDS | 40.0% | |
| !! | ATCAAGAAGTTTGGGTTGGT+GGG | - | chr4_4:71960998-71961017 | Msa0700790:CDS | 40.0% |
| CAAAGTGGTTTAACACACCT+TGG | - | chr4_4:71961193-71961212 | Msa0700790:CDS | 40.0% | |
| AGACCTTATAAGGTTCCACT+TGG | - | chr4_4:71961369-71961388 | Msa0700790:CDS | 40.0% | |
| AAGGTTCCACTTGGATTCTT+TGG | - | chr4_4:71961378-71961397 | Msa0700790:CDS | 40.0% | |
| ACATAAACCAACAGCACAGA+TGG | + | chr4_4:71961426-71961445 | None:intergenic | 40.0% | |
| ! | ATTTTGTGCTGCAGAGTGAA+GGG | + | chr4_4:71960182-71960201 | None:intergenic | 40.0% |
| ! | AATTTTGTGCTGCAGAGTGA+AGG | + | chr4_4:71960183-71960202 | None:intergenic | 40.0% |
| !! | CTCATCTACTTTGAGGTATC+TGG | - | chr4_4:71960298-71960317 | Msa0700790:CDS | 40.0% |
| !! | ATCTACTTTGAGGTATCTGG+TGG | - | chr4_4:71960301-71960320 | Msa0700790:CDS | 40.0% |
| ! | ACTGTTGCTTCTTCACCATA+AGG | + | chr4_4:71960328-71960347 | None:intergenic | 40.0% |
| !!! | GGTCCACTTTTTGCAATTCT+TGG | - | chr4_4:71960358-71960377 | Msa0700790:CDS | 40.0% |
| GAATTAGCTACAACATTCCC+TGG | - | chr4_4:71960433-71960452 | Msa0700790:CDS | 40.0% | |
| TAACAAACCCACCATTTCCA+GGG | + | chr4_4:71960453-71960472 | None:intergenic | 40.0% | |
| ATAACAAACCCACCATTTCC+AGG | + | chr4_4:71960454-71960473 | None:intergenic | 40.0% | |
| ! | GAAGCTTTTGGTCCATTTTG+GGG | - | chr4_4:71960484-71960503 | Msa0700790:CDS | 40.0% |
| ! | AAGCTTTTGGTCCATTTTGG+GGG | - | chr4_4:71960485-71960504 | Msa0700790:CDS | 40.0% |
| ! | GTGATTCCTGTTTTGTCTTC+AGG | - | chr4_4:71960592-71960611 | Msa0700790:CDS | 40.0% |
| GGTAAACCTGAAGACAAAAC+AGG | + | chr4_4:71960601-71960620 | None:intergenic | 40.0% | |
| ! | GGTTATACTGCAGTTGGTTT+AGG | - | chr4_4:71960691-71960710 | Msa0700790:CDS | 40.0% |
| ! | AAGAGGGTGTGGAAAAAGAT+TGG | - | chr4_4:71960797-71960816 | Msa0700790:CDS | 40.0% |
| ! | ATTCCTTTGTTGGCTACTAC+TGG | - | chr4_4:71960961-71960980 | Msa0700790:CDS | 40.0% |
| ! | TGCCACTTGATCAAGAAGTT+TGG | - | chr4_4:71960989-71961008 | Msa0700790:CDS | 40.0% |
| GCCACTTGATCAAGAAGTTT+GGG | - | chr4_4:71960990-71961009 | Msa0700790:CDS | 40.0% | |
| ACCCAAACTTCTTGATCAAG+TGG | + | chr4_4:71960994-71961013 | None:intergenic | 40.0% | |
| CTTGATCAAGAAGTTTGGGT+TGG | - | chr4_4:71960994-71961013 | Msa0700790:CDS | 40.0% | |
| !! | ATCAAGAAGTTTGGGTTGGT+GGG | - | chr4_4:71960998-71961017 | Msa0700790:CDS | 40.0% |
| CAAAGTGGTTTAACACACCT+TGG | - | chr4_4:71961193-71961212 | Msa0700790:CDS | 40.0% | |
| AGACCTTATAAGGTTCCACT+TGG | - | chr4_4:71961369-71961388 | Msa0700790:CDS | 40.0% | |
| AAGGTTCCACTTGGATTCTT+TGG | - | chr4_4:71961378-71961397 | Msa0700790:CDS | 40.0% | |
| ACATAAACCAACAGCACAGA+TGG | + | chr4_4:71961426-71961445 | None:intergenic | 40.0% | |
| TCTGCAGTTAAAAGAGCCTC+TGG | + | chr4_4:71960415-71960434 | None:intergenic | 45.0% | |
| GCTACAACATTCCCTGGAAA+TGG | - | chr4_4:71960439-71960458 | Msa0700790:CDS | 45.0% | |
| ACAACATTCCCTGGAAATGG+TGG | - | chr4_4:71960442-71960461 | Msa0700790:CDS | 45.0% | |
| CAACATTCCCTGGAAATGGT+GGG | - | chr4_4:71960443-71960462 | Msa0700790:CDS | 45.0% | |
| !! | TCCATTTTGGGGGTCTCTTA+TGG | - | chr4_4:71960495-71960514 | Msa0700790:CDS | 45.0% |
| !! | CCATTTTGGGGGTCTCTTAT+GGG | - | chr4_4:71960496-71960515 | Msa0700790:CDS | 45.0% |
| ! | AAGTTTAGGACAAGAGGGTG+TGG | - | chr4_4:71960786-71960805 | Msa0700790:CDS | 45.0% |
| GATAGTGCTAGTACTCTAGC+TGG | - | chr4_4:71960862-71960881 | Msa0700790:CDS | 45.0% | |
| !! | GATCAAGAAGTTTGGGTTGG+TGG | - | chr4_4:71960997-71961016 | Msa0700790:CDS | 45.0% |
| !! | TGGTGGGTATTTTGCACATG+TGG | - | chr4_4:71961014-71961033 | Msa0700790:CDS | 45.0% |
| !! | ATGTGGCTGGTTTGATTGCT+GGG | - | chr4_4:71961031-71961050 | Msa0700790:CDS | 45.0% |
| ! | CTGGTTTGATTGCTGGGAAT+TGG | - | chr4_4:71961037-71961056 | Msa0700790:CDS | 45.0% |
| GTGGTTTAACACACCTTGGA+TGG | - | chr4_4:71961197-71961216 | Msa0700790:CDS | 45.0% | |
| ! | TTTGGTTCCATCTGTGCTGT+TGG | - | chr4_4:71961416-71961435 | Msa0700790:CDS | 45.0% |
| TCTGCAGTTAAAAGAGCCTC+TGG | + | chr4_4:71960415-71960434 | None:intergenic | 45.0% | |
| GCTACAACATTCCCTGGAAA+TGG | - | chr4_4:71960439-71960458 | Msa0700790:CDS | 45.0% | |
| ACAACATTCCCTGGAAATGG+TGG | - | chr4_4:71960442-71960461 | Msa0700790:CDS | 45.0% | |
| CAACATTCCCTGGAAATGGT+GGG | - | chr4_4:71960443-71960462 | Msa0700790:CDS | 45.0% | |
| !! | TCCATTTTGGGGGTCTCTTA+TGG | - | chr4_4:71960495-71960514 | Msa0700790:CDS | 45.0% |
| !! | CCATTTTGGGGGTCTCTTAT+GGG | - | chr4_4:71960496-71960515 | Msa0700790:CDS | 45.0% |
| ! | AAGTTTAGGACAAGAGGGTG+TGG | - | chr4_4:71960786-71960805 | Msa0700790:CDS | 45.0% |
| GATAGTGCTAGTACTCTAGC+TGG | - | chr4_4:71960862-71960881 | Msa0700790:CDS | 45.0% | |
| !! | GATCAAGAAGTTTGGGTTGG+TGG | - | chr4_4:71960997-71961016 | Msa0700790:CDS | 45.0% |
| !! | TGGTGGGTATTTTGCACATG+TGG | - | chr4_4:71961014-71961033 | Msa0700790:CDS | 45.0% |
| !! | ATGTGGCTGGTTTGATTGCT+GGG | - | chr4_4:71961031-71961050 | Msa0700790:CDS | 45.0% |
| ! | CTGGTTTGATTGCTGGGAAT+TGG | - | chr4_4:71961037-71961056 | Msa0700790:CDS | 45.0% |
| GTGGTTTAACACACCTTGGA+TGG | - | chr4_4:71961197-71961216 | Msa0700790:CDS | 45.0% | |
| ! | TTTGGTTCCATCTGTGCTGT+TGG | - | chr4_4:71961416-71961435 | Msa0700790:CDS | 45.0% |
| !!! | TTTTTTTTAATACTATTTTT+TGG | - | chr4_4:71960824-71960843 | Msa0700790:CDS | 5.0% |
| !!! | TTTTTTTTAATACTATTTTT+TGG | - | chr4_4:71960824-71960843 | Msa0700790:CDS | 5.0% |
| ! | GAGGTATCTGGTGGACCTTA+TGG | - | chr4_4:71960310-71960329 | Msa0700790:CDS | 50.0% |
| ! | GAAGCAACAGTAAGTGCTGC+AGG | - | chr4_4:71960337-71960356 | Msa0700790:CDS | 50.0% |
| CCCATAAGAGACCCCCAAAA+TGG | + | chr4_4:71960499-71960518 | None:intergenic | 50.0% | |
| GGGGGTCTCTTATGGGATAT+TGG | - | chr4_4:71960503-71960522 | Msa0700790:CDS | 50.0% | |
| GCACCAGTAGTAGCCAACAA+AGG | + | chr4_4:71960967-71960986 | None:intergenic | 50.0% | |
| ! | GGGTATTTTGCACATGTGGC+TGG | - | chr4_4:71961018-71961037 | Msa0700790:CDS | 50.0% |
| !! | CATGTGGCTGGTTTGATTGC+TGG | - | chr4_4:71961030-71961049 | Msa0700790:CDS | 50.0% |
| ! | GAGGTATCTGGTGGACCTTA+TGG | - | chr4_4:71960310-71960329 | Msa0700790:CDS | 50.0% |
| ! | GAAGCAACAGTAAGTGCTGC+AGG | - | chr4_4:71960337-71960356 | Msa0700790:CDS | 50.0% |
| CCCATAAGAGACCCCCAAAA+TGG | + | chr4_4:71960499-71960518 | None:intergenic | 50.0% | |
| GGGGGTCTCTTATGGGATAT+TGG | - | chr4_4:71960503-71960522 | Msa0700790:CDS | 50.0% | |
| GCACCAGTAGTAGCCAACAA+AGG | + | chr4_4:71960967-71960986 | None:intergenic | 50.0% | |
| ! | GGGTATTTTGCACATGTGGC+TGG | - | chr4_4:71961018-71961037 | Msa0700790:CDS | 50.0% |
| !! | CATGTGGCTGGTTTGATTGC+TGG | - | chr4_4:71961030-71961049 | Msa0700790:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 71960157 | 71961605 | 71960157 | ID=Msa0700790;Name=Msa0700790 |
| chr4_4 | mRNA | 71960157 | 71961605 | 71960157 | ID=Msa0700790-mRNA-1;Parent=Msa0700790;Name=Msa0700790-mRNA-1;_AED=0.27;_eAED=0.28;_QI=0|-1|0|1|-1|1|1|0|482 |
| chr4_4 | exon | 71960157 | 71961605 | 71960157 | ID=Msa0700790-mRNA-1:exon:21939;Parent=Msa0700790-mRNA-1 |
| chr4_4 | CDS | 71960157 | 71961605 | 71960157 | ID=Msa0700790-mRNA-1:cds;Parent=Msa0700790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
