Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617850 | XP_003629706.1 | 98.330 | 479 | 8 | 0 | 1 | 479 | 1 | 479 | 0.0 | 946 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617850 | sp|Q9LHN7|PHSC_ARATH | 60.768 | 469 | 179 | 2 | 11 | 479 | 4 | 467 | 0.0 | 575 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0617850 | Msa0656660 | 0.857741 | 1.327327e-62 | -8.615850e-47 |
| Msa0617850 | Msa0700790 | 0.864231 | 1.410562e-64 | -8.615850e-47 |
| Msa0412760 | Msa0617850 | 0.800186 | 1.621789e-48 | -8.615850e-47 |
| Msa0530380 | Msa0617850 | 0.822722 | 2.034295e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617850 | MtrunA17_Chr8g0378551 | 98.330 | 479 | 8 | 0 | 1 | 479 | 1 | 479 | 0.0 | 946 |
| Msa0617850 | MtrunA17_Chr5g0426641 | 64.719 | 445 | 152 | 1 | 35 | 479 | 20 | 459 | 0.0 | 585 |
| Msa0617850 | MtrunA17_Chr1g0211371 | 48.444 | 450 | 229 | 2 | 26 | 475 | 12 | 458 | 3.90e-152 | 441 |
| Msa0617850 | MtrunA17_Chr5g0409251 | 47.846 | 441 | 228 | 2 | 28 | 468 | 18 | 456 | 9.27e-150 | 436 |
| Msa0617850 | MtrunA17_Chr3g0094551 | 48.299 | 441 | 225 | 2 | 38 | 478 | 17 | 454 | 1.53e-149 | 434 |
| Msa0617850 | MtrunA17_Chr5g0393681 | 48.402 | 438 | 222 | 3 | 33 | 469 | 3 | 437 | 7.07e-133 | 393 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617850 | AT3G13620.1 | 60.768 | 469 | 179 | 2 | 11 | 479 | 4 | 467 | 0.0 | 575 |
| Msa0617850 | AT1G31830.1 | 48.451 | 452 | 230 | 2 | 28 | 479 | 37 | 485 | 3.82e-157 | 456 |
| Msa0617850 | AT1G31830.2 | 48.451 | 452 | 230 | 2 | 28 | 479 | 21 | 469 | 3.98e-157 | 455 |
| Msa0617850 | AT5G05630.1 | 49.091 | 440 | 223 | 1 | 29 | 468 | 42 | 480 | 2.36e-154 | 448 |
| Msa0617850 | AT1G31820.1 | 49.451 | 455 | 220 | 3 | 34 | 481 | 30 | 481 | 1.37e-152 | 443 |
| Msa0617850 | AT3G19553.1 | 50.847 | 472 | 215 | 6 | 18 | 479 | 4 | 468 | 2.61e-148 | 432 |
Find 85 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATGGTGGGTTTGTTATT+TGG | 0.119761 | 4_2:+68529663 | Msa0617850:CDS |
| AGTACTTTCTTAACATTCTT+AGG | 0.151243 | 4_2:+68530688 | Msa0617850:CDS |
| CTCATCTACTTTGAGGTATC+TGG | 0.167645 | 4_2:+68529506 | Msa0617850:CDS |
| AAGGTTCCACTTGGATTATT+TGG | 0.196544 | 4_2:+68530586 | Msa0617850:CDS |
| TCTGGAATACTCCAAATAAA+TGG | 0.207381 | 4_2:-68529602 | None:intergenic |
| CTGGGAATTGGTTGAAATAT+TGG | 0.212399 | 4_2:+68530257 | Msa0617850:CDS |
| TTGGATCTTCTTCTTCTCTT+TGG | 0.215166 | 4_2:-68529433 | None:intergenic |
| TGCTGGATTGTTAACTTGTT+TGG | 0.222119 | 4_2:+68530138 | Msa0617850:CDS |
| ACTAGCCACAAATACAATTT+TGG | 0.228986 | 4_2:-68530668 | None:intergenic |
| TACAATGAAACGACCTTATA+AGG | 0.253963 | 4_2:+68530567 | Msa0617850:CDS |
| AAATGGTGGGTTTGTTATTT+GGG | 0.257640 | 4_2:+68529664 | Msa0617850:CDS |
| TTGAAATATTGGATGGAAAT+TGG | 0.269249 | 4_2:+68530268 | Msa0617850:CDS |
| GGTTATACTGCAGTTGGTTT+AGG | 0.285281 | 4_2:+68529899 | Msa0617850:CDS |
| ATTTGGGCTAATGAAGCTTT+TGG | 0.289227 | 4_2:+68529680 | Msa0617850:CDS |
| AATCCAAGTGGAACCTTATA+AGG | 0.308677 | 4_2:-68530580 | None:intergenic |
| TGCCACTTGATCAAGAAGTT+TGG | 0.318408 | 4_2:+68530197 | Msa0617850:CDS |
| CTGGTTTGATTGCTGGGAAT+TGG | 0.320667 | 4_2:+68530245 | Msa0617850:CDS |
| GGGTTATATAATTCCTTTGT+TGG | 0.320719 | 4_2:+68530159 | Msa0617850:CDS |
| CAATGGAGTAGGAGATAAAT+TGG | 0.322700 | 4_2:+68530765 | Msa0617850:CDS |
| AGATAATCTATACATAGAAT+TGG | 0.327996 | 4_2:-68529770 | None:intergenic |
| CCTAGTAGATGGTTAAGTTT+AGG | 0.331119 | 4_2:+68529980 | Msa0617850:CDS |
| GCCACTTGATCAAGAAGTTT+GGG | 0.332993 | 4_2:+68530198 | Msa0617850:CDS |
| CATGTGGCTGGTTTGATTGC+TGG | 0.333123 | 4_2:+68530238 | Msa0617850:CDS |
| GTATAGTTTAGGGATGCTTT+TGG | 0.333266 | 4_2:+68530507 | Msa0617850:CDS |
| GCTGGATTGTTAACTTGTTT+GGG | 0.336043 | 4_2:+68530139 | Msa0617850:CDS |
| AATCTTTCTCATCTACTTTG+AGG | 0.359694 | 4_2:+68529499 | Msa0617850:CDS |
| TAAACCAGAATAATTCAAAA+AGG | 0.378273 | 4_2:-68529867 | None:intergenic |
| GAGGTATCTGGTGGACCTTA+TGG | 0.387052 | 4_2:+68529518 | Msa0617850:CDS |
| TTATAAGGTCGTTTCATTGT+AGG | 0.398852 | 4_2:-68530565 | None:intergenic |
| TGCTACCAAAATTGTATTTG+TGG | 0.406271 | 4_2:+68530663 | Msa0617850:CDS |
| ATAACAAACCCACCATTTCC+AGG | 0.406978 | 4_2:-68529659 | None:intergenic |
| TATAAGGTCGTTTCATTGTA+GGG | 0.413037 | 4_2:-68530564 | None:intergenic |
| GTTTAGAAGATGTTGATGAT+AGG | 0.416793 | 4_2:-68529411 | None:intergenic |
| ATTCCTTTGTTGGCTACTAC+CGG | 0.417944 | 4_2:+68530169 | Msa0617850:CDS |
| ATGTGGCTGGTTTGATTGCT+GGG | 0.424967 | 4_2:+68530239 | Msa0617850:CDS |
| GTACTTTCTTAACATTCTTA+GGG | 0.425423 | 4_2:+68530689 | Msa0617850:CDS |
| TATTCTGGTTTAGCTATAGT+TGG | 0.426561 | 4_2:+68529878 | Msa0617850:CDS |
| CTGGAATACTCCAAATAAAT+GGG | 0.440921 | 4_2:-68529601 | None:intergenic |
| TCCTTTGTTGGCTACTACCG+GGG | 0.443324 | 4_2:+68530171 | Msa0617850:CDS |
| ACATTAACACAAAGGGCAAA+AGG | 0.443673 | 4_2:-68529931 | None:intergenic |
| ACTGTTGCTTCTTCACCATA+AGG | 0.446104 | 4_2:-68529533 | None:intergenic |
| TCTGCAGTTAAAAGAGCCTC+TGG | 0.446328 | 4_2:-68529620 | None:intergenic |
| GCTACAACATTCCCTGGAAA+TGG | 0.446788 | 4_2:+68529647 | Msa0617850:CDS |
| AAGTAGATGAGAAAGATTAG+AGG | 0.454596 | 4_2:-68529494 | None:intergenic |
| TGAATCTTTGTAAGTCTAAG+AGG | 0.460463 | 4_2:+68530731 | Msa0617850:CDS |
| TTCCTTTGTTGGCTACTACC+GGG | 0.460814 | 4_2:+68530170 | Msa0617850:CDS |
| CGACCTTATAAGGTTCCACT+TGG | 0.461269 | 4_2:+68530577 | Msa0617850:CDS |
| CTAAAATTGATCCTAGTAGA+TGG | 0.462759 | 4_2:+68529969 | Msa0617850:CDS |
| GATAATCTATACATAGAATT+GGG | 0.465775 | 4_2:-68529769 | None:intergenic |
| ATCAAAGACATTAACACAAA+GGG | 0.476966 | 4_2:-68529938 | None:intergenic |
| CCTAAACTTAACCATCTACT+AGG | 0.478755 | 4_2:-68529980 | None:intergenic |
| ATGGTTAAGTTTAGGACAAG+AGG | 0.482198 | 4_2:+68529988 | Msa0617850:CDS |
| ATCAAGAAGTTTGGGTTGGT+GGG | 0.495054 | 4_2:+68530206 | Msa0617850:CDS |
| GATCAAGAAGTTTGGGTTGG+TGG | 0.497496 | 4_2:+68530205 | Msa0617850:CDS |
| GGTAAACCTGAAGACAAAAC+AGG | 0.502863 | 4_2:-68529806 | None:intergenic |
| CATTAACACAAAGGGCAAAA+GGG | 0.503892 | 4_2:-68529930 | None:intergenic |
| GATAGTGCTAGTACTTTAGC+TGG | 0.506350 | 4_2:+68530070 | Msa0617850:CDS |
| ATAGTTGGTTATACTGCAGT+TGG | 0.509080 | 4_2:+68529893 | Msa0617850:CDS |
| GAAGCAACAGTAAGTGCTGC+AGG | 0.513783 | 4_2:+68529545 | Msa0617850:CDS |
| AGTAGATGAGAAAGATTAGA+GGG | 0.514522 | 4_2:-68529493 | None:intergenic |
| TGGTTAAGTTTAGGACAAGA+GGG | 0.515356 | 4_2:+68529989 | Msa0617850:CDS |
| GTGGTTTAACACACCTTGGA+TGG | 0.518671 | 4_2:+68530405 | Msa0617850:CDS |
| GAATTAGCTACAACATTCCC+TGG | 0.531597 | 4_2:+68529641 | Msa0617850:CDS |
| ACATAAACCAACAGCACAGA+TGG | 0.538480 | 4_2:-68530631 | None:intergenic |
| CTTGATCAAGAAGTTTGGGT+TGG | 0.540498 | 4_2:+68530202 | Msa0617850:CDS |
| TGGATTGAATTCAATGGAGT+AGG | 0.540871 | 4_2:+68530754 | Msa0617850:CDS |
| TTGCTTCTTTCCTTAAGTTG+AGG | 0.541531 | 4_2:+68530533 | Msa0617850:CDS |
| AAGAGGTGGATTGAATTCAA+TGG | 0.542090 | 4_2:+68530748 | Msa0617850:CDS |
| CAAAGTGGTTTAACACACCT+TGG | 0.542336 | 4_2:+68530401 | Msa0617850:CDS |
| ATCTACTTTGAGGTATCTGG+TGG | 0.545094 | 4_2:+68529509 | Msa0617850:CDS |
| AAGTTTAGGACAAGAGGGTG+TGG | 0.548272 | 4_2:+68529994 | Msa0617850:CDS |
| ACCCAAACTTCTTGATCAAG+TGG | 0.548962 | 4_2:-68530199 | None:intergenic |
| ACAACATTCCCTGGAAATGG+TGG | 0.555951 | 4_2:+68529650 | Msa0617850:CDS |
| ATTTCAACAATAATATCACT+TGG | 0.558408 | 4_2:+68530436 | Msa0617850:CDS |
| TTGATCAAGTGGCATAGCCC+CGG | 0.575447 | 4_2:-68530188 | None:intergenic |
| TAACAAACCCACCATTTCCA+GGG | 0.582040 | 4_2:-68529658 | None:intergenic |
| GAAATCAAAATTGCCATCCA+AGG | 0.585439 | 4_2:-68530418 | None:intergenic |
| ATCAAACCAAATAATCCAAG+TGG | 0.590306 | 4_2:-68530592 | None:intergenic |
| GAATTGGTTGAAATATTGGA+TGG | 0.593097 | 4_2:+68530261 | Msa0617850:CDS |
| CAACATTCCCTGGAAATGGT+GGG | 0.601942 | 4_2:+68529651 | Msa0617850:CDS |
| ATCTTTGTAAGTCTAAGAGG+TGG | 0.616056 | 4_2:+68530734 | Msa0617850:CDS |
| ATTTATTTGGAGTATTCCAG+AGG | 0.619283 | 4_2:+68529604 | Msa0617850:CDS |
| AATCAAAGACATTAACACAA+AGG | 0.619734 | 4_2:-68529939 | None:intergenic |
| TATTTGGTGAAAGGTCAAAG+TGG | 0.630257 | 4_2:+68530386 | Msa0617850:CDS |
| GCCCCGGTAGTAGCCAACAA+AGG | 0.665760 | 4_2:-68530172 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTCAATACTATTTTT+TGG | + | chr4_2:68530032-68530051 | Msa0617850:CDS | 10.0% |
| !!! | TTAATTTTTTGTATAGTTTA+GGG | + | chr4_2:68530497-68530516 | Msa0617850:CDS | 10.0% |
| !!! | TTTTTTTCAATACTATTTTT+TGG | + | chr4_2:68530032-68530051 | Msa0617850:CDS | 10.0% |
| !!! | TTAATTTTTTGTATAGTTTA+GGG | + | chr4_2:68530497-68530516 | Msa0617850:CDS | 10.0% |
| !!! | TTATAATTTTCCCATTTATT+TGG | + | chr4_2:68529591-68529610 | Msa0617850:CDS | 15.0% |
| !!! | GTTAATTTTTTGTATAGTTT+AGG | + | chr4_2:68530496-68530515 | Msa0617850:CDS | 15.0% |
| !!! | TTATAATTTTCCCATTTATT+TGG | + | chr4_2:68529591-68529610 | Msa0617850:CDS | 15.0% |
| !!! | GTTAATTTTTTGTATAGTTT+AGG | + | chr4_2:68530496-68530515 | Msa0617850:CDS | 15.0% |
| !!! | TTTTTTTGTGATTTGGTTTT+GGG | - | chr4_2:68529461-68529480 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGTGATTTGGTTT+TGG | - | chr4_2:68529462-68529481 | None:intergenic | 20.0% |
| !! | GATAATCTATACATAGAATT+GGG | - | chr4_2:68529772-68529791 | None:intergenic | 20.0% |
| !! | AGATAATCTATACATAGAAT+TGG | - | chr4_2:68529773-68529792 | None:intergenic | 20.0% |
| !! | TAAACCAGAATAATTCAAAA+AGG | - | chr4_2:68529870-68529889 | None:intergenic | 20.0% |
| !!! | TTTTTTGGAACTTGAATTTT+TGG | + | chr4_2:68530047-68530066 | Msa0617850:CDS | 20.0% |
| !!! | TTTTTGGAACTTGAATTTTT+GGG | + | chr4_2:68530048-68530067 | Msa0617850:CDS | 20.0% |
| !! | ATTTCAACAATAATATCACT+TGG | + | chr4_2:68530436-68530455 | Msa0617850:CDS | 20.0% |
| !! | ACTATACAAAAAATTAACAG+TGG | - | chr4_2:68530494-68530513 | None:intergenic | 20.0% |
| !!! | TTTTTTTGTGATTTGGTTTT+GGG | - | chr4_2:68529461-68529480 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGTGATTTGGTTT+TGG | - | chr4_2:68529462-68529481 | None:intergenic | 20.0% |
| !! | GATAATCTATACATAGAATT+GGG | - | chr4_2:68529772-68529791 | None:intergenic | 20.0% |
| !! | AGATAATCTATACATAGAAT+TGG | - | chr4_2:68529773-68529792 | None:intergenic | 20.0% |
| !! | TAAACCAGAATAATTCAAAA+AGG | - | chr4_2:68529870-68529889 | None:intergenic | 20.0% |
| !!! | TTTTTTGGAACTTGAATTTT+TGG | + | chr4_2:68530047-68530066 | Msa0617850:CDS | 20.0% |
| !!! | TTTTTGGAACTTGAATTTTT+GGG | + | chr4_2:68530048-68530067 | Msa0617850:CDS | 20.0% |
| !! | ATTTCAACAATAATATCACT+TGG | + | chr4_2:68530436-68530455 | Msa0617850:CDS | 20.0% |
| !! | ACTATACAAAAAATTAACAG+TGG | - | chr4_2:68530494-68530513 | None:intergenic | 20.0% |
| !!! | TTTTTTGTGATTTGGTTTTG+GGG | - | chr4_2:68529460-68529479 | None:intergenic | 25.0% |
| !!! | TGCTAGTTTTTTTTGTGATT+TGG | - | chr4_2:68529468-68529487 | None:intergenic | 25.0% |
| !! | TTGTCCTTTTTGAATTATTC+TGG | + | chr4_2:68529863-68529882 | Msa0617850:CDS | 25.0% |
| ! | ATCAAAGACATTAACACAAA+GGG | - | chr4_2:68529941-68529960 | None:intergenic | 25.0% |
| ! | AATCAAAGACATTAACACAA+AGG | - | chr4_2:68529942-68529961 | None:intergenic | 25.0% |
| ! | TTGAAATATTGGATGGAAAT+TGG | + | chr4_2:68530268-68530287 | Msa0617850:CDS | 25.0% |
| ! | GGATTCATACCAAAAATATT+TGG | + | chr4_2:68530370-68530389 | Msa0617850:CDS | 25.0% |
| !! | TACCAAAAATATTTGGTGAA+AGG | + | chr4_2:68530377-68530396 | Msa0617850:CDS | 25.0% |
| ! | AGTACTTTCTTAACATTCTT+AGG | + | chr4_2:68530688-68530707 | Msa0617850:CDS | 25.0% |
| ! | GTACTTTCTTAACATTCTTA+GGG | + | chr4_2:68530689-68530708 | Msa0617850:CDS | 25.0% |
| !!! | TTTTTTGTGATTTGGTTTTG+GGG | - | chr4_2:68529460-68529479 | None:intergenic | 25.0% |
| !!! | TGCTAGTTTTTTTTGTGATT+TGG | - | chr4_2:68529468-68529487 | None:intergenic | 25.0% |
| !! | TTGTCCTTTTTGAATTATTC+TGG | + | chr4_2:68529863-68529882 | Msa0617850:CDS | 25.0% |
| ! | ATCAAAGACATTAACACAAA+GGG | - | chr4_2:68529941-68529960 | None:intergenic | 25.0% |
| ! | AATCAAAGACATTAACACAA+AGG | - | chr4_2:68529942-68529961 | None:intergenic | 25.0% |
| ! | TTGAAATATTGGATGGAAAT+TGG | + | chr4_2:68530268-68530287 | Msa0617850:CDS | 25.0% |
| ! | GGATTCATACCAAAAATATT+TGG | + | chr4_2:68530370-68530389 | Msa0617850:CDS | 25.0% |
| !! | TACCAAAAATATTTGGTGAA+AGG | + | chr4_2:68530377-68530396 | Msa0617850:CDS | 25.0% |
| ! | AGTACTTTCTTAACATTCTT+AGG | + | chr4_2:68530688-68530707 | Msa0617850:CDS | 25.0% |
| ! | GTACTTTCTTAACATTCTTA+GGG | + | chr4_2:68530689-68530708 | Msa0617850:CDS | 25.0% |
| !! | GTTTAGAAGATGTTGATGAT+AGG | - | chr4_2:68529414-68529433 | None:intergenic | 30.0% |
| AGTAGATGAGAAAGATTAGA+GGG | - | chr4_2:68529496-68529515 | None:intergenic | 30.0% | |
| AAGTAGATGAGAAAGATTAG+AGG | - | chr4_2:68529497-68529516 | None:intergenic | 30.0% | |
| AATCTTTCTCATCTACTTTG+AGG | + | chr4_2:68529499-68529518 | Msa0617850:CDS | 30.0% | |
| AATCCAAGAATTGCAAAAAG+TGG | - | chr4_2:68529572-68529591 | None:intergenic | 30.0% | |
| CTGGAATACTCCAAATAAAT+GGG | - | chr4_2:68529604-68529623 | None:intergenic | 30.0% | |
| ! | TCTGGAATACTCCAAATAAA+TGG | - | chr4_2:68529605-68529624 | None:intergenic | 30.0% |
| ! | ATTTATTTGGAGTATTCCAG+AGG | + | chr4_2:68529604-68529623 | Msa0617850:CDS | 30.0% |
| !! | AAATGGTGGGTTTGTTATTT+GGG | + | chr4_2:68529664-68529683 | Msa0617850:CDS | 30.0% |
| ! | GGATATTGGAAATTCTTTTG+TGG | + | chr4_2:68529725-68529744 | Msa0617850:CDS | 30.0% |
| ACAAAAATAGACACAATACG+AGG | - | chr4_2:68529830-68529849 | None:intergenic | 30.0% | |
| !! | TATTCTGGTTTAGCTATAGT+TGG | + | chr4_2:68529878-68529897 | Msa0617850:CDS | 30.0% |
| ! | CATCTACTAGGATCAATTTT+AGG | - | chr4_2:68529971-68529990 | None:intergenic | 30.0% |
| CTAAAATTGATCCTAGTAGA+TGG | + | chr4_2:68529969-68529988 | Msa0617850:CDS | 30.0% | |
| !!! | GCTTTAGGAAAAGTTTTATG+TGG | - | chr4_2:68530109-68530128 | None:intergenic | 30.0% |
| GGGTTATATAATTCCTTTGT+TGG | + | chr4_2:68530159-68530178 | Msa0617850:CDS | 30.0% | |
| GAATTGGTTGAAATATTGGA+TGG | + | chr4_2:68530261-68530280 | Msa0617850:CDS | 30.0% | |
| ! | GACCTTTCACCAAATATTTT+TGG | - | chr4_2:68530382-68530401 | None:intergenic | 30.0% |
| !!! | GGAATTTTTTCCTCAACTTA+AGG | - | chr4_2:68530546-68530565 | None:intergenic | 30.0% |
| TATAAGGTCGTTTCATTGTA+GGG | - | chr4_2:68530567-68530586 | None:intergenic | 30.0% | |
| TTATAAGGTCGTTTCATTGT+AGG | - | chr4_2:68530568-68530587 | None:intergenic | 30.0% | |
| TACAATGAAACGACCTTATA+AGG | + | chr4_2:68530567-68530586 | Msa0617850:CDS | 30.0% | |
| ATCAAACCAAATAATCCAAG+TGG | - | chr4_2:68530595-68530614 | None:intergenic | 30.0% | |
| TGCTACCAAAATTGTATTTG+TGG | + | chr4_2:68530663-68530682 | Msa0617850:CDS | 30.0% | |
| ! | ACTAGCCACAAATACAATTT+TGG | - | chr4_2:68530671-68530690 | None:intergenic | 30.0% |
| TGAATCTTTGTAAGTCTAAG+AGG | + | chr4_2:68530731-68530750 | Msa0617850:CDS | 30.0% | |
| !! | GTTTAGAAGATGTTGATGAT+AGG | - | chr4_2:68529414-68529433 | None:intergenic | 30.0% |
| AGTAGATGAGAAAGATTAGA+GGG | - | chr4_2:68529496-68529515 | None:intergenic | 30.0% | |
| AAGTAGATGAGAAAGATTAG+AGG | - | chr4_2:68529497-68529516 | None:intergenic | 30.0% | |
| AATCTTTCTCATCTACTTTG+AGG | + | chr4_2:68529499-68529518 | Msa0617850:CDS | 30.0% | |
| AATCCAAGAATTGCAAAAAG+TGG | - | chr4_2:68529572-68529591 | None:intergenic | 30.0% | |
| CTGGAATACTCCAAATAAAT+GGG | - | chr4_2:68529604-68529623 | None:intergenic | 30.0% | |
| ! | TCTGGAATACTCCAAATAAA+TGG | - | chr4_2:68529605-68529624 | None:intergenic | 30.0% |
| ! | ATTTATTTGGAGTATTCCAG+AGG | + | chr4_2:68529604-68529623 | Msa0617850:CDS | 30.0% |
| !! | AAATGGTGGGTTTGTTATTT+GGG | + | chr4_2:68529664-68529683 | Msa0617850:CDS | 30.0% |
| ! | GGATATTGGAAATTCTTTTG+TGG | + | chr4_2:68529725-68529744 | Msa0617850:CDS | 30.0% |
| ACAAAAATAGACACAATACG+AGG | - | chr4_2:68529830-68529849 | None:intergenic | 30.0% | |
| !! | TATTCTGGTTTAGCTATAGT+TGG | + | chr4_2:68529878-68529897 | Msa0617850:CDS | 30.0% |
| ! | CATCTACTAGGATCAATTTT+AGG | - | chr4_2:68529971-68529990 | None:intergenic | 30.0% |
| CTAAAATTGATCCTAGTAGA+TGG | + | chr4_2:68529969-68529988 | Msa0617850:CDS | 30.0% | |
| !!! | GCTTTAGGAAAAGTTTTATG+TGG | - | chr4_2:68530109-68530128 | None:intergenic | 30.0% |
| GGGTTATATAATTCCTTTGT+TGG | + | chr4_2:68530159-68530178 | Msa0617850:CDS | 30.0% | |
| GAATTGGTTGAAATATTGGA+TGG | + | chr4_2:68530261-68530280 | Msa0617850:CDS | 30.0% | |
| ! | GACCTTTCACCAAATATTTT+TGG | - | chr4_2:68530382-68530401 | None:intergenic | 30.0% |
| !!! | GGAATTTTTTCCTCAACTTA+AGG | - | chr4_2:68530546-68530565 | None:intergenic | 30.0% |
| TATAAGGTCGTTTCATTGTA+GGG | - | chr4_2:68530567-68530586 | None:intergenic | 30.0% | |
| TTATAAGGTCGTTTCATTGT+AGG | - | chr4_2:68530568-68530587 | None:intergenic | 30.0% | |
| TACAATGAAACGACCTTATA+AGG | + | chr4_2:68530567-68530586 | Msa0617850:CDS | 30.0% | |
| ATCAAACCAAATAATCCAAG+TGG | - | chr4_2:68530595-68530614 | None:intergenic | 30.0% | |
| TGCTACCAAAATTGTATTTG+TGG | + | chr4_2:68530663-68530682 | Msa0617850:CDS | 30.0% | |
| ! | ACTAGCCACAAATACAATTT+TGG | - | chr4_2:68530671-68530690 | None:intergenic | 30.0% |
| TGAATCTTTGTAAGTCTAAG+AGG | + | chr4_2:68530731-68530750 | Msa0617850:CDS | 30.0% | |
| TTGGATCTTCTTCTTCTCTT+TGG | - | chr4_2:68529436-68529455 | None:intergenic | 35.0% | |
| !! | GAAATGGTGGGTTTGTTATT+TGG | + | chr4_2:68529663-68529682 | Msa0617850:CDS | 35.0% |
| ! | ATTTGGGCTAATGAAGCTTT+TGG | + | chr4_2:68529680-68529699 | Msa0617850:CDS | 35.0% |
| ! | ATGAAGCTTTTGGTCCATTT+TGG | + | chr4_2:68529690-68529709 | Msa0617850:CDS | 35.0% |
| ! | TGAAGCTTTTGGTCCATTTT+GGG | + | chr4_2:68529691-68529710 | Msa0617850:CDS | 35.0% |
| ATAGTTGGTTATACTGCAGT+TGG | + | chr4_2:68529893-68529912 | Msa0617850:CDS | 35.0% | |
| CATTAACACAAAGGGCAAAA+GGG | - | chr4_2:68529933-68529952 | None:intergenic | 35.0% | |
| ACATTAACACAAAGGGCAAA+AGG | - | chr4_2:68529934-68529953 | None:intergenic | 35.0% | |
| CCTAAACTTAACCATCTACT+AGG | - | chr4_2:68529983-68530002 | None:intergenic | 35.0% | |
| CCTAGTAGATGGTTAAGTTT+AGG | + | chr4_2:68529980-68529999 | Msa0617850:CDS | 35.0% | |
| ! | ATGGTTAAGTTTAGGACAAG+AGG | + | chr4_2:68529988-68530007 | Msa0617850:CDS | 35.0% |
| ! | TGGTTAAGTTTAGGACAAGA+GGG | + | chr4_2:68529989-68530008 | Msa0617850:CDS | 35.0% |
| !! | TGCTGGATTGTTAACTTGTT+TGG | + | chr4_2:68530138-68530157 | Msa0617850:CDS | 35.0% |
| !! | GCTGGATTGTTAACTTGTTT+GGG | + | chr4_2:68530139-68530158 | Msa0617850:CDS | 35.0% |
| CTGGGAATTGGTTGAAATAT+TGG | + | chr4_2:68530257-68530276 | Msa0617850:CDS | 35.0% | |
| !!! | GGTGCTGTTTTGTCAATTAT+TGG | + | chr4_2:68530289-68530308 | Msa0617850:CDS | 35.0% |
| ! | AGTGCTGCATATCAACTTTT+AGG | + | chr4_2:68530334-68530353 | Msa0617850:CDS | 35.0% |
| !! | ACTTTTAGGTATGTCTGACT+TGG | + | chr4_2:68530348-68530367 | Msa0617850:CDS | 35.0% |
| !! | CTTTTAGGTATGTCTGACTT+GGG | + | chr4_2:68530349-68530368 | Msa0617850:CDS | 35.0% |
| ! | TATTTGGTGAAAGGTCAAAG+TGG | + | chr4_2:68530386-68530405 | Msa0617850:CDS | 35.0% |
| GAAATCAAAATTGCCATCCA+AGG | - | chr4_2:68530421-68530440 | None:intergenic | 35.0% | |
| ! | GTATAGTTTAGGGATGCTTT+TGG | + | chr4_2:68530507-68530526 | Msa0617850:CDS | 35.0% |
| ! | TTGCTTCTTTCCTTAAGTTG+AGG | + | chr4_2:68530533-68530552 | Msa0617850:CDS | 35.0% |
| AATCCAAGTGGAACCTTATA+AGG | - | chr4_2:68530583-68530602 | None:intergenic | 35.0% | |
| AAGGTTCCACTTGGATTATT+TGG | + | chr4_2:68530586-68530605 | Msa0617850:CDS | 35.0% | |
| ATCTTTGTAAGTCTAAGAGG+TGG | + | chr4_2:68530734-68530753 | Msa0617850:CDS | 35.0% | |
| !! | AAGAGGTGGATTGAATTCAA+TGG | + | chr4_2:68530748-68530767 | Msa0617850:CDS | 35.0% |
| TGGATTGAATTCAATGGAGT+AGG | + | chr4_2:68530754-68530773 | Msa0617850:CDS | 35.0% | |
| CAATGGAGTAGGAGATAAAT+TGG | + | chr4_2:68530765-68530784 | Msa0617850:CDS | 35.0% | |
| TTGGATCTTCTTCTTCTCTT+TGG | - | chr4_2:68529436-68529455 | None:intergenic | 35.0% | |
| !! | GAAATGGTGGGTTTGTTATT+TGG | + | chr4_2:68529663-68529682 | Msa0617850:CDS | 35.0% |
| ! | ATTTGGGCTAATGAAGCTTT+TGG | + | chr4_2:68529680-68529699 | Msa0617850:CDS | 35.0% |
| ! | ATGAAGCTTTTGGTCCATTT+TGG | + | chr4_2:68529690-68529709 | Msa0617850:CDS | 35.0% |
| ! | TGAAGCTTTTGGTCCATTTT+GGG | + | chr4_2:68529691-68529710 | Msa0617850:CDS | 35.0% |
| ATAGTTGGTTATACTGCAGT+TGG | + | chr4_2:68529893-68529912 | Msa0617850:CDS | 35.0% | |
| CATTAACACAAAGGGCAAAA+GGG | - | chr4_2:68529933-68529952 | None:intergenic | 35.0% | |
| ACATTAACACAAAGGGCAAA+AGG | - | chr4_2:68529934-68529953 | None:intergenic | 35.0% | |
| CCTAAACTTAACCATCTACT+AGG | - | chr4_2:68529983-68530002 | None:intergenic | 35.0% | |
| CCTAGTAGATGGTTAAGTTT+AGG | + | chr4_2:68529980-68529999 | Msa0617850:CDS | 35.0% | |
| ! | ATGGTTAAGTTTAGGACAAG+AGG | + | chr4_2:68529988-68530007 | Msa0617850:CDS | 35.0% |
| ! | TGGTTAAGTTTAGGACAAGA+GGG | + | chr4_2:68529989-68530008 | Msa0617850:CDS | 35.0% |
| !! | TGCTGGATTGTTAACTTGTT+TGG | + | chr4_2:68530138-68530157 | Msa0617850:CDS | 35.0% |
| !! | GCTGGATTGTTAACTTGTTT+GGG | + | chr4_2:68530139-68530158 | Msa0617850:CDS | 35.0% |
| CTGGGAATTGGTTGAAATAT+TGG | + | chr4_2:68530257-68530276 | Msa0617850:CDS | 35.0% | |
| !!! | GGTGCTGTTTTGTCAATTAT+TGG | + | chr4_2:68530289-68530308 | Msa0617850:CDS | 35.0% |
| ! | AGTGCTGCATATCAACTTTT+AGG | + | chr4_2:68530334-68530353 | Msa0617850:CDS | 35.0% |
| !! | ACTTTTAGGTATGTCTGACT+TGG | + | chr4_2:68530348-68530367 | Msa0617850:CDS | 35.0% |
| !! | CTTTTAGGTATGTCTGACTT+GGG | + | chr4_2:68530349-68530368 | Msa0617850:CDS | 35.0% |
| ! | TATTTGGTGAAAGGTCAAAG+TGG | + | chr4_2:68530386-68530405 | Msa0617850:CDS | 35.0% |
| GAAATCAAAATTGCCATCCA+AGG | - | chr4_2:68530421-68530440 | None:intergenic | 35.0% | |
| ! | GTATAGTTTAGGGATGCTTT+TGG | + | chr4_2:68530507-68530526 | Msa0617850:CDS | 35.0% |
| ! | TTGCTTCTTTCCTTAAGTTG+AGG | + | chr4_2:68530533-68530552 | Msa0617850:CDS | 35.0% |
| AATCCAAGTGGAACCTTATA+AGG | - | chr4_2:68530583-68530602 | None:intergenic | 35.0% | |
| AAGGTTCCACTTGGATTATT+TGG | + | chr4_2:68530586-68530605 | Msa0617850:CDS | 35.0% | |
| ATCTTTGTAAGTCTAAGAGG+TGG | + | chr4_2:68530734-68530753 | Msa0617850:CDS | 35.0% | |
| !! | AAGAGGTGGATTGAATTCAA+TGG | + | chr4_2:68530748-68530767 | Msa0617850:CDS | 35.0% |
| TGGATTGAATTCAATGGAGT+AGG | + | chr4_2:68530754-68530773 | Msa0617850:CDS | 35.0% | |
| CAATGGAGTAGGAGATAAAT+TGG | + | chr4_2:68530765-68530784 | Msa0617850:CDS | 35.0% | |
| ! | ATTTTGTGCTGCAGAGTGAA+GGG | - | chr4_2:68529390-68529409 | None:intergenic | 40.0% |
| ! | AATTTTGTGCTGCAGAGTGA+AGG | - | chr4_2:68529391-68529410 | None:intergenic | 40.0% |
| !!! | TGTGATTTGGTTTTGGGGTT+TGG | - | chr4_2:68529455-68529474 | None:intergenic | 40.0% |
| !! | CTCATCTACTTTGAGGTATC+TGG | + | chr4_2:68529506-68529525 | Msa0617850:CDS | 40.0% |
| !! | ATCTACTTTGAGGTATCTGG+TGG | + | chr4_2:68529509-68529528 | Msa0617850:CDS | 40.0% |
| ! | ACTGTTGCTTCTTCACCATA+AGG | - | chr4_2:68529536-68529555 | None:intergenic | 40.0% |
| !!! | GGTCCACTTTTTGCAATTCT+TGG | + | chr4_2:68529566-68529585 | Msa0617850:CDS | 40.0% |
| GAATTAGCTACAACATTCCC+TGG | + | chr4_2:68529641-68529660 | Msa0617850:CDS | 40.0% | |
| TAACAAACCCACCATTTCCA+GGG | - | chr4_2:68529661-68529680 | None:intergenic | 40.0% | |
| ATAACAAACCCACCATTTCC+AGG | - | chr4_2:68529662-68529681 | None:intergenic | 40.0% | |
| ! | GAAGCTTTTGGTCCATTTTG+GGG | + | chr4_2:68529692-68529711 | Msa0617850:CDS | 40.0% |
| ! | AAGCTTTTGGTCCATTTTGG+GGG | + | chr4_2:68529693-68529712 | Msa0617850:CDS | 40.0% |
| ! | GTGATTCCTGTTTTGTCTTC+AGG | + | chr4_2:68529800-68529819 | Msa0617850:CDS | 40.0% |
| GGTAAACCTGAAGACAAAAC+AGG | - | chr4_2:68529809-68529828 | None:intergenic | 40.0% | |
| ! | GGTTATACTGCAGTTGGTTT+AGG | + | chr4_2:68529899-68529918 | Msa0617850:CDS | 40.0% |
| ! | AAGAGGGTGTGGAAAAAGAT+TGG | + | chr4_2:68530005-68530024 | Msa0617850:CDS | 40.0% |
| GATAGTGCTAGTACTTTAGC+TGG | + | chr4_2:68530070-68530089 | Msa0617850:CDS | 40.0% | |
| CCAGCAAAAAGCAAAGCTTT+AGG | - | chr4_2:68530124-68530143 | None:intergenic | 40.0% | |
| !!! | CCTAAAGCTTTGCTTTTTGC+TGG | + | chr4_2:68530121-68530140 | Msa0617850:CDS | 40.0% |
| ! | ATTCCTTTGTTGGCTACTAC+CGG | + | chr4_2:68530169-68530188 | Msa0617850:CDS | 40.0% |
| ! | TGCCACTTGATCAAGAAGTT+TGG | + | chr4_2:68530197-68530216 | Msa0617850:CDS | 40.0% |
| GCCACTTGATCAAGAAGTTT+GGG | + | chr4_2:68530198-68530217 | Msa0617850:CDS | 40.0% | |
| ACCCAAACTTCTTGATCAAG+TGG | - | chr4_2:68530202-68530221 | None:intergenic | 40.0% | |
| CTTGATCAAGAAGTTTGGGT+TGG | + | chr4_2:68530202-68530221 | Msa0617850:CDS | 40.0% | |
| !! | ATCAAGAAGTTTGGGTTGGT+GGG | + | chr4_2:68530206-68530225 | Msa0617850:CDS | 40.0% |
| CAAAGTGGTTTAACACACCT+TGG | + | chr4_2:68530401-68530420 | Msa0617850:CDS | 40.0% | |
| ! | TTTTGTTCCATCTGTGCTGT+TGG | + | chr4_2:68530624-68530643 | Msa0617850:CDS | 40.0% |
| ACATAAACCAACAGCACAGA+TGG | - | chr4_2:68530634-68530653 | None:intergenic | 40.0% | |
| ! | ATTTTGTGCTGCAGAGTGAA+GGG | - | chr4_2:68529390-68529409 | None:intergenic | 40.0% |
| ! | AATTTTGTGCTGCAGAGTGA+AGG | - | chr4_2:68529391-68529410 | None:intergenic | 40.0% |
| !!! | TGTGATTTGGTTTTGGGGTT+TGG | - | chr4_2:68529455-68529474 | None:intergenic | 40.0% |
| !! | CTCATCTACTTTGAGGTATC+TGG | + | chr4_2:68529506-68529525 | Msa0617850:CDS | 40.0% |
| !! | ATCTACTTTGAGGTATCTGG+TGG | + | chr4_2:68529509-68529528 | Msa0617850:CDS | 40.0% |
| ! | ACTGTTGCTTCTTCACCATA+AGG | - | chr4_2:68529536-68529555 | None:intergenic | 40.0% |
| !!! | GGTCCACTTTTTGCAATTCT+TGG | + | chr4_2:68529566-68529585 | Msa0617850:CDS | 40.0% |
| GAATTAGCTACAACATTCCC+TGG | + | chr4_2:68529641-68529660 | Msa0617850:CDS | 40.0% | |
| TAACAAACCCACCATTTCCA+GGG | - | chr4_2:68529661-68529680 | None:intergenic | 40.0% | |
| ATAACAAACCCACCATTTCC+AGG | - | chr4_2:68529662-68529681 | None:intergenic | 40.0% | |
| ! | GAAGCTTTTGGTCCATTTTG+GGG | + | chr4_2:68529692-68529711 | Msa0617850:CDS | 40.0% |
| ! | AAGCTTTTGGTCCATTTTGG+GGG | + | chr4_2:68529693-68529712 | Msa0617850:CDS | 40.0% |
| ! | GTGATTCCTGTTTTGTCTTC+AGG | + | chr4_2:68529800-68529819 | Msa0617850:CDS | 40.0% |
| GGTAAACCTGAAGACAAAAC+AGG | - | chr4_2:68529809-68529828 | None:intergenic | 40.0% | |
| ! | GGTTATACTGCAGTTGGTTT+AGG | + | chr4_2:68529899-68529918 | Msa0617850:CDS | 40.0% |
| ! | AAGAGGGTGTGGAAAAAGAT+TGG | + | chr4_2:68530005-68530024 | Msa0617850:CDS | 40.0% |
| GATAGTGCTAGTACTTTAGC+TGG | + | chr4_2:68530070-68530089 | Msa0617850:CDS | 40.0% | |
| CCAGCAAAAAGCAAAGCTTT+AGG | - | chr4_2:68530124-68530143 | None:intergenic | 40.0% | |
| !!! | CCTAAAGCTTTGCTTTTTGC+TGG | + | chr4_2:68530121-68530140 | Msa0617850:CDS | 40.0% |
| ! | ATTCCTTTGTTGGCTACTAC+CGG | + | chr4_2:68530169-68530188 | Msa0617850:CDS | 40.0% |
| ! | TGCCACTTGATCAAGAAGTT+TGG | + | chr4_2:68530197-68530216 | Msa0617850:CDS | 40.0% |
| GCCACTTGATCAAGAAGTTT+GGG | + | chr4_2:68530198-68530217 | Msa0617850:CDS | 40.0% | |
| ACCCAAACTTCTTGATCAAG+TGG | - | chr4_2:68530202-68530221 | None:intergenic | 40.0% | |
| CTTGATCAAGAAGTTTGGGT+TGG | + | chr4_2:68530202-68530221 | Msa0617850:CDS | 40.0% | |
| !! | ATCAAGAAGTTTGGGTTGGT+GGG | + | chr4_2:68530206-68530225 | Msa0617850:CDS | 40.0% |
| CAAAGTGGTTTAACACACCT+TGG | + | chr4_2:68530401-68530420 | Msa0617850:CDS | 40.0% | |
| ! | TTTTGTTCCATCTGTGCTGT+TGG | + | chr4_2:68530624-68530643 | Msa0617850:CDS | 40.0% |
| ACATAAACCAACAGCACAGA+TGG | - | chr4_2:68530634-68530653 | None:intergenic | 40.0% | |
| TCTGCAGTTAAAAGAGCCTC+TGG | - | chr4_2:68529623-68529642 | None:intergenic | 45.0% | |
| GCTACAACATTCCCTGGAAA+TGG | + | chr4_2:68529647-68529666 | Msa0617850:CDS | 45.0% | |
| ACAACATTCCCTGGAAATGG+TGG | + | chr4_2:68529650-68529669 | Msa0617850:CDS | 45.0% | |
| CAACATTCCCTGGAAATGGT+GGG | + | chr4_2:68529651-68529670 | Msa0617850:CDS | 45.0% | |
| !! | TCCATTTTGGGGGTCTCTTA+TGG | + | chr4_2:68529703-68529722 | Msa0617850:CDS | 45.0% |
| !! | CCATTTTGGGGGTCTCTTAT+GGG | + | chr4_2:68529704-68529723 | Msa0617850:CDS | 45.0% |
| ! | AAGTTTAGGACAAGAGGGTG+TGG | + | chr4_2:68529994-68530013 | Msa0617850:CDS | 45.0% |
| ! | TTCCTTTGTTGGCTACTACC+GGG | + | chr4_2:68530170-68530189 | Msa0617850:CDS | 45.0% |
| !! | GATCAAGAAGTTTGGGTTGG+TGG | + | chr4_2:68530205-68530224 | Msa0617850:CDS | 45.0% |
| !! | TGGTGGGTATTTTGCACATG+TGG | + | chr4_2:68530222-68530241 | Msa0617850:CDS | 45.0% |
| !! | ATGTGGCTGGTTTGATTGCT+GGG | + | chr4_2:68530239-68530258 | Msa0617850:CDS | 45.0% |
| ! | CTGGTTTGATTGCTGGGAAT+TGG | + | chr4_2:68530245-68530264 | Msa0617850:CDS | 45.0% |
| GTGGTTTAACACACCTTGGA+TGG | + | chr4_2:68530405-68530424 | Msa0617850:CDS | 45.0% | |
| CGACCTTATAAGGTTCCACT+TGG | + | chr4_2:68530577-68530596 | Msa0617850:CDS | 45.0% | |
| TCTGCAGTTAAAAGAGCCTC+TGG | - | chr4_2:68529623-68529642 | None:intergenic | 45.0% | |
| GCTACAACATTCCCTGGAAA+TGG | + | chr4_2:68529647-68529666 | Msa0617850:CDS | 45.0% | |
| ACAACATTCCCTGGAAATGG+TGG | + | chr4_2:68529650-68529669 | Msa0617850:CDS | 45.0% | |
| CAACATTCCCTGGAAATGGT+GGG | + | chr4_2:68529651-68529670 | Msa0617850:CDS | 45.0% | |
| !! | TCCATTTTGGGGGTCTCTTA+TGG | + | chr4_2:68529703-68529722 | Msa0617850:CDS | 45.0% |
| !! | CCATTTTGGGGGTCTCTTAT+GGG | + | chr4_2:68529704-68529723 | Msa0617850:CDS | 45.0% |
| ! | AAGTTTAGGACAAGAGGGTG+TGG | + | chr4_2:68529994-68530013 | Msa0617850:CDS | 45.0% |
| ! | TTCCTTTGTTGGCTACTACC+GGG | + | chr4_2:68530170-68530189 | Msa0617850:CDS | 45.0% |
| !! | GATCAAGAAGTTTGGGTTGG+TGG | + | chr4_2:68530205-68530224 | Msa0617850:CDS | 45.0% |
| !! | TGGTGGGTATTTTGCACATG+TGG | + | chr4_2:68530222-68530241 | Msa0617850:CDS | 45.0% |
| !! | ATGTGGCTGGTTTGATTGCT+GGG | + | chr4_2:68530239-68530258 | Msa0617850:CDS | 45.0% |
| ! | CTGGTTTGATTGCTGGGAAT+TGG | + | chr4_2:68530245-68530264 | Msa0617850:CDS | 45.0% |
| GTGGTTTAACACACCTTGGA+TGG | + | chr4_2:68530405-68530424 | Msa0617850:CDS | 45.0% | |
| CGACCTTATAAGGTTCCACT+TGG | + | chr4_2:68530577-68530596 | Msa0617850:CDS | 45.0% | |
| ! | GAGGTATCTGGTGGACCTTA+TGG | + | chr4_2:68529518-68529537 | Msa0617850:CDS | 50.0% |
| ! | GAAGCAACAGTAAGTGCTGC+AGG | + | chr4_2:68529545-68529564 | Msa0617850:CDS | 50.0% |
| CCCATAAGAGACCCCCAAAA+TGG | - | chr4_2:68529707-68529726 | None:intergenic | 50.0% | |
| GGGGGTCTCTTATGGGATAT+TGG | + | chr4_2:68529711-68529730 | Msa0617850:CDS | 50.0% | |
| ! | TCCTTTGTTGGCTACTACCG+GGG | + | chr4_2:68530171-68530190 | Msa0617850:CDS | 50.0% |
| TTGATCAAGTGGCATAGCCC+CGG | - | chr4_2:68530191-68530210 | None:intergenic | 50.0% | |
| ! | GGGTATTTTGCACATGTGGC+TGG | + | chr4_2:68530226-68530245 | Msa0617850:CDS | 50.0% |
| !! | CATGTGGCTGGTTTGATTGC+TGG | + | chr4_2:68530238-68530257 | Msa0617850:CDS | 50.0% |
| ! | GAGGTATCTGGTGGACCTTA+TGG | + | chr4_2:68529518-68529537 | Msa0617850:CDS | 50.0% |
| ! | GAAGCAACAGTAAGTGCTGC+AGG | + | chr4_2:68529545-68529564 | Msa0617850:CDS | 50.0% |
| CCCATAAGAGACCCCCAAAA+TGG | - | chr4_2:68529707-68529726 | None:intergenic | 50.0% | |
| GGGGGTCTCTTATGGGATAT+TGG | + | chr4_2:68529711-68529730 | Msa0617850:CDS | 50.0% | |
| ! | TCCTTTGTTGGCTACTACCG+GGG | + | chr4_2:68530171-68530190 | Msa0617850:CDS | 50.0% |
| TTGATCAAGTGGCATAGCCC+CGG | - | chr4_2:68530191-68530210 | None:intergenic | 50.0% | |
| ! | GGGTATTTTGCACATGTGGC+TGG | + | chr4_2:68530226-68530245 | Msa0617850:CDS | 50.0% |
| !! | CATGTGGCTGGTTTGATTGC+TGG | + | chr4_2:68530238-68530257 | Msa0617850:CDS | 50.0% |
| GCCCCGGTAGTAGCCAACAA+AGG | - | chr4_2:68530175-68530194 | None:intergenic | 60.0% | |
| GCCCCGGTAGTAGCCAACAA+AGG | - | chr4_2:68530175-68530194 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 68529365 | 68530813 | 68529365 | ID=Msa0617850;Name=Msa0617850 |
| chr4_2 | mRNA | 68529365 | 68530813 | 68529365 | ID=Msa0617850-mRNA-1;Parent=Msa0617850;Name=Msa0617850-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|-1|0|1|-1|1|1|0|482 |
| chr4_2 | exon | 68529365 | 68530813 | 68529365 | ID=Msa0617850-mRNA-1:exon:19672;Parent=Msa0617850-mRNA-1 |
| chr4_2 | CDS | 68529365 | 68530813 | 68529365 | ID=Msa0617850-mRNA-1:cds;Parent=Msa0617850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
