Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0701930 | XP_003629886.2 | 95.322 | 791 | 23 | 4 | 1 | 791 | 1 | 777 | 0.0 | 1535 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0701930 | sp|Q9Y450|HBS1L_HUMAN | 43.035 | 481 | 263 | 6 | 313 | 788 | 210 | 684 | 1.66e-124 | 391 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0701930 | G7L804 | 95.322 | 791 | 23 | 4 | 1 | 791 | 1 | 777 | 0.0 | 1535 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0701930 | Msa1369490 | 0.833502 | 5.139568e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0701930 | MtrunA17_Chr8g0380091 | 95.880 | 631 | 15 | 1 | 161 | 791 | 85 | 704 | 0.0 | 1219 |
Msa0701930 | MtrunA17_Chr8g0380091 | 89.655 | 87 | 6 | 3 | 1 | 87 | 1 | 84 | 3.34e-29 | 124 |
Msa0701930 | MtrunA17_Chr1g0200071 | 36.259 | 433 | 267 | 6 | 362 | 791 | 7 | 433 | 2.78e-89 | 288 |
Msa0701930 | MtrunA17_Chr1g0200091 | 36.259 | 433 | 267 | 6 | 362 | 791 | 7 | 433 | 2.78e-89 | 288 |
Msa0701930 | MtrunA17_Chr1g0200121 | 36.028 | 433 | 268 | 6 | 362 | 791 | 7 | 433 | 3.73e-89 | 288 |
Msa0701930 | MtrunA17_Chr4g0005781 | 35.748 | 428 | 267 | 5 | 362 | 786 | 7 | 429 | 4.84e-88 | 285 |
Msa0701930 | MtrunA17_Chr6g0458111 | 35.797 | 433 | 269 | 6 | 362 | 791 | 7 | 433 | 7.59e-88 | 285 |
Msa0701930 | MtrunA17_Chr6g0458091 | 35.797 | 433 | 269 | 6 | 362 | 791 | 7 | 433 | 7.59e-88 | 285 |
Msa0701930 | MtrunA17_Chr6g0483121 | 34.722 | 504 | 299 | 12 | 300 | 784 | 21 | 513 | 2.13e-84 | 278 |
Msa0701930 | MtrunA17_Chr1g0156421 | 35.129 | 427 | 269 | 5 | 363 | 786 | 8 | 429 | 3.85e-81 | 267 |
Msa0701930 | MtrunA17_Chr1g0193591 | 35.253 | 434 | 272 | 6 | 361 | 791 | 6 | 433 | 7.03e-81 | 266 |
Msa0701930 | MtrunA17_Chr8g0392641 | 38.051 | 431 | 253 | 9 | 363 | 786 | 147 | 570 | 1.48e-77 | 261 |
Msa0701930 | MtrunA17_Chr8g0340771 | 34.579 | 428 | 272 | 5 | 363 | 786 | 8 | 431 | 5.97e-77 | 256 |
Msa0701930 | MtrunA17_Chr1g0150331 | 33.860 | 443 | 241 | 10 | 362 | 791 | 7 | 410 | 4.05e-76 | 253 |
Msa0701930 | MtrunA17_Chr1g0204031 | 36.364 | 429 | 260 | 7 | 361 | 786 | 6 | 424 | 5.40e-76 | 264 |
Msa0701930 | MtrunA17_Chr8g0336511 | 41.026 | 312 | 177 | 4 | 365 | 674 | 76 | 382 | 6.94e-69 | 232 |
Msa0701930 | MtrunA17_Chr5g0415391 | 33.588 | 393 | 253 | 5 | 394 | 783 | 1 | 388 | 1.29e-61 | 213 |
Msa0701930 | MtrunA17_Chr2g0318291 | 43.636 | 220 | 119 | 3 | 362 | 580 | 9 | 224 | 6.84e-55 | 188 |
Msa0701930 | MtrunA17_Chr8g0340371 | 39.749 | 239 | 135 | 4 | 362 | 597 | 7 | 239 | 1.72e-50 | 177 |
Msa0701930 | MtrunA17_Chr1g0196251 | 29.975 | 407 | 245 | 7 | 355 | 755 | 1 | 373 | 2.59e-50 | 181 |
Msa0701930 | MtrunA17_Chr1g0204041 | 49.664 | 149 | 74 | 1 | 363 | 511 | 8 | 155 | 1.71e-42 | 152 |
Msa0701930 | MtrunA17_Chr1g0156411 | 51.079 | 139 | 67 | 1 | 363 | 501 | 12 | 149 | 1.01e-39 | 143 |
Msa0701930 | MtrunA17_Chr2g0319341 | 29.940 | 334 | 220 | 7 | 457 | 783 | 1 | 327 | 6.57e-39 | 150 |
Msa0701930 | MtrunA17_Chr7g0259481 | 28.986 | 483 | 277 | 18 | 316 | 787 | 21 | 448 | 2.09e-33 | 134 |
Msa0701930 | MtrunA17_Chr3g0116821 | 28.989 | 445 | 251 | 16 | 362 | 788 | 92 | 489 | 5.81e-32 | 130 |
Msa0701930 | MtrunA17_Chr2g0298371 | 27.273 | 330 | 213 | 6 | 457 | 781 | 1 | 308 | 4.08e-28 | 115 |
Msa0701930 | MtrunA17_Chr2g0287231 | 30.041 | 243 | 132 | 6 | 362 | 599 | 16 | 225 | 3.27e-25 | 105 |
Msa0701930 | MtrunA17_Chr8g0341021 | 43.878 | 98 | 55 | 0 | 362 | 459 | 8 | 105 | 1.16e-23 | 96.3 |
Msa0701930 | MtrunA17_Chr2g0298381 | 47.826 | 92 | 48 | 0 | 363 | 454 | 8 | 99 | 2.18e-23 | 95.5 |
Msa0701930 | MtrunA17_Chr1g0211481 | 40.230 | 87 | 52 | 0 | 362 | 448 | 6 | 92 | 4.54e-16 | 74.3 |
Msa0701930 | MtrunA17_Chr2g0319351 | 46.667 | 75 | 40 | 0 | 358 | 432 | 3 | 77 | 7.09e-16 | 73.2 |
Msa0701930 | MtrunA17_Chr4g0040791 | 26.119 | 268 | 157 | 8 | 364 | 624 | 59 | 292 | 5.48e-12 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0701930 | AT5G10630.3 | 55.941 | 749 | 268 | 11 | 44 | 789 | 48 | 737 | 0.0 | 810 |
Msa0701930 | AT5G10630.4 | 55.260 | 751 | 275 | 10 | 44 | 789 | 48 | 742 | 0.0 | 806 |
Msa0701930 | AT5G10630.1 | 58.768 | 633 | 206 | 7 | 159 | 789 | 87 | 666 | 0.0 | 731 |
Msa0701930 | AT5G10630.5 | 58.768 | 633 | 206 | 7 | 159 | 789 | 88 | 667 | 0.0 | 731 |
Msa0701930 | AT5G10630.2 | 58.768 | 633 | 206 | 7 | 159 | 789 | 88 | 667 | 0.0 | 731 |
Msa0701930 | AT1G07920.1 | 36.215 | 428 | 265 | 5 | 362 | 786 | 7 | 429 | 3.27e-87 | 283 |
Msa0701930 | AT1G07940.4 | 36.215 | 428 | 265 | 5 | 362 | 786 | 7 | 429 | 3.27e-87 | 283 |
Msa0701930 | AT1G07940.1 | 36.215 | 428 | 265 | 5 | 362 | 786 | 7 | 429 | 3.27e-87 | 283 |
Msa0701930 | AT1G07940.2 | 36.215 | 428 | 265 | 5 | 362 | 786 | 7 | 429 | 3.27e-87 | 283 |
Msa0701930 | AT1G07940.3 | 36.215 | 428 | 265 | 5 | 362 | 786 | 7 | 429 | 3.27e-87 | 283 |
Msa0701930 | AT5G60390.3 | 36.215 | 428 | 265 | 5 | 362 | 786 | 7 | 429 | 3.27e-87 | 283 |
Msa0701930 | AT5G60390.1 | 36.215 | 428 | 265 | 5 | 362 | 786 | 7 | 429 | 3.27e-87 | 283 |
Msa0701930 | AT5G60390.2 | 36.215 | 428 | 265 | 5 | 362 | 786 | 7 | 429 | 3.27e-87 | 283 |
Msa0701930 | AT1G07930.1 | 36.215 | 428 | 265 | 5 | 362 | 786 | 7 | 429 | 3.27e-87 | 283 |
Msa0701930 | AT1G18070.1 | 36.047 | 430 | 265 | 7 | 363 | 787 | 102 | 526 | 3.62e-81 | 270 |
Msa0701930 | AT1G18070.2 | 36.047 | 430 | 265 | 7 | 363 | 787 | 102 | 526 | 3.62e-81 | 270 |
Msa0701930 | AT1G18070.3 | 35.147 | 441 | 265 | 8 | 363 | 787 | 102 | 537 | 1.06e-77 | 261 |
Msa0701930 | AT1G07930.2 | 45.161 | 248 | 130 | 3 | 362 | 607 | 7 | 250 | 3.20e-67 | 228 |
Msa0701930 | AT4G20360.1 | 28.315 | 445 | 254 | 16 | 362 | 788 | 79 | 476 | 2.90e-35 | 140 |
Msa0701930 | AT4G20360.2 | 28.315 | 445 | 254 | 16 | 362 | 788 | 79 | 476 | 2.90e-35 | 140 |
Msa0701930 | AT4G02930.1 | 28.604 | 437 | 251 | 15 | 362 | 787 | 67 | 453 | 3.34e-30 | 125 |
Msa0701930 | AT2G31060.2 | 26.619 | 278 | 165 | 7 | 353 | 624 | 50 | 294 | 1.69e-15 | 81.3 |
Msa0701930 | AT2G31060.3 | 26.950 | 282 | 163 | 8 | 353 | 624 | 50 | 298 | 2.30e-15 | 80.9 |
Msa0701930 | AT2G45030.1 | 31.977 | 172 | 94 | 7 | 341 | 512 | 48 | 196 | 1.84e-11 | 68.2 |
Msa0701930 | AT1G45332.1 | 32.335 | 167 | 90 | 7 | 346 | 512 | 53 | 196 | 2.00e-11 | 68.2 |
Msa0701930 | AT5G13650.1 | 27.899 | 276 | 151 | 11 | 364 | 630 | 84 | 320 | 6.23e-11 | 66.6 |
Msa0701930 | AT5G13650.2 | 27.899 | 276 | 151 | 11 | 364 | 630 | 85 | 321 | 6.40e-11 | 66.6 |
Find 194 sgRNAs with CRISPR-Local
Find 551 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGCCTACATTCTTCAAAAT+TGG | 0.138581 | 4_4:-73372247 | Msa0701930:CDS |
TTTATCCCAAACATGATTTC+TGG | 0.174281 | 4_4:-73371120 | Msa0701930:CDS |
TGAATCGGGAAGCGAATATT+AGG | 0.230338 | 4_4:+73374964 | None:intergenic |
TGGAAATATCACAACCTCTT+TGG | 0.241546 | 4_4:+73372908 | None:intergenic |
TATAAAATCAAATCGGTCTT+TGG | 0.261931 | 4_4:+73370927 | None:intergenic |
CCAAACTCCAGGTGGCTTAA+TGG | 0.264147 | 4_4:+73374558 | None:intergenic |
ATGGTCTCTTTCTTTGTATC+AGG | 0.265545 | 4_4:+73374577 | None:intergenic |
GGTAAAACCTAATTGGTCTA+TGG | 0.273561 | 4_4:+73374854 | None:intergenic |
TTGTTCTTCCTAAAGATCTA+AGG | 0.277201 | 4_4:+73367478 | None:intergenic |
TGCCATGGAAAATCAAAATT+TGG | 0.281045 | 4_4:-73370833 | Msa0701930:CDS |
TAGGTTGGTCATGTTGATTC+TGG | 0.286553 | 4_4:-73371469 | Msa0701930:CDS |
AATTAATCCATAGACCAATT+AGG | 0.304473 | 4_4:-73374861 | Msa0701930:five_prime_UTR |
CCATTAAGCCACCTGGAGTT+TGG | 0.317368 | 4_4:-73374558 | Msa0701930:CDS |
GGAAATATCACAACCTCTTT+GGG | 0.319630 | 4_4:+73372909 | None:intergenic |
TGGTAGGTTATTACACCTAT+TGG | 0.325002 | 4_4:-73371431 | Msa0701930:CDS |
TTATCACTCTCTTCAACTTT+TGG | 0.331231 | 4_4:+73371774 | None:intergenic |
AGAGTATCCCTTAGATCTTT+AGG | 0.333295 | 4_4:-73367486 | Msa0701930:CDS |
CCCTCAACCTATCTGTCTTC+AGG | 0.341132 | 4_4:-73372207 | Msa0701930:CDS |
GGTGTCTGCTTGTGGGAAAC+TGG | 0.341397 | 4_4:-73369013 | Msa0701930:CDS |
TAATTCTTGTTGAGCTTCTC+TGG | 0.348361 | 4_4:-73367301 | Msa0701930:three_prime_UTR |
GATGGAAAACAGATGTTTAC+TGG | 0.353038 | 4_4:+73367356 | None:intergenic |
TGAAAAGGAGGCCAAGTTAC+AGG | 0.354078 | 4_4:-73371377 | Msa0701930:intron |
CACCTGAGCACCGATCAATA+TGG | 0.355017 | 4_4:+73367883 | None:intergenic |
TATTCCCCTTTCCCTTTCTT+CGG | 0.355806 | 4_4:+73371221 | None:intergenic |
TCTGGAAAATCAACACTATC+TGG | 0.356467 | 4_4:-73371451 | Msa0701930:CDS |
TTGGTCACCTTACCAGTCTT+GGG | 0.356517 | 4_4:+73367717 | None:intergenic |
TCATTGTGAAACAGGTATAC+TGG | 0.358470 | 4_4:-73369144 | Msa0701930:intron |
TTTGGTCACCTTACCAGTCT+TGG | 0.360911 | 4_4:+73367716 | None:intergenic |
GCACAACTTATTAGAAGTTT+CGG | 0.362581 | 4_4:-73371000 | Msa0701930:CDS |
AAATGCTTTGCAACTGCAAC+AGG | 0.363737 | 4_4:+73367941 | None:intergenic |
TGTTGCAGTTGCAAAGCATT+TGG | 0.363927 | 4_4:-73367939 | Msa0701930:CDS |
AGAAGAAGGTGGGGTTTGAT+TGG | 0.367458 | 4_4:+73374930 | None:intergenic |
GCATAGTTTCCTTTGTCCTT+TGG | 0.368485 | 4_4:+73371876 | None:intergenic |
GAAGTTGAATCTGAAAATTA+TGG | 0.370235 | 4_4:-73374713 | Msa0701930:intron |
TAGTAGAAGAAACTTGTAGT+AGG | 0.374301 | 4_4:-73375034 | Msa0701930:five_prime_UTR |
TCAAAGATTCTTCTCTCTCA+TGG | 0.378500 | 4_4:-73370867 | Msa0701930:CDS |
AGCTATCTATGATACATATA+TGG | 0.378574 | 4_4:+73367208 | None:intergenic |
GATTTGATAACATCACATAT+TGG | 0.379852 | 4_4:+73369051 | None:intergenic |
TCTATTCTAGCTAAAGTAGA+TGG | 0.383472 | 4_4:+73367338 | None:intergenic |
ATGCCGCGTAAAGTAAACTA+TGG | 0.383974 | 4_4:-73374785 | Msa0701930:CDS |
AGTCTTGGGTAAAACCTAAT+TGG | 0.384317 | 4_4:+73374847 | None:intergenic |
GGCCTACATTCTTCAAAATT+GGG | 0.384535 | 4_4:-73372246 | Msa0701930:CDS |
CCAGTATGAACCACATCATC+TGG | 0.394923 | 4_4:+73372267 | None:intergenic |
GTGAAGACCTATATTTAAAG+AGG | 0.395003 | 4_4:+73372779 | None:intergenic |
TTGGTTAATTAAATCTGAAT+CGG | 0.395124 | 4_4:+73374949 | None:intergenic |
GAACAACATACATGGTATAC+AGG | 0.395720 | 4_4:+73367378 | None:intergenic |
GTTGTCTGCACTTTCAGTAT+TGG | 0.398903 | 4_4:+73371995 | None:intergenic |
AGAATTTCATGAAATTCATA+AGG | 0.403160 | 4_4:-73372823 | Msa0701930:CDS |
CCAGATGATGTGGTTCATAC+TGG | 0.403541 | 4_4:-73372267 | Msa0701930:CDS |
TTGACTTGCTGTGATATTTG+TGG | 0.411577 | 4_4:-73374499 | Msa0701930:CDS |
GGTAGGTTATTACACCTATT+GGG | 0.413223 | 4_4:-73371430 | Msa0701930:CDS |
AAGGATCCTTTGCTTATGCT+TGG | 0.413794 | 4_4:-73371260 | Msa0701930:CDS |
TAAAGTACAAATGGTTTGGT+TGG | 0.415582 | 4_4:-73375066 | Msa0701930:five_prime_UTR |
AATCTAAAGTACAAATGGTT+TGG | 0.417184 | 4_4:-73375070 | Msa0701930:five_prime_UTR |
CAAGCTCTCGTCATTGTCAT+AGG | 0.419233 | 4_4:+73374519 | None:intergenic |
AGGATCCTTTGCTTATGCTT+GGG | 0.420061 | 4_4:-73371259 | Msa0701930:CDS |
GTAGCTCCAGAAATCATGTT+TGG | 0.427200 | 4_4:+73371114 | None:intergenic |
TCTTGGAAATTCGTCCCAAT+AGG | 0.427436 | 4_4:+73371416 | None:intergenic |
TATACTGGACCTTATCTGTT+AGG | 0.427875 | 4_4:-73369129 | Msa0701930:CDS |
GCCTGCTCTGTTGCAAGAGC+TGG | 0.427988 | 4_4:-73368043 | Msa0701930:CDS |
GTTGTTGTGCTTGACTCTCC+TGG | 0.435036 | 4_4:-73371153 | Msa0701930:CDS |
AACTGTGTGGTTAAAACTGC+TGG | 0.439302 | 4_4:+73371707 | None:intergenic |
ACCTGAGCACCGATCAATAT+GGG | 0.441190 | 4_4:+73367884 | None:intergenic |
GTTATGCCTTCAGATGTTGT+TGG | 0.441394 | 4_4:-73368097 | Msa0701930:CDS |
GAATTTCATGAAATTCTCCT+TGG | 0.443794 | 4_4:+73372829 | None:intergenic |
TGGCGTTCTACGTCATCCCT+TGG | 0.445519 | 4_4:-73374479 | Msa0701930:CDS |
GAAATTGATCTCGAAACAAT+TGG | 0.448800 | 4_4:-73371930 | Msa0701930:CDS |
CGTCATCCCTTGGTTATCAA+TGG | 0.450703 | 4_4:-73374469 | Msa0701930:CDS |
TCCCATATTGATCGGTGCTC+AGG | 0.457056 | 4_4:-73367885 | Msa0701930:intron |
GAACTTTGAGATCTTGCATC+AGG | 0.458431 | 4_4:+73371684 | None:intergenic |
ACCTCCAACATCAACAAAAC+AGG | 0.463396 | 4_4:-73374442 | Msa0701930:intron |
CTTGTTATAGATGCCTCACT+TGG | 0.468135 | 4_4:-73371072 | Msa0701930:CDS |
GGAGTTGAAATTGCTTGTCT+TGG | 0.469748 | 4_4:-73367918 | Msa0701930:CDS |
AGACAAATCTAAAGTACAAA+TGG | 0.470127 | 4_4:-73375075 | Msa0701930:five_prime_UTR |
AGTAGAAGAAACTTGTAGTA+GGG | 0.470361 | 4_4:-73375033 | Msa0701930:five_prime_UTR |
TGGTTAATTAAATCTGAATC+GGG | 0.471055 | 4_4:+73374950 | None:intergenic |
TAAGCAGTTAACAGAGTCTT+GGG | 0.472195 | 4_4:+73374833 | None:intergenic |
TAGCTCCAGAAATCATGTTT+GGG | 0.472643 | 4_4:+73371115 | None:intergenic |
TTGATGAAAGTTCCGAAGAA+AGG | 0.474986 | 4_4:-73371233 | Msa0701930:CDS |
CGGTGAAATTACCTGTAACT+TGG | 0.479336 | 4_4:+73371366 | None:intergenic |
GCAACTGCAACAGGAAAGTC+AGG | 0.482006 | 4_4:+73367950 | None:intergenic |
GCCTGAAGACAGATAGGTTG+AGG | 0.483421 | 4_4:+73372206 | None:intergenic |
TCACTTGGTGCATTTGAAGC+TGG | 0.485978 | 4_4:-73371057 | Msa0701930:CDS |
AGCCATCCCTCTTTAAATAT+AGG | 0.486162 | 4_4:-73372786 | Msa0701930:intron |
TTCTGATAATACTAATGCTA+AGG | 0.487271 | 4_4:-73371664 | Msa0701930:CDS |
GAATCGGGAAGCGAATATTA+GGG | 0.487500 | 4_4:+73374965 | None:intergenic |
TTAGGAAGAACAATAGCTGT+TGG | 0.488448 | 4_4:-73367468 | Msa0701930:CDS |
GTAACGTTGCATGGTGTTGA+TGG | 0.492360 | 4_4:-73368007 | Msa0701930:CDS |
GAAGATATAAACAAAACTCC+TGG | 0.493719 | 4_4:-73372981 | Msa0701930:CDS |
GATGTCTTATAAAATCAAAT+CGG | 0.494118 | 4_4:+73370920 | None:intergenic |
TGATGAAAGTTCCGAAGAAA+GGG | 0.495673 | 4_4:-73371232 | Msa0701930:CDS |
TGGTGCATTTGAAGCTGGTA+TGG | 0.496309 | 4_4:-73371052 | Msa0701930:CDS |
AAGGACAGGTGTCTGCTTGT+GGG | 0.496837 | 4_4:-73369020 | Msa0701930:CDS |
ACATGTGAATTATGTAAAGA+TGG | 0.497583 | 4_4:-73367275 | Msa0701930:three_prime_UTR |
GTTACAGCCTGAAGACAGAT+AGG | 0.502890 | 4_4:+73372200 | None:intergenic |
TGAAAAGATGAGAAGAAGGT+GGG | 0.503608 | 4_4:+73374920 | None:intergenic |
TTGAAATTGCTTGTCTTGGA+TGG | 0.504009 | 4_4:-73367914 | Msa0701930:CDS |
TCTTCAAAATTGGGTTTGAA+AGG | 0.509780 | 4_4:-73372237 | Msa0701930:CDS |
TTTCTTACCAGCCAGAAAAG+TGG | 0.510046 | 4_4:-73371626 | Msa0701930:CDS |
TCCAGCTCTTGCAACAGAGC+AGG | 0.514025 | 4_4:+73368042 | None:intergenic |
TTACTACGACGATGACTATG+AGG | 0.515875 | 4_4:-73374756 | Msa0701930:CDS |
CAAATCAACTGCACAAGGAC+AGG | 0.517566 | 4_4:-73369034 | Msa0701930:CDS |
ATAAGCAGTTAACAGAGTCT+TGG | 0.518813 | 4_4:+73374832 | None:intergenic |
TATAGTTGCAGTAAATAAGA+TGG | 0.519968 | 4_4:-73370965 | Msa0701930:CDS |
AAAACAAAGTGCAGTAATTG+AGG | 0.522478 | 4_4:-73367670 | Msa0701930:intron |
AATAACCATGACAGTGGCTG+TGG | 0.522889 | 4_4:-73371202 | Msa0701930:CDS |
GCTGGTATGGATGGCGGCAA+AGG | 0.523737 | 4_4:-73371039 | Msa0701930:CDS |
CCTGAAGACAGATAGGTTGA+GGG | 0.527815 | 4_4:+73372207 | None:intergenic |
GACCTATATTTAAAGAGGGA+TGG | 0.530219 | 4_4:+73372784 | None:intergenic |
TGGGCCAACTTGGATGCTCC+AGG | 0.530831 | 4_4:+73372963 | None:intergenic |
TGTTGATGGAAGTCTTGTAT+TGG | 0.530937 | 4_4:-73367993 | Msa0701930:CDS |
GGAATGTTTCTCCGCTCATG+TGG | 0.531170 | 4_4:-73370892 | Msa0701930:CDS |
ACCTCTTTGGGACTCTGTTG+TGG | 0.535011 | 4_4:+73372921 | None:intergenic |
GATGGAAGTCTTGTATTGGC+TGG | 0.535690 | 4_4:-73367989 | Msa0701930:CDS |
TGTTCTTCCTAAAGATCTAA+GGG | 0.536816 | 4_4:+73367479 | None:intergenic |
CAATCAAGCAAAGAAAAGTC+CGG | 0.537201 | 4_4:-73371813 | Msa0701930:CDS |
CAGTATGAACCACATCATCT+GGG | 0.538586 | 4_4:+73372268 | None:intergenic |
GCTTGTGGGAAACTGGAAGC+AGG | 0.540683 | 4_4:-73369006 | Msa0701930:CDS |
AATATTCTTGAAACTCTAGC+AGG | 0.541627 | 4_4:+73367753 | None:intergenic |
GAATTGAAAAGATGAGAAGA+AGG | 0.542714 | 4_4:+73374916 | None:intergenic |
CGGGAAGCGAATATTAGGGT+TGG | 0.549747 | 4_4:+73374969 | None:intergenic |
GATGGAACATCAAACTTGAA+AGG | 0.555871 | 4_4:+73372291 | None:intergenic |
TCTGATAATACTAATGCTAA+GGG | 0.556699 | 4_4:-73371663 | Msa0701930:CDS |
TCAGTACTTGATCCCAAGAC+TGG | 0.558515 | 4_4:-73367729 | Msa0701930:CDS |
GGGATAAAATCTTTATGACC+AGG | 0.560214 | 4_4:+73371135 | None:intergenic |
TTTGCGAATTCTCTAGTAGG+AGG | 0.562911 | 4_4:+73369087 | None:intergenic |
TTGAAAAGATGAGAAGAAGG+TGG | 0.562911 | 4_4:+73374919 | None:intergenic |
CAAGGACAGGTGTCTGCTTG+TGG | 0.563524 | 4_4:-73369021 | Msa0701930:CDS |
CTCTCCAATGTCATCACTGT+CGG | 0.565413 | 4_4:+73367405 | None:intergenic |
ATGGATTCCCTTGAGTGCCA+TGG | 0.565826 | 4_4:-73370848 | Msa0701930:CDS |
GAAGAAACTTGTAGTAGGGA+TGG | 0.567030 | 4_4:-73375029 | Msa0701930:five_prime_UTR |
TGGAGTTAAACAAGTATGAT+CGG | 0.570030 | 4_4:+73374989 | None:intergenic |
ATAGAGCAACTCCAAACTCC+AGG | 0.571736 | 4_4:+73374547 | None:intergenic |
TGAAGACCTATATTTAAAGA+GGG | 0.572542 | 4_4:+73372780 | None:intergenic |
AAAGTTCCGAAGAAAGGGAA+AGG | 0.572545 | 4_4:-73371227 | Msa0701930:CDS |
GCATTTGAAGCTGGTATGGA+TGG | 0.575093 | 4_4:-73371048 | Msa0701930:CDS |
AAGTTCCGAAGAAAGGGAAA+GGG | 0.576526 | 4_4:-73371226 | Msa0701930:CDS |
GAAAATCAACACTATCTGGT+AGG | 0.578600 | 4_4:-73371447 | Msa0701930:CDS |
TGGTAGTGCAGACAAACTAC+CGG | 0.582720 | 4_4:+73371794 | None:intergenic |
TCAACTGCACCTAACAGATA+AGG | 0.583815 | 4_4:+73369120 | None:intergenic |
AACTCCTGGAGCATCCAAGT+TGG | 0.584320 | 4_4:-73372967 | Msa0701930:CDS |
AGTTTGTCTTCTAACAAAGA+CGG | 0.587145 | 4_4:-73371747 | Msa0701930:CDS |
ACTTGATCCCAAGACTGGTA+AGG | 0.592506 | 4_4:-73367724 | Msa0701930:CDS |
GAATGTTTCTCCGCTCATGT+GGG | 0.593120 | 4_4:-73370891 | Msa0701930:CDS |
TGTTCCATCCCCAGATGATG+TGG | 0.594773 | 4_4:-73372277 | Msa0701930:CDS |
TGTTGGAACAGTACGTACAT+TGG | 0.595815 | 4_4:-73368080 | Msa0701930:CDS |
TCACATATTGGCATTAGCAG+AGG | 0.599164 | 4_4:+73369063 | None:intergenic |
AAAGAGACCATTAAGCCACC+TGG | 0.599671 | 4_4:-73374565 | Msa0701930:CDS |
GAAAACTCTACCACACAGAC+TGG | 0.600136 | 4_4:+73367528 | None:intergenic |
CTTATCAGCATCTTTGCCAA+AGG | 0.600455 | 4_4:-73371892 | Msa0701930:CDS |
TGTAGTAGGGATGGCAATGT+CGG | 0.601467 | 4_4:-73375020 | Msa0701930:five_prime_UTR |
AGCTTCAAATGCACCAAGTG+AGG | 0.601580 | 4_4:+73371059 | None:intergenic |
TACAAGCTTGAGAATGTCCA+AGG | 0.604749 | 4_4:-73372846 | Msa0701930:CDS |
CTGCAACAGGAAAGTCAGGA+TGG | 0.610280 | 4_4:+73367954 | None:intergenic |
AATGTAGCTGTAACGTTGCA+TGG | 0.611588 | 4_4:-73368016 | Msa0701930:CDS |
GGTACAAGTCCCATATTGAT+CGG | 0.612336 | 4_4:-73367893 | Msa0701930:CDS |
ATATTTCCAATGCAAGACGT+TGG | 0.614432 | 4_4:-73372894 | Msa0701930:CDS |
ACTGTTCCAACAACATCTGA+AGG | 0.615264 | 4_4:+73368091 | None:intergenic |
GTTTACTGGAACAACATACA+TGG | 0.617374 | 4_4:+73367370 | None:intergenic |
GAAGCAGGAGCTCTTCGAAG+TGG | 0.618457 | 4_4:-73368991 | Msa0701930:CDS |
CTTATACCAAACTCATTCGA+CGG | 0.618581 | 4_4:-73374814 | Msa0701930:five_prime_UTR |
GTGGTTCCATTGATAACCAA+GGG | 0.621078 | 4_4:+73374463 | None:intergenic |
ATATGCCACAGCCACTGTCA+TGG | 0.621453 | 4_4:+73371197 | None:intergenic |
TATTTACTGCAACTATAACA+TGG | 0.621754 | 4_4:+73370971 | None:intergenic |
GAAAAGATGAGAAGAAGGTG+GGG | 0.621861 | 4_4:+73374921 | None:intergenic |
GCATCTTTGCCAAAGGACAA+AGG | 0.623123 | 4_4:-73371885 | Msa0701930:CDS |
AGTTCCGAAGAAAGGGAAAG+GGG | 0.633252 | 4_4:-73371225 | Msa0701930:CDS |
GCCACAACAGAGTCCCAAAG+AGG | 0.634314 | 4_4:-73372922 | Msa0701930:CDS |
ATTCCATAGTTTACTTTACG+CGG | 0.636455 | 4_4:+73374782 | None:intergenic |
TGAACCACATCATCTGGGGA+TGG | 0.637515 | 4_4:+73372273 | None:intergenic |
AACAACATACATGGTATACA+GGG | 0.638847 | 4_4:+73367379 | None:intergenic |
GAAGACAGATAGGTTGAGGG+AGG | 0.639115 | 4_4:+73372210 | None:intergenic |
AATGTATCTTCAGATTGTTG+AGG | 0.644877 | 4_4:+73371597 | None:intergenic |
TTTGAAATGAGCATCAGAAG+GGG | 0.646193 | 4_4:+73370804 | None:intergenic |
TATGCCGACAGTGATGACAT+TGG | 0.648877 | 4_4:-73367409 | Msa0701930:three_prime_UTR |
GGTGGTTCCATTGATAACCA+AGG | 0.649942 | 4_4:+73374462 | None:intergenic |
AATCTTTGAACCCACATGAG+CGG | 0.652547 | 4_4:+73370881 | None:intergenic |
AAGTGCCCAAGCATAAGCAA+AGG | 0.652690 | 4_4:+73371254 | None:intergenic |
TGGTAAGAAACTTGTTGATG+AGG | 0.658411 | 4_4:+73371639 | None:intergenic |
AGCTCTTCGAAGTGGAACAA+AGG | 0.662831 | 4_4:-73368983 | Msa0701930:intron |
AAGACAGATAGGTTGAGGGA+GGG | 0.666145 | 4_4:+73372211 | None:intergenic |
AGGAATGACTTGTTGAACAG+AGG | 0.666904 | 4_4:-73367141 | Msa0701930:three_prime_UTR |
GGAAGTCTTGTATTGGCTGG+AGG | 0.667406 | 4_4:-73367986 | Msa0701930:CDS |
AGTCTAGACTTGTTGAACAG+AGG | 0.675071 | 4_4:-73367161 | Msa0701930:three_prime_UTR |
CGACAGTGATGACATTGGAG+AGG | 0.678192 | 4_4:-73367404 | Msa0701930:three_prime_UTR |
AGTATGAACCACATCATCTG+GGG | 0.679020 | 4_4:+73372269 | None:intergenic |
TTAGCTAGAATAGACAATGG+CGG | 0.694247 | 4_4:-73367329 | Msa0701930:three_prime_UTR |
GAGCAACTCCAAACTCCAGG+TGG | 0.698932 | 4_4:+73374550 | None:intergenic |
ACTTTAGCTAGAATAGACAA+TGG | 0.704196 | 4_4:-73367332 | Msa0701930:three_prime_UTR |
GTTATCAAATCAACTGCACA+AGG | 0.705068 | 4_4:-73369039 | Msa0701930:CDS |
AAGGGGAATAACCATGACAG+TGG | 0.707209 | 4_4:-73371208 | Msa0701930:CDS |
TTTGAAGCTGGTATGGATGG+CGG | 0.707438 | 4_4:-73371045 | Msa0701930:CDS |
TTTGCACGAGCCAGTCTGTG+TGG | 0.717109 | 4_4:-73367538 | Msa0701930:CDS |
ATCTTGCATCAGGAACTGTG+TGG | 0.809595 | 4_4:+73371694 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTTTATTTTAAATTTTT+TGG | - | chr4_4:73373535-73373554 | Msa0701930:intron | 0.0% |
!! | AATTACTATTAATGAATAAA+TGG | + | chr4_4:73367804-73367823 | None:intergenic | 10.0% |
!! | AAAATAAATTCTTCAAAAAA+TGG | - | chr4_4:73370366-73370385 | Msa0701930:intron | 10.0% |
!! | CTAAAGTAAATTATAAAATT+TGG | - | chr4_4:73373730-73373749 | Msa0701930:intron | 10.0% |
!! | TAAATTATAAAATTTGGAAA+AGG | - | chr4_4:73373736-73373755 | Msa0701930:intron | 10.0% |
!!! | TGTTTATTTTTAAATATGAT+GGG | + | chr4_4:73373987-73374006 | None:intergenic | 10.0% |
!!! | ATGTTTATTTTTAAATATGA+TGG | + | chr4_4:73373988-73374007 | None:intergenic | 10.0% |
!! | ATCATATTTAAAAATAAACA+TGG | - | chr4_4:73373987-73374006 | Msa0701930:intron | 10.0% |
!!! | TATTTTTTAATATTGCTTAT+TGG | - | chr4_4:73374374-73374393 | Msa0701930:intron | 10.0% |
!!! | ATTTTTTAATATTGCTTATT+GGG | - | chr4_4:73374375-73374394 | Msa0701930:intron | 10.0% |
!!! | ATTTAATTTAGTTTAGTACT+AGG | - | chr4_4:73367821-73367840 | Msa0701930:intron | 15.0% |
!! | TAAAATGATATAAAATTCGT+GGG | - | chr4_4:73368635-73368654 | Msa0701930:intron | 15.0% |
!! | TCCTTATTAATAAAATAGTT+AGG | - | chr4_4:73369605-73369624 | Msa0701930:intron | 15.0% |
!!! | ACCTAACTATTTTATTAATA+AGG | + | chr4_4:73369609-73369628 | None:intergenic | 15.0% |
!! | TTATTAATAAAATAGTTAGG+TGG | - | chr4_4:73369608-73369627 | Msa0701930:intron | 15.0% |
!! | TTAGAATAAAAGATCTTATT+AGG | - | chr4_4:73369768-73369787 | Msa0701930:intron | 15.0% |
!! | TAAAAATAAATGGTTATGTA+AGG | + | chr4_4:73369864-73369883 | None:intergenic | 15.0% |
!! | CACTATTGTTTAAAAATAAA+TGG | + | chr4_4:73369874-73369893 | None:intergenic | 15.0% |
!! | AACATGAAAAAACTAAATAT+GGG | + | chr4_4:73370083-73370102 | None:intergenic | 15.0% |
!! | AAACATGAAAAAACTAAATA+TGG | + | chr4_4:73370084-73370103 | None:intergenic | 15.0% |
!!! | TAAAAATGTTTTTGAATTGT+TGG | - | chr4_4:73371504-73371523 | Msa0701930:intron | 15.0% |
!!! | TTAGATTTAGAATGATTATT+GGG | + | chr4_4:73372149-73372168 | None:intergenic | 15.0% |
!!! | ATTAGATTTAGAATGATTAT+TGG | + | chr4_4:73372150-73372169 | None:intergenic | 15.0% |
!! | AATAATCATTCTAAATCTAA+TGG | - | chr4_4:73372149-73372168 | Msa0701930:intron | 15.0% |
!!! | CAAAATCTATTTTCTAAATT+GGG | + | chr4_4:73372654-73372673 | None:intergenic | 15.0% |
!! | AACATACTTATAAATCAATA+TGG | + | chr4_4:73372678-73372697 | None:intergenic | 15.0% |
!!! | TGATGTAATTTGTAAATTAA+TGG | + | chr4_4:73373472-73373491 | None:intergenic | 15.0% |
!! | AATTGATACAAAAAAATGAT+CGG | + | chr4_4:73373920-73373939 | None:intergenic | 15.0% |
!! | ATATTAAAAAATAAAGTGCA+GGG | + | chr4_4:73374367-73374386 | None:intergenic | 15.0% |
!! | AATATTAAAAAATAAAGTGC+AGG | + | chr4_4:73374368-73374387 | None:intergenic | 15.0% |
!!! | CAATTTTCTTTTTTCTATAT+TGG | - | chr4_4:73374406-73374425 | Msa0701930:intron | 15.0% |
!!! | AGTTTTTTTTTCTTTCTTTT+TGG | - | chr4_4:73374973-73374992 | Msa0701930:five_prime_UTR | 15.0% |
!! | TTGGTTAATTAAATCTGAAT+CGG | + | chr4_4:73367269-73367288 | None:intergenic | 20.0% |
!! | AACACAATTTACTAATTTGA+CGG | + | chr4_4:73368258-73368277 | None:intergenic | 20.0% |
!!! | TAACTTGTTTTTCATAGTAA+TGG | + | chr4_4:73368607-73368626 | None:intergenic | 20.0% |
!! | GTAAAATGATATAAAATTCG+TGG | - | chr4_4:73368634-73368653 | Msa0701930:intron | 20.0% |
!!! | AGTTAATTATCAATTTTGCT+TGG | + | chr4_4:73369022-73369041 | None:intergenic | 20.0% |
!!! | AAGCAAAATTGATAATTAAC+TGG | - | chr4_4:73369021-73369040 | Msa0701930:CDS | 20.0% |
!! | AGAATTTCATGAAATTCATA+AGG | - | chr4_4:73369392-73369411 | Msa0701930:intron | 20.0% |
!! | AAAAGACATTTAATATGAGA+TGG | + | chr4_4:73369530-73369549 | None:intergenic | 20.0% |
!!! | CTCATATTAAATGTCTTTTA+AGG | - | chr4_4:73369531-73369550 | Msa0701930:intron | 20.0% |
!!! | AGTGATCAAATCTTTTTTAT+TGG | - | chr4_4:73369890-73369909 | Msa0701930:intron | 20.0% |
!!! | TTTTTTTTTGGTTAAAGCTA+GGG | + | chr4_4:73370048-73370067 | None:intergenic | 20.0% |
!!! | TTTTTTTTTTGGTTAAAGCT+AGG | + | chr4_4:73370049-73370068 | None:intergenic | 20.0% |
!!! | GGAAAATCTACTTTTTTTTT+TGG | + | chr4_4:73370060-73370079 | None:intergenic | 20.0% |
!! | ACATGAAAAAACTAAATATG+GGG | + | chr4_4:73370082-73370101 | None:intergenic | 20.0% |
!! | TACATCAATATTTATCCAAA+AGG | + | chr4_4:73370112-73370131 | None:intergenic | 20.0% |
!!! | TTAAAAACTCTAAAGATTCT+CGG | - | chr4_4:73370160-73370179 | Msa0701930:intron | 20.0% |
!! | AAAAAATAAAAATGACTCCA+CGG | + | chr4_4:73370872-73370891 | None:intergenic | 20.0% |
!! | GATGTCTTATAAAATCAAAT+CGG | + | chr4_4:73371298-73371317 | None:intergenic | 20.0% |
!! | AAAAACTTAATTAACCCTAT+AGG | + | chr4_4:73371596-73371615 | None:intergenic | 20.0% |
!!! | TATAGGGTTAATTAAGTTTT+TGG | - | chr4_4:73371595-73371614 | Msa0701930:CDS | 20.0% |
!! | TTAATAGGGTTAATTAAGTA+GGG | + | chr4_4:73371650-73371669 | None:intergenic | 20.0% |
!! | AAAACTTAATTAACCCTATA+GGG | + | chr4_4:73371595-73371614 | None:intergenic | 20.0% |
!! | AAAAACTTAATTAACCCTAT+AGG | + | chr4_4:73371596-73371615 | None:intergenic | 20.0% |
!! | CAAAACTGTGAATATTTATA+GGG | + | chr4_4:73371700-73371719 | None:intergenic | 20.0% |
!! | ACAAAACTGTGAATATTTAT+AGG | + | chr4_4:73371701-73371720 | None:intergenic | 20.0% |
!! | CATAATATATTAACCCTATA+GGG | + | chr4_4:73371746-73371765 | None:intergenic | 20.0% |
!! | TCATAATATATTAACCCTAT+AGG | + | chr4_4:73371747-73371766 | None:intergenic | 20.0% |
!!! | TAATTTTGTTAACGTATCTT+AGG | - | chr4_4:73371911-73371930 | Msa0701930:CDS | 20.0% |
!!! | TAGATTTAGAATGATTATTG+GGG | + | chr4_4:73372148-73372167 | None:intergenic | 20.0% |
!! | TCTAAATCTAATGGTAAAAT+TGG | - | chr4_4:73372158-73372177 | Msa0701930:intron | 20.0% |
!! | TTAACTTAATCTTAGTTTAG+TGG | - | chr4_4:73372264-73372283 | Msa0701930:CDS | 20.0% |
!! | AACTAACACAATTAACAAAA+TGG | + | chr4_4:73372360-73372379 | None:intergenic | 20.0% |
!!! | CCAAAATCTATTTTCTAAAT+TGG | + | chr4_4:73372655-73372674 | None:intergenic | 20.0% |
!!! | CCAATTTAGAAAATAGATTT+TGG | - | chr4_4:73372652-73372671 | Msa0701930:intron | 20.0% |
!! | AATTTACCCAAATCAAAATT+AGG | - | chr4_4:73372930-73372949 | Msa0701930:CDS | 20.0% |
!! | ATTTACCCAAATCAAAATTA+GGG | - | chr4_4:73372931-73372950 | Msa0701930:CDS | 20.0% |
!! | ATTGATACAAAAAAATGATC+GGG | + | chr4_4:73373919-73373938 | None:intergenic | 20.0% |
!!! | AAACTATTTCTTGTAATATG+TGG | - | chr4_4:73374011-73374030 | Msa0701930:intron | 20.0% |
!!! | TTCTATTGTTTCTAATATTC+AGG | - | chr4_4:73374650-73374669 | Msa0701930:intron | 20.0% |
!! | AGACAAATCTAAAGTACAAA+TGG | - | chr4_4:73367140-73367159 | Msa0701930:three_prime_UTR | 25.0% |
!! | AATCTAAAGTACAAATGGTT+TGG | - | chr4_4:73367145-73367164 | Msa0701930:three_prime_UTR | 25.0% |
! | TGGTTAATTAAATCTGAATC+GGG | + | chr4_4:73367268-73367287 | None:intergenic | 25.0% |
! | AATTAATCCATAGACCAATT+AGG | - | chr4_4:73367354-73367373 | Msa0701930:three_prime_UTR | 25.0% |
! | GAAGTTGAATCTGAAAATTA+TGG | - | chr4_4:73367502-73367521 | Msa0701930:CDS | 25.0% |
!! | GTTTGTGTTATTAAATAAGC+AGG | - | chr4_4:73367605-73367624 | Msa0701930:intron | 25.0% |
! | TCGTTCAATAACAACTTTAA+CGG | + | chr4_4:73367963-73367982 | None:intergenic | 25.0% |
! | AACATCAACATTATGTGTAA+TGG | + | chr4_4:73368143-73368162 | None:intergenic | 25.0% |
! | TATTGAAATCCTCTAATTAC+AGG | - | chr4_4:73368289-73368308 | Msa0701930:intron | 25.0% |
! | ATTGAAATCCTCTAATTACA+GGG | - | chr4_4:73368290-73368309 | Msa0701930:intron | 25.0% |
!!! | GTTTTTAAAAAACAGGAGAA+GGG | + | chr4_4:73368369-73368388 | None:intergenic | 25.0% |
!!! | AGTTTTTAAAAAACAGGAGA+AGG | + | chr4_4:73368370-73368389 | None:intergenic | 25.0% |
!!! | TTTGGGAGTTTTTAAAAAAC+AGG | + | chr4_4:73368376-73368395 | None:intergenic | 25.0% |
!!! | TCATGCTATTATTTCTGATA+TGG | - | chr4_4:73368528-73368547 | Msa0701930:intron | 25.0% |
!!! | CATGCTATTATTTCTGATAT+GGG | - | chr4_4:73368529-73368548 | Msa0701930:intron | 25.0% |
!! | GAAACTACAACTTTATTTGA+TGG | + | chr4_4:73368750-73368769 | None:intergenic | 25.0% |
!!! | GCTTGGTTATTTTAATTCAT+CGG | + | chr4_4:73369005-73369024 | None:intergenic | 25.0% |
!! | AATTGATAATTAACTGGTCT+TGG | - | chr4_4:73369027-73369046 | Msa0701930:CDS | 25.0% |
! | TGAAGACCTATATTTAAAGA+GGG | + | chr4_4:73369438-73369457 | None:intergenic | 25.0% |
! | GACTGTGATAGAATAAATAA+GGG | - | chr4_4:73369630-73369649 | Msa0701930:intron | 25.0% |
!!! | TCAAATCTTTTTTATTGGAG+TGG | - | chr4_4:73369895-73369914 | Msa0701930:intron | 25.0% |
! | CATGAAAAAACTAAATATGG+GGG | + | chr4_4:73370081-73370100 | None:intergenic | 25.0% |
!!! | TTTCATGTTTTAGTTCCTTT+TGG | - | chr4_4:73370094-73370113 | Msa0701930:intron | 25.0% |
!! | GAGATCAATTTCTACATTTT+TGG | + | chr4_4:73370277-73370296 | None:intergenic | 25.0% |
! | TTCTGATAATACTAATGCTA+AGG | - | chr4_4:73370551-73370570 | Msa0701930:intron | 25.0% |
! | TCTGATAATACTAATGCTAA+GGG | - | chr4_4:73370552-73370571 | Msa0701930:intron | 25.0% |
! | TTAATCTGTTAATTGTAGGT+TGG | - | chr4_4:73370731-73370750 | Msa0701930:intron | 25.0% |
!! | ATTTTTGTGCATTTCTTTCT+TGG | + | chr4_4:73370819-73370838 | None:intergenic | 25.0% |
! | AGAAATGCACAAAAATGAAA+AGG | - | chr4_4:73370823-73370842 | Msa0701930:CDS | 25.0% |
!!! | GTGGAGTCATTTTTATTTTT+TGG | - | chr4_4:73370871-73370890 | Msa0701930:CDS | 25.0% |
! | TATTTACTGCAACTATAACA+TGG | + | chr4_4:73371247-73371266 | None:intergenic | 25.0% |
! | TATAGTTGCAGTAAATAAGA+TGG | - | chr4_4:73371250-73371269 | Msa0701930:CDS | 25.0% |
! | TATAAAATCAAATCGGTCTT+TGG | + | chr4_4:73371291-73371310 | None:intergenic | 25.0% |
!!! | TACCAAATTTTGATTTTCCA+TGG | + | chr4_4:73371387-73371406 | None:intergenic | 25.0% |
!!! | CAATCATGCTTTTGTTTATT+AGG | - | chr4_4:73371562-73371581 | Msa0701930:intron | 25.0% |
!!! | TATTAGGTTTTTAGTCCTAT+AGG | - | chr4_4:73371578-73371597 | Msa0701930:CDS | 25.0% |
!!! | ATTAGGTTTTTAGTCCTATA+GGG | - | chr4_4:73371579-73371598 | Msa0701930:CDS | 25.0% |
! | AGTAGGGTTAATTAAGTAAA+TGG | + | chr4_4:73371634-73371653 | None:intergenic | 25.0% |
! | GTTAATAGGGTTAATTAAGT+AGG | + | chr4_4:73371651-73371670 | None:intergenic | 25.0% |
!!! | CTATAGGGTTTTATTTTGTA+GGG | + | chr4_4:73371731-73371750 | None:intergenic | 25.0% |
! | CTACAAAATAAAACCCTATA+GGG | - | chr4_4:73371730-73371749 | Msa0701930:CDS | 25.0% |
!!! | TTTTAACTCAGAATACGATA+TGG | + | chr4_4:73371937-73371956 | None:intergenic | 25.0% |
! | TATAATATGATACAGATACG+AGG | + | chr4_4:73371970-73371989 | None:intergenic | 25.0% |
! | TTTACTTTAATATCTCACCT+TGG | - | chr4_4:73372429-73372448 | Msa0701930:intron | 25.0% |
! | GGATTTACAAATTCATTACA+AGG | + | chr4_4:73372475-73372494 | None:intergenic | 25.0% |
! | AATATGAGAACCATAAATCA+AGG | + | chr4_4:73372711-73372730 | None:intergenic | 25.0% |
!! | CACATATTAAGTTAGGTTTT+AGG | + | chr4_4:73372784-73372803 | None:intergenic | 25.0% |
! | TTTATTCAGTCAAACTCTAA+AGG | - | chr4_4:73372854-73372873 | Msa0701930:CDS | 25.0% |
! | CCTATCAAATAATCATTCTT+TGG | + | chr4_4:73372995-73373014 | None:intergenic | 25.0% |
! | CCAAAGAATGATTATTTGAT+AGG | - | chr4_4:73372992-73373011 | Msa0701930:intron | 25.0% |
! | TATAGTATGCTAAAACTTGA+TGG | - | chr4_4:73373043-73373062 | Msa0701930:intron | 25.0% |
!! | GATTTGATAACATCACATAT+TGG | + | chr4_4:73373167-73373186 | None:intergenic | 25.0% |
! | CAGTTATAGTAAATTAGTCA+CGG | + | chr4_4:73373275-73373294 | None:intergenic | 25.0% |
! | ATTAGTGTGAATCTTTCATT+TGG | + | chr4_4:73373303-73373322 | None:intergenic | 25.0% |
!!! | ATAAACACAATGAAAGCATT+GGG | + | chr4_4:73373415-73373434 | None:intergenic | 25.0% |
!! | AATAAACACAATGAAAGCAT+TGG | + | chr4_4:73373416-73373435 | None:intergenic | 25.0% |
! | AAAAAATAAAGAAGTCCCTA+TGG | + | chr4_4:73373611-73373630 | None:intergenic | 25.0% |
! | AATAGCTGGAAAAACATTTA+TGG | + | chr4_4:73373867-73373886 | None:intergenic | 25.0% |
! | AATTATTAAGGTGTACAGTT+AGG | + | chr4_4:73374088-73374107 | None:intergenic | 25.0% |
! | CTGTACACCTTAATAATTAT+AGG | - | chr4_4:73374090-73374109 | Msa0701930:intron | 25.0% |
! | ACTAGCACCTATAATTATTA+AGG | + | chr4_4:73374100-73374119 | None:intergenic | 25.0% |
! | ACATGTGAATTATGTAAAGA+TGG | - | chr4_4:73374940-73374959 | Msa0701930:five_prime_UTR | 25.0% |
! | AGCTATCTATGATACATATA+TGG | + | chr4_4:73375010-73375029 | None:intergenic | 25.0% |
!! | TAAAGTACAAATGGTTTGGT+TGG | - | chr4_4:73367149-73367168 | Msa0701930:three_prime_UTR | 30.0% |
TAGTAGAAGAAACTTGTAGT+AGG | - | chr4_4:73367181-73367200 | Msa0701930:three_prime_UTR | 30.0% | |
AGTAGAAGAAACTTGTAGTA+GGG | - | chr4_4:73367182-73367201 | Msa0701930:three_prime_UTR | 30.0% | |
TGGAGTTAAACAAGTATGAT+CGG | + | chr4_4:73367229-73367248 | None:intergenic | 30.0% | |
GAATTGAAAAGATGAGAAGA+AGG | + | chr4_4:73367302-73367321 | None:intergenic | 30.0% | |
ATTCCATAGTTTACTTTACG+CGG | + | chr4_4:73367436-73367455 | None:intergenic | 30.0% | |
!! | TTTACCTGTTTTGTTGATGT+TGG | + | chr4_4:73367780-73367799 | None:intergenic | 30.0% |
TTAGTTTAGTACTAGGTCTA+AGG | - | chr4_4:73367828-73367847 | Msa0701930:intron | 30.0% | |
GTTCAATAACAACTTTAACG+GGG | + | chr4_4:73367961-73367980 | None:intergenic | 30.0% | |
CGTTCAATAACAACTTTAAC+GGG | + | chr4_4:73367962-73367981 | None:intergenic | 30.0% | |
TTTAAAAACTCCCAAACTAG+TGG | - | chr4_4:73368380-73368399 | Msa0701930:intron | 30.0% | |
! | AAGACAATAAAGCTTTGTCT+CGG | + | chr4_4:73368446-73368465 | None:intergenic | 30.0% |
!! | AGACAAAGCTTTATTGTCTT+AGG | - | chr4_4:73368446-73368465 | Msa0701930:intron | 30.0% |
!! | AAGCTTTATTGTCTTAGGTA+AGG | - | chr4_4:73368451-73368470 | Msa0701930:intron | 30.0% |
!! | ATTGATTGGCTTGTTTGATA+TGG | - | chr4_4:73368488-73368507 | Msa0701930:intron | 30.0% |
!! | TTATTTCTGATATGGGAAGA+TGG | - | chr4_4:73368536-73368555 | Msa0701930:intron | 30.0% |
! | TATTTCTGATATGGGAAGAT+GGG | - | chr4_4:73368537-73368556 | Msa0701930:intron | 30.0% |
TGAGTGACAATTTCGTTTAT+AGG | - | chr4_4:73368911-73368930 | Msa0701930:intron | 30.0% | |
GAGTGACAATTTCGTTTATA+GGG | - | chr4_4:73368912-73368931 | Msa0701930:intron | 30.0% | |
TTTATAGGGCTATTAGAGAA+AGG | - | chr4_4:73368926-73368945 | Msa0701930:intron | 30.0% | |
CTTAAAGGGAATTTGACTAT+AGG | - | chr4_4:73369083-73369102 | Msa0701930:CDS | 30.0% | |
ATAGCTGAGATCTTAAACTT+CGG | - | chr4_4:73369120-73369139 | Msa0701930:CDS | 30.0% | |
GAAGATATAAACAAAACTCC+TGG | - | chr4_4:73369234-73369253 | Msa0701930:intron | 30.0% | |
CAATGATTGAAAAAGAGACT+GGG | + | chr4_4:73369274-73369293 | None:intergenic | 30.0% | |
GAATTTCATGAAATTCTCCT+TGG | + | chr4_4:73369389-73369408 | None:intergenic | 30.0% | |
GTGAAGACCTATATTTAAAG+AGG | + | chr4_4:73369439-73369458 | None:intergenic | 30.0% | |
AGACATTTAATATGAGATGG+AGG | + | chr4_4:73369527-73369546 | None:intergenic | 30.0% | |
!!! | GATATTTTAGTCAATGAAGC+TGG | + | chr4_4:73369587-73369606 | None:intergenic | 30.0% |
GGACTGTGATAGAATAAATA+AGG | - | chr4_4:73369629-73369648 | Msa0701930:intron | 30.0% | |
AGGGTAGTATTAGTAGAAAT+AGG | - | chr4_4:73369649-73369668 | Msa0701930:intron | 30.0% | |
CTCATATTAAGTGTAATGCT+TGG | + | chr4_4:73369732-73369751 | None:intergenic | 30.0% | |
GCATTACACTTAATATGAGA+CGG | - | chr4_4:73369733-73369752 | Msa0701930:intron | 30.0% | |
!!! | ATGTGCTATGTGTTAGTTTT+TGG | - | chr4_4:73369815-73369834 | Msa0701930:intron | 30.0% |
!! | AACCCAATTTTGAAGAATGT+AGG | + | chr4_4:73369974-73369993 | None:intergenic | 30.0% |
TCTTCAAAATTGGGTTTGAA+AGG | - | chr4_4:73369978-73369997 | Msa0701930:intron | 30.0% | |
GAAATTGATCTCGAAACAAT+TGG | - | chr4_4:73370285-73370304 | Msa0701930:intron | 30.0% | |
! | TTATCACTCTCTTCAACTTT+TGG | + | chr4_4:73370444-73370463 | None:intergenic | 30.0% |
AGTTTGTCTTCTAACAAAGA+CGG | - | chr4_4:73370468-73370487 | Msa0701930:intron | 30.0% | |
AATGTATCTTCAGATTGTTG+AGG | + | chr4_4:73370621-73370640 | None:intergenic | 30.0% | |
GTGCTTAATCTGTTAATTGT+AGG | - | chr4_4:73370727-73370746 | Msa0701930:intron | 30.0% | |
AATGCACAAAAATGAAAAGG+AGG | - | chr4_4:73370826-73370845 | Msa0701930:CDS | 30.0% | |
TTTATCCCAAACATGATTTC+TGG | - | chr4_4:73371095-73371114 | Msa0701930:CDS | 30.0% | |
GCACAACTTATTAGAAGTTT+CGG | - | chr4_4:73371215-73371234 | Msa0701930:CDS | 30.0% | |
! | TGATTTTATAAGACATCAGC+TGG | - | chr4_4:73371301-73371320 | Msa0701930:intron | 30.0% |
! | GATTTTATAAGACATCAGCT+GGG | - | chr4_4:73371302-73371321 | Msa0701930:intron | 30.0% |
TGCCATGGAAAATCAAAATT+TGG | - | chr4_4:73371382-73371401 | Msa0701930:CDS | 30.0% | |
!!! | TTTTGAAATGAGCATCAGAA+GGG | + | chr4_4:73371415-73371434 | None:intergenic | 30.0% |
!!! | TTTTTGAAATGAGCATCAGA+AGG | + | chr4_4:73371416-73371435 | None:intergenic | 30.0% |
GAAAAACTCAACAAATGTCT+TGG | + | chr4_4:73371543-73371562 | None:intergenic | 30.0% | |
ATTAACCCTATTAACCCTAT+AGG | - | chr4_4:73371656-73371675 | Msa0701930:CDS | 30.0% | |
TTAACCCTATTAACCCTATA+GGG | - | chr4_4:73371657-73371676 | Msa0701930:CDS | 30.0% | |
TTAACCCTATAGGGTTAATA+GGG | + | chr4_4:73371664-73371683 | None:intergenic | 30.0% | |
ATTAACCCTATAGGGTTAAT+AGG | + | chr4_4:73371665-73371684 | None:intergenic | 30.0% | |
!!! | CCTATAGGGTTTTATTTTGT+AGG | + | chr4_4:73371732-73371751 | None:intergenic | 30.0% |
CCTACAAAATAAAACCCTAT+AGG | - | chr4_4:73371729-73371748 | Msa0701930:CDS | 30.0% | |
! | GTTTTATGCTTCAGAAATAG+AGG | + | chr4_4:73372519-73372538 | None:intergenic | 30.0% |
CAGCTATGTAGAAAGTTTAA+CGG | - | chr4_4:73372538-73372557 | Msa0701930:intron | 30.0% | |
TAAGCTAAACGGATCAAATA+GGG | + | chr4_4:73372594-73372613 | None:intergenic | 30.0% | |
GTTTGACTGAATAAAACAGA+TGG | + | chr4_4:73372849-73372868 | None:intergenic | 30.0% | |
!!! | TGTGACCCTAATTTTGATTT+GGG | + | chr4_4:73372939-73372958 | None:intergenic | 30.0% |
!!! | ATGTGACCCTAATTTTGATT+TGG | + | chr4_4:73372940-73372959 | None:intergenic | 30.0% |
AAAACCAAGTTTCTTCTGAT+AGG | - | chr4_4:73373354-73373373 | Msa0701930:intron | 30.0% | |
AATTCCTATCAGAAGAAACT+TGG | + | chr4_4:73373361-73373380 | None:intergenic | 30.0% | |
AAAGGACAACTGAAAATACA+AGG | - | chr4_4:73373754-73373773 | Msa0701930:intron | 30.0% | |
AACATTTATGCTTCAGAACA+AGG | + | chr4_4:73373890-73373909 | None:intergenic | 30.0% | |
ATCAATTCCATGTTCAATCA+TGG | - | chr4_4:73373933-73373952 | Msa0701930:intron | 30.0% | |
TCAATTCCATGTTCAATCAT+GGG | - | chr4_4:73373934-73373953 | Msa0701930:intron | 30.0% | |
AATATTCTTGAAACTCTAGC+AGG | + | chr4_4:73374465-73374484 | None:intergenic | 30.0% | |
AAAACAAAGTGCAGTAATTG+AGG | - | chr4_4:73374545-73374564 | Msa0701930:CDS | 30.0% | |
! | TTTTCTAGATGTAAAGCTCT+TGG | - | chr4_4:73374705-73374724 | Msa0701930:intron | 30.0% |
TGTTCTTCCTAAAGATCTAA+GGG | + | chr4_4:73374739-73374758 | None:intergenic | 30.0% | |
TTGTTCTTCCTAAAGATCTA+AGG | + | chr4_4:73374740-73374759 | None:intergenic | 30.0% | |
AACAACATACATGGTATACA+GGG | + | chr4_4:73374839-73374858 | None:intergenic | 30.0% | |
! | TCTATTCTAGCTAAAGTAGA+TGG | + | chr4_4:73374880-73374899 | None:intergenic | 30.0% |
ACTTTAGCTAGAATAGACAA+TGG | - | chr4_4:73374883-73374902 | Msa0701930:five_prime_UTR | 30.0% | |
TGAAAAGATGAGAAGAAGGT+GGG | + | chr4_4:73367298-73367317 | None:intergenic | 35.0% | |
TTGAAAAGATGAGAAGAAGG+TGG | + | chr4_4:73367299-73367318 | None:intergenic | 35.0% | |
! | GGTAAAACCTAATTGGTCTA+TGG | + | chr4_4:73367364-73367383 | None:intergenic | 35.0% |
AGTCTTGGGTAAAACCTAAT+TGG | + | chr4_4:73367371-73367390 | None:intergenic | 35.0% | |
TAAGCAGTTAACAGAGTCTT+GGG | + | chr4_4:73367385-73367404 | None:intergenic | 35.0% | |
ATAAGCAGTTAACAGAGTCT+TGG | + | chr4_4:73367386-73367405 | None:intergenic | 35.0% | |
CTTATACCAAACTCATTCGA+CGG | - | chr4_4:73367401-73367420 | Msa0701930:three_prime_UTR | 35.0% | |
ATGGTCTCTTTCTTTGTATC+AGG | + | chr4_4:73367641-73367660 | None:intergenic | 35.0% | |
!! | TTGACTTGCTGTGATATTTG+TGG | - | chr4_4:73367716-73367735 | Msa0701930:CDS | 35.0% |
TTTAGTACTAGGTCTAAGGA+GGG | - | chr4_4:73367832-73367851 | Msa0701930:intron | 35.0% | |
CAAGAACTTCAACTACAAAC+TGG | + | chr4_4:73367996-73368015 | None:intergenic | 35.0% | |
TTCCTCTACTTCCCATATTT+GGG | + | chr4_4:73368061-73368080 | None:intergenic | 35.0% | |
!! | ATTATGTGTAATGGACACAG+CGG | + | chr4_4:73368134-73368153 | None:intergenic | 35.0% |
TGAGAAAAAGAGATCTGCAA+CGG | + | chr4_4:73368196-73368215 | None:intergenic | 35.0% | |
TACCAAATCACAAATGCCTT+CGG | - | chr4_4:73368217-73368236 | Msa0701930:intron | 35.0% | |
TTACAGTTCCCTGTAATTAG+AGG | + | chr4_4:73368301-73368320 | None:intergenic | 35.0% | |
AAAAAACAGGAGAAGGGTTT+GGG | + | chr4_4:73368363-73368382 | None:intergenic | 35.0% | |
TAAAAAACAGGAGAAGGGTT+TGG | + | chr4_4:73368364-73368383 | None:intergenic | 35.0% | |
AGTAAAGATGCCTCATTGAT+TGG | - | chr4_4:73368474-73368493 | Msa0701930:intron | 35.0% | |
ATCAAACAAGCCAATCAATG+AGG | + | chr4_4:73368487-73368506 | None:intergenic | 35.0% | |
! | AGATGGGATTTGGAATCTAT+TGG | - | chr4_4:73368553-73368572 | Msa0701930:intron | 35.0% |
! | TCCATGTCACATCTTTTAGA+AGG | - | chr4_4:73368669-73368688 | Msa0701930:intron | 35.0% |
! | ACCTTCTAAAAGATGTGACA+TGG | + | chr4_4:73368673-73368692 | None:intergenic | 35.0% |
!!! | TCTTTTAGAAGGTATTGCAG+TGG | - | chr4_4:73368680-73368699 | Msa0701930:intron | 35.0% |
GATAATAGCACACTCAACTA+AGG | + | chr4_4:73368848-73368867 | None:intergenic | 35.0% | |
AAAACCTATGAGGTACAGTT+TGG | + | chr4_4:73368961-73368980 | None:intergenic | 35.0% | |
!!! | TCCTGGTTTTGACAACTTAA+AGG | - | chr4_4:73369068-73369087 | Msa0701930:CDS | 35.0% |
!!! | CCTGGTTTTGACAACTTAAA+GGG | - | chr4_4:73369069-73369088 | Msa0701930:CDS | 35.0% |
AACCTAGCACTATACAATGT+GGG | + | chr4_4:73369158-73369177 | None:intergenic | 35.0% | |
AAACCTAGCACTATACAATG+TGG | + | chr4_4:73369159-73369178 | None:intergenic | 35.0% | |
TAGTGCTAGGTTTACAACAA+TGG | - | chr4_4:73369166-73369185 | Msa0701930:intron | 35.0% | |
!! | CATCAAAGAGATTTTTCAGC+GGG | + | chr4_4:73369209-73369228 | None:intergenic | 35.0% |
!! | GCATCAAAGAGATTTTTCAG+CGG | + | chr4_4:73369210-73369229 | None:intergenic | 35.0% |
GCAATGATTGAAAAAGAGAC+TGG | + | chr4_4:73369275-73369294 | None:intergenic | 35.0% | |
GGAAATATCACAACCTCTTT+GGG | + | chr4_4:73369309-73369328 | None:intergenic | 35.0% | |
TGGAAATATCACAACCTCTT+TGG | + | chr4_4:73369310-73369329 | None:intergenic | 35.0% | |
ATATTTCCAATGCAAGACGT+TGG | - | chr4_4:73369321-73369340 | Msa0701930:intron | 35.0% | |
AGCCATCCCTCTTTAAATAT+AGG | - | chr4_4:73369429-73369448 | Msa0701930:intron | 35.0% | |
GACCTATATTTAAAGAGGGA+TGG | + | chr4_4:73369434-73369453 | None:intergenic | 35.0% | |
!!! | CAATGAAGCTGGTTTTATCA+TGG | + | chr4_4:73369576-73369595 | None:intergenic | 35.0% |
TACACTTAATATGAGACGGA+AGG | - | chr4_4:73369737-73369756 | Msa0701930:intron | 35.0% | |
GATGGAACATCAAACTTGAA+AGG | + | chr4_4:73369927-73369946 | None:intergenic | 35.0% | |
TGGCCTACATTCTTCAAAAT+TGG | - | chr4_4:73369968-73369987 | Msa0701930:intron | 35.0% | |
GGCCTACATTCTTCAAAATT+GGG | - | chr4_4:73369969-73369988 | Msa0701930:intron | 35.0% | |
CAATCAAGCAAAGAAAAGTC+CGG | - | chr4_4:73370402-73370421 | Msa0701930:intron | 35.0% | |
!! | TGGTAAGAAACTTGTTGATG+AGG | + | chr4_4:73370579-73370598 | None:intergenic | 35.0% |
CCTGGGATATATGAAAGAAT+AGG | + | chr4_4:73370678-73370697 | None:intergenic | 35.0% | |
CCTATTCTTTCATATATCCC+AGG | - | chr4_4:73370675-73370694 | Msa0701930:intron | 35.0% | |
TATCCCAGGACTATATTTCA+AGG | - | chr4_4:73370689-73370708 | Msa0701930:intron | 35.0% | |
CTTCCTTGAAATATAGTCCT+GGG | + | chr4_4:73370695-73370714 | None:intergenic | 35.0% | |
TCTTCCTTGAAATATAGTCC+TGG | + | chr4_4:73370696-73370715 | None:intergenic | 35.0% | |
TCTGGAAAATCAACACTATC+TGG | - | chr4_4:73370764-73370783 | Msa0701930:intron | 35.0% | |
GAAAATCAACACTATCTGGT+AGG | - | chr4_4:73370768-73370787 | Msa0701930:intron | 35.0% | |
TGGTAGGTTATTACACCTAT+TGG | - | chr4_4:73370784-73370803 | Msa0701930:intron | 35.0% | |
GGTAGGTTATTACACCTATT+GGG | - | chr4_4:73370785-73370804 | Msa0701930:intron | 35.0% | |
! | TTCCTCGTCTCTTTTAATCA+GGG | - | chr4_4:73370930-73370949 | Msa0701930:CDS | 35.0% |
TTGATGAAAGTTCCGAAGAA+AGG | - | chr4_4:73370982-73371001 | Msa0701930:CDS | 35.0% | |
TGATGAAAGTTCCGAAGAAA+GGG | - | chr4_4:73370983-73371002 | Msa0701930:CDS | 35.0% | |
GGGATAAAATCTTTATGACC+AGG | + | chr4_4:73371083-73371102 | None:intergenic | 35.0% | |
TAGCTCCAGAAATCATGTTT+GGG | + | chr4_4:73371103-73371122 | None:intergenic | 35.0% | |
TCAAAGATTCTTCTCTCTCA+TGG | - | chr4_4:73371348-73371367 | Msa0701930:intron | 35.0% | |
! | TTTGAAATGAGCATCAGAAG+GGG | + | chr4_4:73371414-73371433 | None:intergenic | 35.0% |
CTGATGCTCATTTCAAAAAC+TGG | - | chr4_4:73371417-73371436 | Msa0701930:CDS | 35.0% | |
ATGATACAGATACGAGGATA+CGG | + | chr4_4:73371964-73371983 | None:intergenic | 35.0% | |
TTAGTGGAACCCAACTTAAA+TGG | - | chr4_4:73372280-73372299 | Msa0701930:CDS | 35.0% | |
! | CTTGGGAAACCATTTAAGTT+GGG | + | chr4_4:73372292-73372311 | None:intergenic | 35.0% |
CAGCCAATTTAGAGATAAAC+CGG | + | chr4_4:73372318-73372337 | None:intergenic | 35.0% | |
CTAAGCTAAACGGATCAAAT+AGG | + | chr4_4:73372595-73372614 | None:intergenic | 35.0% | |
TTCCTTCTCACCTTGATTTA+TGG | - | chr4_4:73372698-73372717 | Msa0701930:intron | 35.0% | |
AACCATAAATCAAGGTGAGA+AGG | + | chr4_4:73372703-73372722 | None:intergenic | 35.0% | |
! | TTCAGTTGGAGGGTATAAAT+TGG | + | chr4_4:73372750-73372769 | None:intergenic | 35.0% |
!!! | TTAGGTTTTAGGACCAAAGT+AGG | + | chr4_4:73372773-73372792 | None:intergenic | 35.0% |
TACTGCATGTCAGAAAGATT+AGG | + | chr4_4:73372817-73372836 | None:intergenic | 35.0% | |
! | TGGTTGTTTCATTGTGAAAC+AGG | - | chr4_4:73373063-73373082 | Msa0701930:intron | 35.0% |
TCATTGTGAAACAGGTATAC+TGG | - | chr4_4:73373071-73373090 | Msa0701930:intron | 35.0% | |
TATACTGGACCTTATCTGTT+AGG | - | chr4_4:73373086-73373105 | Msa0701930:intron | 35.0% | |
GTTATCAAATCAACTGCACA+AGG | - | chr4_4:73373176-73373195 | Msa0701930:intron | 35.0% | |
! | GTGGAACAAAGGTATAAAAC+TGG | - | chr4_4:73373243-73373262 | Msa0701930:intron | 35.0% |
!! | GATGACGGAAACAAATAAAC+AGG | + | chr4_4:73373500-73373519 | None:intergenic | 35.0% |
TGAATGGAAAATCACGATGA+CGG | + | chr4_4:73373515-73373534 | None:intergenic | 35.0% | |
GGAAAAACATTTATGGACCT+GGG | + | chr4_4:73373860-73373879 | None:intergenic | 35.0% | |
TGGAAAAACATTTATGGACC+TGG | + | chr4_4:73373861-73373880 | None:intergenic | 35.0% | |
TGCTCAAGTTCTTCTTAACA+TGG | - | chr4_4:73374041-73374060 | Msa0701930:intron | 35.0% | |
! | TGTTGATGGAAGTCTTGTAT+TGG | - | chr4_4:73374222-73374241 | Msa0701930:intron | 35.0% |
TTGAAATTGCTTGTCTTGGA+TGG | - | chr4_4:73374301-73374320 | Msa0701930:intron | 35.0% | |
! | AGAGTATCCCTTAGATCTTT+AGG | - | chr4_4:73374729-73374748 | Msa0701930:CDS | 35.0% |
TTAGGAAGAACAATAGCTGT+TGG | - | chr4_4:73374747-73374766 | Msa0701930:CDS | 35.0% | |
GAACAACATACATGGTATAC+AGG | + | chr4_4:73374840-73374859 | None:intergenic | 35.0% | |
GTTTACTGGAACAACATACA+TGG | + | chr4_4:73374848-73374867 | None:intergenic | 35.0% | |
GATGGAAAACAGATGTTTAC+TGG | + | chr4_4:73374862-73374881 | None:intergenic | 35.0% | |
TTAGCTAGAATAGACAATGG+CGG | - | chr4_4:73374886-73374905 | Msa0701930:five_prime_UTR | 35.0% | |
TAATTCTTGTTGAGCTTCTC+TGG | - | chr4_4:73374914-73374933 | Msa0701930:five_prime_UTR | 35.0% | |
GAAGAAACTTGTAGTAGGGA+TGG | - | chr4_4:73367186-73367205 | Msa0701930:three_prime_UTR | 40.0% | |
GAATCGGGAAGCGAATATTA+GGG | + | chr4_4:73367253-73367272 | None:intergenic | 40.0% | |
TGAATCGGGAAGCGAATATT+AGG | + | chr4_4:73367254-73367273 | None:intergenic | 40.0% | |
GAAAAGATGAGAAGAAGGTG+GGG | + | chr4_4:73367297-73367316 | None:intergenic | 40.0% | |
! | GATTTTCCGTCGAATGAGTT+TGG | + | chr4_4:73367410-73367429 | None:intergenic | 40.0% |
ATGCCGCGTAAAGTAAACTA+TGG | - | chr4_4:73367430-73367449 | Msa0701930:exon | 40.0% | |
TTACTACGACGATGACTATG+AGG | - | chr4_4:73367459-73367478 | Msa0701930:CDS | 40.0% | |
! | GTGGTTCCATTGATAACCAA+GGG | + | chr4_4:73367755-73367774 | None:intergenic | 40.0% |
!! | TGTTTTGTTGATGTTGGAGG+TGG | + | chr4_4:73367774-73367793 | None:intergenic | 40.0% |
ACCTCCAACATCAACAAAAC+AGG | - | chr4_4:73367773-73367792 | Msa0701930:CDS | 40.0% | |
!! | ACCTGTTTTGTTGATGTTGG+AGG | + | chr4_4:73367777-73367796 | None:intergenic | 40.0% |
GTTTAGTACTAGGTCTAAGG+AGG | - | chr4_4:73367831-73367850 | Msa0701930:intron | 40.0% | |
TGAACTTCCTGTTGCTCTTA+TGG | - | chr4_4:73367881-73367900 | Msa0701930:intron | 40.0% | |
AGTTTCTCCATAAGAGCAAC+AGG | + | chr4_4:73367891-73367910 | None:intergenic | 40.0% | |
AACTTCAACTACAAACTGGC+AGG | + | chr4_4:73367992-73368011 | None:intergenic | 40.0% | |
TGTAGTTGAAGTTCTTGTCG+TGG | - | chr4_4:73367999-73368018 | Msa0701930:CDS | 40.0% | |
GTTCCTCTACTTCCCATATT+TGG | + | chr4_4:73368062-73368081 | None:intergenic | 40.0% | |
CTTTGCAGTGGAGCAAAATT+CGG | - | chr4_4:73368081-73368100 | Msa0701930:CDS | 40.0% | |
! | GTTTTCTCCAGCAAGAACAA+TGG | - | chr4_4:73368160-73368179 | Msa0701930:intron | 40.0% |
! | TCTAAAGCCATTGTTCTTGC+TGG | + | chr4_4:73368170-73368189 | None:intergenic | 40.0% |
GTTTGTAAACCATTCACCGA+AGG | + | chr4_4:73368236-73368255 | None:intergenic | 40.0% | |
CAGGGAACTGTAAAAAGCAA+CGG | - | chr4_4:73368308-73368327 | Msa0701930:intron | 40.0% | |
ACTGTAAAAAGCAACGGAAG+AGG | - | chr4_4:73368314-73368333 | Msa0701930:intron | 40.0% | |
CTGTAAAAAGCAACGGAAGA+GGG | - | chr4_4:73368315-73368334 | Msa0701930:intron | 40.0% | |
TGATATGGGAAGATGGGATT+TGG | - | chr4_4:73368543-73368562 | Msa0701930:intron | 40.0% | |
!! | ATGGAAGCATTTGTAGCGAA+GGG | + | chr4_4:73368731-73368750 | None:intergenic | 40.0% |
TGTCACTCAGATCCACTTAA+GGG | + | chr4_4:73368900-73368919 | None:intergenic | 40.0% | |
TTGTCACTCAGATCCACTTA+AGG | + | chr4_4:73368901-73368920 | None:intergenic | 40.0% | |
CTATGAGGTACAGTTTGGTT+TGG | + | chr4_4:73368956-73368975 | None:intergenic | 40.0% | |
CAAACCAAACTGTACCTCAT+AGG | - | chr4_4:73368954-73368973 | Msa0701930:intron | 40.0% | |
CTCTTGCAGAAAAACCTATG+AGG | + | chr4_4:73368971-73368990 | None:intergenic | 40.0% | |
!! | CCCTTTAAGTTGTCAAAACC+AGG | + | chr4_4:73369072-73369091 | None:intergenic | 40.0% |
ATCCCACATTGTATAGTGCT+AGG | - | chr4_4:73369153-73369172 | Msa0701930:intron | 40.0% | |
!!! | GAGATTTTTCAGCGGGTTAT+AGG | + | chr4_4:73369202-73369221 | None:intergenic | 40.0% |
CAAAAACCAACGTCTTGCAT+TGG | + | chr4_4:73369330-73369349 | None:intergenic | 40.0% | |
!!! | CAATGCAAGACGTTGGTTTT+TGG | - | chr4_4:73369328-73369347 | Msa0701930:intron | 40.0% |
TACAAGCTTGAGAATGTCCA+AGG | - | chr4_4:73369369-73369388 | Msa0701930:intron | 40.0% | |
! | AAGGTTTGCTCTCATGTACA+AGG | + | chr4_4:73369845-73369864 | None:intergenic | 40.0% |
AGTATGAACCACATCATCTG+GGG | + | chr4_4:73369949-73369968 | None:intergenic | 40.0% | |
CAGTATGAACCACATCATCT+GGG | + | chr4_4:73369950-73369969 | None:intergenic | 40.0% | |
GTTGTCTGCACTTTCAGTAT+TGG | + | chr4_4:73370223-73370242 | None:intergenic | 40.0% | |
CTTATCAGCATCTTTGCCAA+AGG | - | chr4_4:73370323-73370342 | Msa0701930:intron | 40.0% | |
GCATAGTTTCCTTTGTCCTT+TGG | + | chr4_4:73370342-73370361 | None:intergenic | 40.0% | |
AACTGTGTGGTTAAAACTGC+TGG | + | chr4_4:73370511-73370530 | None:intergenic | 40.0% | |
!! | GAACTTTGAGATCTTGCATC+AGG | + | chr4_4:73370534-73370553 | None:intergenic | 40.0% |
TTTCTTACCAGCCAGAAAAG+TGG | - | chr4_4:73370589-73370608 | Msa0701930:intron | 40.0% | |
!! | TAGGTTGGTCATGTTGATTC+TGG | - | chr4_4:73370746-73370765 | Msa0701930:intron | 40.0% |
TCTTGGAAATTCGTCCCAAT+AGG | + | chr4_4:73370802-73370821 | None:intergenic | 40.0% | |
CGGTGAAATTACCTGTAACT+TGG | + | chr4_4:73370852-73370871 | None:intergenic | 40.0% | |
AGTTACAGGTAATTTCACCG+TGG | - | chr4_4:73370852-73370871 | Msa0701930:CDS | 40.0% | |
! | CTTCCTCGTCTCTTTTAATC+AGG | - | chr4_4:73370929-73370948 | Msa0701930:CDS | 40.0% |
! | GTCTCTTTTAATCAGGGCAA+AGG | - | chr4_4:73370936-73370955 | Msa0701930:CDS | 40.0% |
AAGGATCCTTTGCTTATGCT+TGG | - | chr4_4:73370955-73370974 | Msa0701930:CDS | 40.0% | |
AGGATCCTTTGCTTATGCTT+GGG | - | chr4_4:73370956-73370975 | Msa0701930:CDS | 40.0% | |
AAAGTTCCGAAGAAAGGGAA+AGG | - | chr4_4:73370988-73371007 | Msa0701930:CDS | 40.0% | |
AAGTTCCGAAGAAAGGGAAA+GGG | - | chr4_4:73370989-73371008 | Msa0701930:CDS | 40.0% | |
TATTCCCCTTTCCCTTTCTT+CGG | + | chr4_4:73370997-73371016 | None:intergenic | 40.0% | |
GTAGCTCCAGAAATCATGTT+TGG | + | chr4_4:73371104-73371123 | None:intergenic | 40.0% | |
! | CTTGTTATAGATGCCTCACT+TGG | - | chr4_4:73371143-73371162 | Msa0701930:CDS | 40.0% |
AATCTTTGAACCCACATGAG+CGG | + | chr4_4:73371337-73371356 | None:intergenic | 40.0% | |
! | TGATTTTCCATGGCACTCAA+GGG | + | chr4_4:73371377-73371396 | None:intergenic | 40.0% |
! | TTGATTTTCCATGGCACTCA+AGG | + | chr4_4:73371378-73371397 | None:intergenic | 40.0% |
GATGTGATCTTAACTTCCCT+TGG | - | chr4_4:73371459-73371478 | Msa0701930:CDS | 40.0% | |
TGATCTTAACTTCCCTTGGT+GGG | - | chr4_4:73371463-73371482 | Msa0701930:CDS | 40.0% | |
TATAGTCTAATGCCCACCAA+GGG | + | chr4_4:73371478-73371497 | None:intergenic | 40.0% | |
TTATAGTCTAATGCCCACCA+AGG | + | chr4_4:73371479-73371498 | None:intergenic | 40.0% | |
CGGATACATAGTACAGCTAT+GGG | + | chr4_4:73371993-73372012 | None:intergenic | 40.0% | |
CCATAGCTGTACTATGTATC+CGG | - | chr4_4:73371991-73372010 | Msa0701930:CDS | 40.0% | |
CATAGCTGTACTATGTATCC+GGG | - | chr4_4:73371992-73372011 | Msa0701930:CDS | 40.0% | |
CCTTGGGAAACCATTTAAGT+TGG | + | chr4_4:73372293-73372312 | None:intergenic | 40.0% | |
CCAACTTAAATGGTTTCCCA+AGG | - | chr4_4:73372290-73372309 | Msa0701930:CDS | 40.0% | |
! | GAGCCGGTTTATCTCTAAAT+TGG | - | chr4_4:73372312-73372331 | Msa0701930:intron | 40.0% |
TGTGTTAGTTCCAGAAAGAC+TGG | - | chr4_4:73372370-73372389 | Msa0701930:intron | 40.0% | |
!! | GCACATAGCTATTTCTACCA+AGG | + | chr4_4:73372449-73372468 | None:intergenic | 40.0% |
TTGTAAATCCCACCTCAGAA+AGG | - | chr4_4:73372485-73372504 | Msa0701930:intron | 40.0% | |
AAGTTTAACGGTCTCACAGA+AGG | - | chr4_4:73372550-73372569 | Msa0701930:intron | 40.0% | |
CATTAGGCGACTAAGCTAAA+CGG | + | chr4_4:73372605-73372624 | None:intergenic | 40.0% | |
GATTTCAAAGCAGCAACAAC+AGG | + | chr4_4:73372632-73372651 | None:intergenic | 40.0% | |
AATTAGGGTCACATGCACTT+TGG | - | chr4_4:73372946-73372965 | Msa0701930:CDS | 40.0% | |
TCAACTGCACCTAACAGATA+AGG | + | chr4_4:73373098-73373117 | None:intergenic | 40.0% | |
TTTGCGAATTCTCTAGTAGG+AGG | + | chr4_4:73373131-73373150 | None:intergenic | 40.0% | |
! | GGTTTTGCGAATTCTCTAGT+AGG | + | chr4_4:73373134-73373153 | None:intergenic | 40.0% |
TCACATATTGGCATTAGCAG+AGG | + | chr4_4:73373155-73373174 | None:intergenic | 40.0% | |
TGTGAGGGACTAACTTTAAC+GGG | + | chr4_4:73373392-73373411 | None:intergenic | 40.0% | |
GTGTGAGGGACTAACTTTAA+CGG | + | chr4_4:73373393-73373412 | None:intergenic | 40.0% | |
!! | AATGAAAGCATTGGGTGTGA+GGG | + | chr4_4:73373407-73373426 | None:intergenic | 40.0% |
ACTACCACATGAATAGCCAT+AGG | - | chr4_4:73373592-73373611 | Msa0701930:intron | 40.0% | |
CTACCACATGAATAGCCATA+GGG | - | chr4_4:73373593-73373612 | Msa0701930:intron | 40.0% | |
CATTTATGGACCTGGGAAAA+AGG | + | chr4_4:73373853-73373872 | None:intergenic | 40.0% | |
GTTATGCCTTCAGATGTTGT+TGG | - | chr4_4:73374118-73374137 | Msa0701930:intron | 40.0% | |
ACTGTTCCAACAACATCTGA+AGG | + | chr4_4:73374127-73374146 | None:intergenic | 40.0% | |
TGTTGGAACAGTACGTACAT+TGG | - | chr4_4:73374135-73374154 | Msa0701930:intron | 40.0% | |
AATGTAGCTGTAACGTTGCA+TGG | - | chr4_4:73374199-73374218 | Msa0701930:intron | 40.0% | |
AAATGCTTTGCAACTGCAAC+AGG | + | chr4_4:73374277-73374296 | None:intergenic | 40.0% | |
! | TGTTGCAGTTGCAAAGCATT+TGG | - | chr4_4:73374276-73374295 | Msa0701930:intron | 40.0% |
GGAGTTGAAATTGCTTGTCT+TGG | - | chr4_4:73374297-73374316 | Msa0701930:intron | 40.0% | |
GGTACAAGTCCCATATTGAT+CGG | - | chr4_4:73374322-73374341 | Msa0701930:intron | 40.0% | |
!! | AGTCTAGACTTGTTGAACAG+AGG | - | chr4_4:73375054-73375073 | Msa0701930:five_prime_UTR | 40.0% |
!! | AGGAATGACTTGTTGAACAG+AGG | - | chr4_4:73375074-73375093 | Msa0701930:five_prime_UTR | 40.0% |
TGTAGTAGGGATGGCAATGT+CGG | - | chr4_4:73367195-73367214 | Msa0701930:three_prime_UTR | 45.0% | |
AGAAGAAGGTGGGGTTTGAT+TGG | + | chr4_4:73367288-73367307 | None:intergenic | 45.0% | |
AAAGAGACCATTAAGCCACC+TGG | - | chr4_4:73367650-73367669 | Msa0701930:intron | 45.0% | |
ATAGAGCAACTCCAAACTCC+AGG | + | chr4_4:73367671-73367690 | None:intergenic | 45.0% | |
CAAGCTCTCGTCATTGTCAT+AGG | + | chr4_4:73367699-73367718 | None:intergenic | 45.0% | |
CGTCATCCCTTGGTTATCAA+TGG | - | chr4_4:73367746-73367765 | Msa0701930:CDS | 45.0% | |
! | GGTGGTTCCATTGATAACCA+AGG | + | chr4_4:73367756-73367775 | None:intergenic | 45.0% |
GTCCAAGTTCTATGTCCATG+TGG | - | chr4_4:73367911-73367930 | Msa0701930:CDS | 45.0% | |
AAGTTCTATGTCCATGTGGC+CGG | - | chr4_4:73367915-73367934 | Msa0701930:CDS | 45.0% | |
TCAACTACAAACTGGCAGGA+TGG | + | chr4_4:73367988-73368007 | None:intergenic | 45.0% | |
CGTGGTACATAACGTACTTG+TGG | - | chr4_4:73368017-73368036 | Msa0701930:CDS | 45.0% | |
GAAGTAGAGGAACTTTGCAG+TGG | - | chr4_4:73368069-73368088 | Msa0701930:CDS | 45.0% | |
!! | CACCGAAGGCATTTGTGATT+TGG | + | chr4_4:73368222-73368241 | None:intergenic | 45.0% |
TCACAAATGCCTTCGGTGAA+TGG | - | chr4_4:73368224-73368243 | Msa0701930:intron | 45.0% | |
!!! | TGTCTCGGAAGTGTTTTCGA+GGG | + | chr4_4:73368431-73368450 | None:intergenic | 45.0% |
!!! | TTGTCTCGGAAGTGTTTTCG+AGG | + | chr4_4:73368432-73368451 | None:intergenic | 45.0% |
!! | GATGGAAGCATTTGTAGCGA+AGG | + | chr4_4:73368732-73368751 | None:intergenic | 45.0% |
GATCCTGTATCCCAACTTCA+TGG | - | chr4_4:73368870-73368889 | Msa0701930:intron | 45.0% | |
TTTCGTGATAGTCGTTGTCC+TGG | - | chr4_4:73369051-73369070 | Msa0701930:CDS | 45.0% | |
AAAAAGAGACTGGGCCAACT+TGG | + | chr4_4:73369265-73369284 | None:intergenic | 45.0% | |
!!! | GACGTTGGTTTTTGGACAGA+TGG | - | chr4_4:73369336-73369355 | Msa0701930:intron | 45.0% |
CCAGTATGAACCACATCATC+TGG | + | chr4_4:73369951-73369970 | None:intergenic | 45.0% | |
CCAGATGATGTGGTTCATAC+TGG | - | chr4_4:73369948-73369967 | Msa0701930:intron | 45.0% | |
! | AAGACAGATAGGTTGAGGGA+GGG | + | chr4_4:73370007-73370026 | None:intergenic | 45.0% |
! | CCTGAAGACAGATAGGTTGA+GGG | + | chr4_4:73370011-73370030 | None:intergenic | 45.0% |
GTTACAGCCTGAAGACAGAT+AGG | + | chr4_4:73370018-73370037 | None:intergenic | 45.0% | |
GCATCTTTGCCAAAGGACAA+AGG | - | chr4_4:73370330-73370349 | Msa0701930:intron | 45.0% | |
! | TGGTAGTGCAGACAAACTAC+CGG | + | chr4_4:73370424-73370443 | None:intergenic | 45.0% |
ATCTTGCATCAGGAACTGTG+TGG | + | chr4_4:73370524-73370543 | None:intergenic | 45.0% | |
!!! | TGAGGAAGCATCCACTTTTC+TGG | + | chr4_4:73370603-73370622 | None:intergenic | 45.0% |
TGAAAAGGAGGCCAAGTTAC+AGG | - | chr4_4:73370838-73370857 | Msa0701930:CDS | 45.0% | |
TGCCCTGATTAAAAGAGACG+AGG | + | chr4_4:73370935-73370954 | None:intergenic | 45.0% | |
AAGTGCCCAAGCATAAGCAA+AGG | + | chr4_4:73370964-73370983 | None:intergenic | 45.0% | |
AGTTCCGAAGAAAGGGAAAG+GGG | - | chr4_4:73370990-73371009 | Msa0701930:CDS | 45.0% | |
AAGGGGAATAACCATGACAG+TGG | - | chr4_4:73371007-73371026 | Msa0701930:CDS | 45.0% | |
AATAACCATGACAGTGGCTG+TGG | - | chr4_4:73371013-73371032 | Msa0701930:CDS | 45.0% | |
AGCTTCAAATGCACCAAGTG+AGG | + | chr4_4:73371159-73371178 | None:intergenic | 45.0% | |
!! | TCACTTGGTGCATTTGAAGC+TGG | - | chr4_4:73371158-73371177 | Msa0701930:CDS | 45.0% |
! | TGGTGCATTTGAAGCTGGTA+TGG | - | chr4_4:73371163-73371182 | Msa0701930:CDS | 45.0% |
! | GCATTTGAAGCTGGTATGGA+TGG | - | chr4_4:73371167-73371186 | Msa0701930:CDS | 45.0% |
! | TTTGAAGCTGGTATGGATGG+CGG | - | chr4_4:73371170-73371189 | Msa0701930:CDS | 45.0% |
GAATGTTTCTCCGCTCATGT+GGG | - | chr4_4:73371324-73371343 | Msa0701930:intron | 45.0% | |
GTGATCTTAACTTCCCTTGG+TGG | - | chr4_4:73371462-73371481 | Msa0701930:CDS | 45.0% | |
CCGGATACATAGTACAGCTA+TGG | + | chr4_4:73371994-73372013 | None:intergenic | 45.0% | |
ATGTATCCGGGCTTCATAGA+TGG | - | chr4_4:73372004-73372023 | Msa0701930:CDS | 45.0% | |
ATGTCACCATCTATGAAGCC+CGG | + | chr4_4:73372013-73372032 | None:intergenic | 45.0% | |
TAAATGGTTTCCCAAGGAGC+CGG | - | chr4_4:73372296-73372315 | Msa0701930:CDS | 45.0% | |
! | TAGAGATAAACCGGCTCCTT+GGG | + | chr4_4:73372309-73372328 | None:intergenic | 45.0% |
! | TTAGAGATAAACCGGCTCCT+TGG | + | chr4_4:73372310-73372329 | None:intergenic | 45.0% |
! | ATGGCTGCATATGCTACTTG+TGG | + | chr4_4:73372341-73372360 | None:intergenic | 45.0% |
!! | AAGTTCAGCCTTTCTGAGGT+GGG | + | chr4_4:73372496-73372515 | None:intergenic | 45.0% |
AGCAACAACAGGCAAGCATT+AGG | + | chr4_4:73372621-73372640 | None:intergenic | 45.0% | |
CCAAAGTAGGTTCAGTTGGA+GGG | + | chr4_4:73372760-73372779 | None:intergenic | 45.0% | |
ACCAAAGTAGGTTCAGTTGG+AGG | + | chr4_4:73372761-73372780 | None:intergenic | 45.0% | |
AGGACCAAAGTAGGTTCAGT+TGG | + | chr4_4:73372764-73372783 | None:intergenic | 45.0% | |
CGCGCTGCACATATTAAGTT+AGG | + | chr4_4:73372791-73372810 | None:intergenic | 45.0% | |
CAAATCAACTGCACAAGGAC+AGG | - | chr4_4:73373181-73373200 | Msa0701930:intron | 45.0% | |
AGCTCTTCGAAGTGGAACAA+AGG | - | chr4_4:73373232-73373251 | Msa0701930:intron | 45.0% | |
!! | CAATGAAAGCATTGGGTGTG+AGG | + | chr4_4:73373408-73373427 | None:intergenic | 45.0% |
AGTCCCTATGGCTATTCATG+TGG | + | chr4_4:73373599-73373618 | None:intergenic | 45.0% | |
CAAGGACAGCAAGTTTCATC+AGG | - | chr4_4:73373772-73373791 | Msa0701930:intron | 45.0% | |
GCTTCAGAACAAGGAATAGC+TGG | + | chr4_4:73373881-73373900 | None:intergenic | 45.0% | |
CATAGGCCCATGATTGAACA+TGG | + | chr4_4:73373943-73373962 | None:intergenic | 45.0% | |
CATGTTCAATCATGGGCCTA+TGG | - | chr4_4:73373941-73373960 | Msa0701930:intron | 45.0% | |
! | GTAACGTTGCATGGTGTTGA+TGG | - | chr4_4:73374208-73374227 | Msa0701930:intron | 45.0% |
! | GATGGAAGTCTTGTATTGGC+TGG | - | chr4_4:73374226-73374245 | Msa0701930:intron | 45.0% |
!! | ACCTGAGCACCGATCAATAT+GGG | + | chr4_4:73374334-73374353 | None:intergenic | 45.0% |
TCAGTACTTGATCCCAAGAC+TGG | - | chr4_4:73374486-73374505 | Msa0701930:CDS | 45.0% | |
ACTTGATCCCAAGACTGGTA+AGG | - | chr4_4:73374491-73374510 | Msa0701930:CDS | 45.0% | |
TTGGTCACCTTACCAGTCTT+GGG | + | chr4_4:73374501-73374520 | None:intergenic | 45.0% | |
TTTGGTCACCTTACCAGTCT+TGG | + | chr4_4:73374502-73374521 | None:intergenic | 45.0% | |
! | GAGACAACGAGGGTTCTTTT+TGG | + | chr4_4:73374520-73374539 | None:intergenic | 45.0% |
!! | GTTTTGACGTGAGACAACGA+GGG | + | chr4_4:73374530-73374549 | None:intergenic | 45.0% |
!!! | TGTTTTGACGTGAGACAACG+AGG | + | chr4_4:73374531-73374550 | None:intergenic | 45.0% |
GAAAACTCTACCACACAGAC+TGG | + | chr4_4:73374690-73374709 | None:intergenic | 45.0% | |
TATGCCGACAGTGATGACAT+TGG | - | chr4_4:73374806-73374825 | Msa0701930:exon | 45.0% | |
CTCTCCAATGTCATCACTGT+CGG | + | chr4_4:73374813-73374832 | None:intergenic | 45.0% | |
!!! | ATTTAAAATAAAAATTTGAA+TGG | + | chr4_4:73373531-73373550 | None:intergenic | 5.0% |
!! | AAATATTTAACAAAATAATT+TGG | - | chr4_4:73373656-73373675 | Msa0701930:intron | 5.0% |
CGGGAAGCGAATATTAGGGT+TGG | + | chr4_4:73367249-73367268 | None:intergenic | 50.0% | |
CCAAACTCCAGGTGGCTTAA+TGG | + | chr4_4:73367660-73367679 | None:intergenic | 50.0% | |
CCATTAAGCCACCTGGAGTT+TGG | - | chr4_4:73367657-73367676 | Msa0701930:intron | 50.0% | |
GGCCACATGGACATAGAACT+TGG | + | chr4_4:73367916-73367935 | None:intergenic | 50.0% | |
AGTTCTATGTCCATGTGGCC+GGG | - | chr4_4:73367916-73367935 | Msa0701930:CDS | 50.0% | |
CGTACTTGTGGAGTTTCTCG+AGG | - | chr4_4:73368029-73368048 | Msa0701930:CDS | 50.0% | |
ACTTGTGGAGTTTCTCGAGG+TGG | - | chr4_4:73368032-73368051 | Msa0701930:CDS | 50.0% | |
CTTGTGGAGTTTCTCGAGGT+GGG | - | chr4_4:73368033-73368052 | Msa0701930:CDS | 50.0% | |
TTGTGGAGTTTCTCGAGGTG+GGG | - | chr4_4:73368034-73368053 | Msa0701930:CDS | 50.0% | |
GGCCCAAATATGGGAAGTAG+AGG | - | chr4_4:73368056-73368075 | Msa0701930:CDS | 50.0% | |
! | AGCAGGCTCTCCACTAGTTT+GGG | + | chr4_4:73368393-73368412 | None:intergenic | 50.0% |
AAGCAGGCTCTCCACTAGTT+TGG | + | chr4_4:73368394-73368413 | None:intergenic | 50.0% | |
GGCAGAGGGTTATGATAAGC+AGG | + | chr4_4:73368410-73368429 | None:intergenic | 50.0% | |
!! | GAAGTGTTTTCGAGGGCAGA+GGG | + | chr4_4:73368424-73368443 | None:intergenic | 50.0% |
ATGACTCTACAGCTCAGTGC+TGG | - | chr4_4:73368805-73368824 | Msa0701930:intron | 50.0% | |
GCACCATGAAGTTGGGATAC+AGG | + | chr4_4:73368876-73368895 | None:intergenic | 50.0% | |
! | TAAGGGCGCACCATGAAGTT+GGG | + | chr4_4:73368883-73368902 | None:intergenic | 50.0% |
! | TTAAGGGCGCACCATGAAGT+TGG | + | chr4_4:73368884-73368903 | None:intergenic | 50.0% |
! | AACTCCTGGAGCATCCAAGT+TGG | - | chr4_4:73369248-73369267 | Msa0701930:intron | 50.0% |
!! | ACCTCTTTGGGACTCTGTTG+TGG | + | chr4_4:73369297-73369316 | None:intergenic | 50.0% |
TGTTCCATCCCCAGATGATG+TGG | - | chr4_4:73369938-73369957 | Msa0701930:intron | 50.0% | |
TGAACCACATCATCTGGGGA+TGG | + | chr4_4:73369945-73369964 | None:intergenic | 50.0% | |
! | GAAGACAGATAGGTTGAGGG+AGG | + | chr4_4:73370008-73370027 | None:intergenic | 50.0% |
CCCTCAACCTATCTGTCTTC+AGG | - | chr4_4:73370008-73370027 | Msa0701930:intron | 50.0% | |
GCCTGAAGACAGATAGGTTG+AGG | + | chr4_4:73370012-73370031 | None:intergenic | 50.0% | |
!! | GAAGCATCCACTTTTCTGGC+TGG | + | chr4_4:73370599-73370618 | None:intergenic | 50.0% |
ATATGCCACAGCCACTGTCA+TGG | + | chr4_4:73371021-73371040 | None:intergenic | 50.0% | |
GTTGTTGTGCTTGACTCTCC+TGG | - | chr4_4:73371062-73371081 | Msa0701930:CDS | 50.0% | |
GGAATGTTTCTCCGCTCATG+TGG | - | chr4_4:73371323-73371342 | Msa0701930:intron | 50.0% | |
ATGGATTCCCTTGAGTGCCA+TGG | - | chr4_4:73371367-73371386 | Msa0701930:intron | 50.0% | |
CTGTGTGAAGCCAGTCTTTC+TGG | + | chr4_4:73372383-73372402 | None:intergenic | 50.0% | |
! | GAAGTTCAGCCTTTCTGAGG+TGG | + | chr4_4:73372497-73372516 | None:intergenic | 50.0% |
GAGGAAGTTCAGCCTTTCTG+AGG | + | chr4_4:73372500-73372519 | None:intergenic | 50.0% | |
CCCTCCAACTGAACCTACTT+TGG | - | chr4_4:73372757-73372776 | Msa0701930:intron | 50.0% | |
AAGGACAGGTGTCTGCTTGT+GGG | - | chr4_4:73373195-73373214 | Msa0701930:intron | 50.0% | |
! | CGCAAATGTGCCTTTTTCCC+AGG | - | chr4_4:73373840-73373859 | Msa0701930:intron | 50.0% |
TGATCCAAGAGGTAGGCCAT+AGG | + | chr4_4:73373960-73373979 | None:intergenic | 50.0% | |
TATGGCCTACCTCTTGGATC+AGG | - | chr4_4:73373959-73373978 | Msa0701930:intron | 50.0% | |
TGATGGGATCCTGATCCAAG+AGG | + | chr4_4:73373971-73373990 | None:intergenic | 50.0% | |
!! | GGAAGTCTTGTATTGGCTGG+AGG | - | chr4_4:73374229-73374248 | Msa0701930:intron | 50.0% |
CTGCAACAGGAAAGTCAGGA+TGG | + | chr4_4:73374264-73374283 | None:intergenic | 50.0% | |
GCAACTGCAACAGGAAAGTC+AGG | + | chr4_4:73374268-73374287 | None:intergenic | 50.0% | |
! | TCCCATATTGATCGGTGCTC+AGG | - | chr4_4:73374330-73374349 | Msa0701930:intron | 50.0% |
!! | CACCTGAGCACCGATCAATA+TGG | + | chr4_4:73374335-73374354 | None:intergenic | 50.0% |
! | CAGTGCAACTGACTCAAAGC+TGG | - | chr4_4:73374626-73374645 | Msa0701930:intron | 50.0% |
CGACAGTGATGACATTGGAG+AGG | - | chr4_4:73374811-73374830 | Msa0701930:five_prime_UTR | 50.0% | |
GAGCAACTCCAAACTCCAGG+TGG | + | chr4_4:73367668-73367687 | None:intergenic | 55.0% | |
TGGCGTTCTACGTCATCCCT+TGG | - | chr4_4:73367736-73367755 | Msa0701930:CDS | 55.0% | |
GTTCTATGTCCATGTGGCCG+GGG | - | chr4_4:73367917-73367936 | Msa0701930:CDS | 55.0% | |
GAACATTCCACCATGCACCC+CGG | + | chr4_4:73367937-73367956 | None:intergenic | 55.0% | |
TGTGGAGTTTCTCGAGGTGG+GGG | - | chr4_4:73368035-73368054 | Msa0701930:CDS | 55.0% | |
GCAGTGGAGCAAAATTCGGC+AGG | - | chr4_4:73368085-73368104 | Msa0701930:CDS | 55.0% | |
!!! | GGAAGTGTTTTCGAGGGCAG+AGG | + | chr4_4:73368425-73368444 | None:intergenic | 55.0% |
CTTCATGGTGCGCCCTTAAG+TGG | - | chr4_4:73368885-73368904 | Msa0701930:intron | 55.0% | |
GCCACAACAGAGTCCCAAAG+AGG | - | chr4_4:73369293-73369312 | Msa0701930:intron | 55.0% | |
CAAGGACAGGTGTCTGCTTG+TGG | - | chr4_4:73373194-73373213 | Msa0701930:intron | 55.0% | |
GGTGTCTGCTTGTGGGAAAC+TGG | - | chr4_4:73373202-73373221 | Msa0701930:intron | 55.0% | |
GCTTGTGGGAAACTGGAAGC+AGG | - | chr4_4:73373209-73373228 | Msa0701930:intron | 55.0% | |
GAAGCAGGAGCTCTTCGAAG+TGG | - | chr4_4:73373224-73373243 | Msa0701930:intron | 55.0% | |
GGGATCCTGATCCAAGAGGT+AGG | + | chr4_4:73373967-73373986 | None:intergenic | 55.0% | |
TCCAGCTCTTGCAACAGAGC+AGG | + | chr4_4:73374176-73374195 | None:intergenic | 55.0% | |
TTTGCACGAGCCAGTCTGTG+TGG | - | chr4_4:73374677-73374696 | Msa0701930:intron | 55.0% | |
TCGAGGTGGGGGCCCAAATA+TGG | - | chr4_4:73368046-73368065 | Msa0701930:CDS | 60.0% | |
CGAGGTGGGGGCCCAAATAT+GGG | - | chr4_4:73368047-73368066 | Msa0701930:CDS | 60.0% | |
GGCGCATGTAGAGTGATCGC+TGG | - | chr4_4:73368106-73368125 | Msa0701930:CDS | 60.0% | |
TGGGCCAACTTGGATGCTCC+AGG | + | chr4_4:73369255-73369274 | None:intergenic | 60.0% | |
! | GCTGGTATGGATGGCGGCAA+AGG | - | chr4_4:73371176-73371195 | Msa0701930:CDS | 60.0% |
TGGGCCTATGGCCTACCTCT+TGG | - | chr4_4:73373953-73373972 | Msa0701930:intron | 60.0% | |
GCCTGCTCTGTTGCAAGAGC+TGG | - | chr4_4:73374172-73374191 | Msa0701930:intron | 60.0% | |
GTCCATGTGGCCGGGGTGCA+TGG | - | chr4_4:73367924-73367943 | Msa0701930:CDS | 70.0% | |
CACCATGCACCCCGGCCACA+TGG | + | chr4_4:73367929-73367948 | None:intergenic | 70.0% | |
CATGTGGCCGGGGTGCATGG+TGG | - | chr4_4:73367927-73367946 | Msa0701930:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 73367130 | 73375107 | 73367130 | ID=Msa0701930;Name=Msa0701930 |
chr4_4 | mRNA | 73367130 | 73375107 | 73367130 | ID=Msa0701930-mRNA-1;Parent=Msa0701930;Name=Msa0701930-mRNA-1;_AED=0.08;_eAED=0.08;_QI=300|0.9|0.90|1|1|1|11|304|791 |
chr4_4 | exon | 73367130 | 73367565 | 73367130 | ID=Msa0701930-mRNA-1:exon:22522;Parent=Msa0701930-mRNA-1 |
chr4_4 | exon | 73367671 | 73367805 | 73367671 | ID=Msa0701930-mRNA-1:exon:22521;Parent=Msa0701930-mRNA-1 |
chr4_4 | exon | 73367886 | 73368125 | 73367886 | ID=Msa0701930-mRNA-1:exon:22520;Parent=Msa0701930-mRNA-1 |
chr4_4 | exon | 73368984 | 73369152 | 73368984 | ID=Msa0701930-mRNA-1:exon:22519;Parent=Msa0701930-mRNA-1 |
chr4_4 | exon | 73370799 | 73371286 | 73370799 | ID=Msa0701930-mRNA-1:exon:22518;Parent=Msa0701930-mRNA-1 |
chr4_4 | exon | 73371378 | 73371488 | 73371378 | ID=Msa0701930-mRNA-1:exon:22517;Parent=Msa0701930-mRNA-1 |
chr4_4 | exon | 73371575 | 73372083 | 73371575 | ID=Msa0701930-mRNA-1:exon:22516;Parent=Msa0701930-mRNA-1 |
chr4_4 | exon | 73372205 | 73372315 | 73372205 | ID=Msa0701930-mRNA-1:exon:22515;Parent=Msa0701930-mRNA-1 |
chr4_4 | exon | 73372787 | 73373005 | 73372787 | ID=Msa0701930-mRNA-1:exon:22514;Parent=Msa0701930-mRNA-1 |
chr4_4 | exon | 73374443 | 73374610 | 73374443 | ID=Msa0701930-mRNA-1:exon:22513;Parent=Msa0701930-mRNA-1 |
chr4_4 | exon | 73374714 | 73375107 | 73374714 | ID=Msa0701930-mRNA-1:exon:22512;Parent=Msa0701930-mRNA-1 |
chr4_4 | five_prime_UTR | 73374808 | 73375107 | 73374808 | ID=Msa0701930-mRNA-1:five_prime_utr;Parent=Msa0701930-mRNA-1 |
chr4_4 | CDS | 73374714 | 73374807 | 73374714 | ID=Msa0701930-mRNA-1:cds;Parent=Msa0701930-mRNA-1 |
chr4_4 | CDS | 73374443 | 73374610 | 73374443 | ID=Msa0701930-mRNA-1:cds;Parent=Msa0701930-mRNA-1 |
chr4_4 | CDS | 73372787 | 73373005 | 73372787 | ID=Msa0701930-mRNA-1:cds;Parent=Msa0701930-mRNA-1 |
chr4_4 | CDS | 73372205 | 73372315 | 73372205 | ID=Msa0701930-mRNA-1:cds;Parent=Msa0701930-mRNA-1 |
chr4_4 | CDS | 73371575 | 73372083 | 73371575 | ID=Msa0701930-mRNA-1:cds;Parent=Msa0701930-mRNA-1 |
chr4_4 | CDS | 73371378 | 73371488 | 73371378 | ID=Msa0701930-mRNA-1:cds;Parent=Msa0701930-mRNA-1 |
chr4_4 | CDS | 73370799 | 73371286 | 73370799 | ID=Msa0701930-mRNA-1:cds;Parent=Msa0701930-mRNA-1 |
chr4_4 | CDS | 73368984 | 73369152 | 73368984 | ID=Msa0701930-mRNA-1:cds;Parent=Msa0701930-mRNA-1 |
chr4_4 | CDS | 73367886 | 73368125 | 73367886 | ID=Msa0701930-mRNA-1:cds;Parent=Msa0701930-mRNA-1 |
chr4_4 | CDS | 73367671 | 73367805 | 73367671 | ID=Msa0701930-mRNA-1:cds;Parent=Msa0701930-mRNA-1 |
chr4_4 | CDS | 73367434 | 73367565 | 73367434 | ID=Msa0701930-mRNA-1:cds;Parent=Msa0701930-mRNA-1 |
chr4_4 | three_prime_UTR | 73367130 | 73367433 | 73367130 | ID=Msa0701930-mRNA-1:three_prime_utr;Parent=Msa0701930-mRNA-1 |
Gene Sequence |
Protein sequence |