AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1369490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1369490 MtrunA17_Chr8g0380091 96.038 631 14 1 161 791 85 704 0.0 1221
Msa1369490 MtrunA17_Chr8g0380091 90.805 87 5 3 1 87 1 84 1.35e-29 125
Msa1369490 MtrunA17_Chr1g0200071 36.259 433 267 6 362 791 7 433 1.13e-89 290
Msa1369490 MtrunA17_Chr1g0200091 36.259 433 267 6 362 791 7 433 1.13e-89 290
Msa1369490 MtrunA17_Chr1g0200121 36.028 433 268 6 362 791 7 433 1.72e-89 289
Msa1369490 MtrunA17_Chr6g0458111 35.797 433 269 6 362 791 7 433 2.16e-88 286
Msa1369490 MtrunA17_Chr6g0458091 35.797 433 269 6 362 791 7 433 2.16e-88 286
Msa1369490 MtrunA17_Chr4g0005781 35.748 428 267 5 362 786 7 429 2.81e-88 286
Msa1369490 MtrunA17_Chr6g0483121 34.722 504 299 12 300 784 21 513 5.73e-85 279
Msa1369490 MtrunA17_Chr1g0156421 35.129 427 269 5 363 786 8 429 1.29e-81 268
Msa1369490 MtrunA17_Chr1g0193591 35.023 434 273 6 361 791 6 433 3.73e-81 267
Msa1369490 MtrunA17_Chr8g0340771 34.813 428 271 5 363 786 8 431 1.46e-78 260
Msa1369490 MtrunA17_Chr8g0392641 38.051 431 253 9 363 786 147 570 6.41e-78 262
Msa1369490 MtrunA17_Chr1g0150331 33.860 443 241 10 362 791 7 410 2.13e-76 253
Msa1369490 MtrunA17_Chr1g0204031 36.364 429 260 7 361 786 6 424 2.43e-76 265
Msa1369490 MtrunA17_Chr8g0336511 41.026 312 177 4 365 674 76 382 3.02e-69 233
Msa1369490 MtrunA17_Chr5g0415391 33.842 393 252 5 394 783 1 388 4.29e-63 218
Msa1369490 MtrunA17_Chr2g0318291 43.636 220 119 3 362 580 9 224 5.88e-55 189
Msa1369490 MtrunA17_Chr1g0196251 30.123 405 243 7 357 755 3 373 1.43e-50 182
Msa1369490 MtrunA17_Chr8g0340371 39.749 239 135 4 362 597 7 239 1.48e-50 177
Msa1369490 MtrunA17_Chr1g0204041 49.664 149 74 1 363 511 8 155 2.02e-42 152
Msa1369490 MtrunA17_Chr1g0156411 51.079 139 67 1 363 501 12 149 9.23e-40 143
Msa1369490 MtrunA17_Chr2g0319341 29.518 332 224 6 457 783 1 327 3.75e-39 150
Msa1369490 MtrunA17_Chr7g0259481 28.986 483 277 18 316 787 21 448 8.76e-34 135
Msa1369490 MtrunA17_Chr3g0116821 28.989 445 251 16 362 788 92 489 2.75e-32 131
Msa1369490 MtrunA17_Chr2g0298371 27.273 330 213 7 457 781 1 308 1.28e-28 117
Msa1369490 MtrunA17_Chr2g0287231 30.041 243 132 6 362 599 16 225 3.09e-25 105
Msa1369490 MtrunA17_Chr8g0341021 43.878 98 55 0 362 459 8 105 1.16e-23 96.3
Msa1369490 MtrunA17_Chr2g0298381 47.826 92 48 0 363 454 8 99 2.22e-23 95.5
Msa1369490 MtrunA17_Chr1g0211481 40.230 87 52 0 362 448 6 92 4.54e-16 74.3
Msa1369490 MtrunA17_Chr2g0319351 46.667 75 40 0 358 432 3 77 7.98e-16 73.2
Msa1369490 MtrunA17_Chr4g0040791 26.119 268 157 8 364 624 59 292 5.43e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1369490 AT5G10630.3 56.208 749 266 11 44 789 48 737 0.0 815
Msa1369490 AT5G10630.4 55.526 751 273 10 44 789 48 742 0.0 812
Msa1369490 AT5G10630.1 58.926 633 205 7 159 789 87 666 0.0 734
Msa1369490 AT5G10630.5 58.926 633 205 7 159 789 88 667 0.0 734
Msa1369490 AT5G10630.2 58.926 633 205 7 159 789 88 667 0.0 734
Msa1369490 AT1G07920.1 36.215 428 265 5 362 786 7 429 1.52e-87 284
Msa1369490 AT1G07940.4 36.215 428 265 5 362 786 7 429 1.52e-87 284
Msa1369490 AT1G07940.1 36.215 428 265 5 362 786 7 429 1.52e-87 284
Msa1369490 AT1G07940.2 36.215 428 265 5 362 786 7 429 1.52e-87 284
Msa1369490 AT1G07940.3 36.215 428 265 5 362 786 7 429 1.52e-87 284
Msa1369490 AT5G60390.3 36.215 428 265 5 362 786 7 429 1.52e-87 284
Msa1369490 AT5G60390.1 36.215 428 265 5 362 786 7 429 1.52e-87 284
Msa1369490 AT5G60390.2 36.215 428 265 5 362 786 7 429 1.52e-87 284
Msa1369490 AT1G07930.1 36.215 428 265 5 362 786 7 429 1.52e-87 284
Msa1369490 AT1G18070.1 36.047 430 265 7 363 787 102 526 1.55e-81 271
Msa1369490 AT1G18070.2 36.047 430 265 7 363 787 102 526 1.55e-81 271
Msa1369490 AT1G18070.3 34.694 441 267 7 363 787 102 537 4.70e-78 262
Msa1369490 AT1G07930.2 45.161 248 130 3 362 607 7 250 3.44e-67 227
Msa1369490 AT4G20360.1 28.315 445 254 16 362 788 79 476 1.49e-35 141
Msa1369490 AT4G20360.2 28.315 445 254 16 362 788 79 476 1.49e-35 141
Msa1369490 AT4G02930.1 28.604 437 251 15 362 787 67 453 1.71e-30 126
Msa1369490 AT2G31060.2 26.619 278 165 7 353 624 50 294 1.27e-15 81.6
Msa1369490 AT2G31060.3 26.950 282 163 8 353 624 50 298 1.92e-15 80.9
Msa1369490 AT2G45030.1 31.977 172 94 7 341 512 48 196 2.00e-11 68.2
Msa1369490 AT1G45332.1 32.335 167 90 7 346 512 53 196 2.00e-11 68.2
Msa1369490 AT5G13650.2 27.899 276 151 11 364 630 85 321 5.77e-11 66.6
Msa1369490 AT5G13650.1 27.899 276 151 11 364 630 84 320 6.23e-11 66.6

Find 194 sgRNAs with CRISPR-Local

Find 551 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGCCTACATTCTTCAAAAT+TGG 0.138581 tig0018829:+9123 Msa1369490:CDS
TTTATCCCAAACATGATTTC+TGG 0.174281 tig0018829:+10250 Msa1369490:CDS
TGAATCGGGAAGCGAATATT+AGG 0.230338 tig0018829:-6409 None:intergenic
TGGAAATATCACAACCTCTT+TGG 0.241546 tig0018829:-8462 None:intergenic
TATAAAATCAAATCGGTCTT+TGG 0.261931 tig0018829:-10443 None:intergenic
CCAAACTCCAGGTGGCTTAA+TGG 0.264147 tig0018829:-6815 None:intergenic
ATGGTCTCTTTCTTTGTATC+AGG 0.265545 tig0018829:-6796 None:intergenic
GGTAAAACCTAATTGGTCTA+TGG 0.273561 tig0018829:-6519 None:intergenic
TTGTTCTTCCTAAAGATCTA+AGG 0.277201 tig0018829:-13881 None:intergenic
TGCCATGGAAAATCAAAATT+TGG 0.281045 tig0018829:+10537 Msa1369490:CDS
TAGGTTGGTCATGTTGATTC+TGG 0.286553 tig0018829:+9901 Msa1369490:intron
ATCTAAAGTACAAATGGTTT+TGG 0.291277 tig0018829:+6306 Msa1369490:five_prime_UTR
AATTAATCCATAGACCAATT+AGG 0.304473 tig0018829:+6512 Msa1369490:five_prime_UTR
CTTCTTAATGCTTCACTTGA+TGG 0.308805 tig0018829:+14241 Msa1369490:three_prime_UTR
CCATTAAGCCACCTGGAGTT+TGG 0.317368 tig0018829:+6815 Msa1369490:CDS
GGAAATATCACAACCTCTTT+GGG 0.319630 tig0018829:-8461 None:intergenic
TGGTAGGTTATTACACCTAT+TGG 0.325002 tig0018829:+9939 Msa1369490:CDS
TTATCACTCTCTTCAACTTT+TGG 0.331231 tig0018829:-9596 None:intergenic
AGAGTATCCCTTAGATCTTT+AGG 0.333295 tig0018829:+13873 Msa1369490:CDS
CCCTCAACCTATCTGTCTTC+AGG 0.341132 tig0018829:+9163 Msa1369490:CDS
GGTGTCTGCTTGTGGGAAAC+TGG 0.341397 tig0018829:+12346 Msa1369490:CDS
TAATTCTTGTTGAGCTTCTC+TGG 0.348361 tig0018829:+14058 Msa1369490:three_prime_UTR
GATGGAAAACAGATGTTTAC+TGG 0.353038 tig0018829:-14003 None:intergenic
TGAAAAGGAGGCCAAGTTAC+AGG 0.354078 tig0018829:+9993 Msa1369490:CDS
TATTCCCCTTTCCCTTTCTT+CGG 0.355806 tig0018829:-10149 None:intergenic
TCTGGAAAATCAACACTATC+TGG 0.356467 tig0018829:+9919 Msa1369490:CDS
TTGGTCACCTTACCAGTCTT+GGG 0.356517 tig0018829:-13642 None:intergenic
TCATTGTGAAACAGGTATAC+TGG 0.358470 tig0018829:+12215 Msa1369490:intron
TTTGGTCACCTTACCAGTCT+TGG 0.360911 tig0018829:-13643 None:intergenic
GCACAACTTATTAGAAGTTT+CGG 0.362581 tig0018829:+10370 Msa1369490:CDS
AAATGCTTTGCAACTGCAAC+AGG 0.363737 tig0018829:-13418 None:intergenic
TGTTGCAGTTGCAAAGCATT+TGG 0.363927 tig0018829:+13420 Msa1369490:CDS
AGAAGAAGGTGGGGTTTGAT+TGG 0.367458 tig0018829:-6443 None:intergenic
GCATAGTTTCCTTTGTCCTT+TGG 0.368485 tig0018829:-9494 None:intergenic
GAAGTTGAATCTGAAAATTA+TGG 0.370235 tig0018829:+6660 Msa1369490:CDS
CACCTGAGCGCCGATCAATA+TGG 0.377052 tig0018829:-13476 None:intergenic
TCAAAGATTCTTCTCTCTCA+TGG 0.378500 tig0018829:+10503 Msa1369490:CDS
AGCTATCTATGATACATATA+TGG 0.378574 tig0018829:-14151 None:intergenic
GATTTGATAACATCACATAT+TGG 0.379852 tig0018829:-12308 None:intergenic
TCTATTCTAGCTAAAGTAGA+TGG 0.383472 tig0018829:-14021 None:intergenic
ATGCCGCGTAAAGTAAACTA+TGG 0.383974 tig0018829:+6588 Msa1369490:CDS
AGTCTTGGGTAAAACCTAAT+TGG 0.384317 tig0018829:-6526 None:intergenic
GGCCTACATTCTTCAAAATT+GGG 0.384535 tig0018829:+9124 Msa1369490:CDS
CCAGTATGAACCACATCATC+TGG 0.394923 tig0018829:-9103 None:intergenic
GTGAAGACCTATATTTAAAG+AGG 0.395003 tig0018829:-8591 None:intergenic
TTGGTTAATTAAATCTGAAT+CGG 0.395124 tig0018829:-6424 None:intergenic
GAACAACATACATGGTATAC+AGG 0.395720 tig0018829:-13981 None:intergenic
GTTGTCTGCACTTTCAGTAT+TGG 0.398903 tig0018829:-9375 None:intergenic
AGAATTTCATGAAATTCATA+AGG 0.403160 tig0018829:+8547 Msa1369490:CDS
CCAGATGATGTGGTTCATAC+TGG 0.403541 tig0018829:+9103 Msa1369490:CDS
AGTTAGAAGAAACTCGTAGT+AGG 0.412268 tig0018829:+6339 Msa1369490:five_prime_UTR
GGTAGGTTATTACACCTATT+GGG 0.413223 tig0018829:+9940 Msa1369490:CDS
AAGGATCCTTTGCTTATGCT+TGG 0.413794 tig0018829:+10110 Msa1369490:CDS
CATGCTCTCGTCATTGTCAT+AGG 0.414774 tig0018829:-6854 None:intergenic
AGGATCCTTTGCTTATGCTT+GGG 0.420061 tig0018829:+10111 Msa1369490:CDS
ACCTGAGCGCCGATCAATAT+GGG 0.424114 tig0018829:-13475 None:intergenic
GTAGCTCCAGAAATCATGTT+TGG 0.427200 tig0018829:-10256 None:intergenic
TCTTGGAAATTCGTCCCAAT+AGG 0.427436 tig0018829:-9954 None:intergenic
TATACTGGACCTTATCTGTT+AGG 0.427875 tig0018829:+12230 Msa1369490:CDS
GCCTGCTCTGTTGCAAGAGC+TGG 0.427988 tig0018829:+13316 Msa1369490:CDS
GTTGTTGTGCTTGACTCTCC+TGG 0.435036 tig0018829:+10217 Msa1369490:CDS
AACTGTGTGGTTAAAACTGC+TGG 0.439302 tig0018829:-9663 None:intergenic
GTTATGCCTTCAGATGTTGT+TGG 0.441394 tig0018829:+13262 Msa1369490:CDS
GAATTTCATGAAATTCTCCT+TGG 0.443794 tig0018829:-8541 None:intergenic
GAAATTGATCTCGAAACAAT+TGG 0.448800 tig0018829:+9440 Msa1369490:CDS
GAACTTTGAGATCTTGCATC+AGG 0.458431 tig0018829:-9686 None:intergenic
TTCTTAATGCTTCACTTGAT+GGG 0.460195 tig0018829:+14242 Msa1369490:three_prime_UTR
TCCCATATTGATCGGCGCTC+AGG 0.462273 tig0018829:+13474 Msa1369490:CDS
ACCTCCAACATCAACAAAAC+AGG 0.463396 tig0018829:+6931 Msa1369490:CDS
ATGACTTGCTGTGATATTTG+TGG 0.468111 tig0018829:+6874 Msa1369490:CDS
CTTGTTATAGATGCCTCACT+TGG 0.468135 tig0018829:+10298 Msa1369490:CDS
GGAGTTGAAATTGCTTGTCT+TGG 0.469748 tig0018829:+13441 Msa1369490:CDS
AGACAAATCTAAAGTACAAA+TGG 0.470127 tig0018829:+6300 Msa1369490:five_prime_UTR
TGGTTAATTAAATCTGAATC+GGG 0.471055 tig0018829:-6423 None:intergenic
TGGCGTTCTACGTCACCCCT+TGG 0.471157 tig0018829:+6894 Msa1369490:CDS
TAAGCAGTTAACAGAGTCTT+GGG 0.472195 tig0018829:-6540 None:intergenic
TAGCTCCAGAAATCATGTTT+GGG 0.472643 tig0018829:-10255 None:intergenic
TTGATGAAAGTTCCGAAGAA+AGG 0.474986 tig0018829:+10137 Msa1369490:CDS
CGGTGAAATTACCTGTAACT+TGG 0.479336 tig0018829:-10004 None:intergenic
GCAACTGCAACAGGAAAGTC+AGG 0.482006 tig0018829:-13409 None:intergenic
GCCTGAAGACAGATAGGTTG+AGG 0.483421 tig0018829:-9164 None:intergenic
TCACTTGGTGCATTTGAAGC+TGG 0.485978 tig0018829:+10313 Msa1369490:CDS
AGCCATCCCTCTTTAAATAT+AGG 0.486162 tig0018829:+8584 Msa1369490:CDS
CGTCACCCCTTGGTTATCAA+TGG 0.487239 tig0018829:+6904 Msa1369490:CDS
TTCTGATAATACTAATGCTA+AGG 0.487271 tig0018829:+9706 Msa1369490:CDS
GAATCGGGAAGCGAATATTA+GGG 0.487500 tig0018829:-6408 None:intergenic
TTAGGAAGAACAATAGCTGT+TGG 0.488448 tig0018829:+13891 Msa1369490:CDS
GTAACGTTGCATGGTGTTGA+TGG 0.492360 tig0018829:+13352 Msa1369490:CDS
GAAGATACAAACAAAACTCC+TGG 0.493452 tig0018829:+8389 Msa1369490:CDS
GATGTCTTATAAAATCAAAT+CGG 0.494118 tig0018829:-10450 None:intergenic
TGATGAAAGTTCCGAAGAAA+GGG 0.495673 tig0018829:+10138 Msa1369490:CDS
TGGTGCATTTGAAGCTGGTA+TGG 0.496309 tig0018829:+10318 Msa1369490:CDS
AAGGACAGGTGTCTGCTTGT+GGG 0.496837 tig0018829:+12339 Msa1369490:CDS
ACATGTGAATTATGTAAAGA+TGG 0.497583 tig0018829:+14084 Msa1369490:three_prime_UTR
GTTACAGCCTGAAGACAGAT+AGG 0.502890 tig0018829:-9170 None:intergenic
TGAAAAGATGAGAAGAAGGT+GGG 0.503608 tig0018829:-6453 None:intergenic
TTGAAATTGCTTGTCTTGGA+TGG 0.504009 tig0018829:+13445 Msa1369490:CDS
TCTTCAAAATTGGGTTTGAA+AGG 0.509780 tig0018829:+9133 Msa1369490:CDS
TTTCTTACCAGCCAGAAAAG+TGG 0.510046 tig0018829:+9744 Msa1369490:CDS
TCCAGCTCTTGCAACAGAGC+AGG 0.514025 tig0018829:-13317 None:intergenic
TTACTACGACGATGACTATG+AGG 0.515875 tig0018829:+6617 Msa1369490:CDS
CAAATCAACTGCACAAGGAC+AGG 0.517566 tig0018829:+12325 Msa1369490:CDS
ATAAGCAGTTAACAGAGTCT+TGG 0.518813 tig0018829:-6541 None:intergenic
TATAGTTGCAGTAAATAAGA+TGG 0.519968 tig0018829:+10405 Msa1369490:CDS
AAAACAAAGTGCAGTAATTG+AGG 0.522478 tig0018829:+13689 Msa1369490:CDS
AATAACCATGACAGTGGCTG+TGG 0.522889 tig0018829:+10168 Msa1369490:CDS
GCTGGTATGGATGGCGGCAA+AGG 0.523737 tig0018829:+10331 Msa1369490:CDS
GTTAGAAGAAACTCGTAGTA+GGG 0.525160 tig0018829:+6340 Msa1369490:five_prime_UTR
CCTGAAGACAGATAGGTTGA+GGG 0.527815 tig0018829:-9163 None:intergenic
GACCTATATTTAAAGAGGGA+TGG 0.530219 tig0018829:-8586 None:intergenic
TGGGCCAACTTGGATGCTCC+AGG 0.530831 tig0018829:-8407 None:intergenic
GGAATGTTTCTCCGCTCATG+TGG 0.531170 tig0018829:+10478 Msa1369490:CDS
ACCTCTTTGGGACTCTGTTG+TGG 0.535011 tig0018829:-8449 None:intergenic
TGTTCTTCCTAAAGATCTAA+GGG 0.536816 tig0018829:-13880 None:intergenic
CAATCAAGCAAAGAAAAGTC+CGG 0.537201 tig0018829:+9557 Msa1369490:CDS
CAGTATGAACCACATCATCT+GGG 0.538586 tig0018829:-9102 None:intergenic
GCTTGTGGGAAACTGGAAGC+AGG 0.540683 tig0018829:+12353 Msa1369490:CDS
AATATTCTTGAAACTCTAGC+AGG 0.541627 tig0018829:-13606 None:intergenic
CGTTCCATCCCCAGATGATG+TGG 0.542606 tig0018829:+9093 Msa1369490:CDS
GAATTGAAAAGATGAGAAGA+AGG 0.542714 tig0018829:-6457 None:intergenic
CGGGAAGCGAATATTAGGGT+TGG 0.549747 tig0018829:-6404 None:intergenic
TCTGATAATACTAATGCTAA+GGG 0.556699 tig0018829:+9707 Msa1369490:CDS
TCAGTACTTGATCCCAAGAC+TGG 0.558515 tig0018829:+13630 Msa1369490:CDS
GGGATAAAATCTTTATGACC+AGG 0.560214 tig0018829:-10235 None:intergenic
TTTGCGAATTCTCTAGTAGG+AGG 0.562911 tig0018829:-12272 None:intergenic
TTGAAAAGATGAGAAGAAGG+TGG 0.562911 tig0018829:-6454 None:intergenic
CAAGGACAGGTGTCTGCTTG+TGG 0.563524 tig0018829:+12338 Msa1369490:CDS
CTCTCCAATGTCATCACTGT+CGG 0.565413 tig0018829:-13954 None:intergenic
ATGGATTCCCTTGAGTGCCA+TGG 0.565826 tig0018829:+10522 Msa1369490:CDS
GATGGAACGTCAAACTTGAA+AGG 0.569290 tig0018829:-9079 None:intergenic
TGGAGTTAAACAAGTATGAT+CGG 0.570030 tig0018829:-6384 None:intergenic
ATAGAGCAACTCCAAACTCC+AGG 0.571736 tig0018829:-6826 None:intergenic
TGAAGACCTATATTTAAAGA+GGG 0.572542 tig0018829:-8590 None:intergenic
AAAGTTCCGAAGAAAGGGAA+AGG 0.572545 tig0018829:+10143 Msa1369490:CDS
GCATTTGAAGCTGGTATGGA+TGG 0.575093 tig0018829:+10322 Msa1369490:CDS
AAGTTCCGAAGAAAGGGAAA+GGG 0.576526 tig0018829:+10144 Msa1369490:CDS
GAAAATCAACACTATCTGGT+AGG 0.578600 tig0018829:+9923 Msa1369490:CDS
GAAGAAACTCGTAGTAGGGA+TGG 0.578809 tig0018829:+6344 Msa1369490:five_prime_UTR
GATGGAAGTCATGTATTGGC+TGG 0.579310 tig0018829:+13370 Msa1369490:CDS
TGGTAGTGCAGACAAACTAC+CGG 0.582720 tig0018829:-9576 None:intergenic
TCAACTGCACCTAACAGATA+AGG 0.583815 tig0018829:-12239 None:intergenic
AACTCCTGGAGCATCCAAGT+TGG 0.584320 tig0018829:+8403 Msa1369490:CDS
GTGGTTCCATTGATAACCAA+GGG 0.585825 tig0018829:-6910 None:intergenic
AGTTTGTCTTCTAACAAAGA+CGG 0.587145 tig0018829:+9623 Msa1369490:CDS
ACTTGATCCCAAGACTGGTA+AGG 0.592506 tig0018829:+13635 Msa1369490:CDS
GAATGTTTCTCCGCTCATGT+GGG 0.593120 tig0018829:+10479 Msa1369490:CDS
TGTTGATGGAAGTCATGTAT+TGG 0.598052 tig0018829:+13366 Msa1369490:CDS
TCACATATTGGCATTAGCAG+AGG 0.599164 tig0018829:-12296 None:intergenic
AAAGAGACCATTAAGCCACC+TGG 0.599671 tig0018829:+6808 Msa1369490:CDS
GGTACAAGTCCCATATTGAT+CGG 0.599737 tig0018829:+13466 Msa1369490:CDS
GAAAACTCTACCACACAGAC+TGG 0.600136 tig0018829:-13831 None:intergenic
CTTATCAGCATCTTTGCCAA+AGG 0.600455 tig0018829:+9478 Msa1369490:CDS
AGCTTCAAATGCACCAAGTG+AGG 0.601580 tig0018829:-10311 None:intergenic
TACAAGCTTGAGAATGTCCA+AGG 0.604749 tig0018829:+8524 Msa1369490:CDS
CTGCAACAGGAAAGTCAGGA+TGG 0.610280 tig0018829:-13405 None:intergenic
ACTGTTCCAACAACATCTGA+AGG 0.610526 tig0018829:-13268 None:intergenic
AATGTAGCTGTAACGTTGCA+TGG 0.611588 tig0018829:+13343 Msa1369490:CDS
ATATTTCCAATGCAAGACGT+TGG 0.614432 tig0018829:+8476 Msa1369490:CDS
GTTTACTGGAACAACATACA+TGG 0.617374 tig0018829:-13989 None:intergenic
GAAGCAGGAGCTCTTCGAAG+TGG 0.618457 tig0018829:+12368 Msa1369490:CDS
CTTATACCAAACTCATTCGA+CGG 0.618581 tig0018829:+6559 Msa1369490:five_prime_UTR
ATATGCCACAGCCACTGTCA+TGG 0.621453 tig0018829:-10173 None:intergenic
TATTTACTGCAACTATAACA+TGG 0.621754 tig0018829:-10399 None:intergenic
GAAAAGATGAGAAGAAGGTG+GGG 0.621861 tig0018829:-6452 None:intergenic
GCATCTTTGCCAAAGGACAA+AGG 0.623123 tig0018829:+9485 Msa1369490:CDS
TGTTGGAACAGTGCGTACAT+TGG 0.629022 tig0018829:+13279 Msa1369490:CDS
AGTTCCGAAGAAAGGGAAAG+GGG 0.633252 tig0018829:+10145 Msa1369490:CDS
GCCACAACAGAGTCCCAAAG+AGG 0.634314 tig0018829:+8448 Msa1369490:CDS
ATTCCATAGTTTACTTTACG+CGG 0.636455 tig0018829:-6591 None:intergenic
TGAACCACATCATCTGGGGA+TGG 0.637515 tig0018829:-9097 None:intergenic
AACAACATACATGGTATACA+GGG 0.638847 tig0018829:-13980 None:intergenic
GAAGACAGATAGGTTGAGGG+AGG 0.639115 tig0018829:-9160 None:intergenic
TTTGAAATGAGCATCAGAAG+GGG 0.646193 tig0018829:-10566 None:intergenic
TATGCCGACAGTGATGACAT+TGG 0.648877 tig0018829:+13950 Msa1369490:three_prime_UTR
GGTGGTTCCATTGATAACCA+AGG 0.649942 tig0018829:-6911 None:intergenic
AATCTTTGAACCCACATGAG+CGG 0.652547 tig0018829:-10489 None:intergenic
AAGTGCCCAAGCATAAGCAA+AGG 0.652690 tig0018829:-10116 None:intergenic
AACGTATCTTCAGATTGTTG+AGG 0.653220 tig0018829:-9773 None:intergenic
TGGTAAGAAACTTGTTGATG+AGG 0.658411 tig0018829:-9731 None:intergenic
AGCTCTTCGAAGTGGAACAA+AGG 0.662831 tig0018829:+12376 Msa1369490:CDS
AAGACAGATAGGTTGAGGGA+GGG 0.666145 tig0018829:-9159 None:intergenic
AGTCTAGACTTGTTGAACAG+AGG 0.675071 tig0018829:+14198 Msa1369490:three_prime_UTR
CGACAGTGATGACATTGGAG+AGG 0.678192 tig0018829:+13955 Msa1369490:three_prime_UTR
AGTATGAACCACATCATCTG+GGG 0.679020 tig0018829:-9101 None:intergenic
GGAAGTCATGTATTGGCTGG+AGG 0.683079 tig0018829:+13373 Msa1369490:CDS
TTAGCTAGAATAGACAATGG+CGG 0.694247 tig0018829:+14030 Msa1369490:three_prime_UTR
GAGCAACTCCAAACTCCAGG+TGG 0.698932 tig0018829:-6823 None:intergenic
ACTTTAGCTAGAATAGACAA+TGG 0.704196 tig0018829:+14027 Msa1369490:three_prime_UTR
GTTATCAAATCAACTGCACA+AGG 0.705068 tig0018829:+12320 Msa1369490:CDS
AAGGGGAATAACCATGACAG+TGG 0.707209 tig0018829:+10162 Msa1369490:CDS
TTTGAAGCTGGTATGGATGG+CGG 0.707438 tig0018829:+10325 Msa1369490:CDS
TTTGCACGAGCCAGTCTGTG+TGG 0.717109 tig0018829:+13821 Msa1369490:CDS
TGGTTCCATTGATAACCAAG+GGG 0.738907 tig0018829:-6909 None:intergenic
ATCTTGCATCAGGAACTGTG+TGG 0.809595 tig0018829:-9676 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTATTTTAAAATTTT+TGG + tig0018829:12679-12698 Msa1369490:intron 0.0%
!! AAAATAAATTCTTCAAAAAT+TGG + tig0018829:9521-9540 Msa1369490:CDS 10.0%
!! CTAAAGTAAATTATAAAATT+TGG + tig0018829:12874-12893 Msa1369490:intron 10.0%
!! TAAATTATAAAATTTGGAAA+AGG + tig0018829:12880-12899 Msa1369490:intron 10.0%
!!! TGTTTATTTTTAAATATGAT+GGG - tig0018829:13131-13150 None:intergenic 10.0%
!!! ATGTTTATTTTTAAATATGA+TGG - tig0018829:13132-13151 None:intergenic 10.0%
!! ATCATATTTAAAAATAAACA+TGG + tig0018829:13131-13150 Msa1369490:intron 10.0%
!!! TATTTTTTAATATTGCTTAT+TGG + tig0018829:13518-13537 Msa1369490:intron 10.0%
!!! ATTTTTTAATATTGCTTATT+GGG + tig0018829:13519-13538 Msa1369490:intron 10.0%
!! TACAACTATTAATGAATAAA+TGG - tig0018829:6962-6981 None:intergenic 15.0%
!! TAAAATGATATAAAATTCGT+GGG + tig0018829:7790-7809 Msa1369490:intron 15.0%
!! TCCTTATTAATAAAATAGTT+AGG + tig0018829:8760-8779 Msa1369490:intron 15.0%
!!! ACCTAACTATTTTATTAATA+AGG - tig0018829:8764-8783 None:intergenic 15.0%
!! TTATTAATAAAATAGTTAGG+TGG + tig0018829:8763-8782 Msa1369490:intron 15.0%
!! TTAGAATAAAAGATCTTATT+AGG + tig0018829:8923-8942 Msa1369490:intron 15.0%
!! TAAAAATAAATGGTTATGTA+AGG - tig0018829:9019-9038 None:intergenic 15.0%
!! CACTATTGTTTAAAAATAAA+TGG - tig0018829:9029-9048 None:intergenic 15.0%
!! AACATGAAAAAACTAAATAT+GGG - tig0018829:9238-9257 None:intergenic 15.0%
!! AAACATGAAAAAACTAAATA+TGG - tig0018829:9239-9258 None:intergenic 15.0%
!!! TAAAAATGTTTTTGAATTGT+TGG + tig0018829:10659-10678 Msa1369490:intron 15.0%
!!! TTAGATTTAGAATGATTATT+GGG - tig0018829:11293-11312 None:intergenic 15.0%
!!! ATTAGATTTAGAATGATTAT+TGG - tig0018829:11294-11313 None:intergenic 15.0%
!! AATAATCATTCTAAATCTAA+TGG + tig0018829:11293-11312 Msa1369490:intron 15.0%
!! TTAACTTAATCTTAATTTAG+TGG + tig0018829:11408-11427 Msa1369490:intron 15.0%
!! AACATACTAATAAATCAATA+TGG - tig0018829:11822-11841 None:intergenic 15.0%
!!! TGATGTAATTTGTAAATTAA+TGG - tig0018829:12616-12635 None:intergenic 15.0%
!! AATTGATACAAAAAAATGAT+CGG - tig0018829:13064-13083 None:intergenic 15.0%
!! ATATTAAAAAATAAAGTGCA+GGG - tig0018829:13511-13530 None:intergenic 15.0%
!! AATATTAAAAAATAAAGTGC+AGG - tig0018829:13512-13531 None:intergenic 15.0%
!!! CAATTTTCTTTTTTCTATAT+TGG + tig0018829:13550-13569 Msa1369490:intron 15.0%
!! TTGGTTAATTAAATCTGAAT+CGG - tig0018829:6427-6446 None:intergenic 20.0%
!!! TTGTAATTTAGTTTAGTACT+AGG + tig0018829:6977-6996 Msa1369490:intron 20.0%
!! AACACAATTTACTAATTTGA+CGG - tig0018829:7413-7432 None:intergenic 20.0%
!!! TAACTTGTTTTTCATAGTAA+TGG - tig0018829:7762-7781 None:intergenic 20.0%
!! GTAAAATGATATAAAATTCG+TGG + tig0018829:7789-7808 Msa1369490:intron 20.0%
!!! AGTTAATTATCAATTTTGCT+TGG - tig0018829:8177-8196 None:intergenic 20.0%
!!! AAGCAAAATTGATAATTAAC+TGG + tig0018829:8176-8195 Msa1369490:intron 20.0%
!! AGAATTTCATGAAATTCATA+AGG + tig0018829:8547-8566 Msa1369490:CDS 20.0%
!! AAAAGACATTTAATATGAGA+TGG - tig0018829:8685-8704 None:intergenic 20.0%
!!! CTCATATTAAATGTCTTTTA+AGG + tig0018829:8686-8705 Msa1369490:intron 20.0%
!!! AGTGATCAAATCTTTTTTAT+TGG + tig0018829:9045-9064 Msa1369490:intron 20.0%
!!! TTTTTTTTTGGTTAAAGCTA+GGG - tig0018829:9203-9222 None:intergenic 20.0%
!!! TTTTTTTTTTGGTTAAAGCT+AGG - tig0018829:9204-9223 None:intergenic 20.0%
!!! GGAAAATCTACTTTTTTTTT+TGG - tig0018829:9215-9234 None:intergenic 20.0%
!! ACATGAAAAAACTAAATATG+GGG - tig0018829:9237-9256 None:intergenic 20.0%
!! TACATCAATATTTATCCAAA+AGG - tig0018829:9267-9286 None:intergenic 20.0%
!!! TTAAAAACTCTAAAGATTCT+CGG + tig0018829:9315-9334 Msa1369490:CDS 20.0%
!! AAAAAATAAAAATGACTCCA+CGG - tig0018829:10027-10046 None:intergenic 20.0%
!! GATGTCTTATAAAATCAAAT+CGG - tig0018829:10453-10472 None:intergenic 20.0%
!! AAAAACTTAATTAACCCTAT+AGG - tig0018829:10751-10770 None:intergenic 20.0%
!!! TATAGGGTTAATTAAGTTTT+TGG + tig0018829:10750-10769 Msa1369490:intron 20.0%
!! AAAACTTAATTAACCCTATA+GGG - tig0018829:10750-10769 None:intergenic 20.0%
!! AAAAACTTAATTAACCCTAT+AGG - tig0018829:10751-10770 None:intergenic 20.0%
!! CAAAACTGTGAATATTTATA+GGG - tig0018829:10846-10865 None:intergenic 20.0%
!! ACAAAACTGTGAATATTTAT+AGG - tig0018829:10847-10866 None:intergenic 20.0%
!! CATAATATATTAACCCTATA+GGG - tig0018829:10892-10911 None:intergenic 20.0%
!! TCATAATATATTAACCCTAT+AGG - tig0018829:10893-10912 None:intergenic 20.0%
!!! TAATTTTGTTAACGTATCTT+AGG + tig0018829:11055-11074 Msa1369490:intron 20.0%
!! TCTAAATCTAATGGTAAAAT+TGG + tig0018829:11302-11321 Msa1369490:intron 20.0%
!! AACTAACACAATTAACAAAA+TGG - tig0018829:11504-11523 None:intergenic 20.0%
!!! CAAAATCTATTTTCTCAATT+GGG - tig0018829:11798-11817 None:intergenic 20.0%
!! AATTTACCCAAATCAAAATT+AGG + tig0018829:12074-12093 Msa1369490:intron 20.0%
!! ATTTACCCAAATCAAAATTA+GGG + tig0018829:12075-12094 Msa1369490:intron 20.0%
!! ATTGATACAAAAAAATGATC+GGG - tig0018829:13063-13082 None:intergenic 20.0%
!!! AAACTATTTCTTGTAATATG+TGG + tig0018829:13155-13174 Msa1369490:intron 20.0%
!!! TTCTATTGTTTCTAATATTC+AGG + tig0018829:13794-13813 Msa1369490:intron 20.0%
!!! AGTTTTTTTTCCTTTCTTTT+TGG + tig0018829:14117-14136 Msa1369490:three_prime_UTR 20.0%
!! AGACAAATCTAAAGTACAAA+TGG + tig0018829:6300-6319 Msa1369490:five_prime_UTR 25.0%
!!! ATCTAAAGTACAAATGGTTT+TGG + tig0018829:6306-6325 Msa1369490:five_prime_UTR 25.0%
! TGGTTAATTAAATCTGAATC+GGG - tig0018829:6426-6445 None:intergenic 25.0%
! AATTAATCCATAGACCAATT+AGG + tig0018829:6512-6531 Msa1369490:five_prime_UTR 25.0%
! GAAGTTGAATCTGAAAATTA+TGG + tig0018829:6660-6679 Msa1369490:CDS 25.0%
!! GTTTGTGTTATTAAATAAGC+AGG + tig0018829:6763-6782 Msa1369490:intron 25.0%
! TCGTTCAATAACAACTTTAA+CGG - tig0018829:7118-7137 None:intergenic 25.0%
! AACATCAACATTATGTGTAA+TGG - tig0018829:7298-7317 None:intergenic 25.0%
! TATTGAAATCCTCTAATTAC+AGG + tig0018829:7444-7463 Msa1369490:intron 25.0%
! ATTGAAATCCTCTAATTACA+GGG + tig0018829:7445-7464 Msa1369490:intron 25.0%
!!! GTTTTTAAAAAACAGGAGAA+GGG - tig0018829:7524-7543 None:intergenic 25.0%
!!! AGTTTTTAAAAAACAGGAGA+AGG - tig0018829:7525-7544 None:intergenic 25.0%
!!! TTTGGGAGTTTTTAAAAAAC+AGG - tig0018829:7531-7550 None:intergenic 25.0%
!!! TCATGCTATTATTTCTGATA+TGG + tig0018829:7683-7702 Msa1369490:intron 25.0%
!!! CATGCTATTATTTCTGATAT+GGG + tig0018829:7684-7703 Msa1369490:intron 25.0%
!!! GCTTGGTTATTTTAATTCAT+CGG - tig0018829:8160-8179 None:intergenic 25.0%
!! AATTGATAATTAACTGGTCT+TGG + tig0018829:8182-8201 Msa1369490:intron 25.0%
! TGAAGACCTATATTTAAAGA+GGG - tig0018829:8593-8612 None:intergenic 25.0%
! GACTGTGATAGAATAAATAA+GGG + tig0018829:8785-8804 Msa1369490:intron 25.0%
!!! ATGTGCTATGTTTTAGTTTT+TGG + tig0018829:8970-8989 Msa1369490:intron 25.0%
!!! TCAAATCTTTTTTATTGGAG+TGG + tig0018829:9050-9069 Msa1369490:intron 25.0%
! CATGAAAAAACTAAATATGG+GGG - tig0018829:9236-9255 None:intergenic 25.0%
!!! TTTCATGTTTTAGTTCCTTT+TGG + tig0018829:9249-9268 Msa1369490:intron 25.0%
!! GAGATCAATTTCTACATTTT+TGG - tig0018829:9432-9451 None:intergenic 25.0%
! TCTTCAAAAATTGGTACAAA+TGG + tig0018829:9530-9549 Msa1369490:CDS 25.0%
! TTCTGATAATACTAATGCTA+AGG + tig0018829:9706-9725 Msa1369490:CDS 25.0%
! TCTGATAATACTAATGCTAA+GGG + tig0018829:9707-9726 Msa1369490:CDS 25.0%
! TTAATCTGTTAATTGTAGGT+TGG + tig0018829:9886-9905 Msa1369490:intron 25.0%
!! ATTTTTGTGCATTTCTTTCT+TGG - tig0018829:9974-9993 None:intergenic 25.0%
! AGAAATGCACAAAAATGAAA+AGG + tig0018829:9978-9997 Msa1369490:CDS 25.0%
!!! GTGGAGTCATTTTTATTTTT+TGG + tig0018829:10026-10045 Msa1369490:intron 25.0%
! TATTTACTGCAACTATAACA+TGG - tig0018829:10402-10421 None:intergenic 25.0%
! TATAGTTGCAGTAAATAAGA+TGG + tig0018829:10405-10424 Msa1369490:CDS 25.0%
! TATAAAATCAAATCGGTCTT+TGG - tig0018829:10446-10465 None:intergenic 25.0%
!!! TACCAAATTTTGATTTTCCA+TGG - tig0018829:10542-10561 None:intergenic 25.0%
!!! CAATCATGCTTTTGTTTATT+AGG + tig0018829:10717-10736 Msa1369490:intron 25.0%
!!! TATTAGGTTTTTAGTCCTAT+AGG + tig0018829:10733-10752 Msa1369490:intron 25.0%
!!! ATTAGGTTTTTAGTCCTATA+GGG + tig0018829:10734-10753 Msa1369490:intron 25.0%
! AGTAGGGTTAATTAAGTAAA+TGG - tig0018829:10789-10808 None:intergenic 25.0%
!!! CTATAGGGTTTTATTTTGTA+GGG - tig0018829:10877-10896 None:intergenic 25.0%
! CTACAAAATAAAACCCTATA+GGG + tig0018829:10876-10895 Msa1369490:intron 25.0%
!!! TTTTAACTCAGAATACGATA+TGG - tig0018829:11081-11100 None:intergenic 25.0%
! TATAATATGATACAGATACG+AGG - tig0018829:11114-11133 None:intergenic 25.0%
! TTTACTTTAATATCTCACCT+TGG + tig0018829:11573-11592 Msa1369490:intron 25.0%
! GGATTTACAAATTCATTACA+AGG - tig0018829:11619-11638 None:intergenic 25.0%
!! CCAAAATCTATTTTCTCAAT+TGG - tig0018829:11799-11818 None:intergenic 25.0%
!! CCAATTGAGAAAATAGATTT+TGG + tig0018829:11796-11815 Msa1369490:intron 25.0%
! AATATGAGAACCATAAATCA+AGG - tig0018829:11855-11874 None:intergenic 25.0%
!! CACATATTAAGTTAGGTTTT+AGG - tig0018829:11928-11947 None:intergenic 25.0%
! TTTATTCAGTCAAACTCTAA+AGG + tig0018829:11998-12017 Msa1369490:intron 25.0%
! CCTATCAAATAATCATTCTT+TGG - tig0018829:12139-12158 None:intergenic 25.0%
! CCAAAGAATGATTATTTGAT+AGG + tig0018829:12136-12155 Msa1369490:intron 25.0%
! TATAGTATGCTAAAACTTGA+TGG + tig0018829:12187-12206 Msa1369490:intron 25.0%
!! GATTTGATAACATCACATAT+TGG - tig0018829:12311-12330 None:intergenic 25.0%
! ATTAGTGTGAATCTTTCATT+TGG - tig0018829:12447-12466 None:intergenic 25.0%
!!! ATAAACACAATGAAAGCATT+GGG - tig0018829:12559-12578 None:intergenic 25.0%
!! AATAAACACAATGAAAGCAT+TGG - tig0018829:12560-12579 None:intergenic 25.0%
! AAAAAATAAAGAAGTCCCTA+TGG - tig0018829:12755-12774 None:intergenic 25.0%
! AATAGCTGGAAAAACATTTA+TGG - tig0018829:13011-13030 None:intergenic 25.0%
! AATTATTAAGGTGTACAGTT+AGG - tig0018829:13232-13251 None:intergenic 25.0%
! CTGTACACCTTAATAATTAT+AGG + tig0018829:13234-13253 Msa1369490:intron 25.0%
! ACTAGCACCTATAATTATTA+AGG - tig0018829:13244-13263 None:intergenic 25.0%
! ACATGTGAATTATGTAAAGA+TGG + tig0018829:14084-14103 Msa1369490:three_prime_UTR 25.0%
!! TAAAGCATTTCCAAAAAGAA+AGG - tig0018829:14130-14149 None:intergenic 25.0%
! AGCTATCTATGATACATATA+TGG - tig0018829:14154-14173 None:intergenic 25.0%
!!! AAAGTACAAATGGTTTTGGT+TGG + tig0018829:6310-6329 Msa1369490:five_prime_UTR 30.0%
TGGAGTTAAACAAGTATGAT+CGG - tig0018829:6387-6406 None:intergenic 30.0%
GAATTGAAAAGATGAGAAGA+AGG - tig0018829:6460-6479 None:intergenic 30.0%
ATTCCATAGTTTACTTTACG+CGG - tig0018829:6594-6613 None:intergenic 30.0%
!! TTTACCTGTTTTGTTGATGT+TGG - tig0018829:6938-6957 None:intergenic 30.0%
TTAGTTTAGTACTAGGTCTA+AGG + tig0018829:6984-7003 Msa1369490:intron 30.0%
CGTTCAATAACAACTTTAAC+GGG - tig0018829:7117-7136 None:intergenic 30.0%
TTTAAAAACTCCCAAACTAG+TGG + tig0018829:7535-7554 Msa1369490:intron 30.0%
! AAGACAATAAAGCTTTGTCT+CGG - tig0018829:7601-7620 None:intergenic 30.0%
!! AGACAAAGCTTTATTGTCTT+AGG + tig0018829:7601-7620 Msa1369490:intron 30.0%
!! AAGCTTTATTGTCTTAGGTA+AGG + tig0018829:7606-7625 Msa1369490:intron 30.0%
!! ATTGATTGGCTTGTTTGATA+TGG + tig0018829:7643-7662 Msa1369490:intron 30.0%
!! TTATTTCTGATATGGGAAGA+TGG + tig0018829:7691-7710 Msa1369490:intron 30.0%
! TATTTCTGATATGGGAAGAT+GGG + tig0018829:7692-7711 Msa1369490:intron 30.0%
GAAACTACAACTTTATTCGA+TGG - tig0018829:7905-7924 None:intergenic 30.0%
TGAGTGACAATTTCGTTTAT+AGG + tig0018829:8066-8085 Msa1369490:intron 30.0%
GAGTGACAATTTCGTTTATA+GGG + tig0018829:8067-8086 Msa1369490:intron 30.0%
TTTATAGGGCTATTAGAGAA+AGG + tig0018829:8081-8100 Msa1369490:intron 30.0%
CTTAAAGGGAATTTGACTAT+AGG + tig0018829:8238-8257 Msa1369490:intron 30.0%
ATAGCTGAGATCTTAAACTT+CGG + tig0018829:8275-8294 Msa1369490:intron 30.0%
CAATGATTGAAAAAGAGACT+GGG - tig0018829:8429-8448 None:intergenic 30.0%
GAATTTCATGAAATTCTCCT+TGG - tig0018829:8544-8563 None:intergenic 30.0%
GTGAAGACCTATATTTAAAG+AGG - tig0018829:8594-8613 None:intergenic 30.0%
AGACATTTAATATGAGATGG+AGG - tig0018829:8682-8701 None:intergenic 30.0%
!!! GATATTTTAGTCAATGAAGC+TGG - tig0018829:8742-8761 None:intergenic 30.0%
GGACTGTGATAGAATAAATA+AGG + tig0018829:8784-8803 Msa1369490:intron 30.0%
AGGGTAGTATTAGTAGAAAT+AGG + tig0018829:8804-8823 Msa1369490:intron 30.0%
CTCATATTAAGTGTAATGCT+TGG - tig0018829:8887-8906 None:intergenic 30.0%
GCATTACACTTAATATGAGA+CGG + tig0018829:8888-8907 Msa1369490:intron 30.0%
!! AACCCAATTTTGAAGAATGT+AGG - tig0018829:9129-9148 None:intergenic 30.0%
TCTTCAAAATTGGGTTTGAA+AGG + tig0018829:9133-9152 Msa1369490:CDS 30.0%
GAAATTGATCTCGAAACAAT+TGG + tig0018829:9440-9459 Msa1369490:CDS 30.0%
! TTATCACTCTCTTCAACTTT+TGG - tig0018829:9599-9618 None:intergenic 30.0%
AGTTTGTCTTCTAACAAAGA+CGG + tig0018829:9623-9642 Msa1369490:CDS 30.0%
GTGCTTAATCTGTTAATTGT+AGG + tig0018829:9882-9901 Msa1369490:intron 30.0%
AATGCACAAAAATGAAAAGG+AGG + tig0018829:9981-10000 Msa1369490:CDS 30.0%
TTTATCCCAAACATGATTTC+TGG + tig0018829:10250-10269 Msa1369490:CDS 30.0%
GCACAACTTATTAGAAGTTT+CGG + tig0018829:10370-10389 Msa1369490:CDS 30.0%
! TGATTTTATAAGACATCAGC+TGG + tig0018829:10456-10475 Msa1369490:CDS 30.0%
! GATTTTATAAGACATCAGCT+GGG + tig0018829:10457-10476 Msa1369490:CDS 30.0%
TGCCATGGAAAATCAAAATT+TGG + tig0018829:10537-10556 Msa1369490:CDS 30.0%
!!! TTTTGAAATGAGCATCAGAA+GGG - tig0018829:10570-10589 None:intergenic 30.0%
!!! TTTTTGAAATGAGCATCAGA+AGG - tig0018829:10571-10590 None:intergenic 30.0%
GAAAAACTCAACAAATGTCT+TGG - tig0018829:10698-10717 None:intergenic 30.0%
CCTATAGGGTTAATTAAGTA+GGG - tig0018829:10805-10824 None:intergenic 30.0%
CCTACTTAATTAACCCTATA+GGG + tig0018829:10803-10822 Msa1369490:intron 30.0%
!!! CCTATAGGGTTTTATTTTGT+AGG - tig0018829:10878-10897 None:intergenic 30.0%
CCTACAAAATAAAACCCTAT+AGG + tig0018829:10875-10894 Msa1369490:intron 30.0%
! GTTTTATGCTTCAGAAATAG+AGG - tig0018829:11663-11682 None:intergenic 30.0%
CAGCTATGTAGAAAGTTTAA+CGG + tig0018829:11682-11701 Msa1369490:intron 30.0%
TAAGCTAAACGGATCAAATA+GGG - tig0018829:11738-11757 None:intergenic 30.0%
GTTTGACTGAATAAAACAGA+TGG - tig0018829:11993-12012 None:intergenic 30.0%
!!! TGTGACCCTAATTTTGATTT+GGG - tig0018829:12083-12102 None:intergenic 30.0%
!!! ATGTGACCCTAATTTTGATT+TGG - tig0018829:12084-12103 None:intergenic 30.0%
AAAACCAAGTTTCTTCTGAT+AGG + tig0018829:12498-12517 Msa1369490:intron 30.0%
AATTCCTATCAGAAGAAACT+TGG - tig0018829:12505-12524 None:intergenic 30.0%
AAAGGACAACTGAAAATACA+AGG + tig0018829:12898-12917 Msa1369490:intron 30.0%
AACATTTATGCTTCAGAACA+AGG - tig0018829:13034-13053 None:intergenic 30.0%
ATCAATTCCATGTTCAATCA+TGG + tig0018829:13077-13096 Msa1369490:intron 30.0%
TCAATTCCATGTTCAATCAT+GGG + tig0018829:13078-13097 Msa1369490:intron 30.0%
AATATTCTTGAAACTCTAGC+AGG - tig0018829:13609-13628 None:intergenic 30.0%
AAAACAAAGTGCAGTAATTG+AGG + tig0018829:13689-13708 Msa1369490:CDS 30.0%
! TTTTCTAGATGTAAAGCTCT+TGG + tig0018829:13849-13868 Msa1369490:CDS 30.0%
TGTTCTTCCTAAAGATCTAA+GGG - tig0018829:13883-13902 None:intergenic 30.0%
TTGTTCTTCCTAAAGATCTA+AGG - tig0018829:13884-13903 None:intergenic 30.0%
AACAACATACATGGTATACA+GGG - tig0018829:13983-14002 None:intergenic 30.0%
! TCTATTCTAGCTAAAGTAGA+TGG - tig0018829:14024-14043 None:intergenic 30.0%
ACTTTAGCTAGAATAGACAA+TGG + tig0018829:14027-14046 Msa1369490:three_prime_UTR 30.0%
AGTTAGAAGAAACTCGTAGT+AGG + tig0018829:6339-6358 Msa1369490:five_prime_UTR 35.0%
GTTAGAAGAAACTCGTAGTA+GGG + tig0018829:6340-6359 Msa1369490:five_prime_UTR 35.0%
TGAAAAGATGAGAAGAAGGT+GGG - tig0018829:6456-6475 None:intergenic 35.0%
TTGAAAAGATGAGAAGAAGG+TGG - tig0018829:6457-6476 None:intergenic 35.0%
! GGTAAAACCTAATTGGTCTA+TGG - tig0018829:6522-6541 None:intergenic 35.0%
AGTCTTGGGTAAAACCTAAT+TGG - tig0018829:6529-6548 None:intergenic 35.0%
TAAGCAGTTAACAGAGTCTT+GGG - tig0018829:6543-6562 None:intergenic 35.0%
ATAAGCAGTTAACAGAGTCT+TGG - tig0018829:6544-6563 None:intergenic 35.0%
CTTATACCAAACTCATTCGA+CGG + tig0018829:6559-6578 Msa1369490:five_prime_UTR 35.0%
ATGGTCTCTTTCTTTGTATC+AGG - tig0018829:6799-6818 None:intergenic 35.0%
!! ATGACTTGCTGTGATATTTG+TGG + tig0018829:6874-6893 Msa1369490:CDS 35.0%
TTTAGTACTAGGTCTAAGGA+GGG + tig0018829:6988-7007 Msa1369490:intron 35.0%
CAAGAACTTCAACTACAAAC+TGG - tig0018829:7151-7170 None:intergenic 35.0%
TTCCTCTACTTCCCATATTT+GGG - tig0018829:7216-7235 None:intergenic 35.0%
TGAGAAAAAGAGATCTGCAA+CGG - tig0018829:7351-7370 None:intergenic 35.0%
TACCAAATCACAAATGCCTT+CGG + tig0018829:7372-7391 Msa1369490:intron 35.0%
TTACAGTTCCCTGTAATTAG+AGG - tig0018829:7456-7475 None:intergenic 35.0%
AAAAAACAGGAGAAGGGTTT+GGG - tig0018829:7518-7537 None:intergenic 35.0%
TAAAAAACAGGAGAAGGGTT+TGG - tig0018829:7519-7538 None:intergenic 35.0%
! AATAAAGCTTTGTCTCGGAA+GGG - tig0018829:7596-7615 None:intergenic 35.0%
AGTAAAGATGCCTCATTGAT+TGG + tig0018829:7629-7648 Msa1369490:intron 35.0%
ATCAAACAAGCCAATCAATG+AGG - tig0018829:7642-7661 None:intergenic 35.0%
! TCCATGTCACATCTTTTAGA+AGG + tig0018829:7824-7843 Msa1369490:intron 35.0%
! ACCTTCTAAAAGATGTGACA+TGG - tig0018829:7828-7847 None:intergenic 35.0%
!!! TCTTTTAGAAGGTATTGCAG+TGG + tig0018829:7835-7854 Msa1369490:intron 35.0%
GATAATAGCACACTCAACTA+AGG - tig0018829:8003-8022 None:intergenic 35.0%
AAAACCTATGAGGTACAGTT+TGG - tig0018829:8116-8135 None:intergenic 35.0%
!!! TCCTGGTTTTGACAACTTAA+AGG + tig0018829:8223-8242 Msa1369490:intron 35.0%
!!! CCTGGTTTTGACAACTTAAA+GGG + tig0018829:8224-8243 Msa1369490:intron 35.0%
AACCTAGCACTATACAATGT+GGG - tig0018829:8313-8332 None:intergenic 35.0%
AAACCTAGCACTATACAATG+TGG - tig0018829:8314-8333 None:intergenic 35.0%
TAGTGCTAGGTTTACAACAA+TGG + tig0018829:8321-8340 Msa1369490:intron 35.0%
!! CATCAAAGAGATTTTTCAGC+GGG - tig0018829:8364-8383 None:intergenic 35.0%
!! GCATCAAAGAGATTTTTCAG+CGG - tig0018829:8365-8384 None:intergenic 35.0%
GAAGATACAAACAAAACTCC+TGG + tig0018829:8389-8408 Msa1369490:CDS 35.0%
GCAATGATTGAAAAAGAGAC+TGG - tig0018829:8430-8449 None:intergenic 35.0%
GGAAATATCACAACCTCTTT+GGG - tig0018829:8464-8483 None:intergenic 35.0%
TGGAAATATCACAACCTCTT+TGG - tig0018829:8465-8484 None:intergenic 35.0%
ATATTTCCAATGCAAGACGT+TGG + tig0018829:8476-8495 Msa1369490:CDS 35.0%
AGCCATCCCTCTTTAAATAT+AGG + tig0018829:8584-8603 Msa1369490:CDS 35.0%
GACCTATATTTAAAGAGGGA+TGG - tig0018829:8589-8608 None:intergenic 35.0%
!!! CAATGAAGCTGGTTTTATCA+TGG - tig0018829:8731-8750 None:intergenic 35.0%
TACACTTAATATGAGACGGA+AGG + tig0018829:8892-8911 Msa1369490:intron 35.0%
TGGCCTACATTCTTCAAAAT+TGG + tig0018829:9123-9142 Msa1369490:CDS 35.0%
GGCCTACATTCTTCAAAATT+GGG + tig0018829:9124-9143 Msa1369490:CDS 35.0%
CAATCAAGCAAAGAAAAGTC+CGG + tig0018829:9557-9576 Msa1369490:CDS 35.0%
!! TGGTAAGAAACTTGTTGATG+AGG - tig0018829:9734-9753 None:intergenic 35.0%
AACGTATCTTCAGATTGTTG+AGG - tig0018829:9776-9795 None:intergenic 35.0%
CCTGGGATATATGAAAGAAT+AGG - tig0018829:9833-9852 None:intergenic 35.0%
CCTATTCTTTCATATATCCC+AGG + tig0018829:9830-9849 Msa1369490:intron 35.0%
TATCCCAGGACTATATTTCA+AGG + tig0018829:9844-9863 Msa1369490:intron 35.0%
CTTCCTTGAAATATAGTCCT+GGG - tig0018829:9850-9869 None:intergenic 35.0%
TCTTCCTTGAAATATAGTCC+TGG - tig0018829:9851-9870 None:intergenic 35.0%
TCTGGAAAATCAACACTATC+TGG + tig0018829:9919-9938 Msa1369490:CDS 35.0%
GAAAATCAACACTATCTGGT+AGG + tig0018829:9923-9942 Msa1369490:CDS 35.0%
TGGTAGGTTATTACACCTAT+TGG + tig0018829:9939-9958 Msa1369490:CDS 35.0%
GGTAGGTTATTACACCTATT+GGG + tig0018829:9940-9959 Msa1369490:CDS 35.0%
! TTCCTCGTCTCTTTTAATCA+GGG + tig0018829:10085-10104 Msa1369490:intron 35.0%
TTGATGAAAGTTCCGAAGAA+AGG + tig0018829:10137-10156 Msa1369490:CDS 35.0%
TGATGAAAGTTCCGAAGAAA+GGG + tig0018829:10138-10157 Msa1369490:CDS 35.0%
GGGATAAAATCTTTATGACC+AGG - tig0018829:10238-10257 None:intergenic 35.0%
TAGCTCCAGAAATCATGTTT+GGG - tig0018829:10258-10277 None:intergenic 35.0%
TCAAAGATTCTTCTCTCTCA+TGG + tig0018829:10503-10522 Msa1369490:CDS 35.0%
! TTTGAAATGAGCATCAGAAG+GGG - tig0018829:10569-10588 None:intergenic 35.0%
CTGATGCTCATTTCAAAAAC+TGG + tig0018829:10572-10591 Msa1369490:CDS 35.0%
CCCTACTTAATTAACCCTAT+AGG + tig0018829:10802-10821 Msa1369490:intron 35.0%
CCCTATAGGGTTAATTAAGT+AGG - tig0018829:10816-10835 None:intergenic 35.0%
ATGATACAGATACGAGGATA+CGG - tig0018829:11108-11127 None:intergenic 35.0%
ACTCAAACTTAGCATGCTAA+TGG + tig0018829:11261-11280 Msa1369490:intron 35.0%
TTAGTGGAACCCAACTTAAA+TGG + tig0018829:11424-11443 Msa1369490:intron 35.0%
! CTTGGGAAACCATTTAAGTT+GGG - tig0018829:11436-11455 None:intergenic 35.0%
CAGCCAATTTAGAGATAAAC+CGG - tig0018829:11462-11481 None:intergenic 35.0%
CTAAGCTAAACGGATCAAAT+AGG - tig0018829:11739-11758 None:intergenic 35.0%
TTCCTTCTCACCTTGATTTA+TGG + tig0018829:11842-11861 Msa1369490:intron 35.0%
AACCATAAATCAAGGTGAGA+AGG - tig0018829:11847-11866 None:intergenic 35.0%
! TTCAGTTGGAGGGTATAAAT+TGG - tig0018829:11894-11913 None:intergenic 35.0%
!!! TTAGGTTTTAGGACCAAAGT+AGG - tig0018829:11917-11936 None:intergenic 35.0%
TACTGCATGTCAGAAAGATT+AGG - tig0018829:11961-11980 None:intergenic 35.0%
! TGGTTGTTTCATTGTGAAAC+AGG + tig0018829:12207-12226 Msa1369490:intron 35.0%
TCATTGTGAAACAGGTATAC+TGG + tig0018829:12215-12234 Msa1369490:intron 35.0%
TATACTGGACCTTATCTGTT+AGG + tig0018829:12230-12249 Msa1369490:CDS 35.0%
GTTATCAAATCAACTGCACA+AGG + tig0018829:12320-12339 Msa1369490:CDS 35.0%
! GTGGAACAAAGGTATAAAAC+TGG + tig0018829:12387-12406 Msa1369490:intron 35.0%
!! GATGACGGAAACAAATAAAC+AGG - tig0018829:12644-12663 None:intergenic 35.0%
TGAATGGAAAATCACGATGA+CGG - tig0018829:12659-12678 None:intergenic 35.0%
GGAAAAACATTTATGGACCT+GGG - tig0018829:13004-13023 None:intergenic 35.0%
TGGAAAAACATTTATGGACC+TGG - tig0018829:13005-13024 None:intergenic 35.0%
TGCTCAAGTTCTTCTTAACA+TGG + tig0018829:13185-13204 Msa1369490:intron 35.0%
! TGTTGATGGAAGTCATGTAT+TGG + tig0018829:13366-13385 Msa1369490:CDS 35.0%
TTGAAATTGCTTGTCTTGGA+TGG + tig0018829:13445-13464 Msa1369490:CDS 35.0%
! AGAGTATCCCTTAGATCTTT+AGG + tig0018829:13873-13892 Msa1369490:CDS 35.0%
TTAGGAAGAACAATAGCTGT+TGG + tig0018829:13891-13910 Msa1369490:CDS 35.0%
GAACAACATACATGGTATAC+AGG - tig0018829:13984-14003 None:intergenic 35.0%
GTTTACTGGAACAACATACA+TGG - tig0018829:13992-14011 None:intergenic 35.0%
GATGGAAAACAGATGTTTAC+TGG - tig0018829:14006-14025 None:intergenic 35.0%
TTAGCTAGAATAGACAATGG+CGG + tig0018829:14030-14049 Msa1369490:three_prime_UTR 35.0%
TAATTCTTGTTGAGCTTCTC+TGG + tig0018829:14058-14077 Msa1369490:three_prime_UTR 35.0%
GAATCGGGAAGCGAATATTA+GGG - tig0018829:6411-6430 None:intergenic 40.0%
TGAATCGGGAAGCGAATATT+AGG - tig0018829:6412-6431 None:intergenic 40.0%
GAAAAGATGAGAAGAAGGTG+GGG - tig0018829:6455-6474 None:intergenic 40.0%
! GATTTTCCGTCGAATGAGTT+TGG - tig0018829:6568-6587 None:intergenic 40.0%
ATGCCGCGTAAAGTAAACTA+TGG + tig0018829:6588-6607 Msa1369490:CDS 40.0%
TTACTACGACGATGACTATG+AGG + tig0018829:6617-6636 Msa1369490:CDS 40.0%
! TGGTTCCATTGATAACCAAG+GGG - tig0018829:6912-6931 None:intergenic 40.0%
! GTGGTTCCATTGATAACCAA+GGG - tig0018829:6913-6932 None:intergenic 40.0%
!! TGTTTTGTTGATGTTGGAGG+TGG - tig0018829:6932-6951 None:intergenic 40.0%
ACCTCCAACATCAACAAAAC+AGG + tig0018829:6931-6950 Msa1369490:CDS 40.0%
!! ACCTGTTTTGTTGATGTTGG+AGG - tig0018829:6935-6954 None:intergenic 40.0%
GTTTAGTACTAGGTCTAAGG+AGG + tig0018829:6987-7006 Msa1369490:intron 40.0%
TGAACTTCCTGTTGCTCTTA+TGG + tig0018829:7037-7056 Msa1369490:intron 40.0%
AGTTTCTCCATAAGAGCAAC+AGG - tig0018829:7047-7066 None:intergenic 40.0%
AACTTCAACTACAAACTGGC+AGG - tig0018829:7147-7166 None:intergenic 40.0%
TGTAGTTGAAGTTCTTGTCG+TGG + tig0018829:7154-7173 Msa1369490:intron 40.0%
GTTCCTCTACTTCCCATATT+TGG - tig0018829:7217-7236 None:intergenic 40.0%
! GTTTTCTCCAGCAAGAACAA+TGG + tig0018829:7315-7334 Msa1369490:intron 40.0%
! TCTAAAGCCATTGTTCTTGC+TGG - tig0018829:7325-7344 None:intergenic 40.0%
GTTTGTAAACCATTCACCGA+AGG - tig0018829:7391-7410 None:intergenic 40.0%
CAGGGAACTGTAAAAAGCAA+CGG + tig0018829:7463-7482 Msa1369490:intron 40.0%
ACTGTAAAAAGCAACGGAAG+AGG + tig0018829:7469-7488 Msa1369490:intron 40.0%
CTGTAAAAAGCAACGGAAGA+GGG + tig0018829:7470-7489 Msa1369490:intron 40.0%
! CAATAAAGCTTTGTCTCGGA+AGG - tig0018829:7597-7616 None:intergenic 40.0%
TGATATGGGAAGATGGGATT+TGG + tig0018829:7698-7717 Msa1369490:intron 40.0%
TGTCACTCAGATCCACTTAA+GGG - tig0018829:8055-8074 None:intergenic 40.0%
TTGTCACTCAGATCCACTTA+AGG - tig0018829:8056-8075 None:intergenic 40.0%
CTATGAGGTACAGTTTGGTT+TGG - tig0018829:8111-8130 None:intergenic 40.0%
CAAACCAAACTGTACCTCAT+AGG + tig0018829:8109-8128 Msa1369490:intron 40.0%
CTCTTGCAGAAAAACCTATG+AGG - tig0018829:8126-8145 None:intergenic 40.0%
!! CCCTTTAAGTTGTCAAAACC+AGG - tig0018829:8227-8246 None:intergenic 40.0%
ATCCCACATTGTATAGTGCT+AGG + tig0018829:8308-8327 Msa1369490:intron 40.0%
!!! GAGATTTTTCAGCGGGTTAT+AGG - tig0018829:8357-8376 None:intergenic 40.0%
CAAAAACCAACGTCTTGCAT+TGG - tig0018829:8485-8504 None:intergenic 40.0%
!!! CAATGCAAGACGTTGGTTTT+TGG + tig0018829:8483-8502 Msa1369490:CDS 40.0%
TACAAGCTTGAGAATGTCCA+AGG + tig0018829:8524-8543 Msa1369490:CDS 40.0%
! AAGGTTTGCTCTCATGTACA+AGG - tig0018829:9000-9019 None:intergenic 40.0%
GATGGAACGTCAAACTTGAA+AGG - tig0018829:9082-9101 None:intergenic 40.0%
AGTATGAACCACATCATCTG+GGG - tig0018829:9104-9123 None:intergenic 40.0%
CAGTATGAACCACATCATCT+GGG - tig0018829:9105-9124 None:intergenic 40.0%
GTTGTCTGCACTTTCAGTAT+TGG - tig0018829:9378-9397 None:intergenic 40.0%
CTTATCAGCATCTTTGCCAA+AGG + tig0018829:9478-9497 Msa1369490:CDS 40.0%
GCATAGTTTCCTTTGTCCTT+TGG - tig0018829:9497-9516 None:intergenic 40.0%
AACTGTGTGGTTAAAACTGC+TGG - tig0018829:9666-9685 None:intergenic 40.0%
!! GAACTTTGAGATCTTGCATC+AGG - tig0018829:9689-9708 None:intergenic 40.0%
TTTCTTACCAGCCAGAAAAG+TGG + tig0018829:9744-9763 Msa1369490:CDS 40.0%
!! TAGGTTGGTCATGTTGATTC+TGG + tig0018829:9901-9920 Msa1369490:intron 40.0%
TCTTGGAAATTCGTCCCAAT+AGG - tig0018829:9957-9976 None:intergenic 40.0%
CGGTGAAATTACCTGTAACT+TGG - tig0018829:10007-10026 None:intergenic 40.0%
AGTTACAGGTAATTTCACCG+TGG + tig0018829:10007-10026 Msa1369490:intron 40.0%
! CTTCCTCGTCTCTTTTAATC+AGG + tig0018829:10084-10103 Msa1369490:intron 40.0%
! GTCTCTTTTAATCAGGGCAA+AGG + tig0018829:10091-10110 Msa1369490:intron 40.0%
AAGGATCCTTTGCTTATGCT+TGG + tig0018829:10110-10129 Msa1369490:CDS 40.0%
AGGATCCTTTGCTTATGCTT+GGG + tig0018829:10111-10130 Msa1369490:CDS 40.0%
AAAGTTCCGAAGAAAGGGAA+AGG + tig0018829:10143-10162 Msa1369490:CDS 40.0%
AAGTTCCGAAGAAAGGGAAA+GGG + tig0018829:10144-10163 Msa1369490:CDS 40.0%
TATTCCCCTTTCCCTTTCTT+CGG - tig0018829:10152-10171 None:intergenic 40.0%
GTAGCTCCAGAAATCATGTT+TGG - tig0018829:10259-10278 None:intergenic 40.0%
! CTTGTTATAGATGCCTCACT+TGG + tig0018829:10298-10317 Msa1369490:CDS 40.0%
AATCTTTGAACCCACATGAG+CGG - tig0018829:10492-10511 None:intergenic 40.0%
! TGATTTTCCATGGCACTCAA+GGG - tig0018829:10532-10551 None:intergenic 40.0%
! TTGATTTTCCATGGCACTCA+AGG - tig0018829:10533-10552 None:intergenic 40.0%
GATGTGATCTTAACTTCCCT+TGG + tig0018829:10614-10633 Msa1369490:intron 40.0%
TGATCTTAACTTCCCTTGGT+GGG + tig0018829:10618-10637 Msa1369490:intron 40.0%
TATAGTCTAATGCCCACCAA+GGG - tig0018829:10633-10652 None:intergenic 40.0%
TTATAGTCTAATGCCCACCA+AGG - tig0018829:10634-10653 None:intergenic 40.0%
CCTTGGGAAACCATTTAAGT+TGG - tig0018829:11437-11456 None:intergenic 40.0%
CCAACTTAAATGGTTTCCCA+AGG + tig0018829:11434-11453 Msa1369490:intron 40.0%
! GAGCCGGTTTATCTCTAAAT+TGG + tig0018829:11456-11475 Msa1369490:intron 40.0%
TGTGTTAGTTCCAGAAAGAC+TGG + tig0018829:11514-11533 Msa1369490:intron 40.0%
!! GCACATAGCTATTTCTACCA+AGG - tig0018829:11593-11612 None:intergenic 40.0%
TTGTAAATCCCACCTCAGAA+AGG + tig0018829:11629-11648 Msa1369490:intron 40.0%
AAGTTTAACGGTCTCACAGA+AGG + tig0018829:11694-11713 Msa1369490:intron 40.0%
GATTTCAAAGCAGCAACAAC+AGG - tig0018829:11776-11795 None:intergenic 40.0%
AATTAGGGTCACATGCACTT+TGG + tig0018829:12090-12109 Msa1369490:intron 40.0%
TCAACTGCACCTAACAGATA+AGG - tig0018829:12242-12261 None:intergenic 40.0%
TTTGCGAATTCTCTAGTAGG+AGG - tig0018829:12275-12294 None:intergenic 40.0%
! GGTTTTGCGAATTCTCTAGT+AGG - tig0018829:12278-12297 None:intergenic 40.0%
TCACATATTGGCATTAGCAG+AGG - tig0018829:12299-12318 None:intergenic 40.0%
TGTGAGGGACTAACTTTAAC+GGG - tig0018829:12536-12555 None:intergenic 40.0%
GTGTGAGGGACTAACTTTAA+CGG - tig0018829:12537-12556 None:intergenic 40.0%
!! AATGAAAGCATTGGGTGTGA+GGG - tig0018829:12551-12570 None:intergenic 40.0%
ACTACCACATGAATAGCCAT+AGG + tig0018829:12736-12755 Msa1369490:intron 40.0%
CTACCACATGAATAGCCATA+GGG + tig0018829:12737-12756 Msa1369490:intron 40.0%
CATTTATGGACCTGGGAAAA+AGG - tig0018829:12997-13016 None:intergenic 40.0%
GTTATGCCTTCAGATGTTGT+TGG + tig0018829:13262-13281 Msa1369490:CDS 40.0%
ACTGTTCCAACAACATCTGA+AGG - tig0018829:13271-13290 None:intergenic 40.0%
AATGTAGCTGTAACGTTGCA+TGG + tig0018829:13343-13362 Msa1369490:CDS 40.0%
AAATGCTTTGCAACTGCAAC+AGG - tig0018829:13421-13440 None:intergenic 40.0%
! TGTTGCAGTTGCAAAGCATT+TGG + tig0018829:13420-13439 Msa1369490:CDS 40.0%
GGAGTTGAAATTGCTTGTCT+TGG + tig0018829:13441-13460 Msa1369490:CDS 40.0%
GGTACAAGTCCCATATTGAT+CGG + tig0018829:13466-13485 Msa1369490:CDS 40.0%
!! AGTCTAGACTTGTTGAACAG+AGG + tig0018829:14198-14217 Msa1369490:three_prime_UTR 40.0%
!!! CAGAGGAATGACTTGTTTTG+AGG + tig0018829:14215-14234 Msa1369490:three_prime_UTR 40.0%
GAAGAAACTCGTAGTAGGGA+TGG + tig0018829:6344-6363 Msa1369490:five_prime_UTR 45.0%
AGAAGAAGGTGGGGTTTGAT+TGG - tig0018829:6446-6465 None:intergenic 45.0%
AAAGAGACCATTAAGCCACC+TGG + tig0018829:6808-6827 Msa1369490:CDS 45.0%
ATAGAGCAACTCCAAACTCC+AGG - tig0018829:6829-6848 None:intergenic 45.0%
CATGCTCTCGTCATTGTCAT+AGG - tig0018829:6857-6876 None:intergenic 45.0%
! GGTGGTTCCATTGATAACCA+AGG - tig0018829:6914-6933 None:intergenic 45.0%
TCAACTACAAACTGGCAGGA+TGG - tig0018829:7143-7162 None:intergenic 45.0%
CGTGGTACATAACGTACTTG+TGG + tig0018829:7172-7191 Msa1369490:intron 45.0%
GAAGTAGAGGAACTTTGCAG+TGG + tig0018829:7224-7243 Msa1369490:intron 45.0%
CTTTGCAGTGGAGCAGAATT+CGG + tig0018829:7236-7255 Msa1369490:intron 45.0%
!! CACCGAAGGCATTTGTGATT+TGG - tig0018829:7377-7396 None:intergenic 45.0%
TCACAAATGCCTTCGGTGAA+TGG + tig0018829:7379-7398 Msa1369490:intron 45.0%
!! ATGGAAGCATTTGTCGCGAA+GGG - tig0018829:7886-7905 None:intergenic 45.0%
GATCCTGTATCCCAACTTCA+TGG + tig0018829:8025-8044 Msa1369490:intron 45.0%
! TAAGGGTGCACCATGAAGTT+GGG - tig0018829:8038-8057 None:intergenic 45.0%
! TTAAGGGTGCACCATGAAGT+TGG - tig0018829:8039-8058 None:intergenic 45.0%
! GGTTTTTCTGCAAGAGCAGA+AGG + tig0018829:8130-8149 Msa1369490:intron 45.0%
TTTCGTGATAGTCGTTGTCC+TGG + tig0018829:8206-8225 Msa1369490:intron 45.0%
AAAAAGAGACTGGGCCAACT+TGG - tig0018829:8420-8439 None:intergenic 45.0%
!!! GACGTTGGTTTTTGGACAGA+TGG + tig0018829:8491-8510 Msa1369490:CDS 45.0%
CCAGTATGAACCACATCATC+TGG - tig0018829:9106-9125 None:intergenic 45.0%
CCAGATGATGTGGTTCATAC+TGG + tig0018829:9103-9122 Msa1369490:CDS 45.0%
! AAGACAGATAGGTTGAGGGA+GGG - tig0018829:9162-9181 None:intergenic 45.0%
! CCTGAAGACAGATAGGTTGA+GGG - tig0018829:9166-9185 None:intergenic 45.0%
GTTACAGCCTGAAGACAGAT+AGG - tig0018829:9173-9192 None:intergenic 45.0%
GCATCTTTGCCAAAGGACAA+AGG + tig0018829:9485-9504 Msa1369490:CDS 45.0%
! TGGTAGTGCAGACAAACTAC+CGG - tig0018829:9579-9598 None:intergenic 45.0%
ATCTTGCATCAGGAACTGTG+TGG - tig0018829:9679-9698 None:intergenic 45.0%
!!! TGAGGAAGCATCCACTTTTC+TGG - tig0018829:9758-9777 None:intergenic 45.0%
TGAAAAGGAGGCCAAGTTAC+AGG + tig0018829:9993-10012 Msa1369490:CDS 45.0%
TGCCCTGATTAAAAGAGACG+AGG - tig0018829:10090-10109 None:intergenic 45.0%
AAGTGCCCAAGCATAAGCAA+AGG - tig0018829:10119-10138 None:intergenic 45.0%
AGTTCCGAAGAAAGGGAAAG+GGG + tig0018829:10145-10164 Msa1369490:CDS 45.0%
AAGGGGAATAACCATGACAG+TGG + tig0018829:10162-10181 Msa1369490:CDS 45.0%
AATAACCATGACAGTGGCTG+TGG + tig0018829:10168-10187 Msa1369490:CDS 45.0%
AGCTTCAAATGCACCAAGTG+AGG - tig0018829:10314-10333 None:intergenic 45.0%
!! TCACTTGGTGCATTTGAAGC+TGG + tig0018829:10313-10332 Msa1369490:CDS 45.0%
! TGGTGCATTTGAAGCTGGTA+TGG + tig0018829:10318-10337 Msa1369490:CDS 45.0%
! GCATTTGAAGCTGGTATGGA+TGG + tig0018829:10322-10341 Msa1369490:CDS 45.0%
! TTTGAAGCTGGTATGGATGG+CGG + tig0018829:10325-10344 Msa1369490:CDS 45.0%
GAATGTTTCTCCGCTCATGT+GGG + tig0018829:10479-10498 Msa1369490:CDS 45.0%
GTGATCTTAACTTCCCTTGG+TGG + tig0018829:10617-10636 Msa1369490:intron 45.0%
CGGATACATAGTACGGCTAT+GGG - tig0018829:11137-11156 None:intergenic 45.0%
CCATAGCCGTACTATGTATC+CGG + tig0018829:11135-11154 Msa1369490:intron 45.0%
CATAGCCGTACTATGTATCC+GGG + tig0018829:11136-11155 Msa1369490:intron 45.0%
TGAAGCCCGGATACATAGTA+CGG - tig0018829:11144-11163 None:intergenic 45.0%
ATGTATCCGGGCTTCATAGA+TGG + tig0018829:11148-11167 Msa1369490:intron 45.0%
ATGTCACCATCTATGAAGCC+CGG - tig0018829:11157-11176 None:intergenic 45.0%
TAAATGGTTTCCCAAGGAGC+CGG + tig0018829:11440-11459 Msa1369490:intron 45.0%
! TAGAGATAAACCGGCTCCTT+GGG - tig0018829:11453-11472 None:intergenic 45.0%
! TTAGAGATAAACCGGCTCCT+TGG - tig0018829:11454-11473 None:intergenic 45.0%
! ATGGCTGCATATGCTACTTG+TGG - tig0018829:11485-11504 None:intergenic 45.0%
ATGTGTGAAGCCAGTCTTTC+TGG - tig0018829:11527-11546 None:intergenic 45.0%
!! AAGTTCAGCCTTTCTGAGGT+GGG - tig0018829:11640-11659 None:intergenic 45.0%
CACTAGGCGACTAAGCTAAA+CGG - tig0018829:11749-11768 None:intergenic 45.0%
CCAAAGTAGGTTCAGTTGGA+GGG - tig0018829:11904-11923 None:intergenic 45.0%
ACCAAAGTAGGTTCAGTTGG+AGG - tig0018829:11905-11924 None:intergenic 45.0%
AGGACCAAAGTAGGTTCAGT+TGG - tig0018829:11908-11927 None:intergenic 45.0%
CGCGCTGCACATATTAAGTT+AGG - tig0018829:11935-11954 None:intergenic 45.0%
CAAATCAACTGCACAAGGAC+AGG + tig0018829:12325-12344 Msa1369490:CDS 45.0%
AGCTCTTCGAAGTGGAACAA+AGG + tig0018829:12376-12395 Msa1369490:CDS 45.0%
!! CAATGAAAGCATTGGGTGTG+AGG - tig0018829:12552-12571 None:intergenic 45.0%
AGTCCCTATGGCTATTCATG+TGG - tig0018829:12743-12762 None:intergenic 45.0%
CAAGGACAGCAAGTTTCATC+AGG + tig0018829:12916-12935 Msa1369490:intron 45.0%
GCTTCAGAACAAGGAATAGC+TGG - tig0018829:13025-13044 None:intergenic 45.0%
CATAGGCCCATGATTGAACA+TGG - tig0018829:13087-13106 None:intergenic 45.0%
CATGTTCAATCATGGGCCTA+TGG + tig0018829:13085-13104 Msa1369490:intron 45.0%
TGTTGGAACAGTGCGTACAT+TGG + tig0018829:13279-13298 Msa1369490:CDS 45.0%
! GTAACGTTGCATGGTGTTGA+TGG + tig0018829:13352-13371 Msa1369490:CDS 45.0%
! GATGGAAGTCATGTATTGGC+TGG + tig0018829:13370-13389 Msa1369490:CDS 45.0%
TCAGTACTTGATCCCAAGAC+TGG + tig0018829:13630-13649 Msa1369490:CDS 45.0%
ACTTGATCCCAAGACTGGTA+AGG + tig0018829:13635-13654 Msa1369490:CDS 45.0%
TTGGTCACCTTACCAGTCTT+GGG - tig0018829:13645-13664 None:intergenic 45.0%
TTTGGTCACCTTACCAGTCT+TGG - tig0018829:13646-13665 None:intergenic 45.0%
! GAGACAACGAGGGTTCTTTT+TGG - tig0018829:13664-13683 None:intergenic 45.0%
!! GTTTTGACGTGAGACAACGA+GGG - tig0018829:13674-13693 None:intergenic 45.0%
!!! TGTTTTGACGTGAGACAACG+AGG - tig0018829:13675-13694 None:intergenic 45.0%
GAAAACTCTACCACACAGAC+TGG - tig0018829:13834-13853 None:intergenic 45.0%
TATGCCGACAGTGATGACAT+TGG + tig0018829:13950-13969 Msa1369490:three_prime_UTR 45.0%
CTCTCCAATGTCATCACTGT+CGG - tig0018829:13957-13976 None:intergenic 45.0%
!!! TTTTAAAATAAAAATTTGAA+TGG - tig0018829:12675-12694 None:intergenic 5.0%
!! AAATATTTAACAAAATAATT+TGG + tig0018829:12800-12819 Msa1369490:intron 5.0%
CGGGAAGCGAATATTAGGGT+TGG - tig0018829:6407-6426 None:intergenic 50.0%
CCAAACTCCAGGTGGCTTAA+TGG - tig0018829:6818-6837 None:intergenic 50.0%
CCATTAAGCCACCTGGAGTT+TGG + tig0018829:6815-6834 Msa1369490:CDS 50.0%
CGTCACCCCTTGGTTATCAA+TGG + tig0018829:6904-6923 Msa1369490:CDS 50.0%
GTCCGAGTTCTATGTCCATG+TGG + tig0018829:7067-7086 Msa1369490:intron 50.0%
GGCCACATGGACATAGAACT+CGG - tig0018829:7072-7091 None:intergenic 50.0%
GAGTTCTATGTCCATGTGGC+CGG + tig0018829:7071-7090 Msa1369490:intron 50.0%
AGTTCTATGTCCATGTGGCC+GGG + tig0018829:7072-7091 Msa1369490:intron 50.0%
CGTACTTGTGGAGTTTCTCG+AGG + tig0018829:7184-7203 Msa1369490:intron 50.0%
ACTTGTGGAGTTTCTCGAGG+TGG + tig0018829:7187-7206 Msa1369490:intron 50.0%
CTTGTGGAGTTTCTCGAGGT+GGG + tig0018829:7188-7207 Msa1369490:intron 50.0%
TTGTGGAGTTTCTCGAGGTG+GGG + tig0018829:7189-7208 Msa1369490:intron 50.0%
GGCCCAAATATGGGAAGTAG+AGG + tig0018829:7211-7230 Msa1369490:intron 50.0%
! AGCAGGCTCTCCACTAGTTT+GGG - tig0018829:7548-7567 None:intergenic 50.0%
AAGCAGGCTCTCCACTAGTT+TGG - tig0018829:7549-7568 None:intergenic 50.0%
GGCAGAGGGTTATGATAAGC+AGG - tig0018829:7565-7584 None:intergenic 50.0%
! TGTCTCGGAAGGGTTTTCGA+GGG - tig0018829:7586-7605 None:intergenic 50.0%
! TTGTCTCGGAAGGGTTTTCG+AGG - tig0018829:7587-7606 None:intergenic 50.0%
!! GATGGAAGCATTTGTCGCGA+AGG - tig0018829:7887-7906 None:intergenic 50.0%
ATGACTCTACAGCTCAGTGC+TGG + tig0018829:7960-7979 Msa1369490:intron 50.0%
GCACCATGAAGTTGGGATAC+AGG - tig0018829:8031-8050 None:intergenic 50.0%
CTTCATGGTGCACCCTTAAG+TGG + tig0018829:8040-8059 Msa1369490:intron 50.0%
! AACTCCTGGAGCATCCAAGT+TGG + tig0018829:8403-8422 Msa1369490:CDS 50.0%
!! ACCTCTTTGGGACTCTGTTG+TGG - tig0018829:8452-8471 None:intergenic 50.0%
TGAACCACATCATCTGGGGA+TGG - tig0018829:9100-9119 None:intergenic 50.0%
! GAAGACAGATAGGTTGAGGG+AGG - tig0018829:9163-9182 None:intergenic 50.0%
CCCTCAACCTATCTGTCTTC+AGG + tig0018829:9163-9182 Msa1369490:CDS 50.0%
GCCTGAAGACAGATAGGTTG+AGG - tig0018829:9167-9186 None:intergenic 50.0%
!! GAAGCATCCACTTTTCTGGC+TGG - tig0018829:9754-9773 None:intergenic 50.0%
ATATGCCACAGCCACTGTCA+TGG - tig0018829:10176-10195 None:intergenic 50.0%
GTTGTTGTGCTTGACTCTCC+TGG + tig0018829:10217-10236 Msa1369490:CDS 50.0%
GGAATGTTTCTCCGCTCATG+TGG + tig0018829:10478-10497 Msa1369490:CDS 50.0%
ATGGATTCCCTTGAGTGCCA+TGG + tig0018829:10522-10541 Msa1369490:CDS 50.0%
CCGGATACATAGTACGGCTA+TGG - tig0018829:11138-11157 None:intergenic 50.0%
! GAAGTTCAGCCTTTCTGAGG+TGG - tig0018829:11641-11660 None:intergenic 50.0%
GAGGAAGTTCAGCCTTTCTG+AGG - tig0018829:11644-11663 None:intergenic 50.0%
AGCAACAACAGGCAAGCACT+AGG - tig0018829:11765-11784 None:intergenic 50.0%
CCCTCCAACTGAACCTACTT+TGG + tig0018829:11901-11920 Msa1369490:intron 50.0%
AAGGACAGGTGTCTGCTTGT+GGG + tig0018829:12339-12358 Msa1369490:CDS 50.0%
! CGCAAATGTGCCTTTTTCCC+AGG + tig0018829:12984-13003 Msa1369490:intron 50.0%
TGATCCAAGAGGTAGGCCAT+AGG - tig0018829:13104-13123 None:intergenic 50.0%
TATGGCCTACCTCTTGGATC+AGG + tig0018829:13103-13122 Msa1369490:intron 50.0%
TGATGGGATCCTGATCCAAG+AGG - tig0018829:13115-13134 None:intergenic 50.0%
!! GGAAGTCATGTATTGGCTGG+AGG + tig0018829:13373-13392 Msa1369490:CDS 50.0%
CTGCAACAGGAAAGTCAGGA+TGG - tig0018829:13408-13427 None:intergenic 50.0%
GCAACTGCAACAGGAAAGTC+AGG - tig0018829:13412-13431 None:intergenic 50.0%
!! ACCTGAGCGCCGATCAATAT+GGG - tig0018829:13478-13497 None:intergenic 50.0%
CAGTGCAACTCACTCAAAGC+TGG + tig0018829:13770-13789 Msa1369490:intron 50.0%
CGACAGTGATGACATTGGAG+AGG + tig0018829:13955-13974 Msa1369490:three_prime_UTR 50.0%
GAGCAACTCCAAACTCCAGG+TGG - tig0018829:6826-6845 None:intergenic 55.0%
GTTCTATGTCCATGTGGCCG+GGG + tig0018829:7073-7092 Msa1369490:intron 55.0%
GAACATTCCACCATGCACCC+CGG - tig0018829:7093-7112 None:intergenic 55.0%
TGTGGAGTTTCTCGAGGTGG+GGG + tig0018829:7190-7209 Msa1369490:intron 55.0%
GCAGTGGAGCAGAATTCGGT+AGG + tig0018829:7240-7259 Msa1369490:intron 55.0%
!! GAAGGGTTTTCGAGGGCAGA+GGG - tig0018829:7579-7598 None:intergenic 55.0%
GCCACAACAGAGTCCCAAAG+AGG + tig0018829:8448-8467 Msa1369490:CDS 55.0%
CGTTCCATCCCCAGATGATG+TGG + tig0018829:9093-9112 Msa1369490:CDS 55.0%
CAAGGACAGGTGTCTGCTTG+TGG + tig0018829:12338-12357 Msa1369490:CDS 55.0%
GGTGTCTGCTTGTGGGAAAC+TGG + tig0018829:12346-12365 Msa1369490:CDS 55.0%
GCTTGTGGGAAACTGGAAGC+AGG + tig0018829:12353-12372 Msa1369490:CDS 55.0%
GAAGCAGGAGCTCTTCGAAG+TGG + tig0018829:12368-12387 Msa1369490:CDS 55.0%
GGGATCCTGATCCAAGAGGT+AGG - tig0018829:13111-13130 None:intergenic 55.0%
TCCAGCTCTTGCAACAGAGC+AGG - tig0018829:13320-13339 None:intergenic 55.0%
TCCCATATTGATCGGCGCTC+AGG + tig0018829:13474-13493 Msa1369490:CDS 55.0%
!! CACCTGAGCGCCGATCAATA+TGG - tig0018829:13479-13498 None:intergenic 55.0%
TTTGCACGAGCCAGTCTGTG+TGG + tig0018829:13821-13840 Msa1369490:CDS 55.0%
TGGCGTTCTACGTCACCCCT+TGG + tig0018829:6894-6913 Msa1369490:CDS 60.0%
TCGAGGTGGGGGCCCAAATA+TGG + tig0018829:7201-7220 Msa1369490:intron 60.0%
CGAGGTGGGGGCCCAAATAT+GGG + tig0018829:7202-7221 Msa1369490:intron 60.0%
GGCGCATGTAGAGTGATCGC+TGG + tig0018829:7261-7280 Msa1369490:intron 60.0%
!! GGAAGGGTTTTCGAGGGCAG+AGG - tig0018829:7580-7599 None:intergenic 60.0%
TGGGCCAACTTGGATGCTCC+AGG - tig0018829:8410-8429 None:intergenic 60.0%
! GCTGGTATGGATGGCGGCAA+AGG + tig0018829:10331-10350 Msa1369490:CDS 60.0%
TGGGCCTATGGCCTACCTCT+TGG + tig0018829:13097-13116 Msa1369490:intron 60.0%
GCCTGCTCTGTTGCAAGAGC+TGG + tig0018829:13316-13335 Msa1369490:CDS 60.0%
GTCCATGTGGCCGGGGTGCA+TGG + tig0018829:7080-7099 Msa1369490:intron 70.0%
CACCATGCACCCCGGCCACA+TGG - tig0018829:7085-7104 None:intergenic 70.0%
CATGTGGCCGGGGTGCATGG+TGG + tig0018829:7083-7102 Msa1369490:intron 70.0%
Chromosome Type Strat End Strand Name
tig0018829 gene 6290 14263 6290 ID=Msa1369490;Name=Msa1369490
tig0018829 mRNA 6290 14263 6290 ID=Msa1369490-mRNA-1;Parent=Msa1369490;Name=Msa1369490-mRNA-1;_AED=0.08;_eAED=0.08;_QI=298|0.9|0.90|1|1|1|11|316|791
tig0018829 exon 6290 6681 6290 ID=Msa1369490-mRNA-1:exon:1130;Parent=Msa1369490-mRNA-1
tig0018829 exon 6785 6952 6785 ID=Msa1369490-mRNA-1:exon:1131;Parent=Msa1369490-mRNA-1
tig0018829 exon 8387 8605 8387 ID=Msa1369490-mRNA-1:exon:1132;Parent=Msa1369490-mRNA-1
tig0018829 exon 9077 9187 9077 ID=Msa1369490-mRNA-1:exon:1133;Parent=Msa1369490-mRNA-1
tig0018829 exon 9309 9817 9309 ID=Msa1369490-mRNA-1:exon:1134;Parent=Msa1369490-mRNA-1
tig0018829 exon 9904 10014 9904 ID=Msa1369490-mRNA-1:exon:1135;Parent=Msa1369490-mRNA-1
tig0018829 exon 10106 10593 10106 ID=Msa1369490-mRNA-1:exon:1136;Parent=Msa1369490-mRNA-1
tig0018829 exon 12229 12397 12229 ID=Msa1369490-mRNA-1:exon:1137;Parent=Msa1369490-mRNA-1
tig0018829 exon 13256 13495 13256 ID=Msa1369490-mRNA-1:exon:1138;Parent=Msa1369490-mRNA-1
tig0018829 exon 13576 13710 13576 ID=Msa1369490-mRNA-1:exon:1139;Parent=Msa1369490-mRNA-1
tig0018829 exon 13816 14263 13816 ID=Msa1369490-mRNA-1:exon:1140;Parent=Msa1369490-mRNA-1
tig0018829 five_prime_UTR 6290 6587 6290 ID=Msa1369490-mRNA-1:five_prime_utr;Parent=Msa1369490-mRNA-1
tig0018829 CDS 6588 6681 6588 ID=Msa1369490-mRNA-1:cds;Parent=Msa1369490-mRNA-1
tig0018829 CDS 6785 6952 6785 ID=Msa1369490-mRNA-1:cds;Parent=Msa1369490-mRNA-1
tig0018829 CDS 8387 8605 8387 ID=Msa1369490-mRNA-1:cds;Parent=Msa1369490-mRNA-1
tig0018829 CDS 9077 9187 9077 ID=Msa1369490-mRNA-1:cds;Parent=Msa1369490-mRNA-1
tig0018829 CDS 9309 9817 9309 ID=Msa1369490-mRNA-1:cds;Parent=Msa1369490-mRNA-1
tig0018829 CDS 9904 10014 9904 ID=Msa1369490-mRNA-1:cds;Parent=Msa1369490-mRNA-1
tig0018829 CDS 10106 10593 10106 ID=Msa1369490-mRNA-1:cds;Parent=Msa1369490-mRNA-1
tig0018829 CDS 12229 12397 12229 ID=Msa1369490-mRNA-1:cds;Parent=Msa1369490-mRNA-1
tig0018829 CDS 13256 13495 13256 ID=Msa1369490-mRNA-1:cds;Parent=Msa1369490-mRNA-1
tig0018829 CDS 13576 13710 13576 ID=Msa1369490-mRNA-1:cds;Parent=Msa1369490-mRNA-1
tig0018829 CDS 13816 13947 13816 ID=Msa1369490-mRNA-1:cds;Parent=Msa1369490-mRNA-1
tig0018829 three_prime_UTR 13948 14263 13948 ID=Msa1369490-mRNA-1:three_prime_utr;Parent=Msa1369490-mRNA-1
Gene Sequence

>Msa1369490

ATGCCGCGTAAAGTAAACTATGGAATCGATTACTACGACGATGACTATGAGGATTATGATGACTATGATTATGAAGTTGAATCTGAAAATTATGGAGTAGAACAACCTGATACAAAGAAAGAGACCATTAAGCCACCTGGAGTTTGGAGTTGCTCTATTTGCACCTATGACAATGACGAGAGCATGACTTGCTGTGATATTTGTGGCGTTCTACGTCACCCCTTGGTTATCAATGGAACCACCTCCAACATCAACAAAACAGTTGAAGATACAAACAAAACTCCTGGAGCATCCAAGTTGGCCCAGTCTCTTTTTCAATCATTGCCACAACAGAGTCCCAAAGAGGTTGTGATATTTCCAATGCAAGACGTTGGTTTTTGGACAGATGGCAGTAACATCTACAAGCTTGAGAATGTCCAAGGAGAATTTCATGAAATTCATAAGGCTTTTAATGCTCAAAGCCATCCCTCTTTAAATATAGATCCTTTCAAGTTTGACGTTCCATCCCCAGATGATGTGGTTCATACTGGCCTACATTCTTCAAAATTGGGTTTGAAAGGTAGCCCTCCCTCAACCTATCTGTCTTCAGGCTACAAAGTTAAAAACTCTAAAGATTCTCGGCTTTCATCAAGCAGCAGAGAGAAGAATGAACTAGAATCCAATACTGAAAGTGCAGACAACTTATCGTCTTTAATGCAAAAGAACAAGCTTTCCAAAAATGTAGAAATTGATCTCGAAACAATTGGTAAAACTTCAAACAGCTTATCAGCATCTTTGCCAAAGGACAAAGGAAACTATGCGAATAAAATAAATTCTTCAAAAATTGGTACAAATGGCATTCAATCAAGCAAAGAAAAGTCCGGTAGTTTGTCTGCACTACCAAAAGTTGAAGAGAGTGATAAACTTAGTTTGTCTTCTAACAAAGACGGAAAGTCTGAAAGTGCTTCCAGCAGTTTTAACCACACAGTTCCTGATGCAAGATCTCAAAGTTCTGATAATACTAATGCTAAGGGACCTCATCAACAAGTTTCTTACCAGCCAGAAAAGTGGATGCTTCCTCAACAATCTGAAGATACGTTGACTCAGTTGAATCTTGCAATTGTTGGTCATGTTGATTCTGGAAAATCAACACTATCTGGTAGGTTATTACACCTATTGGGACGAATTTCCAAGAAAGAAATGCACAAAAATGAAAAGGAGGCCAAGTTACAGGGCAAAGGATCCTTTGCTTATGCTTGGGCACTTGATGAAAGTTCCGAAGAAAGGGAAAGGGGAATAACCATGACAGTGGCTGTGGCATATTTTGACACTAAGAAATATCACGTTGTTGTGCTTGACTCTCCTGGTCATAAAGATTTTATCCCAAACATGATTTCTGGAGCTACACAAGCTGATGCTGCAGTTCTTGTTATAGATGCCTCACTTGGTGCATTTGAAGCTGGTATGGATGGCGGCAAAGGACAAACAAGAGAGCATGCACAACTTATTAGAAGTTTCGGTGTAGACCATGTTATAGTTGCAGTAAATAAGATGGATGCTGTGTCATACTCCAAAGACCGATTTGATTTTATAAGACATCAGCTGGGAATGTTTCTCCGCTCATGTGGGTTCAAAGATTCTTCTCTCTCATGGATTCCCTTGAGTGCCATGGAAAATCAAAATTTGGTAGCATCCCCTTCTGATGCTCATTTCAAAAACTGGTATACTGGACCTTATCTGTTAGGTGCAGTTGACTCACTACAACCTCCTACTAGAGAATTCGCAAAACCTCTGCTAATGCCAATATGTGATGTTATCAAATCAACTGCACAAGGACAGGTGTCTGCTTGTGGGAAACTGGAAGCAGGAGCTCTTCGAAGTGGAACAAAGGTGCTAGTTATGCCTTCAGATGTTGTTGGAACAGTGCGTACATTGGAGCGTGACTCTAACGCCTGCTCTGTTGCAAGAGCTGGAGATAATGTAGCTGTAACGTTGCATGGTGTTGATGGAAGTCATGTATTGGCTGGAGGCGTATTATGCCATCCTGACTTTCCTGTTGCAGTTGCAAAGCATTTGGAGTTGAAATTGCTTGTCTTGGATGGTACAAGTCCCATATTGATCGGCGCTCAGTTAGAGTTTCACATACATCATGCAAAAGAGCCTGCTAGAGTTTCAAGAATATTGTCAGTACTTGATCCCAAGACTGGTAAGGTGACCAAAAAGAACCCTCGTTGTCTCACGTCAAAACAAAGTGCAGTAATTGAGGTGATTTTGCACGAGCCAGTCTGTGTGGTAGAGTTTTCTAGATGTAAAGCTCTTGGAAGAGTATCCCTTAGATCTTTAGGAAGAACAATAGCTGTTGGACTTGTGTCAAGAATAATCGAAGAACAAGATTAG
Protein sequence

>Msa1369490

MPRKVNYGIDYYDDDYEDYDDYDYEVESENYGVEQPDTKKETIKPPGVWSCSICTYDNDESMTCCDICGVLRHPLVINGTTSNINKTVEDTNKTPGASKLAQSLFQSLPQQSPKEVVIFPMQDVGFWTDGSNIYKLENVQGEFHEIHKAFNAQSHPSLNIDPFKFDVPSPDDVVHTGLHSSKLGLKGSPPSTYLSSGYKVKNSKDSRLSSSSREKNELESNTESADNLSSLMQKNKLSKNVEIDLETIGKTSNSLSASLPKDKGNYANKINSSKIGTNGIQSSKEKSGSLSALPKVEESDKLSLSSNKDGKSESASSSFNHTVPDARSQSSDNTNAKGPHQQVSYQPEKWMLPQQSEDTLTQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKEMHKNEKEAKLQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFIPNMISGATQADAAVLVIDASLGAFEAGMDGGKGQTREHAQLIRSFGVDHVIVAVNKMDAVSYSKDRFDFIRHQLGMFLRSCGFKDSSLSWIPLSAMENQNLVASPSDAHFKNWYTGPYLLGAVDSLQPPTREFAKPLLMPICDVIKSTAQGQVSACGKLEAGALRSGTKVLVMPSDVVGTVRTLERDSNACSVARAGDNVAVTLHGVDGSHVLAGGVLCHPDFPVAVAKHLELKLLVLDGTSPILIGAQLEFHIHHAKEPARVSRILSVLDPKTGKVTKKNPRCLTSKQSAVIEVILHEPVCVVEFSRCKALGRVSLRSLGRTIAVGLVSRIIEEQD*