Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706170 | XP_024629615.1 | 89.407 | 472 | 36 | 2 | 1 | 459 | 1 | 471 | 0.0 | 832 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706170 | sp|Q5RF77|CHFR_PONAB | 23.760 | 383 | 196 | 10 | 143 | 455 | 212 | 568 | 2.22e-22 | 103 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706170 | G7LGH3 | 89.407 | 472 | 36 | 2 | 1 | 459 | 1 | 471 | 0.0 | 832 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0660110 | Msa0706170 | 0.940794 | 1.266644e-100 | -8.615850e-47 |
| Msa0706170 | Msa0765910 | 0.808828 | 2.556599e-50 | -8.615850e-47 |
| Msa0706170 | Msa0847770 | 0.806212 | 9.177849e-50 | -8.615850e-47 |
| Msa0706170 | Msa1102220 | 0.800481 | 1.412685e-48 | -8.615850e-47 |
| Msa0569950 | Msa0706170 | 0.877160 | 7.850447e-69 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706170 | MtrunA17_Chr8g0385331 | 89.407 | 472 | 36 | 2 | 1 | 459 | 1 | 471 | 0.0 | 832 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706170 | AT1G47570.1 | 52.043 | 465 | 207 | 3 | 8 | 458 | 2 | 464 | 3.57e-174 | 497 |
| Msa0706170 | AT1G47570.2 | 52.489 | 442 | 195 | 2 | 30 | 458 | 12 | 451 | 2.14e-167 | 479 |
| Msa0706170 | AT1G47570.3 | 53.525 | 383 | 175 | 2 | 8 | 389 | 2 | 382 | 2.64e-149 | 431 |
Find 130 sgRNAs with CRISPR-Local
Find 392 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCATCGTGTGAGCGTCTT+AGG | 0.130209 | 4_4:+79122607 | None:intergenic |
| AGCAGCGTCTGGCAGGTTTC+TGG | 0.141685 | 4_4:+79123439 | None:intergenic |
| CTCCATGCCTTCATAACTTT+TGG | 0.201636 | 4_4:-79123248 | Msa0706170:intron |
| ATATATTTATATGCATTTAT+TGG | 0.222657 | 4_4:+79125665 | None:intergenic |
| TGGAGTGCTCTTGGGGTAAC+TGG | 0.258057 | 4_4:-79121178 | Msa0706170:CDS |
| CATACCGGTCTTAAAGTATC+TGG | 0.266696 | 4_4:+79121130 | None:intergenic |
| TCTTCTCTTGTCGATGCTTC+TGG | 0.272913 | 4_4:+79119248 | None:intergenic |
| CCAGATTTCATCTGAGGGTT+TGG | 0.287343 | 4_4:+79125524 | None:intergenic |
| CCAAACCCTCAGATGAAATC+TGG | 0.331263 | 4_4:-79125524 | Msa0706170:CDS |
| CACTGTTAGGTCATTGGATC+TGG | 0.336068 | 4_4:-79122158 | Msa0706170:intron |
| GTAGTATTTGCTTAAACATA+TGG | 0.342439 | 4_4:-79123290 | Msa0706170:CDS |
| GTGAAGAGCATGCTCGTAAA+AGG | 0.342573 | 4_4:-79119187 | Msa0706170:CDS |
| TTCAATATAGTTACTGTTGT+TGG | 0.349217 | 4_4:-79121519 | Msa0706170:intron |
| TAACCTTCTTTAGCAGGGCC+TGG | 0.350910 | 4_4:+79123971 | None:intergenic |
| TTTCTGGGCTAGACACGATT+TGG | 0.360180 | 4_4:+79123455 | None:intergenic |
| GCAGCGTCTGGCAGGTTTCT+GGG | 0.369238 | 4_4:+79123440 | None:intergenic |
| GAGCATACTGGAGTGCTCTT+GGG | 0.380679 | 4_4:-79121186 | Msa0706170:CDS |
| TCTTCTGTCTCTGCGGTTGA+AGG | 0.382095 | 4_4:+79125625 | None:intergenic |
| CTCCAGTATGCTCCGCAAAA+AGG | 0.382235 | 4_4:+79121196 | None:intergenic |
| AGAGCAGTTGTTCAATTTGT+TGG | 0.383922 | 4_4:-79123063 | Msa0706170:CDS |
| ATATCTGAACACACTATATC+AGG | 0.394316 | 4_4:-79120719 | Msa0706170:CDS |
| GGAGCATACTGGAGTGCTCT+TGG | 0.398858 | 4_4:-79121187 | Msa0706170:CDS |
| GAGCAGTTGTTCAATTTGTT+GGG | 0.404013 | 4_4:-79123062 | Msa0706170:CDS |
| TGAGGCTGAGGCTGAGGCTG+AGG | 0.408450 | 4_4:+79125554 | None:intergenic |
| GAAAGTTGCATAAGACAAAT+GGG | 0.410739 | 4_4:-79120556 | Msa0706170:CDS |
| TTTGGCTGAGGCTGAGGCTG+AGG | 0.410909 | 4_4:+79125542 | None:intergenic |
| TGAGGCTGAGGCTGAGGCTG+AGG | 0.411595 | 4_4:+79125548 | None:intergenic |
| TGAAAGTTGCATAAGACAAA+TGG | 0.411660 | 4_4:-79120557 | Msa0706170:CDS |
| TCTGACCTTATCTCAACATC+AGG | 0.419515 | 4_4:+79124639 | None:intergenic |
| AGGTTCTAACCTTCTTTAGC+AGG | 0.420908 | 4_4:+79123965 | None:intergenic |
| GTTTGCTTGGCATCGTTGCC+TGG | 0.423864 | 4_4:-79119022 | Msa0706170:three_prime_UTR |
| TTCATCTGAGGGTTTGGCTG+AGG | 0.428073 | 4_4:+79125530 | None:intergenic |
| AAAGTATCTGGGGAACAAAC+AGG | 0.434161 | 4_4:+79121142 | None:intergenic |
| AAGCTGAATAACAGAGAAAT+CGG | 0.437286 | 4_4:-79120496 | Msa0706170:CDS |
| ACAAATGGGGAGGACATTGC+AGG | 0.438533 | 4_4:-79120542 | Msa0706170:CDS |
| TGCCAACCTTTAGCAGCGTC+TGG | 0.442521 | 4_4:+79123428 | None:intergenic |
| ATGCCTTCCCGTACTGGTCT+TGG | 0.444253 | 4_4:-79121438 | Msa0706170:CDS |
| GTTGAGATAAGGTCAGATAA+AGG | 0.456004 | 4_4:-79124633 | Msa0706170:CDS |
| CACTATATCAGGAATTCCTT+TGG | 0.458311 | 4_4:-79120708 | Msa0706170:CDS |
| CATTGGAGATGAATTGTGTT+GGG | 0.463185 | 4_4:+79121480 | None:intergenic |
| TGAGGGTTTGGCTGAGGCTG+AGG | 0.463885 | 4_4:+79125536 | None:intergenic |
| GTTGCTTCTCAGAGTGGTTA+CGG | 0.464592 | 4_4:-79123128 | Msa0706170:CDS |
| CTGCCACATTGGAAAATAAG+AGG | 0.465184 | 4_4:-79124530 | Msa0706170:intron |
| GGAATGATGCCTTCCCGTAC+TGG | 0.465833 | 4_4:-79121444 | Msa0706170:CDS |
| AACCTTTAGCAGCGTCTGGC+AGG | 0.465847 | 4_4:+79123432 | None:intergenic |
| CTTCTTGTGACAAACATAGA+TGG | 0.468718 | 4_4:-79124584 | Msa0706170:CDS |
| CATCGACAAGAGAAGATTGC+TGG | 0.471945 | 4_4:-79119241 | Msa0706170:CDS |
| ACAAGAGAAGATTGCTGGTA+TGG | 0.473453 | 4_4:-79119236 | Msa0706170:CDS |
| TTCCTCCACATTCTTGACAT+TGG | 0.473595 | 4_4:+79121463 | None:intergenic |
| GCTCTTGGGGTAACTGGGAG+TGG | 0.474303 | 4_4:-79121172 | Msa0706170:CDS |
| CACGCAGAGATGATGACTGC+TGG | 0.475665 | 4_4:-79120022 | Msa0706170:CDS |
| ATCCATACCAAAAGTTATGA+AGG | 0.482011 | 4_4:+79123241 | None:intergenic |
| AATATAGTTACTGTTGTTGG+CGG | 0.484004 | 4_4:-79121516 | Msa0706170:intron |
| CTTCTGTCTCTGCGGTTGAA+GGG | 0.484880 | 4_4:+79125626 | None:intergenic |
| AATGGGAGCCTCGGGTTGGA+CGG | 0.487150 | 4_4:+79119153 | None:intergenic |
| ATAGATGGTGCAAAATAGTA+AGG | 0.487614 | 4_4:-79124569 | Msa0706170:CDS |
| AGGAGGAGGAGTCGAGTACA+AGG | 0.490601 | 4_4:-79125749 | Msa0706170:five_prime_UTR |
| TTCATCGTGTGAGCGTCTTA+GGG | 0.495397 | 4_4:+79122608 | None:intergenic |
| ACAAGAAGTGGTTGATATCT+CGG | 0.496001 | 4_4:+79124599 | None:intergenic |
| CGAATACAATACTTGTTGAC+GGG | 0.496243 | 4_4:-79124048 | Msa0706170:CDS |
| CTTTGCCCAGATTTCATCTG+AGG | 0.498710 | 4_4:+79125518 | None:intergenic |
| TTGATTAACCATTGTTGTGT+TGG | 0.499428 | 4_4:+79122109 | None:intergenic |
| TTCCCCAGATACTTTAAGAC+CGG | 0.502305 | 4_4:-79121134 | Msa0706170:intron |
| ACATCAGGAATGGGAGCCTC+GGG | 0.503122 | 4_4:+79119145 | None:intergenic |
| CTGGAAAGAAGAGTAGAAAG+AGG | 0.503447 | 4_4:-79122139 | Msa0706170:CDS |
| AACCTTCTTTAGCAGGGCCT+GGG | 0.506871 | 4_4:+79123972 | None:intergenic |
| ATACCGGTCTTAAAGTATCT+GGG | 0.508216 | 4_4:+79121131 | None:intergenic |
| AACAAAAGTTATTTCTCCAA+GGG | 0.517195 | 4_4:+79119042 | None:intergenic |
| AGGTGACACTGTTGTTATCA+AGG | 0.518945 | 4_4:-79124011 | Msa0706170:CDS |
| TCTATGTTTGTCACAAGAAG+TGG | 0.520189 | 4_4:+79124587 | None:intergenic |
| AGAAGAGTAGAAAGAGGGAG+AGG | 0.520590 | 4_4:-79122133 | Msa0706170:CDS |
| AGGAACACCAAGACCAGTAC+GGG | 0.523085 | 4_4:+79121431 | None:intergenic |
| GATGAAATCTGGGCAAAGCT+TGG | 0.523498 | 4_4:-79125513 | Msa0706170:intron |
| TACATCAGGAATGGGAGCCT+CGG | 0.527777 | 4_4:+79119144 | None:intergenic |
| GGAGTGCTCTTGGGGTAACT+GGG | 0.528059 | 4_4:-79121177 | Msa0706170:CDS |
| ATCCCAGGCCCTGCTAAAGA+AGG | 0.531972 | 4_4:-79123974 | Msa0706170:intron |
| CAAACCCTCAGATGAAATCT+GGG | 0.534656 | 4_4:-79125523 | Msa0706170:CDS |
| TGATCTATGTTCTGCCACAT+TGG | 0.537688 | 4_4:-79124541 | Msa0706170:CDS |
| ATTGACGACTTACAATATTG+AGG | 0.540097 | 4_4:+79121411 | None:intergenic |
| TGGAAAGAAGAGTAGAAAGA+GGG | 0.541410 | 4_4:-79122138 | Msa0706170:CDS |
| AAACAAAAGTTATTTCTCCA+AGG | 0.542220 | 4_4:+79119041 | None:intergenic |
| TACGAGCATGCTCTTCACTA+CGG | 0.546956 | 4_4:+79119192 | None:intergenic |
| TCGAATACAATACTTGTTGA+CGG | 0.547773 | 4_4:-79124049 | Msa0706170:CDS |
| AACCTGCCAGACGCTGCTAA+AGG | 0.548289 | 4_4:-79123434 | Msa0706170:intron |
| AACGGCACATGAGGAGGAGG+AGG | 0.551814 | 4_4:-79125763 | Msa0706170:five_prime_UTR |
| GACACTGTTGTTATCAAGGA+TGG | 0.557449 | 4_4:-79124007 | Msa0706170:CDS |
| CTGCTGGGACTCTTGTATGC+AGG | 0.559802 | 4_4:-79120006 | Msa0706170:intron |
| ACATTGGAGATGAATTGTGT+TGG | 0.560400 | 4_4:+79121479 | None:intergenic |
| GGTTCTAACCTTCTTTAGCA+GGG | 0.562583 | 4_4:+79123966 | None:intergenic |
| CTTGTTGACGGGGCTGAGGT+AGG | 0.563829 | 4_4:-79124037 | Msa0706170:CDS |
| ATATAGTTACTGTTGTTGGC+GGG | 0.563910 | 4_4:-79121515 | Msa0706170:intron |
| TACCAAAAGTTATGAAGGCA+TGG | 0.567796 | 4_4:+79123246 | None:intergenic |
| AGCATACTGGAGTGCTCTTG+GGG | 0.568477 | 4_4:-79121185 | Msa0706170:CDS |
| GATGGAAGTGAAATTATCCC+AGG | 0.568941 | 4_4:-79123989 | Msa0706170:CDS |
| CATAAAATGTACCTCCGCAA+TGG | 0.570468 | 4_4:+79123020 | None:intergenic |
| CAGGAATGGGAGCCTCGGGT+TGG | 0.571703 | 4_4:+79119149 | None:intergenic |
| TGAACAACTGCTCTGCATTG+AGG | 0.571757 | 4_4:+79123072 | None:intergenic |
| ACATATAACGGCACATGAGG+AGG | 0.574492 | 4_4:-79125769 | None:intergenic |
| GAGGAACACCAAGACCAGTA+CGG | 0.576761 | 4_4:+79121430 | None:intergenic |
| TTTGCCCAGATTTCATCTGA+GGG | 0.577223 | 4_4:+79125519 | None:intergenic |
| AATACTTGTTGACGGGGCTG+AGG | 0.579359 | 4_4:-79124041 | Msa0706170:CDS |
| ACGCAGAGATGATGACTGCT+GGG | 0.580333 | 4_4:-79120021 | Msa0706170:CDS |
| AAATGTTGAAGAGAGTACAG+AGG | 0.585397 | 4_4:+79125712 | None:intergenic |
| GATACCCTGATGTTGAGATA+AGG | 0.592015 | 4_4:-79124644 | Msa0706170:CDS |
| CATCTCCAATGTCAAGAATG+TGG | 0.595968 | 4_4:-79121468 | Msa0706170:CDS |
| ACAATGGTTAATCAAAGTGA+TGG | 0.600338 | 4_4:-79122101 | Msa0706170:CDS |
| GAAGAGTAGAAAGAGGGAGA+GGG | 0.601728 | 4_4:-79122132 | Msa0706170:CDS |
| ATGACATATAACGGCACATG+AGG | 0.602597 | 4_4:-79125772 | None:intergenic |
| GACGGGGCTGAGGTAGGCAA+AGG | 0.614953 | 4_4:-79124031 | Msa0706170:CDS |
| TCTCTTGTCGATGCTTCTGG+TGG | 0.614968 | 4_4:+79119251 | None:intergenic |
| TAGACACGTATGCATCAGTA+CGG | 0.616582 | 4_4:-79122575 | Msa0706170:CDS |
| TATAACGGCACATGAGGAGG+AGG | 0.623291 | 4_4:-79125766 | None:intergenic |
| AGAGTGGTTACGGAGATCGC+AGG | 0.625643 | 4_4:-79123118 | Msa0706170:CDS |
| CATGTTTGCCGTCCAACCCG+AGG | 0.626223 | 4_4:-79119161 | Msa0706170:CDS |
| GCAATGGTTGCTTCTCAGAG+TGG | 0.628676 | 4_4:-79123134 | Msa0706170:CDS |
| ACAAAAGTTATTTCTCCAAG+GGG | 0.634278 | 4_4:+79119043 | None:intergenic |
| TCACTTTCTGCGTACCATTG+CGG | 0.637417 | 4_4:-79123034 | Msa0706170:CDS |
| GAATACAATACTTGTTGACG+GGG | 0.649367 | 4_4:-79124047 | Msa0706170:CDS |
| CTTTCTGCGTACCATTGCGG+AGG | 0.651375 | 4_4:-79123031 | Msa0706170:intron |
| CTGACCTTATCTCAACATCA+GGG | 0.653471 | 4_4:+79124640 | None:intergenic |
| CTCCAATGTCAAGAATGTGG+AGG | 0.656462 | 4_4:-79121465 | Msa0706170:CDS |
| TACCGGTCTTAAAGTATCTG+GGG | 0.664313 | 4_4:+79121132 | None:intergenic |
| ACACCAAGACCAGTACGGGA+AGG | 0.675842 | 4_4:+79121435 | None:intergenic |
| GGAGAGGGCCAACACAACAA+TGG | 0.677151 | 4_4:-79122117 | Msa0706170:CDS |
| GATCATCACTGTTCGCAGTG+TGG | 0.679793 | 4_4:-79122074 | Msa0706170:intron |
| GAAAGAATCTTCTGTCTCTG+CGG | 0.685151 | 4_4:+79125618 | None:intergenic |
| GTTGCATAAGACAAATGGGG+AGG | 0.689280 | 4_4:-79120552 | Msa0706170:CDS |
| AAAGTTGCATAAGACAAATG+GGG | 0.704630 | 4_4:-79120555 | Msa0706170:CDS |
| GCTGGTATGGATATGCATGT+CGG | 0.705108 | 4_4:-79119223 | Msa0706170:CDS |
| TGCAGGATGTCATATCAGAG+TGG | 0.708106 | 4_4:-79120525 | Msa0706170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATTTATATGCATTTAT+TGG | + | chr4_4:79119018-79119037 | None:intergenic | 10.0% |
| !!! | TTTTTTAAATTAGAATCAAA+AGG | - | chr4_4:79119295-79119314 | Msa0706170:intron | 10.0% |
| !!! | TTTTTAAATTAGAATCAAAA+GGG | - | chr4_4:79119296-79119315 | Msa0706170:intron | 10.0% |
| !!! | AATTTTTTAAGAGATAAAAA+TGG | + | chr4_4:79119385-79119404 | None:intergenic | 10.0% |
| !!! | TATATCTTAACAATTTTATA+GGG | - | chr4_4:79119513-79119532 | Msa0706170:intron | 10.0% |
| !!! | CAAAAAATAAATACTTTTTT+TGG | + | chr4_4:79120585-79120604 | None:intergenic | 10.0% |
| !!! | AAAAAAATATAGTTCATTTT+TGG | + | chr4_4:79122417-79122436 | None:intergenic | 10.0% |
| !!! | AAATGTCTTAAATTTTTTTT+TGG | - | chr4_4:79125697-79125716 | Msa0706170:five_prime_UTR | 10.0% |
| !! | TAAAAAATTCAATTCATGTT+AGG | - | chr4_4:79119396-79119415 | Msa0706170:intron | 15.0% |
| !!! | CTATATCTTAACAATTTTAT+AGG | - | chr4_4:79119512-79119531 | Msa0706170:intron | 15.0% |
| !!! | AAATTGTGTTTTAAATTGTT+TGG | - | chr4_4:79120802-79120821 | Msa0706170:intron | 15.0% |
| !!! | TATGATTGATATTTTTAACA+TGG | - | chr4_4:79121020-79121039 | Msa0706170:intron | 15.0% |
| !! | GCTTAGAAATAATAAATTAA+TGG | + | chr4_4:79121139-79121158 | None:intergenic | 15.0% |
| !!! | TCATTTTCTTTGTAAAATTT+TGG | + | chr4_4:79122206-79122225 | None:intergenic | 15.0% |
| !!! | AAATTTTACAAAGAAAATGA+AGG | - | chr4_4:79122206-79122225 | Msa0706170:intron | 15.0% |
| !! | CAAAAAGTTATTAACTTTAA+CGG | + | chr4_4:79123596-79123615 | None:intergenic | 15.0% |
| !!! | TTATTTTTTTTCTATTGTCT+TGG | - | chr4_4:79124609-79124628 | Msa0706170:CDS | 15.0% |
| !!! | ATTTATACTGAATTAATTTG+CGG | - | chr4_4:79124829-79124848 | Msa0706170:intron | 15.0% |
| !! | AGATTGCATAAATTAATATT+TGG | + | chr4_4:79125229-79125248 | None:intergenic | 15.0% |
| !! | AACAAAAACAAAAATCAAAA+GGG | + | chr4_4:79125385-79125404 | None:intergenic | 15.0% |
| !! | AAACAAAAACAAAAATCAAA+AGG | + | chr4_4:79125386-79125405 | None:intergenic | 15.0% |
| !!! | AAATATATTTGTTTTACATC+AGG | + | chr4_4:79125553-79125572 | None:intergenic | 15.0% |
| !!! | TTCTAATTGATTTTGATCAA+TGG | - | chr4_4:79119082-79119101 | Msa0706170:three_prime_UTR | 20.0% |
| !!! | TCTAATTGATTTTGATCAAT+GGG | - | chr4_4:79119083-79119102 | Msa0706170:three_prime_UTR | 20.0% |
| !! | ATAATTTAGTATGTGGAATA+AGG | + | chr4_4:79119204-79119223 | None:intergenic | 20.0% |
| !!! | TTAATGGATAATTTAGTATG+TGG | + | chr4_4:79119211-79119230 | None:intergenic | 20.0% |
| !!! | TTTTTAAGAGATAAAAATGG+AGG | + | chr4_4:79119382-79119401 | None:intergenic | 20.0% |
| !! | TTAAATAGTGATAACAGTTA+CGG | - | chr4_4:79119631-79119650 | Msa0706170:intron | 20.0% |
| !! | TCAAACAAAACTAATTATCT+TGG | + | chr4_4:79120240-79120259 | None:intergenic | 20.0% |
| !!! | AAATTATTTTTCAGAGAAAC+AGG | - | chr4_4:79120264-79120283 | Msa0706170:intron | 20.0% |
| !!! | AATTATTTTTCAGAGAAACA+GGG | - | chr4_4:79120265-79120284 | Msa0706170:intron | 20.0% |
| !! | CACTAGCATAAATATTAAAA+AGG | + | chr4_4:79120738-79120757 | None:intergenic | 20.0% |
| !! | TTATATGTATAATCAGCTAT+AGG | + | chr4_4:79120769-79120788 | None:intergenic | 20.0% |
| !!! | TTTACTGGTTAATTATTCAA+TGG | + | chr4_4:79121055-79121074 | None:intergenic | 20.0% |
| !! | ACCAGTAAATATATTTAATG+TGG | - | chr4_4:79121066-79121085 | Msa0706170:intron | 20.0% |
| !! | TCCACATTAAATATATTTAC+TGG | + | chr4_4:79121070-79121089 | None:intergenic | 20.0% |
| !!! | TTATCTTTAAGCAAAGTATT+TGG | - | chr4_4:79121104-79121123 | Msa0706170:intron | 20.0% |
| !! | ATGACATAAAATTGCATAAA+CGG | + | chr4_4:79121790-79121809 | None:intergenic | 20.0% |
| !! | AGAGAAATCATGATAATTAA+AGG | + | chr4_4:79122345-79122364 | None:intergenic | 20.0% |
| !!! | ACTATATTTTTTTGTTGTTG+TGG | - | chr4_4:79122424-79122443 | Msa0706170:intron | 20.0% |
| !!! | CTATATTTTTTTGTTGTTGT+GGG | - | chr4_4:79122425-79122444 | Msa0706170:intron | 20.0% |
| !!! | TATATTTTTTTGTTGTTGTG+GGG | - | chr4_4:79122426-79122445 | Msa0706170:intron | 20.0% |
| !!! | ATTTTTCCAATAAAATTCCA+TGG | + | chr4_4:79122486-79122505 | None:intergenic | 20.0% |
| !!! | TTTATTGTATTTTCACTGTT+AGG | - | chr4_4:79122509-79122528 | Msa0706170:intron | 20.0% |
| !! | GAAAAGAAAATAAGTCTAAA+TGG | + | chr4_4:79122950-79122969 | None:intergenic | 20.0% |
| !!! | ACAAAATTCAAATCTTTTTC+AGG | + | chr4_4:79122994-79123013 | None:intergenic | 20.0% |
| !!! | GTTCTTATATTTTTGTGTAA+TGG | - | chr4_4:79123634-79123653 | Msa0706170:intron | 20.0% |
| !! | CAACAACAAAAATGTTTATT+CGG | + | chr4_4:79124040-79124059 | None:intergenic | 20.0% |
| !!! | TTTACTATGTTTATGTTTTG+TGG | - | chr4_4:79124087-79124106 | Msa0706170:intron | 20.0% |
| !! | TCTTACAAAAAGTAATTCAT+TGG | - | chr4_4:79124514-79124533 | Msa0706170:intron | 20.0% |
| !!! | ATTTACCTAGATGTTTTAAT+AGG | - | chr4_4:79124730-79124749 | Msa0706170:intron | 20.0% |
| !!! | TAATTTTAAGGTTTGACATT+GGG | + | chr4_4:79124756-79124775 | None:intergenic | 20.0% |
| !!! | ATAATTTTAAGGTTTGACAT+TGG | + | chr4_4:79124757-79124776 | None:intergenic | 20.0% |
| !! | TCAAACCTTAAAATTATTGA+AGG | - | chr4_4:79124760-79124779 | Msa0706170:intron | 20.0% |
| !!! | AGAGTTCAATATGATTTTTT+TGG | + | chr4_4:79124883-79124902 | None:intergenic | 20.0% |
| !! | AAAAGAATATGAACATTCAA+AGG | + | chr4_4:79125024-79125043 | None:intergenic | 20.0% |
| !!! | TGATTTTTTTGGTAAAAAAG+TGG | - | chr4_4:79125199-79125218 | Msa0706170:intron | 20.0% |
| !!! | GTTGAAGGGTTTTTATTTTA+GGG | + | chr4_4:79119043-79119062 | None:intergenic | 25.0% |
| ! | TCCATTAAAGTTTCAATCTT+TGG | - | chr4_4:79119223-79119242 | Msa0706170:CDS | 25.0% |
| ! | CCATTAAAGTTTCAATCTTT+GGG | - | chr4_4:79119224-79119243 | Msa0706170:CDS | 25.0% |
| !! | ATCAAAAGGGTTGAAATTTT+TGG | - | chr4_4:79119309-79119328 | Msa0706170:intron | 25.0% |
| !!! | TTTTAGGGCTTCAATTTTAT+AGG | - | chr4_4:79119462-79119481 | Msa0706170:intron | 25.0% |
| !!! | TTTAGGGCTTCAATTTTATA+GGG | - | chr4_4:79119463-79119482 | Msa0706170:intron | 25.0% |
| ! | TTATCACTATTTAAAAACCC+TGG | + | chr4_4:79119625-79119644 | None:intergenic | 25.0% |
| ! | CAAATGTGTTAGTAATTATC+AGG | + | chr4_4:79119792-79119811 | None:intergenic | 25.0% |
| ! | CTTTAACTGTTATATGAGTT+TGG | - | chr4_4:79119812-79119831 | Msa0706170:intron | 25.0% |
| ! | AAAACAAGTGTGGAAAATAA+AGG | - | chr4_4:79119845-79119864 | Msa0706170:intron | 25.0% |
| ! | AAATATGATGAAAACTCATC+TGG | - | chr4_4:79119884-79119903 | Msa0706170:intron | 25.0% |
| ! | AATATGATGAAAACTCATCT+GGG | - | chr4_4:79119885-79119904 | Msa0706170:intron | 25.0% |
| ! | TAATTATCTTGGCAGATATA+GGG | + | chr4_4:79120229-79120248 | None:intergenic | 25.0% |
| !! | TTAAAACAGTGATGATGAAA+TGG | + | chr4_4:79120330-79120349 | None:intergenic | 25.0% |
| ! | GTATACTTTCAATACTTGAA+CGG | + | chr4_4:79120508-79120527 | None:intergenic | 25.0% |
| ! | GTAGTATTTGCTTAAACATA+TGG | - | chr4_4:79121390-79121409 | Msa0706170:intron | 25.0% |
| ! | CATAGAAAATATGAATGTTC+TGG | - | chr4_4:79121932-79121951 | Msa0706170:intron | 25.0% |
| ! | ATTTCATATAGTTGATCACT+AGG | - | chr4_4:79121966-79121985 | Msa0706170:intron | 25.0% |
| ! | TCAAATAACACAACTCTTAA+AGG | + | chr4_4:79122152-79122171 | None:intergenic | 25.0% |
| ! | TTACAAAGAAAATGAAGGAT+TGG | - | chr4_4:79122211-79122230 | Msa0706170:intron | 25.0% |
| ! | TCACAAAAGTTGTCAAAAAA+TGG | - | chr4_4:79122297-79122316 | Msa0706170:intron | 25.0% |
| ! | CTCCAACTTTAATGAAATAT+TGG | - | chr4_4:79122390-79122409 | Msa0706170:intron | 25.0% |
| ! | GTCCAATATTTCATTAAAGT+TGG | + | chr4_4:79122395-79122414 | None:intergenic | 25.0% |
| ! | GAATCATTCAAGATATACAT+AGG | - | chr4_4:79122827-79122846 | Msa0706170:intron | 25.0% |
| ! | ATAGAAAACACACATTCTTA+AGG | + | chr4_4:79122855-79122874 | None:intergenic | 25.0% |
| !!! | AGATTTGAATTTTGTTTGTG+TGG | - | chr4_4:79122999-79123018 | Msa0706170:intron | 25.0% |
| !!! | GATTTGAATTTTGTTTGTGT+GGG | - | chr4_4:79123000-79123019 | Msa0706170:intron | 25.0% |
| !!! | ATTTGAATTTTGTTTGTGTG+GGG | - | chr4_4:79123001-79123020 | Msa0706170:intron | 25.0% |
| ! | CAGAATTACAATAGCAAATT+GGG | + | chr4_4:79123031-79123050 | None:intergenic | 25.0% |
| ! | TTCAATATAGTTACTGTTGT+TGG | - | chr4_4:79123161-79123180 | Msa0706170:intron | 25.0% |
| !!! | TTGTTTTTCCACTTTCTTTA+TGG | - | chr4_4:79123382-79123401 | Msa0706170:intron | 25.0% |
| !! | TTCATGTTGTCATTTATTGT+AGG | - | chr4_4:79123445-79123464 | Msa0706170:CDS | 25.0% |
| !!! | TATATTTTTGTGTAATGGTG+TGG | - | chr4_4:79123639-79123658 | Msa0706170:intron | 25.0% |
| !! | ATAATTTTCTTCTCTTCCTA+GGG | - | chr4_4:79123882-79123901 | Msa0706170:intron | 25.0% |
| ! | TATGAAAACAATAAATAGCC+AGG | + | chr4_4:79124339-79124358 | None:intergenic | 25.0% |
| !! | TTATTGTTTTCATAGCATGA+AGG | - | chr4_4:79124345-79124364 | Msa0706170:intron | 25.0% |
| ! | AAGGAAACAAAATGTAAACA+AGG | - | chr4_4:79124364-79124383 | Msa0706170:intron | 25.0% |
| ! | CTTATGTATAAGTCAATATC+TGG | + | chr4_4:79124586-79124605 | None:intergenic | 25.0% |
| !! | TGCAACCTTCAATAATTTTA+AGG | + | chr4_4:79124768-79124787 | None:intergenic | 25.0% |
| !!! | ATGATTTTTTTGGCATTGTT+GGG | + | chr4_4:79124873-79124892 | None:intergenic | 25.0% |
| !!! | TATGATTTTTTTGGCATTGT+TGG | + | chr4_4:79124874-79124893 | None:intergenic | 25.0% |
| !!! | CAATGAATGGATGATTTTTT+TGG | - | chr4_4:79125188-79125207 | Msa0706170:intron | 25.0% |
| !!! | ATTTGTTTTACATCAGGAAT+GGG | + | chr4_4:79125547-79125566 | None:intergenic | 25.0% |
| !!! | TATTTGTTTTACATCAGGAA+TGG | + | chr4_4:79125548-79125567 | None:intergenic | 25.0% |
| ! | AAAAAAAAAAAATAGCCCCT+TGG | - | chr4_4:79125622-79125641 | Msa0706170:five_prime_UTR | 25.0% |
| !!! | AACAAAAGTTATTTCTCCAA+GGG | + | chr4_4:79125641-79125660 | None:intergenic | 25.0% |
| !!! | AAACAAAAGTTATTTCTCCA+AGG | + | chr4_4:79125642-79125661 | None:intergenic | 25.0% |
| !!! | AGAAATAACTTTTGTTTGCT+TGG | - | chr4_4:79125645-79125664 | Msa0706170:five_prime_UTR | 25.0% |
| !!! | GGTTGAAGGGTTTTTATTTT+AGG | + | chr4_4:79119044-79119063 | None:intergenic | 30.0% |
| AGTATGTGGAATAAGGAAAA+GGG | + | chr4_4:79119197-79119216 | None:intergenic | 30.0% | |
| TAGTATGTGGAATAAGGAAA+AGG | + | chr4_4:79119198-79119217 | None:intergenic | 30.0% | |
| CCCAAAGATTGAAACTTTAA+TGG | + | chr4_4:79119227-79119246 | None:intergenic | 30.0% | |
| ! | TTCATAATTTTTCCCCTCTT+TGG | - | chr4_4:79119250-79119269 | Msa0706170:CDS | 30.0% |
| ! | TCATAATTTTTCCCCTCTTT+GGG | - | chr4_4:79119251-79119270 | Msa0706170:CDS | 30.0% |
| TTAAGATGAAATCCCAAAGA+GGG | + | chr4_4:79119266-79119285 | None:intergenic | 30.0% | |
| ATTAAGATGAAATCCCAAAG+AGG | + | chr4_4:79119267-79119286 | None:intergenic | 30.0% | |
| !!! | TGCGTGCATGTTATTTTTTT+AGG | - | chr4_4:79119446-79119465 | Msa0706170:intron | 30.0% |
| !!! | GCGTGCATGTTATTTTTTTA+GGG | - | chr4_4:79119447-79119466 | Msa0706170:intron | 30.0% |
| ! | TTAGGGCTTCAATTTTATAG+GGG | - | chr4_4:79119464-79119483 | Msa0706170:intron | 30.0% |
| !! | TTTTCCACACTTGTTTTCAA+GGG | + | chr4_4:79119842-79119861 | None:intergenic | 30.0% |
| !! | ATTTTCCACACTTGTTTTCA+AGG | + | chr4_4:79119843-79119862 | None:intergenic | 30.0% |
| AAGTGTGGAAAATAAAGGAA+TGG | - | chr4_4:79119850-79119869 | Msa0706170:intron | 30.0% | |
| !! | ATTAGTATCCCCTCTAAAAT+GGG | + | chr4_4:79119919-79119938 | None:intergenic | 30.0% |
| ! | AATTAGTATCCCCTCTAAAA+TGG | + | chr4_4:79119920-79119939 | None:intergenic | 30.0% |
| !! | TTTTAGAGGGGATACTAATT+TGG | - | chr4_4:79119920-79119939 | Msa0706170:intron | 30.0% |
| CTCTTAAATTACCAAGTGAA+GGG | - | chr4_4:79119943-79119962 | Msa0706170:intron | 30.0% | |
| ACAAAATATATCCCTTCACT+TGG | + | chr4_4:79119957-79119976 | None:intergenic | 30.0% | |
| ! | TGAAGTTTGAGACTTTCTTA+AGG | - | chr4_4:79119978-79119997 | Msa0706170:intron | 30.0% |
| ! | GAAGTTTGAGACTTTCTTAA+GGG | - | chr4_4:79119979-79119998 | Msa0706170:intron | 30.0% |
| ATAGATGGTGCAAAATAGTA+AGG | - | chr4_4:79120111-79120130 | Msa0706170:intron | 30.0% | |
| !!! | TTACCTCTTATTTTCCAATG+TGG | + | chr4_4:79120156-79120175 | None:intergenic | 30.0% |
| CTAATTATCTTGGCAGATAT+AGG | + | chr4_4:79120230-79120249 | None:intergenic | 30.0% | |
| ATATCGTTCAAAAATGCTGT+TGG | - | chr4_4:79120365-79120384 | Msa0706170:intron | 30.0% | |
| TTTCAGCTTCATGATAGTAA+AGG | - | chr4_4:79120428-79120447 | Msa0706170:intron | 30.0% | |
| AATACTTGAACGGAAAAGAA+AGG | + | chr4_4:79120498-79120517 | None:intergenic | 30.0% | |
| ACAACATATATGCAGAAGAA+AGG | + | chr4_4:79120552-79120571 | None:intergenic | 30.0% | |
| ! | TCGAATACAATACTTGTTGA+CGG | - | chr4_4:79120631-79120650 | Msa0706170:intron | 30.0% |
| TATGTATAATCAGCTATAGG+AGG | + | chr4_4:79120766-79120785 | None:intergenic | 30.0% | |
| AGTTAACTCAATAAAAGTCC+TGG | - | chr4_4:79120835-79120854 | Msa0706170:intron | 30.0% | |
| GTTAACTCAATAAAAGTCCT+GGG | - | chr4_4:79120836-79120855 | Msa0706170:intron | 30.0% | |
| ! | TCACTGGTTATGAACATAAT+TGG | + | chr4_4:79120956-79120975 | None:intergenic | 30.0% |
| ATTCCATCATTACCACTTTA+TGG | - | chr4_4:79121177-79121196 | Msa0706170:CDS | 30.0% | |
| ATCCATACCAAAAGTTATGA+AGG | + | chr4_4:79121442-79121461 | None:intergenic | 30.0% | |
| ! | TCCTCTTTTTCTAATGAACA+TGG | - | chr4_4:79121475-79121494 | Msa0706170:CDS | 30.0% |
| ACCATGTTCATTAGAAAAAG+AGG | + | chr4_4:79121479-79121498 | None:intergenic | 30.0% | |
| AGATTAAGCTGAATTGCAAA+TGG | - | chr4_4:79121699-79121718 | Msa0706170:intron | 30.0% | |
| GATTAAGCTGAATTGCAAAT+GGG | - | chr4_4:79121700-79121719 | Msa0706170:intron | 30.0% | |
| AAACCTCTTGTTCATAGTTA+TGG | - | chr4_4:79121819-79121838 | Msa0706170:intron | 30.0% | |
| AACCTCTTGTTCATAGTTAT+GGG | - | chr4_4:79121820-79121839 | Msa0706170:intron | 30.0% | |
| !!! | TGTTGTTATTTTTACACAGC+AGG | - | chr4_4:79122002-79122021 | Msa0706170:intron | 30.0% |
| ! | GTTTTTCCTATACCTTTTTC+AGG | - | chr4_4:79122028-79122047 | Msa0706170:intron | 30.0% |
| TTAAAGGAATCATACTCACA+AGG | + | chr4_4:79122136-79122155 | None:intergenic | 30.0% | |
| ! | TCTTTGCCATGGAATTTTAT+TGG | - | chr4_4:79122477-79122496 | Msa0706170:intron | 30.0% |
| ! | TATTTTCACTGTTAGGTCAT+TGG | - | chr4_4:79122516-79122535 | Msa0706170:intron | 30.0% |
| TTGATTAACCATTGTTGTGT+TGG | + | chr4_4:79122574-79122593 | None:intergenic | 30.0% | |
| ACAATGGTTAATCAAAGTGA+TGG | - | chr4_4:79122579-79122598 | Msa0706170:CDS | 30.0% | |
| AGAAAACCAAGAAGATTGAT+GGG | + | chr4_4:79122692-79122711 | None:intergenic | 30.0% | |
| CACAATACAGAATACAAACA+CGG | + | chr4_4:79122765-79122784 | None:intergenic | 30.0% | |
| !! | GTTTTCTATTTTGAGCTGAA+TGG | - | chr4_4:79122866-79122885 | Msa0706170:intron | 30.0% |
| ATAAGTCTAAATGGCATTTC+TGG | + | chr4_4:79122941-79122960 | None:intergenic | 30.0% | |
| GCAGAATTACAATAGCAAAT+TGG | + | chr4_4:79123032-79123051 | None:intergenic | 30.0% | |
| AATATAGTTACTGTTGTTGG+CGG | - | chr4_4:79123164-79123183 | Msa0706170:intron | 30.0% | |
| ATTGACGACTTACAATATTG+AGG | + | chr4_4:79123272-79123291 | None:intergenic | 30.0% | |
| ATAGTTCACCATAAAGAAAG+TGG | + | chr4_4:79123393-79123412 | None:intergenic | 30.0% | |
| ! | TTGTCATTTATTGTAGGCTT+AGG | - | chr4_4:79123451-79123470 | Msa0706170:CDS | 30.0% |
| ATAAACAAAGTAGTCCATAC+CGG | + | chr4_4:79123568-79123587 | None:intergenic | 30.0% | |
| !! | ACTTTTTGAAAGTTGCTTTC+TGG | - | chr4_4:79123608-79123627 | Msa0706170:intron | 30.0% |
| CGATTTCTTCAGATATTGTT+AGG | + | chr4_4:79123684-79123703 | None:intergenic | 30.0% | |
| ! | CATAATTTTCTTCTCTTCCT+AGG | - | chr4_4:79123881-79123900 | Msa0706170:intron | 30.0% |
| ATATCTGAACACACTATATC+AGG | - | chr4_4:79123961-79123980 | Msa0706170:intron | 30.0% | |
| ! | TTCATGCAGATTCTTTTCAT+GGG | + | chr4_4:79124001-79124020 | None:intergenic | 30.0% |
| TGAAAGTTGCATAAGACAAA+TGG | - | chr4_4:79124123-79124142 | Msa0706170:intron | 30.0% | |
| GAAAGTTGCATAAGACAAAT+GGG | - | chr4_4:79124124-79124143 | Msa0706170:intron | 30.0% | |
| AAAGTTGCATAAGACAAATG+GGG | - | chr4_4:79124125-79124144 | Msa0706170:intron | 30.0% | |
| AAGCTGAATAACAGAGAAAT+CGG | - | chr4_4:79124184-79124203 | Msa0706170:intron | 30.0% | |
| !!! | AGCTTTTTTCTTTCACCTTT+TGG | - | chr4_4:79124272-79124291 | Msa0706170:intron | 30.0% |
| !!! | GCTTTTTTCTTTCACCTTTT+GGG | - | chr4_4:79124273-79124292 | Msa0706170:intron | 30.0% |
| ACAAAAATTGAATCTTGTCC+TGG | - | chr4_4:79124318-79124337 | Msa0706170:intron | 30.0% | |
| AAACTTATCAAACATGCACT+TGG | - | chr4_4:79124438-79124457 | Msa0706170:intron | 30.0% | |
| TTGATCTGATTGTACATTGA+TGG | - | chr4_4:79124547-79124566 | Msa0706170:CDS | 30.0% | |
| TGTATGTACTATTTACCTAC+AGG | + | chr4_4:79124810-79124829 | None:intergenic | 30.0% | |
| ! | TACTGGTTGATGTACTTTAT+TGG | - | chr4_4:79124942-79124961 | Msa0706170:intron | 30.0% |
| GAATATGAACATTCAAAGGT+TGG | + | chr4_4:79125020-79125039 | None:intergenic | 30.0% | |
| ! | TTTAAGGTACTTACGTGTTT+GGG | + | chr4_4:79125112-79125131 | None:intergenic | 30.0% |
| ! | CTGATAATGCTTTGAGTTTA+AGG | + | chr4_4:79125128-79125147 | None:intergenic | 30.0% |
| !! | CTGTACTTTTTAGCAATGAA+TGG | - | chr4_4:79125175-79125194 | Msa0706170:intron | 30.0% |
| AATATTATCAGTTCGTTCAG+CGG | + | chr4_4:79125293-79125312 | None:intergenic | 30.0% | |
| !! | ACAAAAGTTATTTCTCCAAG+GGG | + | chr4_4:79125640-79125659 | None:intergenic | 30.0% |
| ! | AAATGTTGAAGAGAGTACAG+AGG | + | chr4_4:79118971-79118990 | None:intergenic | 35.0% |
| ! | TTTTGATCAATGGGAGAAAG+TGG | - | chr4_4:79119092-79119111 | Msa0706170:three_prime_UTR | 35.0% |
| GTATGTGGAATAAGGAAAAG+GGG | + | chr4_4:79119196-79119215 | None:intergenic | 35.0% | |
| TAAGATGAAATCCCAAAGAG+GGG | + | chr4_4:79119265-79119284 | None:intergenic | 35.0% | |
| CAGTAGAAGTAATTAACCAG+TGG | + | chr4_4:79119424-79119443 | None:intergenic | 35.0% | |
| ATTCTCCGCAATATCAAGAA+TGG | + | chr4_4:79119665-79119684 | None:intergenic | 35.0% | |
| ! | AACGGATTTGATGTTGTCAA+AGG | + | chr4_4:79119727-79119746 | None:intergenic | 35.0% |
| !! | TTTCCACACTTGTTTTCAAG+GGG | + | chr4_4:79119841-79119860 | None:intergenic | 35.0% |
| ! | GTTTGTCATCCCATTTTAGA+GGG | - | chr4_4:79119907-79119926 | Msa0706170:intron | 35.0% |
| !! | TTTGTCATCCCATTTTAGAG+GGG | - | chr4_4:79119908-79119927 | Msa0706170:intron | 35.0% |
| GCTCTTAAATTACCAAGTGA+AGG | - | chr4_4:79119942-79119961 | Msa0706170:intron | 35.0% | |
| GTTGAGATAAGGTCAGATAA+AGG | - | chr4_4:79120047-79120066 | Msa0706170:CDS | 35.0% | |
| ! | ACAAGAAGTGGTTGATATCT+CGG | + | chr4_4:79120084-79120103 | None:intergenic | 35.0% |
| TCTATGTTTGTCACAAGAAG+TGG | + | chr4_4:79120096-79120115 | None:intergenic | 35.0% | |
| CTTCTTGTGACAAACATAGA+TGG | - | chr4_4:79120096-79120115 | Msa0706170:intron | 35.0% | |
| AACGATATGTGACGAACAAT+GGG | + | chr4_4:79120353-79120372 | None:intergenic | 35.0% | |
| AAAATGCTGTTGGAGCTTAT+AGG | - | chr4_4:79120375-79120394 | Msa0706170:intron | 35.0% | |
| ! | CGAATACAATACTTGTTGAC+GGG | - | chr4_4:79120632-79120651 | Msa0706170:intron | 35.0% |
| ! | GAATACAATACTTGTTGACG+GGG | - | chr4_4:79120633-79120652 | Msa0706170:intron | 35.0% |
| ! | TGAAAGCATGAACACTATTG+AGG | + | chr4_4:79120989-79121008 | None:intergenic | 35.0% |
| ! | ATGCCATAAAGTGGTAATGA+TGG | + | chr4_4:79121183-79121202 | None:intergenic | 35.0% |
| CATTACCACTTTATGGCATT+AGG | - | chr4_4:79121184-79121203 | Msa0706170:CDS | 35.0% | |
| CAAATCCTAATGCCATAAAG+TGG | + | chr4_4:79121192-79121211 | None:intergenic | 35.0% | |
| ! | CAGTATCGAAGAAGACATTA+AGG | + | chr4_4:79121298-79121317 | None:intergenic | 35.0% |
| TACCAAAAGTTATGAAGGCA+TGG | + | chr4_4:79121437-79121456 | None:intergenic | 35.0% | |
| ! | TGCCTTCATAACTTTTGGTA+TGG | - | chr4_4:79121437-79121456 | Msa0706170:CDS | 35.0% |
| AGAGCAGTTGTTCAATTTGT+TGG | - | chr4_4:79121617-79121636 | Msa0706170:intron | 35.0% | |
| ! | GAGCAGTTGTTCAATTTGTT+GGG | - | chr4_4:79121618-79121637 | Msa0706170:intron | 35.0% |
| TGACATAAAGCATAGCATGT+AGG | - | chr4_4:79121743-79121762 | Msa0706170:intron | 35.0% | |
| ! | CCATATCCTGAAAAAGGTAT+AGG | + | chr4_4:79122037-79122056 | None:intergenic | 35.0% |
| !!! | CCTATACCTTTTTCAGGATA+TGG | - | chr4_4:79122034-79122053 | Msa0706170:intron | 35.0% |
| CTTTCACCATATCCTGAAAA+AGG | + | chr4_4:79122043-79122062 | None:intergenic | 35.0% | |
| ATAATATCCTCTCTTTGCCA+TGG | - | chr4_4:79122466-79122485 | Msa0706170:intron | 35.0% | |
| TAAAATTCCATGGCAAAGAG+AGG | + | chr4_4:79122476-79122495 | None:intergenic | 35.0% | |
| TGGAAAGAAGAGTAGAAAGA+GGG | - | chr4_4:79122542-79122561 | Msa0706170:intron | 35.0% | |
| CCTCGTTTGACATTGTATAA+TGG | + | chr4_4:79122640-79122659 | None:intergenic | 35.0% | |
| CCATTATACAATGTCAAACG+AGG | - | chr4_4:79122637-79122656 | Msa0706170:intron | 35.0% | |
| ! | TTTTTCCCCATCAATCTTCT+TGG | - | chr4_4:79122683-79122702 | Msa0706170:intron | 35.0% |
| GAAAACCAAGAAGATTGATG+GGG | + | chr4_4:79122691-79122710 | None:intergenic | 35.0% | |
| CAGAAAACCAAGAAGATTGA+TGG | + | chr4_4:79122693-79122712 | None:intergenic | 35.0% | |
| GACTTTCTTTACAATGTGTC+AGG | - | chr4_4:79123053-79123072 | Msa0706170:CDS | 35.0% | |
| ATATAGTTACTGTTGTTGGC+GGG | - | chr4_4:79123165-79123184 | Msa0706170:intron | 35.0% | |
| CATTGGAGATGAATTGTGTT+GGG | + | chr4_4:79123203-79123222 | None:intergenic | 35.0% | |
| ACATTGGAGATGAATTGTGT+TGG | + | chr4_4:79123204-79123223 | None:intergenic | 35.0% | |
| ! | ATACCGGTCTTAAAGTATCT+GGG | + | chr4_4:79123552-79123571 | None:intergenic | 35.0% |
| CTGTACTAAATAGCGTATCT+TGG | + | chr4_4:79123715-79123734 | None:intergenic | 35.0% | |
| CACTATATCAGGAATTCCTT+TGG | - | chr4_4:79123972-79123991 | Msa0706170:intron | 35.0% | |
| ! | GTTCATGCAGATTCTTTTCA+TGG | + | chr4_4:79124002-79124021 | None:intergenic | 35.0% |
| CAAACTTGTCTTTCATGTGA+TGG | - | chr4_4:79124215-79124234 | Msa0706170:intron | 35.0% | |
| GTTAAAACATCTCACCCAAA+AGG | + | chr4_4:79124290-79124309 | None:intergenic | 35.0% | |
| TCAGCAAGCTAATGCAAAAT+AGG | + | chr4_4:79124467-79124486 | None:intergenic | 35.0% | |
| ACTGAATCATTGTGCTAAAG+TGG | - | chr4_4:79124707-79124726 | Msa0706170:intron | 35.0% | |
| TTGGGCCTATTAAAACATCT+AGG | + | chr4_4:79124738-79124757 | None:intergenic | 35.0% | |
| GTAATGTGATACATACCTGT+AGG | - | chr4_4:79124792-79124811 | Msa0706170:intron | 35.0% | |
| AAAGTACATCAACCAGTATG+CGG | + | chr4_4:79124940-79124959 | None:intergenic | 35.0% | |
| TGAACATTCAAAGGTTGGAA+TGG | + | chr4_4:79125015-79125034 | None:intergenic | 35.0% | |
| CAGTGATTGTTATCAGAAGT+TGG | - | chr4_4:79125051-79125070 | Msa0706170:intron | 35.0% | |
| ! | GTTTAAGGTACTTACGTGTT+TGG | + | chr4_4:79125113-79125132 | None:intergenic | 35.0% |
| ! | AGGAACTGGAATTAGTTTCT+TGG | + | chr4_4:79125265-79125284 | None:intergenic | 35.0% |
| AAGAAACTAATTCCAGTTCC+TGG | - | chr4_4:79125264-79125283 | Msa0706170:intron | 35.0% | |
| ! | TTTTCAACTGCTATGAATCC+AGG | + | chr4_4:79125679-79125698 | None:intergenic | 35.0% |
| GAAAGAATCTTCTGTCTCTG+CGG | + | chr4_4:79119065-79119084 | None:intergenic | 40.0% | |
| CAAACCCTCAGATGAAATCT+GGG | - | chr4_4:79119157-79119176 | Msa0706170:CDS | 40.0% | |
| TTTGCCCAGATTTCATCTGA+GGG | + | chr4_4:79119164-79119183 | None:intergenic | 40.0% | |
| CAATTCATGTTAGGTTCCAC+TGG | - | chr4_4:79119405-79119424 | Msa0706170:intron | 40.0% | |
| TATTGTGTCTGTACACCTGA+TGG | - | chr4_4:79119559-79119578 | Msa0706170:intron | 40.0% | |
| ATTGCTGTGTACTAACTACC+AGG | - | chr4_4:79119604-79119623 | Msa0706170:intron | 40.0% | |
| TTGCTGTGTACTAACTACCA+GGG | - | chr4_4:79119605-79119624 | Msa0706170:intron | 40.0% | |
| CGTCTCCATTCTTGATATTG+CGG | - | chr4_4:79119657-79119676 | Msa0706170:intron | 40.0% | |
| AACCATGATTGAAGCTGCAT+CGG | + | chr4_4:79119703-79119722 | None:intergenic | 40.0% | |
| ! | GGTTTGTCATCCCATTTTAG+AGG | - | chr4_4:79119906-79119925 | Msa0706170:intron | 40.0% |
| GATACCCTGATGTTGAGATA+AGG | - | chr4_4:79120036-79120055 | Msa0706170:CDS | 40.0% | |
| CTGACCTTATCTCAACATCA+GGG | + | chr4_4:79120043-79120062 | None:intergenic | 40.0% | |
| TCTGACCTTATCTCAACATC+AGG | + | chr4_4:79120044-79120063 | None:intergenic | 40.0% | |
| TGATCTATGTTCTGCCACAT+TGG | - | chr4_4:79120139-79120158 | Msa0706170:intron | 40.0% | |
| CTGCCACATTGGAAAATAAG+AGG | - | chr4_4:79120150-79120169 | Msa0706170:intron | 40.0% | |
| GAACGATATGTGACGAACAA+TGG | + | chr4_4:79120354-79120373 | None:intergenic | 40.0% | |
| ! | GTTCCATGCTGTTTGTTAGT+AGG | - | chr4_4:79120397-79120416 | Msa0706170:intron | 40.0% |
| GTTCCTACTAACAAACAGCA+TGG | + | chr4_4:79120403-79120422 | None:intergenic | 40.0% | |
| ! | TGAAAGTATACGTCTCTGCA+AGG | - | chr4_4:79120517-79120536 | Msa0706170:CDS | 40.0% |
| AGGTGACACTGTTGTTATCA+AGG | - | chr4_4:79120669-79120688 | Msa0706170:intron | 40.0% | |
| GACACTGTTGTTATCAAGGA+TGG | - | chr4_4:79120673-79120692 | Msa0706170:intron | 40.0% | |
| GATGGAAGTGAAATTATCCC+AGG | - | chr4_4:79120691-79120710 | Msa0706170:CDS | 40.0% | |
| ! | GGTTCTAACCTTCTTTAGCA+GGG | + | chr4_4:79120717-79120736 | None:intergenic | 40.0% |
| ! | AGGTTCTAACCTTCTTTAGC+AGG | + | chr4_4:79120718-79120737 | None:intergenic | 40.0% |
| TTGAGGCAAGTAATTCTCAC+TGG | + | chr4_4:79120972-79120991 | None:intergenic | 40.0% | |
| GATCGACATCTACACATATC+TGG | + | chr4_4:79121361-79121380 | None:intergenic | 40.0% | |
| ! | CTCCATGCCTTCATAACTTT+TGG | - | chr4_4:79121432-79121451 | Msa0706170:CDS | 40.0% |
| GTCATGTGACATTACAGCAA+TGG | - | chr4_4:79121530-79121549 | Msa0706170:intron | 40.0% | |
| CATAAAATGTACCTCCGCAA+TGG | + | chr4_4:79121663-79121682 | None:intergenic | 40.0% | |
| TAAAGCATAGCATGTAGGCA+TGG | - | chr4_4:79121748-79121767 | Msa0706170:intron | 40.0% | |
| CTCCCATAACTATGAACAAG+AGG | + | chr4_4:79121825-79121844 | None:intergenic | 40.0% | |
| TAGACACGTATGCATCAGTA+CGG | - | chr4_4:79122105-79122124 | Msa0706170:CDS | 40.0% | |
| AAATTGCACAACACAGAAGC+AGG | + | chr4_4:79122368-79122387 | None:intergenic | 40.0% | |
| CTGGAAAGAAGAGTAGAAAG+AGG | - | chr4_4:79122541-79122560 | Msa0706170:intron | 40.0% | |
| ! | ATTTTGAGCTGAATGGTGCT+TGG | - | chr4_4:79122873-79122892 | Msa0706170:intron | 40.0% |
| CATCTCCAATGTCAAGAATG+TGG | - | chr4_4:79123212-79123231 | Msa0706170:intron | 40.0% | |
| TTCCTCCACATTCTTGACAT+TGG | + | chr4_4:79123220-79123239 | None:intergenic | 40.0% | |
| ! | GGATGTGATAGACCTTTTTG+CGG | - | chr4_4:79123472-79123491 | Msa0706170:CDS | 40.0% |
| ! | AAAGTATCTGGGGAACAAAC+AGG | + | chr4_4:79123541-79123560 | None:intergenic | 40.0% |
| !! | TTCCCCAGATACTTTAAGAC+CGG | - | chr4_4:79123546-79123565 | Msa0706170:intron | 40.0% |
| ! | TACCGGTCTTAAAGTATCTG+GGG | + | chr4_4:79123551-79123570 | None:intergenic | 40.0% |
| ! | CATACCGGTCTTAAAGTATC+TGG | + | chr4_4:79123553-79123572 | None:intergenic | 40.0% |
| !! | CAGATACTTTAAGACCGGTA+TGG | - | chr4_4:79123551-79123570 | Msa0706170:intron | 40.0% |
| TGTGTAGTTATTGTGCCCTT+GGG | - | chr4_4:79123826-79123845 | Msa0706170:intron | 40.0% | |
| TGATGAAATTGACCACCCAA+GGG | + | chr4_4:79123844-79123863 | None:intergenic | 40.0% | |
| ATGATGAAATTGACCACCCA+AGG | + | chr4_4:79123845-79123864 | None:intergenic | 40.0% | |
| TTCTCTTCCTAGGGAGTTAA+AGG | - | chr4_4:79123891-79123910 | Msa0706170:intron | 40.0% | |
| TTCAAAGCCTTTAACTCCCT+AGG | + | chr4_4:79123901-79123920 | None:intergenic | 40.0% | |
| !! | TTCTTTTCATGGGCTACCAA+AGG | + | chr4_4:79123991-79124010 | None:intergenic | 40.0% |
| GACATATTAACACCGCATAC+TGG | - | chr4_4:79124925-79124944 | Msa0706170:intron | 40.0% | |
| ATTCCACACTGTACTAGAGT+TGG | + | chr4_4:79124979-79124998 | None:intergenic | 40.0% | |
| !! | TGGTGTCATTTCTCTTGTAC+TGG | - | chr4_4:79125071-79125090 | Msa0706170:intron | 40.0% |
| ACAAGAGAAGATTGCTGGTA+TGG | - | chr4_4:79125444-79125463 | Msa0706170:intron | 40.0% | |
| CCAGATTTCATCTGAGGGTT+TGG | + | chr4_4:79119159-79119178 | None:intergenic | 45.0% | |
| CCAAACCCTCAGATGAAATC+TGG | - | chr4_4:79119156-79119175 | Msa0706170:CDS | 45.0% | |
| CTTTGCCCAGATTTCATCTG+AGG | + | chr4_4:79119165-79119184 | None:intergenic | 45.0% | |
| GATGAAATCTGGGCAAAGCT+TGG | - | chr4_4:79119167-79119186 | Msa0706170:CDS | 45.0% | |
| ! | ACACCTGATGGTGAATCATG+AGG | - | chr4_4:79119571-79119590 | Msa0706170:intron | 45.0% |
| CATCCTCATGATTCACCATC+AGG | + | chr4_4:79119577-79119596 | None:intergenic | 45.0% | |
| AACCGATGCAGCTTCAATCA+TGG | - | chr4_4:79119698-79119717 | Msa0706170:intron | 45.0% | |
| ! | GATTTAGAGGCGCGACATAA+CGG | + | chr4_4:79119745-79119764 | None:intergenic | 45.0% |
| TATGTCGCGCCTCTAAATCA+CGG | - | chr4_4:79119746-79119765 | Msa0706170:intron | 45.0% | |
| CTTCCCCTTGAAAACAAGTG+TGG | - | chr4_4:79119835-79119854 | Msa0706170:intron | 45.0% | |
| ACGAAAAATAGCGCGGTAGT+TGG | - | chr4_4:79120859-79120878 | Msa0706170:intron | 45.0% | |
| !! | AGTTGGTAAGCGTGTTTCCT+TGG | - | chr4_4:79120876-79120895 | Msa0706170:intron | 45.0% |
| GTTTCCTTGGTCTGTAACGT+TGG | - | chr4_4:79120889-79120908 | Msa0706170:intron | 45.0% | |
| TATGCCAACGTTACAGACCA+AGG | + | chr4_4:79120896-79120915 | None:intergenic | 45.0% | |
| ! | TTTCTGGGCTAGACACGATT+TGG | + | chr4_4:79121228-79121247 | None:intergenic | 45.0% |
| GTTGCTTCTCAGAGTGGTTA+CGG | - | chr4_4:79121552-79121571 | Msa0706170:intron | 45.0% | |
| TGAACAACTGCTCTGCATTG+AGG | + | chr4_4:79121611-79121630 | None:intergenic | 45.0% | |
| TCACTTTCTGCGTACCATTG+CGG | - | chr4_4:79121646-79121665 | Msa0706170:intron | 45.0% | |
| TTCATCGTGTGAGCGTCTTA+GGG | + | chr4_4:79122075-79122094 | None:intergenic | 45.0% | |
| CACTGTTAGGTCATTGGATC+TGG | - | chr4_4:79122522-79122541 | Msa0706170:intron | 45.0% | |
| AGAAGAGTAGAAAGAGGGAG+AGG | - | chr4_4:79122547-79122566 | Msa0706170:intron | 45.0% | |
| GAAGAGTAGAAAGAGGGAGA+GGG | - | chr4_4:79122548-79122567 | Msa0706170:intron | 45.0% | |
| CTCCAATGTCAAGAATGTGG+AGG | - | chr4_4:79123215-79123234 | Msa0706170:intron | 45.0% | |
| CACAGCAGTGTTGTCAATTG+CGG | + | chr4_4:79123810-79123829 | None:intergenic | 45.0% | |
| CTGTGTAGTTATTGTGCCCT+TGG | - | chr4_4:79123825-79123844 | Msa0706170:intron | 45.0% | |
| GTTGCATAAGACAAATGGGG+AGG | - | chr4_4:79124128-79124147 | Msa0706170:intron | 45.0% | |
| TGCAGGATGTCATATCAGAG+TGG | - | chr4_4:79124155-79124174 | Msa0706170:intron | 45.0% | |
| TCTTCTCTTGTCGATGCTTC+TGG | + | chr4_4:79125435-79125454 | None:intergenic | 45.0% | |
| CATCGACAAGAGAAGATTGC+TGG | - | chr4_4:79125439-79125458 | Msa0706170:intron | 45.0% | |
| GCTGGTATGGATATGCATGT+CGG | - | chr4_4:79125457-79125476 | Msa0706170:intron | 45.0% | |
| TACGAGCATGCTCTTCACTA+CGG | + | chr4_4:79125491-79125510 | None:intergenic | 45.0% | |
| ! | GTGAAGAGCATGCTCGTAAA+AGG | - | chr4_4:79125493-79125512 | Msa0706170:intron | 45.0% |
| !!! | AAAAAATAAATACTTTTTTT+GGG | + | chr4_4:79120584-79120603 | None:intergenic | 5.0% |
| CTTCTGTCTCTGCGGTTGAA+GGG | + | chr4_4:79119057-79119076 | None:intergenic | 50.0% | |
| TCTTCTGTCTCTGCGGTTGA+AGG | + | chr4_4:79119058-79119077 | None:intergenic | 50.0% | |
| TTCATCTGAGGGTTTGGCTG+AGG | + | chr4_4:79119153-79119172 | None:intergenic | 50.0% | |
| ! | AATACTTGTTGACGGGGCTG+AGG | - | chr4_4:79120639-79120658 | Msa0706170:intron | 50.0% |
| AACCTTCTTTAGCAGGGCCT+GGG | + | chr4_4:79120711-79120730 | None:intergenic | 50.0% | |
| TAACCTTCTTTAGCAGGGCC+TGG | + | chr4_4:79120712-79120731 | None:intergenic | 50.0% | |
| TCCTGGGACGAAAAATAGCG+CGG | - | chr4_4:79120852-79120871 | Msa0706170:intron | 50.0% | |
| GCAATGGTTGCTTCTCAGAG+TGG | - | chr4_4:79121546-79121565 | Msa0706170:intron | 50.0% | |
| CTTCATCGTGTGAGCGTCTT+AGG | + | chr4_4:79122076-79122095 | None:intergenic | 50.0% | |
| GATCATCACTGTTCGCAGTG+TGG | - | chr4_4:79122606-79122625 | Msa0706170:CDS | 50.0% | |
| !! | AATGGCATTTCTGGCCCGAT+AGG | + | chr4_4:79122932-79122951 | None:intergenic | 50.0% |
| AGGAACACCAAGACCAGTAC+GGG | + | chr4_4:79123252-79123271 | None:intergenic | 50.0% | |
| GAGGAACACCAAGACCAGTA+CGG | + | chr4_4:79123253-79123272 | None:intergenic | 50.0% | |
| ! | GACCTTTTTGCGGAGCATAC+TGG | - | chr4_4:79123482-79123501 | Msa0706170:intron | 50.0% |
| CTCCAGTATGCTCCGCAAAA+AGG | + | chr4_4:79123487-79123506 | None:intergenic | 50.0% | |
| ! | GAGCATACTGGAGTGCTCTT+GGG | - | chr4_4:79123494-79123513 | Msa0706170:intron | 50.0% |
| ! | AGCATACTGGAGTGCTCTTG+GGG | - | chr4_4:79123495-79123514 | Msa0706170:intron | 50.0% |
| GTAGTTATTGTGCCCTTGGG+TGG | - | chr4_4:79123829-79123848 | Msa0706170:intron | 50.0% | |
| ACAAATGGGGAGGACATTGC+AGG | - | chr4_4:79124138-79124157 | Msa0706170:intron | 50.0% | |
| ACGCAGAGATGATGACTGCT+GGG | - | chr4_4:79124659-79124678 | Msa0706170:CDS | 50.0% | |
| CCACACTGTACTAGAGTTGG+TGG | + | chr4_4:79124976-79124995 | None:intergenic | 50.0% | |
| CCACCAACTCTAGTACAGTG+TGG | - | chr4_4:79124973-79124992 | Msa0706170:intron | 50.0% | |
| TCTCTTGTCGATGCTTCTGG+TGG | + | chr4_4:79125432-79125451 | None:intergenic | 50.0% | |
| TACATCAGGAATGGGAGCCT+CGG | + | chr4_4:79125539-79125558 | None:intergenic | 50.0% | |
| AGGAGGAGGAGTCGAGTACA+AGG | - | chr4_4:79118931-79118950 | Msa0706170:three_prime_UTR | 55.0% | |
| AGACCGCAGCCGTGATTTAG+AGG | + | chr4_4:79119758-79119777 | None:intergenic | 55.0% | |
| ATCCCAGGCCCTGCTAAAGA+AGG | - | chr4_4:79120706-79120725 | Msa0706170:CDS | 55.0% | |
| !!! | ACCGCGCTATTTTTCGTCCC+AGG | + | chr4_4:79120856-79120875 | None:intergenic | 55.0% |
| AACCTGCCAGACGCTGCTAA+AGG | - | chr4_4:79121246-79121265 | Msa0706170:intron | 55.0% | |
| AACCTTTAGCAGCGTCTGGC+AGG | + | chr4_4:79121251-79121270 | None:intergenic | 55.0% | |
| TGCCAGACGCTGCTAAAGGT+TGG | - | chr4_4:79121250-79121269 | Msa0706170:intron | 55.0% | |
| TGCCAACCTTTAGCAGCGTC+TGG | + | chr4_4:79121255-79121274 | None:intergenic | 55.0% | |
| AGAGTGGTTACGGAGATCGC+AGG | - | chr4_4:79121562-79121581 | Msa0706170:intron | 55.0% | |
| CTTTCTGCGTACCATTGCGG+AGG | - | chr4_4:79121649-79121668 | Msa0706170:intron | 55.0% | |
| GGAGAGGGCCAACACAACAA+TGG | - | chr4_4:79122563-79122582 | Msa0706170:intron | 55.0% | |
| GGAATGATGCCTTCCCGTAC+TGG | - | chr4_4:79123236-79123255 | Msa0706170:intron | 55.0% | |
| ! | ATGCCTTCCCGTACTGGTCT+TGG | - | chr4_4:79123242-79123261 | Msa0706170:intron | 55.0% |
| ACACCAAGACCAGTACGGGA+AGG | + | chr4_4:79123248-79123267 | None:intergenic | 55.0% | |
| ! | GGAGCATACTGGAGTGCTCT+TGG | - | chr4_4:79123493-79123512 | Msa0706170:intron | 55.0% |
| ! | TGGAGTGCTCTTGGGGTAAC+TGG | - | chr4_4:79123502-79123521 | Msa0706170:intron | 55.0% |
| ! | GGAGTGCTCTTGGGGTAACT+GGG | - | chr4_4:79123503-79123522 | Msa0706170:intron | 55.0% |
| CACGCAGAGATGATGACTGC+TGG | - | chr4_4:79124658-79124677 | Msa0706170:CDS | 55.0% | |
| CTGCTGGGACTCTTGTATGC+AGG | - | chr4_4:79124674-79124693 | Msa0706170:intron | 55.0% | |
| ! | GTTCAGCGGATTCCAGGAAC+TGG | + | chr4_4:79125279-79125298 | None:intergenic | 55.0% |
| ! | CAGTTCGTTCAGCGGATTCC+AGG | + | chr4_4:79125285-79125304 | None:intergenic | 55.0% |
| ACATCAGGAATGGGAGCCTC+GGG | + | chr4_4:79125538-79125557 | None:intergenic | 55.0% | |
| GTTTGCTTGGCATCGTTGCC+TGG | - | chr4_4:79125658-79125677 | Msa0706170:five_prime_UTR | 55.0% | |
| TTTGGCTGAGGCTGAGGCTG+AGG | + | chr4_4:79119141-79119160 | None:intergenic | 60.0% | |
| TGAGGGTTTGGCTGAGGCTG+AGG | + | chr4_4:79119147-79119166 | None:intergenic | 60.0% | |
| GCGCCTCTAAATCACGGCTG+CGG | - | chr4_4:79119752-79119771 | Msa0706170:intron | 60.0% | |
| CTTGTTGACGGGGCTGAGGT+AGG | - | chr4_4:79120643-79120662 | Msa0706170:intron | 60.0% | |
| GCAGCGTCTGGCAGGTTTCT+GGG | + | chr4_4:79121243-79121262 | None:intergenic | 60.0% | |
| AGCAGCGTCTGGCAGGTTTC+TGG | + | chr4_4:79121244-79121263 | None:intergenic | 60.0% | |
| GCTCTTGGGGTAACTGGGAG+TGG | - | chr4_4:79123508-79123527 | Msa0706170:intron | 60.0% | |
| CATGTTTGCCGTCCAACCCG+AGG | - | chr4_4:79125519-79125538 | Msa0706170:CDS | 60.0% | |
| !! | AATGGGAGCCTCGGGTTGGA+CGG | + | chr4_4:79125530-79125549 | None:intergenic | 60.0% |
| TGAGGCTGAGGCTGAGGCTG+AGG | + | chr4_4:79119129-79119148 | None:intergenic | 65.0% | |
| TGAGGCTGAGGCTGAGGCTG+AGG | + | chr4_4:79119129-79119148 | None:intergenic | 65.0% | |
| GACGGGGCTGAGGTAGGCAA+AGG | - | chr4_4:79120649-79120668 | Msa0706170:intron | 65.0% | |
| CAGGAATGGGAGCCTCGGGT+TGG | + | chr4_4:79125534-79125553 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 79118920 | 79125782 | 79118920 | ID=Msa0706170;Name=Msa0706170 |
| chr4_4 | mRNA | 79118920 | 79125782 | 79118920 | ID=Msa0706170-mRNA-1;Parent=Msa0706170;Name=Msa0706170-mRNA-1;_AED=0.22;_eAED=0.22;_QI=181|0.84|0.92|1|1|1|14|228|459 |
| chr4_4 | exon | 79118920 | 79119279 | 79118920 | ID=Msa0706170-mRNA-1:exon:25429;Parent=Msa0706170-mRNA-1 |
| chr4_4 | exon | 79120007 | 79120067 | 79120007 | ID=Msa0706170-mRNA-1:exon:25428;Parent=Msa0706170-mRNA-1 |
| chr4_4 | exon | 79120472 | 79120584 | 79120472 | ID=Msa0706170-mRNA-1:exon:25427;Parent=Msa0706170-mRNA-1 |
| chr4_4 | exon | 79120676 | 79120741 | 79120676 | ID=Msa0706170-mRNA-1:exon:25426;Parent=Msa0706170-mRNA-1 |
| chr4_4 | exon | 79121135 | 79121235 | 79121135 | ID=Msa0706170-mRNA-1:exon:25425;Parent=Msa0706170-mRNA-1 |
| chr4_4 | exon | 79121424 | 79121531 | 79121424 | ID=Msa0706170-mRNA-1:exon:25424;Parent=Msa0706170-mRNA-1 |
| chr4_4 | exon | 79122075 | 79122171 | 79122075 | ID=Msa0706170-mRNA-1:exon:25423;Parent=Msa0706170-mRNA-1 |
| chr4_4 | exon | 79122566 | 79122652 | 79122566 | ID=Msa0706170-mRNA-1:exon:25422;Parent=Msa0706170-mRNA-1 |
| chr4_4 | exon | 79123032 | 79123155 | 79123032 | ID=Msa0706170-mRNA-1:exon:25421;Parent=Msa0706170-mRNA-1 |
| chr4_4 | exon | 79123249 | 79123340 | 79123249 | ID=Msa0706170-mRNA-1:exon:25420;Parent=Msa0706170-mRNA-1 |
| chr4_4 | exon | 79123435 | 79123496 | 79123435 | ID=Msa0706170-mRNA-1:exon:25419;Parent=Msa0706170-mRNA-1 |
| chr4_4 | exon | 79123975 | 79124072 | 79123975 | ID=Msa0706170-mRNA-1:exon:25418;Parent=Msa0706170-mRNA-1 |
| chr4_4 | exon | 79124531 | 79124681 | 79124531 | ID=Msa0706170-mRNA-1:exon:25417;Parent=Msa0706170-mRNA-1 |
| chr4_4 | exon | 79125514 | 79125782 | 79125514 | ID=Msa0706170-mRNA-1:exon:25416;Parent=Msa0706170-mRNA-1 |
| chr4_4 | five_prime_UTR | 79125602 | 79125782 | 79125602 | ID=Msa0706170-mRNA-1:five_prime_utr;Parent=Msa0706170-mRNA-1 |
| chr4_4 | CDS | 79125514 | 79125601 | 79125514 | ID=Msa0706170-mRNA-1:cds;Parent=Msa0706170-mRNA-1 |
| chr4_4 | CDS | 79124531 | 79124681 | 79124531 | ID=Msa0706170-mRNA-1:cds;Parent=Msa0706170-mRNA-1 |
| chr4_4 | CDS | 79123975 | 79124072 | 79123975 | ID=Msa0706170-mRNA-1:cds;Parent=Msa0706170-mRNA-1 |
| chr4_4 | CDS | 79123435 | 79123496 | 79123435 | ID=Msa0706170-mRNA-1:cds;Parent=Msa0706170-mRNA-1 |
| chr4_4 | CDS | 79123249 | 79123340 | 79123249 | ID=Msa0706170-mRNA-1:cds;Parent=Msa0706170-mRNA-1 |
| chr4_4 | CDS | 79123032 | 79123155 | 79123032 | ID=Msa0706170-mRNA-1:cds;Parent=Msa0706170-mRNA-1 |
| chr4_4 | CDS | 79122566 | 79122652 | 79122566 | ID=Msa0706170-mRNA-1:cds;Parent=Msa0706170-mRNA-1 |
| chr4_4 | CDS | 79122075 | 79122171 | 79122075 | ID=Msa0706170-mRNA-1:cds;Parent=Msa0706170-mRNA-1 |
| chr4_4 | CDS | 79121424 | 79121531 | 79121424 | ID=Msa0706170-mRNA-1:cds;Parent=Msa0706170-mRNA-1 |
| chr4_4 | CDS | 79121135 | 79121235 | 79121135 | ID=Msa0706170-mRNA-1:cds;Parent=Msa0706170-mRNA-1 |
| chr4_4 | CDS | 79120676 | 79120741 | 79120676 | ID=Msa0706170-mRNA-1:cds;Parent=Msa0706170-mRNA-1 |
| chr4_4 | CDS | 79120472 | 79120584 | 79120472 | ID=Msa0706170-mRNA-1:cds;Parent=Msa0706170-mRNA-1 |
| chr4_4 | CDS | 79120007 | 79120067 | 79120007 | ID=Msa0706170-mRNA-1:cds;Parent=Msa0706170-mRNA-1 |
| chr4_4 | CDS | 79119148 | 79119279 | 79119148 | ID=Msa0706170-mRNA-1:cds;Parent=Msa0706170-mRNA-1 |
| chr4_4 | three_prime_UTR | 79118920 | 79119147 | 79118920 | ID=Msa0706170-mRNA-1:three_prime_utr;Parent=Msa0706170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
