AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0706660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0706660 MtrunA17_Chr8g0385961 99.038 312 3 0 1 312 1 312 0.0 651
Msa0706660 MtrunA17_Chr1g0156031 49.425 348 129 11 3 312 2 340 1.27e-105 311
Msa0706660 MtrunA17_Chr6g0479911 52.336 107 51 0 206 312 183 289 5.57e-43 149
Msa0706660 MtrunA17_Chr8g0375531 53.846 104 48 0 209 312 177 280 1.35e-39 140
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0706660 AT2G21240.1 58.280 314 111 5 1 312 1 296 3.48e-127 365
Msa0706660 AT2G21240.2 58.280 314 111 5 1 312 1 296 3.48e-127 365
Msa0706660 AT4G38910.2 54.808 312 112 6 1 312 1 283 2.60e-114 332
Msa0706660 AT4G38910.1 56.228 281 96 5 33 312 4 258 4.44e-104 305
Msa0706660 AT5G42520.2 47.899 357 122 11 1 312 1 338 5.63e-91 275
Msa0706660 AT5G42520.1 47.899 357 126 12 1 312 1 342 8.11e-91 274
Msa0706660 AT5G42520.3 49.291 282 98 8 76 312 1 282 2.03e-77 238
Msa0706660 AT2G35550.2 45.806 155 77 1 165 312 72 226 4.90e-46 155
Msa0706660 AT2G35550.4 45.806 155 77 1 165 312 72 226 4.90e-46 155
Msa0706660 AT2G35550.3 45.806 155 77 1 165 312 72 226 4.90e-46 155
Msa0706660 AT2G35550.1 45.806 155 77 1 165 312 117 271 7.49e-46 156
Msa0706660 AT1G14685.1 52.137 117 56 0 196 312 163 279 4.08e-44 152
Msa0706660 AT1G14685.4 52.137 117 56 0 196 312 163 279 4.08e-44 152
Msa0706660 AT1G14685.3 52.137 117 56 0 196 312 163 279 4.08e-44 152
Msa0706660 AT1G14685.2 52.137 117 56 0 196 312 163 279 4.08e-44 152
Msa0706660 AT1G68120.1 55.769 104 46 0 209 312 166 269 1.20e-41 145
Msa0706660 AT2G01930.2 41.830 153 83 1 166 312 131 283 3.85e-41 144
Msa0706660 AT2G01930.1 41.830 153 83 1 166 312 131 283 3.85e-41 144

Find 115 sgRNAs with CRISPR-Local

Find 618 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGTTTATTTCTAGTTAC+TGG 0.160666 4_4:+79676426 Msa0706660:three_prime_UTR
ACCTACCAAAATAAAGAAAA+TGG 0.208626 4_4:+79675872 Msa0706660:CDS
CTTCTGTCATGTTGGATATA+TGG 0.216505 4_4:-79675731 None:intergenic
ATCTATACCATTGGATCTTA+AGG 0.242442 4_4:+79676214 Msa0706660:CDS
TTACAGCAATCGCATTTAAA+AGG 0.255052 4_4:-79676471 None:intergenic
TCAGAAGTTATAACAGTAAC+TGG 0.272157 4_4:-79675795 None:intergenic
CATTGGATCTTAAGGATTAC+TGG 0.283657 4_4:+79676222 Msa0706660:CDS
GATTAGTAATGTACAGAAAA+AGG 0.297885 4_4:-79676558 None:intergenic
TTTGTTCCTTTATTTGATGC+TGG 0.301136 4_4:-79675428 None:intergenic
TGGTGATAGGCGGTCTAAAA+AGG 0.310805 4_4:-79676318 None:intergenic
TTGCAACAGATGCGGTAAAT+TGG 0.345909 4_4:-79675210 None:intergenic
ACTCCAGTACACGTGCAAAC+TGG 0.357093 4_4:-79676008 None:intergenic
TTGTTCCTTTATTTGATGCT+GGG 0.361945 4_4:-79675427 None:intergenic
AAATGGGCGAGGATTTAAAT+AGG 0.362648 4_4:+79675889 Msa0706660:CDS
TCTACATTTATAAAATTCAA+TGG 0.388885 4_4:+79676624 Msa0706660:three_prime_UTR
CTACATTTATAAAATTCAAT+GGG 0.390303 4_4:+79676625 Msa0706660:three_prime_UTR
GTAACGATTTGTTCCATGTC+TGG 0.409057 4_4:-79676246 None:intergenic
GTCCCAGTTTGCACGTGTAC+TGG 0.410401 4_4:+79676005 Msa0706660:CDS
TCATCTAACTAAGAGAATAA+AGG 0.412472 4_4:+79675830 Msa0706660:CDS
CGTTGAATTCCACCATTGAA+TGG 0.413813 4_4:-79675678 None:intergenic
CAGTACTATTCCGACTTTGA+AGG 0.424329 4_4:-79675647 None:intergenic
ATGCGAGCATGGCGCTTGTT+CGG 0.428637 4_4:-79676119 None:intergenic
TGCCTGCCTTTCAGCCATAA+TGG 0.435049 4_4:-79675481 None:intergenic
ACCACGACAGTGCTACAAAT+GGG 0.437083 4_4:+79676031 Msa0706660:CDS
AAGCGCCATGCTCGCATTGG+AGG 0.439433 4_4:+79676125 Msa0706660:CDS
GGATCCCCAGCATCAAATAA+AGG 0.448615 4_4:+79675422 Msa0706660:CDS
GGATAATGCTCTACTGGAAC+GGG 0.450868 4_4:+79675608 Msa0706660:CDS
AGTAACTAGAAATAAACAAA+GGG 0.452868 4_4:-79676424 None:intergenic
CTCCAGTACACGTGCAAACT+GGG 0.457013 4_4:-79676007 None:intergenic
ACTGGCAACTTTCCATTCAA+TGG 0.459914 4_4:+79675666 Msa0706660:CDS
ATCTGAAAAGAATGAAGCCC+TGG 0.461756 4_4:+79675536 Msa0706660:CDS
GCATCTGTTGCAAAATCCTC+TGG 0.471306 4_4:+79675220 Msa0706660:five_prime_UTR
GACAAAGATCAAATCTGAAT+GGG 0.471460 4_4:+79675929 Msa0706660:CDS
GTGCTTCATCCCTCTGCCGA+AGG 0.475401 4_4:-79675575 None:intergenic
CAAATCTGAATGGGATAGGC+AGG 0.475987 4_4:+79675938 Msa0706660:CDS
GTCCATTATGGCTGAAAGGC+AGG 0.476045 4_4:+79675479 Msa0706660:CDS
CCATGATTTATCTATACCAT+TGG 0.476445 4_4:+79676205 Msa0706660:CDS
GGACAAAGATCAAATCTGAA+TGG 0.478623 4_4:+79675928 Msa0706660:CDS
TGGATATATGGTTTGAAGAA+TGG 0.483617 4_4:-79675719 None:intergenic
AACAAGCGCCATGCTCGCAT+TGG 0.488361 4_4:+79676122 Msa0706660:CDS
TCCGCCCTCCAATGCGAGCA+TGG 0.489587 4_4:-79676130 None:intergenic
ACTCGAAACAAATGAATGTC+AGG 0.491577 4_4:-79676287 None:intergenic
CCTACCAAAATAAAGAAAAT+GGG 0.492634 4_4:+79675873 Msa0706660:CDS
TGAAGAATGGTGCATCCGCT+TGG 0.493558 4_4:-79675706 None:intergenic
TACCACGACAGTGCTACAAA+TGG 0.496139 4_4:+79676030 Msa0706660:CDS
AATAGGAAGGCTTATTCTGA+AGG 0.504268 4_4:+79675906 Msa0706660:CDS
TGCTTGAGTTTAGCGCATGC+AGG 0.511532 4_4:+79676376 Msa0706660:three_prime_UTR
CTCAGTAGGTTTGCATCAGA+AGG 0.511971 4_4:+79676182 Msa0706660:CDS
TGAAAACGGTAGGCATAAGA+TGG 0.514492 4_4:+79675270 Msa0706660:CDS
AGCGCCATGCTCGCATTGGA+GGG 0.517752 4_4:+79676126 Msa0706660:CDS
TCAGAGGGATAATGCTCTAC+TGG 0.518249 4_4:+79675602 Msa0706660:CDS
GGGCTACGTCTCGAGCAGCC+AGG 0.518686 4_4:-79675554 None:intergenic
CTTCAAAGTCGGAATAGTAC+TGG 0.519466 4_4:+79675648 Msa0706660:CDS
TGTTCCTTTATTTGATGCTG+GGG 0.520374 4_4:-79675426 None:intergenic
AGTACTATTCCGACTTTGAA+GGG 0.520694 4_4:-79675646 None:intergenic
GGATGAAGCACTTGCTCAGA+GGG 0.522036 4_4:+79675587 Msa0706660:CDS
ATATGCTGCTTCTGTCATGT+TGG 0.532878 4_4:-79675739 None:intergenic
AGATCAAATCTGAATGGGAT+AGG 0.533258 4_4:+79675934 Msa0706660:CDS
TTGTTCGGAAGCTGTGGTAG+TGG 0.541295 4_4:-79676104 None:intergenic
CAAAATAAAGAAAATGGGCG+AGG 0.545395 4_4:+79675878 Msa0706660:CDS
GAGACGTAGCCCTTCGGCAG+AGG 0.546456 4_4:+79675565 Msa0706660:CDS
CCAATGGTATAGATAAATCA+TGG 0.547636 4_4:-79676205 None:intergenic
GGCTACGTCTCGAGCAGCCA+GGG 0.552588 4_4:-79675553 None:intergenic
CCCCATTTGTAGCACTGTCG+TGG 0.555932 4_4:-79676032 None:intergenic
ATTGGTCTCAAGAAGTCTTG+AGG 0.556886 4_4:-79675192 None:intergenic
CAGAAGTTATAACAGTAACT+GGG 0.557616 4_4:-79675794 None:intergenic
TTTAAATGTGCAGTGGAATG+TGG 0.558628 4_4:+79675401 Msa0706660:intron
CTGCTCGAGACGTAGCCCTT+CGG 0.563490 4_4:+79675559 Msa0706660:CDS
CTACAGAGGAGCACATTCCC+TGG 0.565304 4_4:+79675297 Msa0706660:CDS
AGACGTAGCCCTTCGGCAGA+GGG 0.565616 4_4:+79675566 Msa0706660:CDS
AGAACTTACAGCTACAGAAA+CGG 0.566961 4_4:-79672654 None:intergenic
ATGACACGGGTGAGGAAGGA+AGG 0.569855 4_4:+79672575 Msa0706660:five_prime_UTR
GGGCGAGGATTTAAATAGGA+AGG 0.570874 4_4:+79675893 Msa0706660:CDS
CTCTTGCAGCCCTTCAAAGT+CGG 0.574408 4_4:+79675637 Msa0706660:CDS
AAGGATTACTGGGCCAGACA+TGG 0.576589 4_4:+79676233 Msa0706660:CDS
GCCATGCTCGCATTGGAGGG+CGG 0.577730 4_4:+79676129 Msa0706660:CDS
TGCTTCATCCCTCTGCCGAA+GGG 0.577861 4_4:-79675574 None:intergenic
CTGTAATCAAAACCATGCCT+TGG 0.580020 4_4:+79676342 Msa0706660:three_prime_UTR
GGGATAATGCTCTACTGGAA+CGG 0.583003 4_4:+79675607 Msa0706660:CDS
AAACATGACACGGGTGAGGA+AGG 0.583722 4_4:+79672571 Msa0706660:five_prime_UTR
GTACACGTGCAAACTGGGAC+AGG 0.585669 4_4:-79676002 None:intergenic
ATAGGAAGGCTTATTCTGAA+GGG 0.587900 4_4:+79675907 Msa0706660:CDS
ATTGGATCTTAAGGATTACT+GGG 0.588784 4_4:+79676223 Msa0706660:CDS
TCTTCTTGAACTTGAACTAG+AGG 0.590105 4_4:+79675506 Msa0706660:CDS
TTAGGTCCATTATGGCTGAA+AGG 0.590519 4_4:+79675475 Msa0706660:CDS
GATGACCGCCAATATGAAAA+CGG 0.592001 4_4:+79675256 Msa0706660:CDS
ATATCTTGCTGACCAAGGCA+TGG 0.593773 4_4:-79676354 None:intergenic
GAATGGGATAGGCAGGATGT+TGG 0.593838 4_4:+79675945 Msa0706660:CDS
CAGTAATCCTTAAGATCCAA+TGG 0.595456 4_4:-79676221 None:intergenic
AAAATCCTCTGGATGCAAGA+TGG 0.605878 4_4:+79675231 Msa0706660:exon
GGCAACTTTCCATTCAATGG+TGG 0.607937 4_4:+79675669 Msa0706660:CDS
TGGCGCTTGTTCGGAAGCTG+TGG 0.609294 4_4:-79676110 None:intergenic
TGATTACAGCTGGTGATAGG+CGG 0.611104 4_4:-79676328 None:intergenic
GGGAAAACATGACACGGGTG+AGG 0.613798 4_4:+79672567 None:intergenic
CCACGACAGTGCTACAAATG+GGG 0.618535 4_4:+79676032 Msa0706660:CDS
ATCGTCCATCTTGCATCCAG+AGG 0.621489 4_4:-79675236 None:intergenic
CAGTAACTAGAAATAAACAA+AGG 0.621529 4_4:-79676425 None:intergenic
CATAAGATGGACTACTACAG+AGG 0.628336 4_4:+79675283 Msa0706660:CDS
CAAGCATATCTTGCTGACCA+AGG 0.631537 4_4:-79676359 None:intergenic
ATTGGAGGGCGGAAAATGAG+CGG 0.633747 4_4:+79676140 Msa0706660:CDS
AACTAGAAATAAACAAAGGG+GGG 0.635667 4_4:-79676421 None:intergenic
TACATTTATAAAATTCAATG+GGG 0.636608 4_4:+79676626 Msa0706660:three_prime_UTR
TAACTAGAAATAAACAAAGG+GGG 0.640263 4_4:-79676422 None:intergenic
CACGACAGTGCTACAAATGG+GGG 0.651085 4_4:+79676033 Msa0706660:CDS
ACCGCCAATATGAAAACGGT+AGG 0.665966 4_4:+79675260 Msa0706660:CDS
GGGATGAAGCACTTGCTCAG+AGG 0.669930 4_4:+79675586 Msa0706660:CDS
AGTTATAACAGTAACTGGGG+AGG 0.670600 4_4:-79675790 None:intergenic
TGGGAAGGGAAAACATGACA+CGG 0.674207 4_4:+79672561 None:intergenic
AGAAGTTATAACAGTAACTG+GGG 0.682187 4_4:-79675793 None:intergenic
GTAACTAGAAATAAACAAAG+GGG 0.686632 4_4:-79676423 None:intergenic
GGGAAGGGAAAACATGACAC+GGG 0.699552 4_4:+79672562 None:intergenic
TGGATGCATTGACAATGTAG+TGG 0.702687 4_4:-79676084 None:intergenic
GAATTCAACGTGGATCCAAG+CGG 0.708406 4_4:+79675691 Msa0706660:CDS
TTCAATGGTGGAATTCAACG+TGG 0.712678 4_4:+79675681 Msa0706660:CDS
AGAAGCAGCATATAGCACGA+CGG 0.752304 4_4:+79675749 Msa0706660:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTTTATTCATAACTA+GGG - chr4_4:79675457-79675476 None:intergenic 10.0%
!!! TAATTTTTTTATTCATAACT+AGG - chr4_4:79675458-79675477 None:intergenic 10.0%
!! TAGTTATGAATAAAAAAATT+AGG + chr4_4:79675457-79675476 Msa0706660:CDS 10.0%
!! TATAAATGTAGAAAAATAAA+GGG - chr4_4:79676616-79676635 None:intergenic 10.0%
!! TTATAAATGTAGAAAAATAA+AGG - chr4_4:79676617-79676636 None:intergenic 10.0%
!!! AATTTTTTTATTCATAACTA+GGG - chr4_4:79675457-79675476 None:intergenic 10.0%
!!! TAATTTTTTTATTCATAACT+AGG - chr4_4:79675458-79675477 None:intergenic 10.0%
!! TAGTTATGAATAAAAAAATT+AGG + chr4_4:79675457-79675476 Msa0706660:CDS 10.0%
!! TATAAATGTAGAAAAATAAA+GGG - chr4_4:79676616-79676635 None:intergenic 10.0%
!! TTATAAATGTAGAAAAATAA+AGG - chr4_4:79676617-79676636 None:intergenic 10.0%
!! GAATAATAAAAATGGTAATT+GGG - chr4_4:79672733-79672752 None:intergenic 15.0%
!! AGAATAATAAAAATGGTAAT+TGG - chr4_4:79672734-79672753 None:intergenic 15.0%
!! TAATTATGAGAATTTACAAT+AGG + chr4_4:79673271-79673290 Msa0706660:intron 15.0%
!! AAAAAAACTATTTAAGGAAA+GGG - chr4_4:79673807-79673826 None:intergenic 15.0%
!! AAAAAAAACTATTTAAGGAA+AGG - chr4_4:79673808-79673827 None:intergenic 15.0%
!! TAATGTTAAAGACATATATA+TGG - chr4_4:79674356-79674375 None:intergenic 15.0%
!! TACAACTAATAAATTAAACT+TGG - chr4_4:79675021-79675040 None:intergenic 15.0%
!! TTTAAAAAATCAATAATCTC+TGG - chr4_4:79675172-79675191 None:intergenic 15.0%
!! TCTACATTTATAAAATTCAA+TGG + chr4_4:79676624-79676643 Msa0706660:three_prime_UTR 15.0%
!! CTACATTTATAAAATTCAAT+GGG + chr4_4:79676625-79676644 Msa0706660:three_prime_UTR 15.0%
!! TACATTTATAAAATTCAATG+GGG + chr4_4:79676626-79676645 Msa0706660:three_prime_UTR 15.0%
!! GAATAATAAAAATGGTAATT+GGG - chr4_4:79672733-79672752 None:intergenic 15.0%
!! AGAATAATAAAAATGGTAAT+TGG - chr4_4:79672734-79672753 None:intergenic 15.0%
!! TAATTATGAGAATTTACAAT+AGG + chr4_4:79673271-79673290 Msa0706660:intron 15.0%
!! AAAAAAACTATTTAAGGAAA+GGG - chr4_4:79673807-79673826 None:intergenic 15.0%
!! AAAAAAAACTATTTAAGGAA+AGG - chr4_4:79673808-79673827 None:intergenic 15.0%
!! TAATGTTAAAGACATATATA+TGG - chr4_4:79674356-79674375 None:intergenic 15.0%
!! TACAACTAATAAATTAAACT+TGG - chr4_4:79675021-79675040 None:intergenic 15.0%
!! TTTAAAAAATCAATAATCTC+TGG - chr4_4:79675172-79675191 None:intergenic 15.0%
!! TCTACATTTATAAAATTCAA+TGG + chr4_4:79676624-79676643 Msa0706660:three_prime_UTR 15.0%
!! CTACATTTATAAAATTCAAT+GGG + chr4_4:79676625-79676644 Msa0706660:three_prime_UTR 15.0%
!! TACATTTATAAAATTCAATG+GGG + chr4_4:79676626-79676645 Msa0706660:three_prime_UTR 15.0%
!! GGTTTAGAGAATAATAAAAA+TGG - chr4_4:79672741-79672760 None:intergenic 20.0%
!! TTTCATTTATTCCTCTTATT+TGG + chr4_4:79673121-79673140 Msa0706660:intron 20.0%
!! AATTAGTCACTGTTAAATTA+CGG + chr4_4:79673226-79673245 Msa0706660:intron 20.0%
!! AAAAAACTTTCAATTCAACA+CGG - chr4_4:79673315-79673334 None:intergenic 20.0%
!! AATATAAGATATGTGTACAA+TGG + chr4_4:79674202-79674221 Msa0706660:intron 20.0%
!!! ATTTCTTTGTTATTGTAGTT+TGG - chr4_4:79674772-79674791 None:intergenic 20.0%
!! ACTACAGTTAAATGAAAAAA+TGG + chr4_4:79674812-79674831 Msa0706660:intron 20.0%
!!! TTGTAAAAAGATTTTCTACA+AGG + chr4_4:79675036-79675055 Msa0706660:intron 20.0%
!! TAAAAAAATTAGGTCCATTA+TGG + chr4_4:79675467-79675486 Msa0706660:CDS 20.0%
!! AGTAACTAGAAATAAACAAA+GGG - chr4_4:79676427-79676446 None:intergenic 20.0%
!! GGTTTAGAGAATAATAAAAA+TGG - chr4_4:79672741-79672760 None:intergenic 20.0%
!! TTTCATTTATTCCTCTTATT+TGG + chr4_4:79673121-79673140 Msa0706660:intron 20.0%
!! AATTAGTCACTGTTAAATTA+CGG + chr4_4:79673226-79673245 Msa0706660:intron 20.0%
!! AAAAAACTTTCAATTCAACA+CGG - chr4_4:79673315-79673334 None:intergenic 20.0%
!! AATATAAGATATGTGTACAA+TGG + chr4_4:79674202-79674221 Msa0706660:intron 20.0%
!!! ATTTCTTTGTTATTGTAGTT+TGG - chr4_4:79674772-79674791 None:intergenic 20.0%
!! ACTACAGTTAAATGAAAAAA+TGG + chr4_4:79674812-79674831 Msa0706660:intron 20.0%
!!! TTGTAAAAAGATTTTCTACA+AGG + chr4_4:79675036-79675055 Msa0706660:intron 20.0%
!! TAAAAAAATTAGGTCCATTA+TGG + chr4_4:79675467-79675486 Msa0706660:CDS 20.0%
!! AGTAACTAGAAATAAACAAA+GGG - chr4_4:79676427-79676446 None:intergenic 20.0%
! ATTACATTACCTAGAAACAA+AGG - chr4_4:79672762-79672781 None:intergenic 25.0%
!! TATTTGTATGTACTGATGAA+TGG + chr4_4:79672983-79673002 Msa0706660:intron 25.0%
! AGAATGATGTGATCAAAATT+TGG + chr4_4:79673082-79673101 Msa0706660:intron 25.0%
!!! GTGTTGAATTGAAAGTTTTT+TGG + chr4_4:79673314-79673333 Msa0706660:intron 25.0%
! TTGACATGAATAACTAGTAT+TGG - chr4_4:79673362-79673381 None:intergenic 25.0%
! AATACTAGTTATTCATGTCA+AGG + chr4_4:79673361-79673380 Msa0706660:intron 25.0%
!!! GATTGATAGTCATATTCTTT+TGG + chr4_4:79673386-79673405 Msa0706660:intron 25.0%
! CATATTAGAATTTGAGCTTA+GGG + chr4_4:79674643-79674662 Msa0706660:intron 25.0%
!! ACTTTACAAGTAGATTTTGT+GGG - chr4_4:79674680-79674699 None:intergenic 25.0%
!! TACTTTACAAGTAGATTTTG+TGG - chr4_4:79674681-79674700 None:intergenic 25.0%
! TCTTATATCAAAAGAAAGAC+CGG - chr4_4:79674939-79674958 None:intergenic 25.0%
! TCATCTAACTAAGAGAATAA+AGG + chr4_4:79675830-79675849 Msa0706660:CDS 25.0%
! ACCTACCAAAATAAAGAAAA+TGG + chr4_4:79675872-79675891 Msa0706660:CDS 25.0%
! CCTACCAAAATAAAGAAAAT+GGG + chr4_4:79675873-79675892 Msa0706660:CDS 25.0%
! TAACTAGAAATAAACAAAGG+GGG - chr4_4:79676425-79676444 None:intergenic 25.0%
! GTAACTAGAAATAAACAAAG+GGG - chr4_4:79676426-79676445 None:intergenic 25.0%
! CAGTAACTAGAAATAAACAA+AGG - chr4_4:79676428-79676447 None:intergenic 25.0%
!!! CTTTGTTTATTTCTAGTTAC+TGG + chr4_4:79676426-79676445 Msa0706660:three_prime_UTR 25.0%
! CGCATTTAAAAGGATAAAAA+TGG - chr4_4:79676464-79676483 None:intergenic 25.0%
!! TTTTCTAGGTGGTTTTTATT+TGG + chr4_4:79676519-79676538 Msa0706660:three_prime_UTR 25.0%
! GATTAGTAATGTACAGAAAA+AGG - chr4_4:79676561-79676580 None:intergenic 25.0%
! ATTACATTACCTAGAAACAA+AGG - chr4_4:79672762-79672781 None:intergenic 25.0%
!! TATTTGTATGTACTGATGAA+TGG + chr4_4:79672983-79673002 Msa0706660:intron 25.0%
! AGAATGATGTGATCAAAATT+TGG + chr4_4:79673082-79673101 Msa0706660:intron 25.0%
!!! GTGTTGAATTGAAAGTTTTT+TGG + chr4_4:79673314-79673333 Msa0706660:intron 25.0%
! TTGACATGAATAACTAGTAT+TGG - chr4_4:79673362-79673381 None:intergenic 25.0%
! AATACTAGTTATTCATGTCA+AGG + chr4_4:79673361-79673380 Msa0706660:intron 25.0%
!!! GATTGATAGTCATATTCTTT+TGG + chr4_4:79673386-79673405 Msa0706660:intron 25.0%
! CATATTAGAATTTGAGCTTA+GGG + chr4_4:79674643-79674662 Msa0706660:intron 25.0%
!! ACTTTACAAGTAGATTTTGT+GGG - chr4_4:79674680-79674699 None:intergenic 25.0%
!! TACTTTACAAGTAGATTTTG+TGG - chr4_4:79674681-79674700 None:intergenic 25.0%
! TCTTATATCAAAAGAAAGAC+CGG - chr4_4:79674939-79674958 None:intergenic 25.0%
! TCATCTAACTAAGAGAATAA+AGG + chr4_4:79675830-79675849 Msa0706660:CDS 25.0%
! ACCTACCAAAATAAAGAAAA+TGG + chr4_4:79675872-79675891 Msa0706660:CDS 25.0%
! CCTACCAAAATAAAGAAAAT+GGG + chr4_4:79675873-79675892 Msa0706660:CDS 25.0%
! TAACTAGAAATAAACAAAGG+GGG - chr4_4:79676425-79676444 None:intergenic 25.0%
! GTAACTAGAAATAAACAAAG+GGG - chr4_4:79676426-79676445 None:intergenic 25.0%
! CAGTAACTAGAAATAAACAA+AGG - chr4_4:79676428-79676447 None:intergenic 25.0%
!!! CTTTGTTTATTTCTAGTTAC+TGG + chr4_4:79676426-79676445 Msa0706660:three_prime_UTR 25.0%
! CGCATTTAAAAGGATAAAAA+TGG - chr4_4:79676464-79676483 None:intergenic 25.0%
!! TTTTCTAGGTGGTTTTTATT+TGG + chr4_4:79676519-79676538 Msa0706660:three_prime_UTR 25.0%
! GATTAGTAATGTACAGAAAA+AGG - chr4_4:79676561-79676580 None:intergenic 25.0%
ATGGTAATTGGGAAAATACA+GGG - chr4_4:79672722-79672741 None:intergenic 30.0%
AATGGTAATTGGGAAAATAC+AGG - chr4_4:79672723-79672742 None:intergenic 30.0%
! TTCTCTAAACCTTTGTTTCT+AGG + chr4_4:79672750-79672769 Msa0706660:intron 30.0%
AGAGAATTAAAGGGGAAAAA+AGG - chr4_4:79672883-79672902 None:intergenic 30.0%
TGGAAAGAGAGAGAATTAAA+GGG - chr4_4:79672892-79672911 None:intergenic 30.0%
ATGGAAAGAGAGAGAATTAA+AGG - chr4_4:79672893-79672912 None:intergenic 30.0%
! GTACATTTGGTGAAACAAAA+TGG - chr4_4:79672912-79672931 None:intergenic 30.0%
!! TTTTGTTTCACCAAATGTAC+AGG + chr4_4:79672912-79672931 Msa0706660:intron 30.0%
TTTGTTTCACCAAATGTACA+GGG + chr4_4:79672913-79672932 Msa0706660:intron 30.0%
GCTTTATGTGTAATAGTGTA+TGG + chr4_4:79673054-79673073 Msa0706660:intron 30.0%
AATTACGGTGGATATTTCAT+AGG + chr4_4:79673241-79673260 Msa0706660:intron 30.0%
ATATGCAATTGAAAGTCGAT+AGG - chr4_4:79673480-79673499 None:intergenic 30.0%
CAATTTATAAGTTGTGTCTC+TGG + chr4_4:79673614-79673633 Msa0706660:intron 30.0%
GTGTATAGCTACATTAAGTA+AGG - chr4_4:79673672-79673691 None:intergenic 30.0%
TACATCAAATAGAACCACAA+GGG - chr4_4:79673730-79673749 None:intergenic 30.0%
TTACATCAAATAGAACCACA+AGG - chr4_4:79673731-79673750 None:intergenic 30.0%
TGTCCAGCTTATATTTGAAA+AGG + chr4_4:79674029-79674048 Msa0706660:intron 30.0%
GTCCAGCTTATATTTGAAAA+GGG + chr4_4:79674030-79674049 Msa0706660:intron 30.0%
TGTATTTGTGTCAAGTTCTA+GGG - chr4_4:79674135-79674154 None:intergenic 30.0%
TTCTAAATACATCACCTACT+GGG - chr4_4:79674173-79674192 None:intergenic 30.0%
GGTGATGTATTTAGAAGATT+TGG + chr4_4:79674177-79674196 Msa0706660:intron 30.0%
TATAGCCTACAAATGTAGTA+AGG + chr4_4:79674296-79674315 Msa0706660:intron 30.0%
AAAGTCCTTACTACATTTGT+AGG - chr4_4:79674304-79674323 None:intergenic 30.0%
! ACTTCACAAATTGATTCTGT+GGG - chr4_4:79674451-79674470 None:intergenic 30.0%
ACAGAATCAATTTGTGAAGT+GGG + chr4_4:79674451-79674470 Msa0706660:intron 30.0%
AAGTAGAGCTTATAAAGCTT+GGG - chr4_4:79674482-79674501 None:intergenic 30.0%
TAAGTAGAGCTTATAAAGCT+TGG - chr4_4:79674483-79674502 None:intergenic 30.0%
! AAGCTTTATAAGCTCTACTT+AGG + chr4_4:79674482-79674501 Msa0706660:intron 30.0%
ATATATATCTCTAGTCGAAG+TGG + chr4_4:79674507-79674526 Msa0706660:intron 30.0%
TATATATCTCTAGTCGAAGT+GGG + chr4_4:79674508-79674527 Msa0706660:intron 30.0%
! TTTTCCAGACTTCACATATA+TGG - chr4_4:79674564-79674583 None:intergenic 30.0%
CCTAAGCTCAAATTCTAATA+TGG - chr4_4:79674645-79674664 None:intergenic 30.0%
CCATATTAGAATTTGAGCTT+AGG + chr4_4:79674642-79674661 Msa0706660:intron 30.0%
TTTAAGTGTTCCACATTCAT+TGG - chr4_4:79674745-79674764 None:intergenic 30.0%
TGTAGTTTCTGTACACAAAA+AGG - chr4_4:79674798-79674817 None:intergenic 30.0%
GATGCATACAGTCATTAATA+TGG + chr4_4:79674834-79674853 Msa0706660:intron 30.0%
CAGTTCTATACAAGTTTAAC+CGG + chr4_4:79674917-79674936 Msa0706660:intron 30.0%
!!! AATTTTTTGGAAGGAACAAC+AGG - chr4_4:79675065-79675084 None:intergenic 30.0%
!! TGCTTTTCTCATTTGTTAAC+AGG + chr4_4:79675133-79675152 Msa0706660:intron 30.0%
!! ATTGGGTTGATTTATTGGAT+TGG + chr4_4:79675376-79675395 Msa0706660:intron 30.0%
! ATTGGATTTTAAATGTGCAG+TGG + chr4_4:79675394-79675413 Msa0706660:intron 30.0%
! TTGTTCCTTTATTTGATGCT+GGG - chr4_4:79675430-79675449 None:intergenic 30.0%
! TTTGTTCCTTTATTTGATGC+TGG - chr4_4:79675431-79675450 None:intergenic 30.0%
TGGATATATGGTTTGAAGAA+TGG - chr4_4:79675722-79675741 None:intergenic 30.0%
AGAAGTTATAACAGTAACTG+GGG - chr4_4:79675796-79675815 None:intergenic 30.0%
CAGAAGTTATAACAGTAACT+GGG - chr4_4:79675797-79675816 None:intergenic 30.0%
TCAGAAGTTATAACAGTAAC+TGG - chr4_4:79675798-79675817 None:intergenic 30.0%
!!! CCCATTTTCTTTATTTTGGT+AGG - chr4_4:79675876-79675895 None:intergenic 30.0%
GACAAAGATCAAATCTGAAT+GGG + chr4_4:79675929-79675948 Msa0706660:CDS 30.0%
CCAATGGTATAGATAAATCA+TGG - chr4_4:79676208-79676227 None:intergenic 30.0%
CCATGATTTATCTATACCAT+TGG + chr4_4:79676205-79676224 Msa0706660:CDS 30.0%
ATCTATACCATTGGATCTTA+AGG + chr4_4:79676214-79676233 Msa0706660:CDS 30.0%
ATTGGATCTTAAGGATTACT+GGG + chr4_4:79676223-79676242 Msa0706660:CDS 30.0%
AACTAGAAATAAACAAAGGG+GGG - chr4_4:79676424-79676443 None:intergenic 30.0%
TTACAGCAATCGCATTTAAA+AGG - chr4_4:79676474-79676493 None:intergenic 30.0%
! TTATGCACATGTGATTTTCT+AGG + chr4_4:79676505-79676524 Msa0706660:three_prime_UTR 30.0%
! GAGAAAAGTTTTCTATGCTA+CGG - chr4_4:79676583-79676602 None:intergenic 30.0%
AGAAAAATAAAGGGATCTCA+GGG - chr4_4:79676607-79676626 None:intergenic 30.0%
TAGAAAAATAAAGGGATCTC+AGG - chr4_4:79676608-79676627 None:intergenic 30.0%
ATGGTAATTGGGAAAATACA+GGG - chr4_4:79672722-79672741 None:intergenic 30.0%
AATGGTAATTGGGAAAATAC+AGG - chr4_4:79672723-79672742 None:intergenic 30.0%
! TTCTCTAAACCTTTGTTTCT+AGG + chr4_4:79672750-79672769 Msa0706660:intron 30.0%
AGAGAATTAAAGGGGAAAAA+AGG - chr4_4:79672883-79672902 None:intergenic 30.0%
TGGAAAGAGAGAGAATTAAA+GGG - chr4_4:79672892-79672911 None:intergenic 30.0%
ATGGAAAGAGAGAGAATTAA+AGG - chr4_4:79672893-79672912 None:intergenic 30.0%
! GTACATTTGGTGAAACAAAA+TGG - chr4_4:79672912-79672931 None:intergenic 30.0%
!! TTTTGTTTCACCAAATGTAC+AGG + chr4_4:79672912-79672931 Msa0706660:intron 30.0%
TTTGTTTCACCAAATGTACA+GGG + chr4_4:79672913-79672932 Msa0706660:intron 30.0%
GCTTTATGTGTAATAGTGTA+TGG + chr4_4:79673054-79673073 Msa0706660:intron 30.0%
AATTACGGTGGATATTTCAT+AGG + chr4_4:79673241-79673260 Msa0706660:intron 30.0%
ATATGCAATTGAAAGTCGAT+AGG - chr4_4:79673480-79673499 None:intergenic 30.0%
CAATTTATAAGTTGTGTCTC+TGG + chr4_4:79673614-79673633 Msa0706660:intron 30.0%
GTGTATAGCTACATTAAGTA+AGG - chr4_4:79673672-79673691 None:intergenic 30.0%
TACATCAAATAGAACCACAA+GGG - chr4_4:79673730-79673749 None:intergenic 30.0%
TTACATCAAATAGAACCACA+AGG - chr4_4:79673731-79673750 None:intergenic 30.0%
TGTCCAGCTTATATTTGAAA+AGG + chr4_4:79674029-79674048 Msa0706660:intron 30.0%
GTCCAGCTTATATTTGAAAA+GGG + chr4_4:79674030-79674049 Msa0706660:intron 30.0%
TGTATTTGTGTCAAGTTCTA+GGG - chr4_4:79674135-79674154 None:intergenic 30.0%
TTCTAAATACATCACCTACT+GGG - chr4_4:79674173-79674192 None:intergenic 30.0%
GGTGATGTATTTAGAAGATT+TGG + chr4_4:79674177-79674196 Msa0706660:intron 30.0%
TATAGCCTACAAATGTAGTA+AGG + chr4_4:79674296-79674315 Msa0706660:intron 30.0%
AAAGTCCTTACTACATTTGT+AGG - chr4_4:79674304-79674323 None:intergenic 30.0%
! ACTTCACAAATTGATTCTGT+GGG - chr4_4:79674451-79674470 None:intergenic 30.0%
ACAGAATCAATTTGTGAAGT+GGG + chr4_4:79674451-79674470 Msa0706660:intron 30.0%
AAGTAGAGCTTATAAAGCTT+GGG - chr4_4:79674482-79674501 None:intergenic 30.0%
TAAGTAGAGCTTATAAAGCT+TGG - chr4_4:79674483-79674502 None:intergenic 30.0%
! AAGCTTTATAAGCTCTACTT+AGG + chr4_4:79674482-79674501 Msa0706660:intron 30.0%
ATATATATCTCTAGTCGAAG+TGG + chr4_4:79674507-79674526 Msa0706660:intron 30.0%
TATATATCTCTAGTCGAAGT+GGG + chr4_4:79674508-79674527 Msa0706660:intron 30.0%
! TTTTCCAGACTTCACATATA+TGG - chr4_4:79674564-79674583 None:intergenic 30.0%
CCTAAGCTCAAATTCTAATA+TGG - chr4_4:79674645-79674664 None:intergenic 30.0%
CCATATTAGAATTTGAGCTT+AGG + chr4_4:79674642-79674661 Msa0706660:intron 30.0%
TTTAAGTGTTCCACATTCAT+TGG - chr4_4:79674745-79674764 None:intergenic 30.0%
TGTAGTTTCTGTACACAAAA+AGG - chr4_4:79674798-79674817 None:intergenic 30.0%
GATGCATACAGTCATTAATA+TGG + chr4_4:79674834-79674853 Msa0706660:intron 30.0%
CAGTTCTATACAAGTTTAAC+CGG + chr4_4:79674917-79674936 Msa0706660:intron 30.0%
!!! AATTTTTTGGAAGGAACAAC+AGG - chr4_4:79675065-79675084 None:intergenic 30.0%
!! TGCTTTTCTCATTTGTTAAC+AGG + chr4_4:79675133-79675152 Msa0706660:intron 30.0%
!! ATTGGGTTGATTTATTGGAT+TGG + chr4_4:79675376-79675395 Msa0706660:intron 30.0%
! ATTGGATTTTAAATGTGCAG+TGG + chr4_4:79675394-79675413 Msa0706660:intron 30.0%
! TTGTTCCTTTATTTGATGCT+GGG - chr4_4:79675430-79675449 None:intergenic 30.0%
! TTTGTTCCTTTATTTGATGC+TGG - chr4_4:79675431-79675450 None:intergenic 30.0%
TGGATATATGGTTTGAAGAA+TGG - chr4_4:79675722-79675741 None:intergenic 30.0%
AGAAGTTATAACAGTAACTG+GGG - chr4_4:79675796-79675815 None:intergenic 30.0%
CAGAAGTTATAACAGTAACT+GGG - chr4_4:79675797-79675816 None:intergenic 30.0%
TCAGAAGTTATAACAGTAAC+TGG - chr4_4:79675798-79675817 None:intergenic 30.0%
!!! CCCATTTTCTTTATTTTGGT+AGG - chr4_4:79675876-79675895 None:intergenic 30.0%
GACAAAGATCAAATCTGAAT+GGG + chr4_4:79675929-79675948 Msa0706660:CDS 30.0%
CCAATGGTATAGATAAATCA+TGG - chr4_4:79676208-79676227 None:intergenic 30.0%
CCATGATTTATCTATACCAT+TGG + chr4_4:79676205-79676224 Msa0706660:CDS 30.0%
ATCTATACCATTGGATCTTA+AGG + chr4_4:79676214-79676233 Msa0706660:CDS 30.0%
ATTGGATCTTAAGGATTACT+GGG + chr4_4:79676223-79676242 Msa0706660:CDS 30.0%
AACTAGAAATAAACAAAGGG+GGG - chr4_4:79676424-79676443 None:intergenic 30.0%
TTACAGCAATCGCATTTAAA+AGG - chr4_4:79676474-79676493 None:intergenic 30.0%
! TTATGCACATGTGATTTTCT+AGG + chr4_4:79676505-79676524 Msa0706660:three_prime_UTR 30.0%
! GAGAAAAGTTTTCTATGCTA+CGG - chr4_4:79676583-79676602 None:intergenic 30.0%
AGAAAAATAAAGGGATCTCA+GGG - chr4_4:79676607-79676626 None:intergenic 30.0%
TAGAAAAATAAAGGGATCTC+AGG - chr4_4:79676608-79676627 None:intergenic 30.0%
AGAACTTACAGCTACAGAAA+CGG - chr4_4:79672657-79672676 None:intergenic 35.0%
GGAAAGAGAGAGAATTAAAG+GGG - chr4_4:79672891-79672910 None:intergenic 35.0%
TTGTTTCACCAAATGTACAG+GGG + chr4_4:79672914-79672933 Msa0706660:intron 35.0%
! GTATGTACTGATGAATGGAA+TGG + chr4_4:79672988-79673007 Msa0706660:intron 35.0%
CTAATTAGTCCGACAAAAGA+TGG - chr4_4:79673212-79673231 None:intergenic 35.0%
TAGTCACTGTTAAATTACGG+TGG + chr4_4:79673229-79673248 Msa0706660:intron 35.0%
CTAGAGACAACATGTTACAT+GGG - chr4_4:79673453-79673472 None:intergenic 35.0%
ACTAGAGACAACATGTTACA+TGG - chr4_4:79673454-79673473 None:intergenic 35.0%
GTCTTGATTGTAGTGTAAAG+AGG + chr4_4:79673636-79673655 Msa0706660:intron 35.0%
! AAATGTTTTTCTTCCCCTTG+TGG + chr4_4:79673713-79673732 Msa0706660:intron 35.0%
ACATCAAATAGAACCACAAG+GGG - chr4_4:79673729-79673748 None:intergenic 35.0%
ATTGCGATCTTCAATCTTCA+AGG + chr4_4:79673760-79673779 Msa0706660:intron 35.0%
AAATATAAGCTGGACACTAG+AGG - chr4_4:79674025-79674044 None:intergenic 35.0%
! CTCCCTTTTCAAATATAAGC+TGG - chr4_4:79674035-79674054 None:intergenic 35.0%
CAGCTTATATTTGAAAAGGG+AGG + chr4_4:79674033-79674052 Msa0706660:intron 35.0%
TTGATTGAATCCAAACACAG+TGG + chr4_4:79674107-79674126 Msa0706660:intron 35.0%
CTGTATTTGTGTCAAGTTCT+AGG - chr4_4:79674136-79674155 None:intergenic 35.0%
AACTTGACACAAATACAGCT+AGG + chr4_4:79674138-79674157 Msa0706660:intron 35.0%
ACTTGACACAAATACAGCTA+GGG + chr4_4:79674139-79674158 Msa0706660:intron 35.0%
CTTCTAAATACATCACCTAC+TGG - chr4_4:79674174-79674193 None:intergenic 35.0%
GAACATGTTGGACATATGAA+AGG - chr4_4:79674395-79674414 None:intergenic 35.0%
AAATTGTGAGAGGAACATGT+TGG - chr4_4:79674407-79674426 None:intergenic 35.0%
! ACATGTTCCTCTCACAATTT+TGG + chr4_4:79674407-79674426 Msa0706660:intron 35.0%
! CTTCACAAATTGATTCTGTG+GGG - chr4_4:79674450-79674469 None:intergenic 35.0%
! CACTTCACAAATTGATTCTG+TGG - chr4_4:79674452-79674471 None:intergenic 35.0%
CACAGAATCAATTTGTGAAG+TGG + chr4_4:79674450-79674469 Msa0706660:intron 35.0%
CAGAATCAATTTGTGAAGTG+GGG + chr4_4:79674452-79674471 Msa0706660:intron 35.0%
TTCCACATTCATTGGAGATA+TGG - chr4_4:79674737-79674756 None:intergenic 35.0%
GCATACAGTCATTAATATGG+TGG + chr4_4:79674837-79674856 Msa0706660:intron 35.0%
TGAATAATTACCCTCCATTC+TGG - chr4_4:79674878-79674897 None:intergenic 35.0%
GAACAGCTTGTATCAAAAGA+AGG - chr4_4:79674981-79675000 None:intergenic 35.0%
TACAAGCTGTTCATTCTGAT+TGG + chr4_4:79674989-79675008 Msa0706660:intron 35.0%
!!! GCAGAGAGAAATTTTTTGGA+AGG - chr4_4:79675074-79675093 None:intergenic 35.0%
GGCATCAAGTCAATAAACAA+GGG - chr4_4:79675106-79675125 None:intergenic 35.0%
TGGCATCAAGTCAATAAACA+AGG - chr4_4:79675107-79675126 None:intergenic 35.0%
AAATGAGAAAAGCAACAGCT+TGG - chr4_4:79675127-79675146 None:intergenic 35.0%
! TATGCCTACCGTTTTCATAT+TGG - chr4_4:79675267-79675286 None:intergenic 35.0%
TATGTGCATTCTACTTACCA+GGG - chr4_4:79675317-79675336 None:intergenic 35.0%
ATATGTGCATTCTACTTACC+AGG - chr4_4:79675318-79675337 None:intergenic 35.0%
!! TTAACTTGCAGTTGCACTAT+TGG + chr4_4:79675358-79675377 Msa0706660:intron 35.0%
! TAACTTGCAGTTGCACTATT+GGG + chr4_4:79675359-79675378 Msa0706660:intron 35.0%
!! GCACTATTGGGTTGATTTAT+TGG + chr4_4:79675371-79675390 Msa0706660:intron 35.0%
TTTAAATGTGCAGTGGAATG+TGG + chr4_4:79675401-79675420 Msa0706660:intron 35.0%
! TGTTCCTTTATTTGATGCTG+GGG - chr4_4:79675429-79675448 None:intergenic 35.0%
TCTTCTTGAACTTGAACTAG+AGG + chr4_4:79675506-79675525 Msa0706660:CDS 35.0%
AGTACTATTCCGACTTTGAA+GGG - chr4_4:79675649-79675668 None:intergenic 35.0%
CTTCTGTCATGTTGGATATA+TGG - chr4_4:79675734-79675753 None:intergenic 35.0%
!! CTCGCCCATTTTCTTTATTT+TGG - chr4_4:79675880-79675899 None:intergenic 35.0%
CAAAATAAAGAAAATGGGCG+AGG + chr4_4:79675878-79675897 Msa0706660:CDS 35.0%
AAATGGGCGAGGATTTAAAT+AGG + chr4_4:79675889-79675908 Msa0706660:CDS 35.0%
AATAGGAAGGCTTATTCTGA+AGG + chr4_4:79675906-79675925 Msa0706660:CDS 35.0%
ATAGGAAGGCTTATTCTGAA+GGG + chr4_4:79675907-79675926 Msa0706660:CDS 35.0%
GGACAAAGATCAAATCTGAA+TGG + chr4_4:79675928-79675947 Msa0706660:CDS 35.0%
AGATCAAATCTGAATGGGAT+AGG + chr4_4:79675934-79675953 Msa0706660:CDS 35.0%
! TTTTTAGACGACTTCTCAGT+AGG + chr4_4:79676168-79676187 Msa0706660:CDS 35.0%
CAGTAATCCTTAAGATCCAA+TGG - chr4_4:79676224-79676243 None:intergenic 35.0%
CATTGGATCTTAAGGATTAC+TGG + chr4_4:79676222-79676241 Msa0706660:CDS 35.0%
ACTCGAAACAAATGAATGTC+AGG - chr4_4:79676290-79676309 None:intergenic 35.0%
!! TTTTGATTACAGCTGGTGAT+AGG - chr4_4:79676334-79676353 None:intergenic 35.0%
!! GCAGGTGATTTTTCAATAGA+AGG + chr4_4:79676394-79676413 Msa0706660:three_prime_UTR 35.0%
AGAAAAAGGAAAGAACATGC+AGG - chr4_4:79676547-79676566 None:intergenic 35.0%
AAAAATAAAGGGATCTCAGG+GGG - chr4_4:79676605-79676624 None:intergenic 35.0%
GAAAAATAAAGGGATCTCAG+GGG - chr4_4:79676606-79676625 None:intergenic 35.0%
AGAACTTACAGCTACAGAAA+CGG - chr4_4:79672657-79672676 None:intergenic 35.0%
GGAAAGAGAGAGAATTAAAG+GGG - chr4_4:79672891-79672910 None:intergenic 35.0%
TTGTTTCACCAAATGTACAG+GGG + chr4_4:79672914-79672933 Msa0706660:intron 35.0%
! GTATGTACTGATGAATGGAA+TGG + chr4_4:79672988-79673007 Msa0706660:intron 35.0%
CTAATTAGTCCGACAAAAGA+TGG - chr4_4:79673212-79673231 None:intergenic 35.0%
TAGTCACTGTTAAATTACGG+TGG + chr4_4:79673229-79673248 Msa0706660:intron 35.0%
CTAGAGACAACATGTTACAT+GGG - chr4_4:79673453-79673472 None:intergenic 35.0%
ACTAGAGACAACATGTTACA+TGG - chr4_4:79673454-79673473 None:intergenic 35.0%
GTCTTGATTGTAGTGTAAAG+AGG + chr4_4:79673636-79673655 Msa0706660:intron 35.0%
! AAATGTTTTTCTTCCCCTTG+TGG + chr4_4:79673713-79673732 Msa0706660:intron 35.0%
ACATCAAATAGAACCACAAG+GGG - chr4_4:79673729-79673748 None:intergenic 35.0%
ATTGCGATCTTCAATCTTCA+AGG + chr4_4:79673760-79673779 Msa0706660:intron 35.0%
AAATATAAGCTGGACACTAG+AGG - chr4_4:79674025-79674044 None:intergenic 35.0%
! CTCCCTTTTCAAATATAAGC+TGG - chr4_4:79674035-79674054 None:intergenic 35.0%
CAGCTTATATTTGAAAAGGG+AGG + chr4_4:79674033-79674052 Msa0706660:intron 35.0%
TTGATTGAATCCAAACACAG+TGG + chr4_4:79674107-79674126 Msa0706660:intron 35.0%
CTGTATTTGTGTCAAGTTCT+AGG - chr4_4:79674136-79674155 None:intergenic 35.0%
AACTTGACACAAATACAGCT+AGG + chr4_4:79674138-79674157 Msa0706660:intron 35.0%
ACTTGACACAAATACAGCTA+GGG + chr4_4:79674139-79674158 Msa0706660:intron 35.0%
CTTCTAAATACATCACCTAC+TGG - chr4_4:79674174-79674193 None:intergenic 35.0%
GAACATGTTGGACATATGAA+AGG - chr4_4:79674395-79674414 None:intergenic 35.0%
AAATTGTGAGAGGAACATGT+TGG - chr4_4:79674407-79674426 None:intergenic 35.0%
! ACATGTTCCTCTCACAATTT+TGG + chr4_4:79674407-79674426 Msa0706660:intron 35.0%
! CTTCACAAATTGATTCTGTG+GGG - chr4_4:79674450-79674469 None:intergenic 35.0%
! CACTTCACAAATTGATTCTG+TGG - chr4_4:79674452-79674471 None:intergenic 35.0%
CACAGAATCAATTTGTGAAG+TGG + chr4_4:79674450-79674469 Msa0706660:intron 35.0%
CAGAATCAATTTGTGAAGTG+GGG + chr4_4:79674452-79674471 Msa0706660:intron 35.0%
TTCCACATTCATTGGAGATA+TGG - chr4_4:79674737-79674756 None:intergenic 35.0%
GCATACAGTCATTAATATGG+TGG + chr4_4:79674837-79674856 Msa0706660:intron 35.0%
TGAATAATTACCCTCCATTC+TGG - chr4_4:79674878-79674897 None:intergenic 35.0%
GAACAGCTTGTATCAAAAGA+AGG - chr4_4:79674981-79675000 None:intergenic 35.0%
TACAAGCTGTTCATTCTGAT+TGG + chr4_4:79674989-79675008 Msa0706660:intron 35.0%
!!! GCAGAGAGAAATTTTTTGGA+AGG - chr4_4:79675074-79675093 None:intergenic 35.0%
GGCATCAAGTCAATAAACAA+GGG - chr4_4:79675106-79675125 None:intergenic 35.0%
TGGCATCAAGTCAATAAACA+AGG - chr4_4:79675107-79675126 None:intergenic 35.0%
AAATGAGAAAAGCAACAGCT+TGG - chr4_4:79675127-79675146 None:intergenic 35.0%
! TATGCCTACCGTTTTCATAT+TGG - chr4_4:79675267-79675286 None:intergenic 35.0%
TATGTGCATTCTACTTACCA+GGG - chr4_4:79675317-79675336 None:intergenic 35.0%
ATATGTGCATTCTACTTACC+AGG - chr4_4:79675318-79675337 None:intergenic 35.0%
!! TTAACTTGCAGTTGCACTAT+TGG + chr4_4:79675358-79675377 Msa0706660:intron 35.0%
! TAACTTGCAGTTGCACTATT+GGG + chr4_4:79675359-79675378 Msa0706660:intron 35.0%
!! GCACTATTGGGTTGATTTAT+TGG + chr4_4:79675371-79675390 Msa0706660:intron 35.0%
TTTAAATGTGCAGTGGAATG+TGG + chr4_4:79675401-79675420 Msa0706660:intron 35.0%
! TGTTCCTTTATTTGATGCTG+GGG - chr4_4:79675429-79675448 None:intergenic 35.0%
TCTTCTTGAACTTGAACTAG+AGG + chr4_4:79675506-79675525 Msa0706660:CDS 35.0%
AGTACTATTCCGACTTTGAA+GGG - chr4_4:79675649-79675668 None:intergenic 35.0%
CTTCTGTCATGTTGGATATA+TGG - chr4_4:79675734-79675753 None:intergenic 35.0%
!! CTCGCCCATTTTCTTTATTT+TGG - chr4_4:79675880-79675899 None:intergenic 35.0%
CAAAATAAAGAAAATGGGCG+AGG + chr4_4:79675878-79675897 Msa0706660:CDS 35.0%
AAATGGGCGAGGATTTAAAT+AGG + chr4_4:79675889-79675908 Msa0706660:CDS 35.0%
AATAGGAAGGCTTATTCTGA+AGG + chr4_4:79675906-79675925 Msa0706660:CDS 35.0%
ATAGGAAGGCTTATTCTGAA+GGG + chr4_4:79675907-79675926 Msa0706660:CDS 35.0%
GGACAAAGATCAAATCTGAA+TGG + chr4_4:79675928-79675947 Msa0706660:CDS 35.0%
AGATCAAATCTGAATGGGAT+AGG + chr4_4:79675934-79675953 Msa0706660:CDS 35.0%
! TTTTTAGACGACTTCTCAGT+AGG + chr4_4:79676168-79676187 Msa0706660:CDS 35.0%
CAGTAATCCTTAAGATCCAA+TGG - chr4_4:79676224-79676243 None:intergenic 35.0%
CATTGGATCTTAAGGATTAC+TGG + chr4_4:79676222-79676241 Msa0706660:CDS 35.0%
ACTCGAAACAAATGAATGTC+AGG - chr4_4:79676290-79676309 None:intergenic 35.0%
!! TTTTGATTACAGCTGGTGAT+AGG - chr4_4:79676334-79676353 None:intergenic 35.0%
!! GCAGGTGATTTTTCAATAGA+AGG + chr4_4:79676394-79676413 Msa0706660:three_prime_UTR 35.0%
AGAAAAAGGAAAGAACATGC+AGG - chr4_4:79676547-79676566 None:intergenic 35.0%
AAAAATAAAGGGATCTCAGG+GGG - chr4_4:79676605-79676624 None:intergenic 35.0%
GAAAAATAAAGGGATCTCAG+GGG - chr4_4:79676606-79676625 None:intergenic 35.0%
AACCCATGACCACTTACTTA+GGG - chr4_4:79673162-79673181 None:intergenic 40.0%
! GAGGAGAATCCATCTTTTGT+CGG + chr4_4:79673200-79673219 Msa0706660:intron 40.0%
TTACAATAGGCCATCAGCTA+AGG + chr4_4:79673284-79673303 Msa0706660:intron 40.0%
ATTGGAAAAGAAGCAGAGAG+TGG - chr4_4:79673344-79673363 None:intergenic 40.0%
GACGTATTGCTTATGTGTGA+TGG + chr4_4:79673541-79673560 Msa0706660:intron 40.0%
!! ATTGCTTATGTGTGATGGAC+AGG + chr4_4:79673546-79673565 Msa0706660:intron 40.0%
!! TTGCTTATGTGTGATGGACA+GGG + chr4_4:79673547-79673566 Msa0706660:intron 40.0%
TTTAAGGAAAGGGAAACGTG+CGG - chr4_4:79673797-79673816 None:intergenic 40.0%
AGTTTGTGGTCAAGAAAGAG+GGG - chr4_4:79674259-79674278 None:intergenic 40.0%
CAGTTTGTGGTCAAGAAAGA+GGG - chr4_4:79674260-79674279 None:intergenic 40.0%
ACAGTTTGTGGTCAAGAAAG+AGG - chr4_4:79674261-79674280 None:intergenic 40.0%
CATATATATGGACAAACCCC+TGG - chr4_4:79674344-79674363 None:intergenic 40.0%
GTGGGGTTGAAATAAGTCTT+GGG - chr4_4:79674433-79674452 None:intergenic 40.0%
TGTGGGGTTGAAATAAGTCT+TGG - chr4_4:79674434-79674453 None:intergenic 40.0%
ACTTCACATATATGGTCCTG+CGG - chr4_4:79674556-79674575 None:intergenic 40.0%
AGGACCATATATGTGAAGTC+TGG + chr4_4:79674557-79674576 Msa0706660:intron 40.0%
GAGTGGAATAACAGAGATTG+TGG + chr4_4:79674588-79674607 Msa0706660:intron 40.0%
TCTATCTCAGACCTGTTGTT+TGG - chr4_4:79674614-79674633 None:intergenic 40.0%
AAGCCATATACGCACTACTT+AGG + chr4_4:79674711-79674730 Msa0706660:intron 40.0%
CAGTCATTAATATGGTGGCA+AGG + chr4_4:79674842-79674861 Msa0706660:intron 40.0%
! ATATGGTGGCAAGGTTTGTT+TGG + chr4_4:79674851-79674870 Msa0706660:intron 40.0%
! TATGGTGGCAAGGTTTGTTT+GGG + chr4_4:79674852-79674871 Msa0706660:intron 40.0%
GGAGGGTAATTATTCAAGCT+TGG + chr4_4:79674882-79674901 Msa0706660:intron 40.0%
!!! GGCAGCAGAGAGAAATTTTT+TGG - chr4_4:79675078-79675097 None:intergenic 40.0%
AGTCAATAAACAAGGGAGAG+AGG - chr4_4:79675099-79675118 None:intergenic 40.0%
! ATTGGTCTCAAGAAGTCTTG+AGG - chr4_4:79675195-79675214 None:intergenic 40.0%
TTGCAACAGATGCGGTAAAT+TGG - chr4_4:79675213-79675232 None:intergenic 40.0%
! AGAGGATTTTGCAACAGATG+CGG - chr4_4:79675221-79675240 None:intergenic 40.0%
AAAATCCTCTGGATGCAAGA+TGG + chr4_4:79675231-79675250 Msa0706660:exon 40.0%
GATGACCGCCAATATGAAAA+CGG + chr4_4:79675256-79675275 Msa0706660:CDS 40.0%
TGAAAACGGTAGGCATAAGA+TGG + chr4_4:79675270-79675289 Msa0706660:CDS 40.0%
!! CATAAGATGGACTACTACAG+AGG + chr4_4:79675283-79675302 Msa0706660:CDS 40.0%
TTAGGTCCATTATGGCTGAA+AGG + chr4_4:79675475-79675494 Msa0706660:CDS 40.0%
ATCTGAAAAGAATGAAGCCC+TGG + chr4_4:79675536-79675555 Msa0706660:CDS 40.0%
CAGTACTATTCCGACTTTGA+AGG - chr4_4:79675650-79675669 None:intergenic 40.0%
CTTCAAAGTCGGAATAGTAC+TGG + chr4_4:79675648-79675667 Msa0706660:CDS 40.0%
ACTGGCAACTTTCCATTCAA+TGG + chr4_4:79675666-79675685 Msa0706660:CDS 40.0%
CGTTGAATTCCACCATTGAA+TGG - chr4_4:79675681-79675700 None:intergenic 40.0%
! TTCAATGGTGGAATTCAACG+TGG + chr4_4:79675681-79675700 Msa0706660:CDS 40.0%
! ATATGCTGCTTCTGTCATGT+TGG - chr4_4:79675742-79675761 None:intergenic 40.0%
AGTTATAACAGTAACTGGGG+AGG - chr4_4:79675793-79675812 None:intergenic 40.0%
! TGGATGCATTGACAATGTAG+TGG - chr4_4:79676087-79676106 None:intergenic 40.0%
! GTAACGATTTGTTCCATGTC+TGG - chr4_4:79676249-79676268 None:intergenic 40.0%
CTGTAATCAAAACCATGCCT+TGG + chr4_4:79676342-79676361 Msa0706660:three_prime_UTR 40.0%
! TGCACATGTGATTTTCTAGG+TGG + chr4_4:79676508-79676527 Msa0706660:three_prime_UTR 40.0%
AACCCATGACCACTTACTTA+GGG - chr4_4:79673162-79673181 None:intergenic 40.0%
! GAGGAGAATCCATCTTTTGT+CGG + chr4_4:79673200-79673219 Msa0706660:intron 40.0%
TTACAATAGGCCATCAGCTA+AGG + chr4_4:79673284-79673303 Msa0706660:intron 40.0%
ATTGGAAAAGAAGCAGAGAG+TGG - chr4_4:79673344-79673363 None:intergenic 40.0%
GACGTATTGCTTATGTGTGA+TGG + chr4_4:79673541-79673560 Msa0706660:intron 40.0%
!! ATTGCTTATGTGTGATGGAC+AGG + chr4_4:79673546-79673565 Msa0706660:intron 40.0%
!! TTGCTTATGTGTGATGGACA+GGG + chr4_4:79673547-79673566 Msa0706660:intron 40.0%
TTTAAGGAAAGGGAAACGTG+CGG - chr4_4:79673797-79673816 None:intergenic 40.0%
AGTTTGTGGTCAAGAAAGAG+GGG - chr4_4:79674259-79674278 None:intergenic 40.0%
CAGTTTGTGGTCAAGAAAGA+GGG - chr4_4:79674260-79674279 None:intergenic 40.0%
ACAGTTTGTGGTCAAGAAAG+AGG - chr4_4:79674261-79674280 None:intergenic 40.0%
CATATATATGGACAAACCCC+TGG - chr4_4:79674344-79674363 None:intergenic 40.0%
GTGGGGTTGAAATAAGTCTT+GGG - chr4_4:79674433-79674452 None:intergenic 40.0%
TGTGGGGTTGAAATAAGTCT+TGG - chr4_4:79674434-79674453 None:intergenic 40.0%
ACTTCACATATATGGTCCTG+CGG - chr4_4:79674556-79674575 None:intergenic 40.0%
AGGACCATATATGTGAAGTC+TGG + chr4_4:79674557-79674576 Msa0706660:intron 40.0%
GAGTGGAATAACAGAGATTG+TGG + chr4_4:79674588-79674607 Msa0706660:intron 40.0%
TCTATCTCAGACCTGTTGTT+TGG - chr4_4:79674614-79674633 None:intergenic 40.0%
AAGCCATATACGCACTACTT+AGG + chr4_4:79674711-79674730 Msa0706660:intron 40.0%
CAGTCATTAATATGGTGGCA+AGG + chr4_4:79674842-79674861 Msa0706660:intron 40.0%
! ATATGGTGGCAAGGTTTGTT+TGG + chr4_4:79674851-79674870 Msa0706660:intron 40.0%
! TATGGTGGCAAGGTTTGTTT+GGG + chr4_4:79674852-79674871 Msa0706660:intron 40.0%
GGAGGGTAATTATTCAAGCT+TGG + chr4_4:79674882-79674901 Msa0706660:intron 40.0%
!!! GGCAGCAGAGAGAAATTTTT+TGG - chr4_4:79675078-79675097 None:intergenic 40.0%
AGTCAATAAACAAGGGAGAG+AGG - chr4_4:79675099-79675118 None:intergenic 40.0%
! ATTGGTCTCAAGAAGTCTTG+AGG - chr4_4:79675195-79675214 None:intergenic 40.0%
TTGCAACAGATGCGGTAAAT+TGG - chr4_4:79675213-79675232 None:intergenic 40.0%
! AGAGGATTTTGCAACAGATG+CGG - chr4_4:79675221-79675240 None:intergenic 40.0%
AAAATCCTCTGGATGCAAGA+TGG + chr4_4:79675231-79675250 Msa0706660:exon 40.0%
GATGACCGCCAATATGAAAA+CGG + chr4_4:79675256-79675275 Msa0706660:CDS 40.0%
TGAAAACGGTAGGCATAAGA+TGG + chr4_4:79675270-79675289 Msa0706660:CDS 40.0%
!! CATAAGATGGACTACTACAG+AGG + chr4_4:79675283-79675302 Msa0706660:CDS 40.0%
TTAGGTCCATTATGGCTGAA+AGG + chr4_4:79675475-79675494 Msa0706660:CDS 40.0%
ATCTGAAAAGAATGAAGCCC+TGG + chr4_4:79675536-79675555 Msa0706660:CDS 40.0%
CAGTACTATTCCGACTTTGA+AGG - chr4_4:79675650-79675669 None:intergenic 40.0%
CTTCAAAGTCGGAATAGTAC+TGG + chr4_4:79675648-79675667 Msa0706660:CDS 40.0%
ACTGGCAACTTTCCATTCAA+TGG + chr4_4:79675666-79675685 Msa0706660:CDS 40.0%
CGTTGAATTCCACCATTGAA+TGG - chr4_4:79675681-79675700 None:intergenic 40.0%
! TTCAATGGTGGAATTCAACG+TGG + chr4_4:79675681-79675700 Msa0706660:CDS 40.0%
! ATATGCTGCTTCTGTCATGT+TGG - chr4_4:79675742-79675761 None:intergenic 40.0%
AGTTATAACAGTAACTGGGG+AGG - chr4_4:79675793-79675812 None:intergenic 40.0%
! TGGATGCATTGACAATGTAG+TGG - chr4_4:79676087-79676106 None:intergenic 40.0%
! GTAACGATTTGTTCCATGTC+TGG - chr4_4:79676249-79676268 None:intergenic 40.0%
CTGTAATCAAAACCATGCCT+TGG + chr4_4:79676342-79676361 Msa0706660:three_prime_UTR 40.0%
! TGCACATGTGATTTTCTAGG+TGG + chr4_4:79676508-79676527 Msa0706660:three_prime_UTR 40.0%
AGAACATGCCCCTGTACATT+TGG - chr4_4:79672925-79672944 None:intergenic 45.0%
CACCCTAAGTAAGTGGTCAT+GGG + chr4_4:79673157-79673176 Msa0706660:intron 45.0%
GAACCCATGACCACTTACTT+AGG - chr4_4:79673163-79673182 None:intergenic 45.0%
!! TTCTAGGGTACCACTGTGTT+TGG - chr4_4:79674120-79674139 None:intergenic 45.0%
GTCAGACTGCATACAGTTTG+TGG - chr4_4:79674273-79674292 None:intergenic 45.0%
!! TCTCTAGAGTGTCAAGTACC+AGG + chr4_4:79674323-79674342 Msa0706660:intron 45.0%
!! CTCTAGAGTGTCAAGTACCA+GGG + chr4_4:79674324-79674343 Msa0706660:intron 45.0%
! TCTAGAGTGTCAAGTACCAG+GGG + chr4_4:79674325-79674344 Msa0706660:intron 45.0%
TCTTGGGCCAAAATTGTGAG+AGG - chr4_4:79674417-79674436 None:intergenic 45.0%
CTTCACATATATGGTCCTGC+GGG - chr4_4:79674555-79674574 None:intergenic 45.0%
GAAGTCTGGAAAAATGCGAG+TGG + chr4_4:79674571-79674590 Msa0706660:intron 45.0%
AGAGATTGTGGCCAAACAAC+AGG + chr4_4:79674600-79674619 Msa0706660:intron 45.0%
TGGCCTAAGTAGTGCGTATA+TGG - chr4_4:79674717-79674736 None:intergenic 45.0%
GGCCATATCTCCAATGAATG+TGG + chr4_4:79674732-79674751 Msa0706660:intron 45.0%
! AAGGTTTGTTTGGGCCAGAA+TGG + chr4_4:79674861-79674880 Msa0706660:intron 45.0%
TTTGTTTGGGCCAGAATGGA+GGG + chr4_4:79674865-79674884 Msa0706660:intron 45.0%
GCATCTGTTGCAAAATCCTC+TGG + chr4_4:79675220-79675239 Msa0706660:five_prime_UTR 45.0%
ACCGCCAATATGAAAACGGT+AGG + chr4_4:79675260-79675279 Msa0706660:CDS 45.0%
! GCCTACCGTTTTCATATTGG+CGG - chr4_4:79675264-79675283 None:intergenic 45.0%
GGATCCCCAGCATCAAATAA+AGG + chr4_4:79675422-79675441 Msa0706660:CDS 45.0%
TCAGAGGGATAATGCTCTAC+TGG + chr4_4:79675602-79675621 Msa0706660:CDS 45.0%
GGGATAATGCTCTACTGGAA+CGG + chr4_4:79675607-79675626 Msa0706660:CDS 45.0%
GGATAATGCTCTACTGGAAC+GGG + chr4_4:79675608-79675627 Msa0706660:CDS 45.0%
GGCAACTTTCCATTCAATGG+TGG + chr4_4:79675669-79675688 Msa0706660:CDS 45.0%
GAATTCAACGTGGATCCAAG+CGG + chr4_4:79675691-79675710 Msa0706660:CDS 45.0%
AGAAGCAGCATATAGCACGA+CGG + chr4_4:79675749-79675768 Msa0706660:CDS 45.0%
GGGCGAGGATTTAAATAGGA+AGG + chr4_4:79675893-79675912 Msa0706660:CDS 45.0%
CAAATCTGAATGGGATAGGC+AGG + chr4_4:79675938-79675957 Msa0706660:CDS 45.0%
TACCACGACAGTGCTACAAA+TGG + chr4_4:79676030-79676049 Msa0706660:CDS 45.0%
ACCACGACAGTGCTACAAAT+GGG + chr4_4:79676031-79676050 Msa0706660:CDS 45.0%
CTCAGTAGGTTTGCATCAGA+AGG + chr4_4:79676182-79676201 Msa0706660:CDS 45.0%
TGGTGATAGGCGGTCTAAAA+AGG - chr4_4:79676321-79676340 None:intergenic 45.0%
TGATTACAGCTGGTGATAGG+CGG - chr4_4:79676331-79676350 None:intergenic 45.0%
!!! GGCATGGTTTTGATTACAGC+TGG - chr4_4:79676341-79676360 None:intergenic 45.0%
ATATCTTGCTGACCAAGGCA+TGG - chr4_4:79676357-79676376 None:intergenic 45.0%
CAAGCATATCTTGCTGACCA+AGG - chr4_4:79676362-79676381 None:intergenic 45.0%
AGAACATGCCCCTGTACATT+TGG - chr4_4:79672925-79672944 None:intergenic 45.0%
CACCCTAAGTAAGTGGTCAT+GGG + chr4_4:79673157-79673176 Msa0706660:intron 45.0%
GAACCCATGACCACTTACTT+AGG - chr4_4:79673163-79673182 None:intergenic 45.0%
!! TTCTAGGGTACCACTGTGTT+TGG - chr4_4:79674120-79674139 None:intergenic 45.0%
GTCAGACTGCATACAGTTTG+TGG - chr4_4:79674273-79674292 None:intergenic 45.0%
!! TCTCTAGAGTGTCAAGTACC+AGG + chr4_4:79674323-79674342 Msa0706660:intron 45.0%
!! CTCTAGAGTGTCAAGTACCA+GGG + chr4_4:79674324-79674343 Msa0706660:intron 45.0%
! TCTAGAGTGTCAAGTACCAG+GGG + chr4_4:79674325-79674344 Msa0706660:intron 45.0%
TCTTGGGCCAAAATTGTGAG+AGG - chr4_4:79674417-79674436 None:intergenic 45.0%
CTTCACATATATGGTCCTGC+GGG - chr4_4:79674555-79674574 None:intergenic 45.0%
GAAGTCTGGAAAAATGCGAG+TGG + chr4_4:79674571-79674590 Msa0706660:intron 45.0%
AGAGATTGTGGCCAAACAAC+AGG + chr4_4:79674600-79674619 Msa0706660:intron 45.0%
TGGCCTAAGTAGTGCGTATA+TGG - chr4_4:79674717-79674736 None:intergenic 45.0%
GGCCATATCTCCAATGAATG+TGG + chr4_4:79674732-79674751 Msa0706660:intron 45.0%
! AAGGTTTGTTTGGGCCAGAA+TGG + chr4_4:79674861-79674880 Msa0706660:intron 45.0%
TTTGTTTGGGCCAGAATGGA+GGG + chr4_4:79674865-79674884 Msa0706660:intron 45.0%
GCATCTGTTGCAAAATCCTC+TGG + chr4_4:79675220-79675239 Msa0706660:five_prime_UTR 45.0%
ACCGCCAATATGAAAACGGT+AGG + chr4_4:79675260-79675279 Msa0706660:CDS 45.0%
! GCCTACCGTTTTCATATTGG+CGG - chr4_4:79675264-79675283 None:intergenic 45.0%
GGATCCCCAGCATCAAATAA+AGG + chr4_4:79675422-79675441 Msa0706660:CDS 45.0%
TCAGAGGGATAATGCTCTAC+TGG + chr4_4:79675602-79675621 Msa0706660:CDS 45.0%
GGGATAATGCTCTACTGGAA+CGG + chr4_4:79675607-79675626 Msa0706660:CDS 45.0%
GGATAATGCTCTACTGGAAC+GGG + chr4_4:79675608-79675627 Msa0706660:CDS 45.0%
GGCAACTTTCCATTCAATGG+TGG + chr4_4:79675669-79675688 Msa0706660:CDS 45.0%
GAATTCAACGTGGATCCAAG+CGG + chr4_4:79675691-79675710 Msa0706660:CDS 45.0%
AGAAGCAGCATATAGCACGA+CGG + chr4_4:79675749-79675768 Msa0706660:CDS 45.0%
GGGCGAGGATTTAAATAGGA+AGG + chr4_4:79675893-79675912 Msa0706660:CDS 45.0%
CAAATCTGAATGGGATAGGC+AGG + chr4_4:79675938-79675957 Msa0706660:CDS 45.0%
TACCACGACAGTGCTACAAA+TGG + chr4_4:79676030-79676049 Msa0706660:CDS 45.0%
ACCACGACAGTGCTACAAAT+GGG + chr4_4:79676031-79676050 Msa0706660:CDS 45.0%
CTCAGTAGGTTTGCATCAGA+AGG + chr4_4:79676182-79676201 Msa0706660:CDS 45.0%
TGGTGATAGGCGGTCTAAAA+AGG - chr4_4:79676321-79676340 None:intergenic 45.0%
TGATTACAGCTGGTGATAGG+CGG - chr4_4:79676331-79676350 None:intergenic 45.0%
!!! GGCATGGTTTTGATTACAGC+TGG - chr4_4:79676341-79676360 None:intergenic 45.0%
ATATCTTGCTGACCAAGGCA+TGG - chr4_4:79676357-79676376 None:intergenic 45.0%
CAAGCATATCTTGCTGACCA+AGG - chr4_4:79676362-79676381 None:intergenic 45.0%
!! AAAAAAAAAAAAACTATTTA+AGG - chr4_4:79673813-79673832 None:intergenic 5.0%
!! AAAAAAAAAAAAACTATTTA+AGG - chr4_4:79673813-79673832 None:intergenic 5.0%
AAACATGACACGGGTGAGGA+AGG + chr4_4:79672571-79672590 Msa0706660:five_prime_UTR 50.0%
TCTCTCTCTCTCTCTCTCTC+TGG + chr4_4:79672614-79672633 Msa0706660:five_prime_UTR 50.0%
CGAGGGCAGTACCAAATAAG+AGG - chr4_4:79673135-79673154 None:intergenic 50.0%
! CACTTACTTAGGGTGCTCGA+GGG - chr4_4:79673152-79673171 None:intergenic 50.0%
GCACCCTAAGTAAGTGGTCA+TGG + chr4_4:79673156-79673175 Msa0706660:intron 50.0%
ATTCTCCTCTCCAGACAGTC+GGG - chr4_4:79673189-79673208 None:intergenic 50.0%
GATTCTCCTCTCCAGACAGT+CGG - chr4_4:79673190-79673209 None:intergenic 50.0%
CACGGTGAAACCTTAGCTGA+TGG - chr4_4:79673297-79673316 None:intergenic 50.0%
CTAGGGATGTCATACCCAGT+AGG + chr4_4:79674156-79674175 Msa0706660:intron 50.0%
ACATATATGGTCCTGCGGGT+GGG - chr4_4:79674551-79674570 None:intergenic 50.0%
GTTTGTTTGGGCCAGAATGG+AGG + chr4_4:79674864-79674883 Msa0706660:intron 50.0%
ATCGTCCATCTTGCATCCAG+AGG - chr4_4:79675239-79675258 None:intergenic 50.0%
GTCCATTATGGCTGAAAGGC+AGG + chr4_4:79675479-79675498 Msa0706660:CDS 50.0%
TGCCTGCCTTTCAGCCATAA+TGG - chr4_4:79675484-79675503 None:intergenic 50.0%
! GGATGAAGCACTTGCTCAGA+GGG + chr4_4:79675587-79675606 Msa0706660:CDS 50.0%
CTCTTGCAGCCCTTCAAAGT+CGG + chr4_4:79675637-79675656 Msa0706660:CDS 50.0%
TGAAGAATGGTGCATCCGCT+TGG - chr4_4:79675709-79675728 None:intergenic 50.0%
GAATGGGATAGGCAGGATGT+TGG + chr4_4:79675945-79675964 Msa0706660:CDS 50.0%
CTCCAGTACACGTGCAAACT+GGG - chr4_4:79676010-79676029 None:intergenic 50.0%
ACTCCAGTACACGTGCAAAC+TGG - chr4_4:79676011-79676030 None:intergenic 50.0%
CCACGACAGTGCTACAAATG+GGG + chr4_4:79676032-79676051 Msa0706660:CDS 50.0%
CACGACAGTGCTACAAATGG+GGG + chr4_4:79676033-79676052 Msa0706660:CDS 50.0%
CAGTGCTACAAATGGGGGAA+TGG + chr4_4:79676038-79676057 Msa0706660:CDS 50.0%
TGCTACAAATGGGGGAATGG+TGG + chr4_4:79676041-79676060 Msa0706660:CDS 50.0%
! ACAAATGGGGGAATGGTGGA+TGG + chr4_4:79676045-79676064 Msa0706660:CDS 50.0%
TTGTTCGGAAGCTGTGGTAG+TGG - chr4_4:79676107-79676126 None:intergenic 50.0%
ATTGGAGGGCGGAAAATGAG+CGG + chr4_4:79676140-79676159 Msa0706660:CDS 50.0%
AAGGATTACTGGGCCAGACA+TGG + chr4_4:79676233-79676252 Msa0706660:CDS 50.0%
TGCTTGAGTTTAGCGCATGC+AGG + chr4_4:79676376-79676395 Msa0706660:three_prime_UTR 50.0%
AAACATGACACGGGTGAGGA+AGG + chr4_4:79672571-79672590 Msa0706660:five_prime_UTR 50.0%
TCTCTCTCTCTCTCTCTCTC+TGG + chr4_4:79672614-79672633 Msa0706660:five_prime_UTR 50.0%
CGAGGGCAGTACCAAATAAG+AGG - chr4_4:79673135-79673154 None:intergenic 50.0%
! CACTTACTTAGGGTGCTCGA+GGG - chr4_4:79673152-79673171 None:intergenic 50.0%
GCACCCTAAGTAAGTGGTCA+TGG + chr4_4:79673156-79673175 Msa0706660:intron 50.0%
ATTCTCCTCTCCAGACAGTC+GGG - chr4_4:79673189-79673208 None:intergenic 50.0%
GATTCTCCTCTCCAGACAGT+CGG - chr4_4:79673190-79673209 None:intergenic 50.0%
CACGGTGAAACCTTAGCTGA+TGG - chr4_4:79673297-79673316 None:intergenic 50.0%
CTAGGGATGTCATACCCAGT+AGG + chr4_4:79674156-79674175 Msa0706660:intron 50.0%
ACATATATGGTCCTGCGGGT+GGG - chr4_4:79674551-79674570 None:intergenic 50.0%
GTTTGTTTGGGCCAGAATGG+AGG + chr4_4:79674864-79674883 Msa0706660:intron 50.0%
ATCGTCCATCTTGCATCCAG+AGG - chr4_4:79675239-79675258 None:intergenic 50.0%
GTCCATTATGGCTGAAAGGC+AGG + chr4_4:79675479-79675498 Msa0706660:CDS 50.0%
TGCCTGCCTTTCAGCCATAA+TGG - chr4_4:79675484-79675503 None:intergenic 50.0%
! GGATGAAGCACTTGCTCAGA+GGG + chr4_4:79675587-79675606 Msa0706660:CDS 50.0%
CTCTTGCAGCCCTTCAAAGT+CGG + chr4_4:79675637-79675656 Msa0706660:CDS 50.0%
TGAAGAATGGTGCATCCGCT+TGG - chr4_4:79675709-79675728 None:intergenic 50.0%
GAATGGGATAGGCAGGATGT+TGG + chr4_4:79675945-79675964 Msa0706660:CDS 50.0%
CTCCAGTACACGTGCAAACT+GGG - chr4_4:79676010-79676029 None:intergenic 50.0%
ACTCCAGTACACGTGCAAAC+TGG - chr4_4:79676011-79676030 None:intergenic 50.0%
CCACGACAGTGCTACAAATG+GGG + chr4_4:79676032-79676051 Msa0706660:CDS 50.0%
CACGACAGTGCTACAAATGG+GGG + chr4_4:79676033-79676052 Msa0706660:CDS 50.0%
CAGTGCTACAAATGGGGGAA+TGG + chr4_4:79676038-79676057 Msa0706660:CDS 50.0%
TGCTACAAATGGGGGAATGG+TGG + chr4_4:79676041-79676060 Msa0706660:CDS 50.0%
! ACAAATGGGGGAATGGTGGA+TGG + chr4_4:79676045-79676064 Msa0706660:CDS 50.0%
TTGTTCGGAAGCTGTGGTAG+TGG - chr4_4:79676107-79676126 None:intergenic 50.0%
ATTGGAGGGCGGAAAATGAG+CGG + chr4_4:79676140-79676159 Msa0706660:CDS 50.0%
AAGGATTACTGGGCCAGACA+TGG + chr4_4:79676233-79676252 Msa0706660:CDS 50.0%
TGCTTGAGTTTAGCGCATGC+AGG + chr4_4:79676376-79676395 Msa0706660:three_prime_UTR 50.0%
ATGACACGGGTGAGGAAGGA+AGG + chr4_4:79672575-79672594 Msa0706660:five_prime_UTR 55.0%
! CCACTTACTTAGGGTGCTCG+AGG - chr4_4:79673153-79673172 None:intergenic 55.0%
CCTCGAGCACCCTAAGTAAG+TGG + chr4_4:79673150-79673169 Msa0706660:intron 55.0%
TGGGTTCAATCCCGACTGTC+TGG + chr4_4:79673176-79673195 Msa0706660:intron 55.0%
TCAATCCCGACTGTCTGGAG+AGG + chr4_4:79673181-79673200 Msa0706660:intron 55.0%
ATATATGGTCCTGCGGGTGG+GGG - chr4_4:79674549-79674568 None:intergenic 55.0%
CATATATGGTCCTGCGGGTG+GGG - chr4_4:79674550-79674569 None:intergenic 55.0%
CACATATATGGTCCTGCGGG+TGG - chr4_4:79674552-79674571 None:intergenic 55.0%
! CTACAGAGGAGCACATTCCC+TGG + chr4_4:79675297-79675316 Msa0706660:CDS 55.0%
TGCTTCATCCCTCTGCCGAA+GGG - chr4_4:79675577-79675596 None:intergenic 55.0%
! GGGATGAAGCACTTGCTCAG+AGG + chr4_4:79675586-79675605 Msa0706660:CDS 55.0%
GTACACGTGCAAACTGGGAC+AGG - chr4_4:79676005-79676024 None:intergenic 55.0%
GTCCCAGTTTGCACGTGTAC+TGG + chr4_4:79676005-79676024 Msa0706660:CDS 55.0%
CCCCATTTGTAGCACTGTCG+TGG - chr4_4:79676035-79676054 None:intergenic 55.0%
ATGCGAGCATGGCGCTTGTT+CGG - chr4_4:79676122-79676141 None:intergenic 55.0%
AACAAGCGCCATGCTCGCAT+TGG + chr4_4:79676122-79676141 Msa0706660:CDS 55.0%
ATGACACGGGTGAGGAAGGA+AGG + chr4_4:79672575-79672594 Msa0706660:five_prime_UTR 55.0%
! CCACTTACTTAGGGTGCTCG+AGG - chr4_4:79673153-79673172 None:intergenic 55.0%
CCTCGAGCACCCTAAGTAAG+TGG + chr4_4:79673150-79673169 Msa0706660:intron 55.0%
TGGGTTCAATCCCGACTGTC+TGG + chr4_4:79673176-79673195 Msa0706660:intron 55.0%
TCAATCCCGACTGTCTGGAG+AGG + chr4_4:79673181-79673200 Msa0706660:intron 55.0%
ATATATGGTCCTGCGGGTGG+GGG - chr4_4:79674549-79674568 None:intergenic 55.0%
CATATATGGTCCTGCGGGTG+GGG - chr4_4:79674550-79674569 None:intergenic 55.0%
CACATATATGGTCCTGCGGG+TGG - chr4_4:79674552-79674571 None:intergenic 55.0%
! CTACAGAGGAGCACATTCCC+TGG + chr4_4:79675297-79675316 Msa0706660:CDS 55.0%
TGCTTCATCCCTCTGCCGAA+GGG - chr4_4:79675577-79675596 None:intergenic 55.0%
! GGGATGAAGCACTTGCTCAG+AGG + chr4_4:79675586-79675605 Msa0706660:CDS 55.0%
GTACACGTGCAAACTGGGAC+AGG - chr4_4:79676005-79676024 None:intergenic 55.0%
GTCCCAGTTTGCACGTGTAC+TGG + chr4_4:79676005-79676024 Msa0706660:CDS 55.0%
CCCCATTTGTAGCACTGTCG+TGG - chr4_4:79676035-79676054 None:intergenic 55.0%
ATGCGAGCATGGCGCTTGTT+CGG - chr4_4:79676122-79676141 None:intergenic 55.0%
AACAAGCGCCATGCTCGCAT+TGG + chr4_4:79676122-79676141 Msa0706660:CDS 55.0%
TATATGGTCCTGCGGGTGGG+GGG - chr4_4:79674548-79674567 None:intergenic 60.0%
CTGCTCGAGACGTAGCCCTT+CGG + chr4_4:79675559-79675578 Msa0706660:CDS 60.0%
AGACGTAGCCCTTCGGCAGA+GGG + chr4_4:79675566-79675585 Msa0706660:CDS 60.0%
GTGCTTCATCCCTCTGCCGA+AGG - chr4_4:79675578-79675597 None:intergenic 60.0%
TGGCGCTTGTTCGGAAGCTG+TGG - chr4_4:79676113-79676132 None:intergenic 60.0%
AAGCGCCATGCTCGCATTGG+AGG + chr4_4:79676125-79676144 Msa0706660:CDS 60.0%
AGCGCCATGCTCGCATTGGA+GGG + chr4_4:79676126-79676145 Msa0706660:CDS 60.0%
TATATGGTCCTGCGGGTGGG+GGG - chr4_4:79674548-79674567 None:intergenic 60.0%
CTGCTCGAGACGTAGCCCTT+CGG + chr4_4:79675559-79675578 Msa0706660:CDS 60.0%
AGACGTAGCCCTTCGGCAGA+GGG + chr4_4:79675566-79675585 Msa0706660:CDS 60.0%
GTGCTTCATCCCTCTGCCGA+AGG - chr4_4:79675578-79675597 None:intergenic 60.0%
TGGCGCTTGTTCGGAAGCTG+TGG - chr4_4:79676113-79676132 None:intergenic 60.0%
AAGCGCCATGCTCGCATTGG+AGG + chr4_4:79676125-79676144 Msa0706660:CDS 60.0%
AGCGCCATGCTCGCATTGGA+GGG + chr4_4:79676126-79676145 Msa0706660:CDS 60.0%
GGCTACGTCTCGAGCAGCCA+GGG - chr4_4:79675556-79675575 None:intergenic 65.0%
GAGACGTAGCCCTTCGGCAG+AGG + chr4_4:79675565-79675584 Msa0706660:CDS 65.0%
GCCATGCTCGCATTGGAGGG+CGG + chr4_4:79676129-79676148 Msa0706660:CDS 65.0%
TCCGCCCTCCAATGCGAGCA+TGG - chr4_4:79676133-79676152 None:intergenic 65.0%
GGCTACGTCTCGAGCAGCCA+GGG - chr4_4:79675556-79675575 None:intergenic 65.0%
GAGACGTAGCCCTTCGGCAG+AGG + chr4_4:79675565-79675584 Msa0706660:CDS 65.0%
GCCATGCTCGCATTGGAGGG+CGG + chr4_4:79676129-79676148 Msa0706660:CDS 65.0%
TCCGCCCTCCAATGCGAGCA+TGG - chr4_4:79676133-79676152 None:intergenic 65.0%
AACACAAGCCCCCCACCCGC+AGG + chr4_4:79674537-79674556 Msa0706660:intron 70.0%
GGGCTACGTCTCGAGCAGCC+AGG - chr4_4:79675557-79675576 None:intergenic 70.0%
AACACAAGCCCCCCACCCGC+AGG + chr4_4:79674537-79674556 Msa0706660:intron 70.0%
GGGCTACGTCTCGAGCAGCC+AGG - chr4_4:79675557-79675576 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 79672568 79676656 79672568 ID=Msa0706660;Name=Msa0706660
chr4_4 mRNA 79672568 79676656 79672568 ID=Msa0706660-mRNA-1;Parent=Msa0706660;Name=Msa0706660-mRNA-1;_AED=0.16;_eAED=0.16;_QI=195|1|1|1|0.5|0.33|3|373|312
chr4_4 exon 79672568 79672667 79672568 ID=Msa0706660-mRNA-1:exon:25693;Parent=Msa0706660-mRNA-1
chr4_4 exon 79675155 79675318 79675155 ID=Msa0706660-mRNA-1:exon:25694;Parent=Msa0706660-mRNA-1
chr4_4 exon 79675414 79676656 79675414 ID=Msa0706660-mRNA-1:exon:25695;Parent=Msa0706660-mRNA-1
chr4_4 five_prime_UTR 79672568 79672667 79672568 ID=Msa0706660-mRNA-1:five_prime_utr;Parent=Msa0706660-mRNA-1
chr4_4 five_prime_UTR 79675155 79675249 79675155 ID=Msa0706660-mRNA-1:five_prime_utr;Parent=Msa0706660-mRNA-1
chr4_4 CDS 79675250 79675318 79675250 ID=Msa0706660-mRNA-1:cds;Parent=Msa0706660-mRNA-1
chr4_4 CDS 79675414 79676283 79675414 ID=Msa0706660-mRNA-1:cds;Parent=Msa0706660-mRNA-1
chr4_4 three_prime_UTR 79676284 79676656 79676284 ID=Msa0706660-mRNA-1:three_prime_utr;Parent=Msa0706660-mRNA-1
Gene Sequence

>Msa0706660

ATGGACGATGACCGCCAATATGAAAACGGTAGGCATAAGATGGACTACTACAGAGGAGCACATTCCCTGTGGAATGTGGATCCCCAGCATCAAATAAAGGAACAAAATGCCCTAGTTATGAATAAAAAAATTAGGTCCATTATGGCTGAAAGGCAGGCAGCTCTTCTTGAACTTGAACTAGAGGCTGCTATATCTGAAAAGAATGAAGCCCTGGCTGCTCGAGACGTAGCCCTTCGGCAGAGGGATGAAGCACTTGCTCAGAGGGATAATGCTCTACTGGAACGGGACAATGCTCTTGCAGCCCTTCAAAGTCGGAATAGTACTGGCAACTTTCCATTCAATGGTGGAATTCAACGTGGATCCAAGCGGATGCACCATTCTTCAAACCATATATCCAACATGACAGAAGCAGCATATAGCACGACGGATATAATAATAAGAGATGCCTCCCCAGTTACTGTTATAACTTCTGAAGATGTCAAATCTCATCTAACTAAGAGAATAAAGGAGAACAAAGCATCACAGACACCTACCAAAATAAAGAAAATGGGCGAGGATTTAAATAGGAAGGCTTATTCTGAAGGGACAAAGATCAAATCTGAATGGGATAGGCAGGATGTTGGCTTGAATTTGATTGCTTTCGATGAAACTGTGATGCCTGTCCCAGTTTGCACGTGTACTGGAGTACCACGACAGTGCTACAAATGGGGGAATGGTGGATGGCAATCATCTTGTTGTACCACTACATTGTCAATGCATCCACTACCACAGCTTCCGAACAAGCGCCATGCTCGCATTGGAGGGCGGAAAATGAGCGGCAATGTTTTTAGACGACTTCTCAGTAGGTTTGCATCAGAAGGCCATGATTTATCTATACCATTGGATCTTAAGGATTACTGGGCCAGACATGGAACAAATCGTTACATTACTATCAAGTAG
Protein sequence

>Msa0706660

MDDDRQYENGRHKMDYYRGAHSLWNVDPQHQIKEQNALVMNKKIRSIMAERQAALLELELEAAISEKNEALAARDVALRQRDEALAQRDNALLERDNALAALQSRNSTGNFPFNGGIQRGSKRMHHSSNHISNMTEAAYSTTDIIIRDASPVTVITSEDVKSHLTKRIKENKASQTPTKIKKMGEDLNRKAYSEGTKIKSEWDRQDVGLNLIAFDETVMPVPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSMHPLPQLPNKRHARIGGRKMSGNVFRRLLSRFASEGHDLSIPLDLKDYWARHGTNRYITIK*