AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0706620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0706620 MtrunA17_Chr8g0385961 99.359 312 2 0 1 312 1 312 0.0 653
Msa0706620 MtrunA17_Chr1g0156031 49.425 348 129 11 3 312 2 340 8.79e-106 312
Msa0706620 MtrunA17_Chr6g0479911 52.336 107 51 0 206 312 183 289 4.85e-43 149
Msa0706620 MtrunA17_Chr8g0375531 53.846 104 48 0 209 312 177 280 1.29e-39 140
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0706620 AT2G21240.1 58.280 314 111 5 1 312 1 296 1.52e-127 366
Msa0706620 AT2G21240.2 58.280 314 111 5 1 312 1 296 1.52e-127 366
Msa0706620 AT4G38910.2 54.808 312 112 6 1 312 1 283 1.66e-114 332
Msa0706620 AT4G38910.1 56.228 281 96 5 33 312 4 258 2.93e-104 305
Msa0706620 AT5G42520.2 47.899 357 122 11 1 312 1 338 1.82e-90 273
Msa0706620 AT5G42520.1 47.899 357 126 12 1 312 1 342 2.89e-90 273
Msa0706620 AT5G42520.3 49.291 282 98 8 76 312 1 282 8.52e-77 236
Msa0706620 AT2G35550.2 45.806 155 77 1 165 312 72 226 1.59e-45 154
Msa0706620 AT2G35550.4 45.806 155 77 1 165 312 72 226 1.59e-45 154
Msa0706620 AT2G35550.3 45.806 155 77 1 165 312 72 226 1.59e-45 154
Msa0706620 AT2G35550.1 45.806 155 77 1 165 312 117 271 2.50e-45 155
Msa0706620 AT1G14685.1 52.137 117 56 0 196 312 163 279 3.44e-44 152
Msa0706620 AT1G14685.4 52.137 117 56 0 196 312 163 279 3.44e-44 152
Msa0706620 AT1G14685.3 52.137 117 56 0 196 312 163 279 3.44e-44 152
Msa0706620 AT1G14685.2 52.137 117 56 0 196 312 163 279 3.44e-44 152
Msa0706620 AT1G68120.1 55.769 104 46 0 209 312 166 269 1.18e-41 145
Msa0706620 AT2G01930.2 52.336 107 51 0 206 312 177 283 6.83e-41 144
Msa0706620 AT2G01930.1 52.336 107 51 0 206 312 177 283 6.83e-41 144

Find 115 sgRNAs with CRISPR-Local

Find 620 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGTTTATTTCTAGTTAC+TGG 0.160666 4_4:+79628748 Msa0706620:three_prime_UTR
ACCTACCAAAATAAAGAAAA+TGG 0.208626 4_4:+79628194 Msa0706620:CDS
CTTCTGTCATGTTGGATATA+TGG 0.216505 4_4:-79628053 None:intergenic
ATCTATACCATTGGATCTTA+AGG 0.242442 4_4:+79628536 Msa0706620:CDS
TTACAGCAATCGCATTTAAA+AGG 0.255052 4_4:-79628793 None:intergenic
TCAGAAGTTATAACAGTAAC+TGG 0.272157 4_4:-79628117 None:intergenic
CATTGGATCTTAAGGATTAC+TGG 0.283657 4_4:+79628544 Msa0706620:CDS
GATTAGTAATGTACAGAAAA+AGG 0.297885 4_4:-79628880 None:intergenic
TTTGTTCCTTTATTTGATGC+TGG 0.301136 4_4:-79627750 None:intergenic
TGGTGATAGGCGGTCTAAAA+AGG 0.310805 4_4:-79628640 None:intergenic
TTGCAACAGATGCGGTAAAT+TGG 0.345909 4_4:-79627532 None:intergenic
ACTCCAGTACACGTGCAAAC+TGG 0.357093 4_4:-79628330 None:intergenic
TTGTTCCTTTATTTGATGCT+GGG 0.361945 4_4:-79627749 None:intergenic
AAATGGGCGAGGATTTAAAT+AGG 0.362648 4_4:+79628211 Msa0706620:CDS
TCTACATTTATAAAATTCAA+TGG 0.388885 4_4:+79628946 Msa0706620:three_prime_UTR
CTACATTTATAAAATTCAAT+GGG 0.390303 4_4:+79628947 Msa0706620:three_prime_UTR
GTAACGATTTGTTCCATGTC+TGG 0.409057 4_4:-79628568 None:intergenic
GTCCCAGTTTGCACGTGTAC+TGG 0.410401 4_4:+79628327 Msa0706620:CDS
CGTTGAATTCCACCATTGAA+TGG 0.413813 4_4:-79628000 None:intergenic
CAGTACTATTCCGACTTTGA+AGG 0.424329 4_4:-79627969 None:intergenic
ATGCGAGCATGGCGCTTGTT+CGG 0.428637 4_4:-79628441 None:intergenic
TGCCTGCCTTTCAGCCATAA+TGG 0.435049 4_4:-79627803 None:intergenic
ACCACGACAGTGCTACAAAT+GGG 0.437083 4_4:+79628353 Msa0706620:CDS
AAGCGCCATGCTCGCATTGG+AGG 0.439433 4_4:+79628447 Msa0706620:CDS
GGATCCCCAGCATCAAATAA+AGG 0.448615 4_4:+79627744 Msa0706620:CDS
GGATAATGCTCTACTGGAAC+GGG 0.450868 4_4:+79627930 Msa0706620:CDS
AGTAACTAGAAATAAACAAA+GGG 0.452868 4_4:-79628746 None:intergenic
CTCCAGTACACGTGCAAACT+GGG 0.457013 4_4:-79628329 None:intergenic
ACTGGCAACTTTCCATTCAA+TGG 0.459914 4_4:+79627988 Msa0706620:CDS
ATCTGAAAAGAATGAAGCCC+TGG 0.461756 4_4:+79627858 Msa0706620:CDS
GCATCTGTTGCAAAATCCTC+TGG 0.471306 4_4:+79627542 Msa0706620:five_prime_UTR
GACAAAGATCAAATCTGAAT+GGG 0.471460 4_4:+79628251 Msa0706620:CDS
GTGCTTCATCCCTCTGCCGA+AGG 0.475401 4_4:-79627897 None:intergenic
CAAATCTGAATGGGATAGGC+AGG 0.475987 4_4:+79628260 Msa0706620:CDS
GTCCATTATGGCTGAAAGGC+AGG 0.476045 4_4:+79627801 Msa0706620:CDS
CCATGATTTATCTATACCAT+TGG 0.476445 4_4:+79628527 Msa0706620:CDS
GGACAAAGATCAAATCTGAA+TGG 0.478623 4_4:+79628250 Msa0706620:CDS
TGGATATATGGTTTGAAGAA+TGG 0.483617 4_4:-79628041 None:intergenic
AACAAGCGCCATGCTCGCAT+TGG 0.488361 4_4:+79628444 Msa0706620:CDS
TCCGCCCTCCAATGCGAGCA+TGG 0.489587 4_4:-79628452 None:intergenic
ACTCGAAACAAATGAATGTC+AGG 0.491577 4_4:-79628609 None:intergenic
CCTACCAAAATAAAGAAAAT+GGG 0.492634 4_4:+79628195 Msa0706620:CDS
TGAAGAATGGTGCATCCGCT+TGG 0.493558 4_4:-79628028 None:intergenic
TACCACGACAGTGCTACAAA+TGG 0.496139 4_4:+79628352 Msa0706620:CDS
AATAGGAAGGCTTATTCTGA+AGG 0.504268 4_4:+79628228 Msa0706620:CDS
TGCTTGAGTTTAGCGCATGC+AGG 0.511532 4_4:+79628698 Msa0706620:three_prime_UTR
CTCAGTAGGTTTGCATCAGA+AGG 0.511971 4_4:+79628504 Msa0706620:CDS
TGAAAACGGTAGGCATAAGA+TGG 0.514492 4_4:+79627592 Msa0706620:CDS
AGCGCCATGCTCGCATTGGA+GGG 0.517752 4_4:+79628448 Msa0706620:CDS
TCAGAGGGATAATGCTCTAC+TGG 0.518249 4_4:+79627924 Msa0706620:CDS
GGGCTACGTCTCGAGCAGCC+AGG 0.518686 4_4:-79627876 None:intergenic
CTTCAAAGTCGGAATAGTAC+TGG 0.519466 4_4:+79627970 Msa0706620:CDS
TGTTCCTTTATTTGATGCTG+GGG 0.520374 4_4:-79627748 None:intergenic
AGTACTATTCCGACTTTGAA+GGG 0.520694 4_4:-79627968 None:intergenic
GGATGAAGCACTTGCTCAGA+GGG 0.522036 4_4:+79627909 Msa0706620:CDS
ATATGCTGCTTCTGTCATGT+TGG 0.532878 4_4:-79628061 None:intergenic
AGATCAAATCTGAATGGGAT+AGG 0.533258 4_4:+79628256 Msa0706620:CDS
TTGTTCGGAAGCTGTGGTAG+TGG 0.541295 4_4:-79628426 None:intergenic
CAAAATAAAGAAAATGGGCG+AGG 0.545395 4_4:+79628200 Msa0706620:CDS
GAGACGTAGCCCTTCGGCAG+AGG 0.546456 4_4:+79627887 Msa0706620:CDS
CCAATGGTATAGATAAATCA+TGG 0.547636 4_4:-79628527 None:intergenic
GGCTACGTCTCGAGCAGCCA+GGG 0.552588 4_4:-79627875 None:intergenic
CCCCATTTGTAGCACTGTCG+TGG 0.555932 4_4:-79628354 None:intergenic
ATTGGTCTCAAGAAGTCTTG+AGG 0.556886 4_4:-79627514 None:intergenic
CAGAAGTTATAACAGTAACT+GGG 0.557616 4_4:-79628116 None:intergenic
TTTAAATGTGCAGTGGAATG+TGG 0.558628 4_4:+79627723 Msa0706620:intron
CTGCTCGAGACGTAGCCCTT+CGG 0.563490 4_4:+79627881 Msa0706620:CDS
CTACAGAGGAGCACATTCCC+TGG 0.565304 4_4:+79627619 Msa0706620:CDS
AGACGTAGCCCTTCGGCAGA+GGG 0.565616 4_4:+79627888 Msa0706620:CDS
AGAACTTACAGCTACAGAAA+CGG 0.566961 4_4:-79624964 None:intergenic
ATGACACGGGTGAGGAAGGA+AGG 0.569855 4_4:+79624883 Msa0706620:five_prime_UTR
GGGCGAGGATTTAAATAGGA+AGG 0.570874 4_4:+79628215 Msa0706620:CDS
CTCTTGCAGCCCTTCAAAGT+CGG 0.574408 4_4:+79627959 Msa0706620:CDS
AAGGATTACTGGGCCAGACA+TGG 0.576589 4_4:+79628555 Msa0706620:CDS
GCCATGCTCGCATTGGAGGG+CGG 0.577730 4_4:+79628451 Msa0706620:CDS
TGCTTCATCCCTCTGCCGAA+GGG 0.577861 4_4:-79627896 None:intergenic
CTGTAATCAAAACCATGCCT+TGG 0.580020 4_4:+79628664 Msa0706620:three_prime_UTR
GGGATAATGCTCTACTGGAA+CGG 0.583003 4_4:+79627929 Msa0706620:CDS
AAACATGACACGGGTGAGGA+AGG 0.583722 4_4:+79624879 Msa0706620:five_prime_UTR
GTACACGTGCAAACTGGGAC+AGG 0.585669 4_4:-79628324 None:intergenic
ATAGGAAGGCTTATTCTGAA+GGG 0.587900 4_4:+79628229 Msa0706620:CDS
ATTGGATCTTAAGGATTACT+GGG 0.588784 4_4:+79628545 Msa0706620:CDS
TCTTCTTGAACTTGAACTAG+AGG 0.590105 4_4:+79627828 Msa0706620:CDS
TTAGGTCCATTATGGCTGAA+AGG 0.590519 4_4:+79627797 Msa0706620:CDS
GATGACCGCCAATATGAAAA+CGG 0.592001 4_4:+79627578 Msa0706620:CDS
ATATCTTGCTGACCAAGGCA+TGG 0.593773 4_4:-79628676 None:intergenic
GAATGGGATAGGCAGGATGT+TGG 0.593838 4_4:+79628267 Msa0706620:CDS
CAGTAATCCTTAAGATCCAA+TGG 0.595456 4_4:-79628543 None:intergenic
AAAATCCTCTGGATGCAAGA+TGG 0.605878 4_4:+79627553 Msa0706620:exon
GGCAACTTTCCATTCAATGG+TGG 0.607937 4_4:+79627991 Msa0706620:CDS
TGGCGCTTGTTCGGAAGCTG+TGG 0.609294 4_4:-79628432 None:intergenic
TGATTACAGCTGGTGATAGG+CGG 0.611104 4_4:-79628650 None:intergenic
GGGAAAACATGACACGGGTG+AGG 0.613798 4_4:+79624875 None:intergenic
CCACGACAGTGCTACAAATG+GGG 0.618535 4_4:+79628354 Msa0706620:CDS
ATCGTCCATCTTGCATCCAG+AGG 0.621489 4_4:-79627558 None:intergenic
CAGTAACTAGAAATAAACAA+AGG 0.621529 4_4:-79628747 None:intergenic
CATAAGATGGACTACTACAG+AGG 0.628336 4_4:+79627605 Msa0706620:CDS
CAAGCATATCTTGCTGACCA+AGG 0.631537 4_4:-79628681 None:intergenic
ATTGGAGGGCGGAAAATGAG+CGG 0.633747 4_4:+79628462 Msa0706620:CDS
AACTAGAAATAAACAAAGGG+GGG 0.635667 4_4:-79628743 None:intergenic
TACATTTATAAAATTCAATG+GGG 0.636608 4_4:+79628948 Msa0706620:three_prime_UTR
TAACTAGAAATAAACAAAGG+GGG 0.640263 4_4:-79628744 None:intergenic
TCATCTAACTAAGAGAACAA+AGG 0.650253 4_4:+79628152 Msa0706620:CDS
CACGACAGTGCTACAAATGG+GGG 0.651085 4_4:+79628355 Msa0706620:CDS
ACCGCCAATATGAAAACGGT+AGG 0.665966 4_4:+79627582 Msa0706620:CDS
GGGATGAAGCACTTGCTCAG+AGG 0.669930 4_4:+79627908 Msa0706620:CDS
AGTTATAACAGTAACTGGGG+AGG 0.670600 4_4:-79628112 None:intergenic
TGGGAAGGGAAAACATGACA+CGG 0.674207 4_4:+79624869 None:intergenic
AGAAGTTATAACAGTAACTG+GGG 0.682187 4_4:-79628115 None:intergenic
GTAACTAGAAATAAACAAAG+GGG 0.686632 4_4:-79628745 None:intergenic
GGGAAGGGAAAACATGACAC+GGG 0.699552 4_4:+79624870 None:intergenic
TGGATGCATTGACAATGTAG+TGG 0.702687 4_4:-79628406 None:intergenic
GAATTCAACGTGGATCCAAG+CGG 0.708406 4_4:+79628013 Msa0706620:CDS
TTCAATGGTGGAATTCAACG+TGG 0.712678 4_4:+79628003 Msa0706620:CDS
AGAAGCAGCATATAGCACGA+CGG 0.752304 4_4:+79628071 Msa0706620:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTTTATTCATAACTA+GGG - chr4_4:79627779-79627798 None:intergenic 10.0%
!!! TAATTTTTTTATTCATAACT+AGG - chr4_4:79627780-79627799 None:intergenic 10.0%
!! TAGTTATGAATAAAAAAATT+AGG + chr4_4:79627779-79627798 Msa0706620:CDS 10.0%
!! TATAAATGTAGAAAAATAAA+GGG - chr4_4:79628938-79628957 None:intergenic 10.0%
!! TTATAAATGTAGAAAAATAA+AGG - chr4_4:79628939-79628958 None:intergenic 10.0%
!!! AATTTTTTTATTCATAACTA+GGG - chr4_4:79627779-79627798 None:intergenic 10.0%
!!! TAATTTTTTTATTCATAACT+AGG - chr4_4:79627780-79627799 None:intergenic 10.0%
!! TAGTTATGAATAAAAAAATT+AGG + chr4_4:79627779-79627798 Msa0706620:CDS 10.0%
!! TATAAATGTAGAAAAATAAA+GGG - chr4_4:79628938-79628957 None:intergenic 10.0%
!! TTATAAATGTAGAAAAATAA+AGG - chr4_4:79628939-79628958 None:intergenic 10.0%
!! GAATAATAAAAATGGTAATT+GGG - chr4_4:79625061-79625080 None:intergenic 15.0%
!! AGAATAATAAAAATGGTAAT+TGG - chr4_4:79625062-79625081 None:intergenic 15.0%
!! TAATTATGAGAATTTACAAT+AGG + chr4_4:79625600-79625619 Msa0706620:intron 15.0%
!! AAAAAAACTATTTAAGGAAA+GGG - chr4_4:79626136-79626155 None:intergenic 15.0%
!! AAAAAAAACTATTTAAGGAA+AGG - chr4_4:79626137-79626156 None:intergenic 15.0%
!! TAATGTTAAAGACATATATA+TGG - chr4_4:79626678-79626697 None:intergenic 15.0%
!! TACAACTAATAAATTAAACT+TGG - chr4_4:79627343-79627362 None:intergenic 15.0%
!! TTTAAAAAATCAATAATCTC+TGG - chr4_4:79627494-79627513 None:intergenic 15.0%
!! TCTACATTTATAAAATTCAA+TGG + chr4_4:79628946-79628965 Msa0706620:three_prime_UTR 15.0%
!! CTACATTTATAAAATTCAAT+GGG + chr4_4:79628947-79628966 Msa0706620:three_prime_UTR 15.0%
!! TACATTTATAAAATTCAATG+GGG + chr4_4:79628948-79628967 Msa0706620:three_prime_UTR 15.0%
!! GAATAATAAAAATGGTAATT+GGG - chr4_4:79625061-79625080 None:intergenic 15.0%
!! AGAATAATAAAAATGGTAAT+TGG - chr4_4:79625062-79625081 None:intergenic 15.0%
!! TAATTATGAGAATTTACAAT+AGG + chr4_4:79625600-79625619 Msa0706620:intron 15.0%
!! AAAAAAACTATTTAAGGAAA+GGG - chr4_4:79626136-79626155 None:intergenic 15.0%
!! AAAAAAAACTATTTAAGGAA+AGG - chr4_4:79626137-79626156 None:intergenic 15.0%
!! TAATGTTAAAGACATATATA+TGG - chr4_4:79626678-79626697 None:intergenic 15.0%
!! TACAACTAATAAATTAAACT+TGG - chr4_4:79627343-79627362 None:intergenic 15.0%
!! TTTAAAAAATCAATAATCTC+TGG - chr4_4:79627494-79627513 None:intergenic 15.0%
!! TCTACATTTATAAAATTCAA+TGG + chr4_4:79628946-79628965 Msa0706620:three_prime_UTR 15.0%
!! CTACATTTATAAAATTCAAT+GGG + chr4_4:79628947-79628966 Msa0706620:three_prime_UTR 15.0%
!! TACATTTATAAAATTCAATG+GGG + chr4_4:79628948-79628967 Msa0706620:three_prime_UTR 15.0%
!! GGTTTAGAGAATAATAAAAA+TGG - chr4_4:79625069-79625088 None:intergenic 20.0%
!! TTTCATTTATTCCTCTTATT+TGG + chr4_4:79625450-79625469 Msa0706620:intron 20.0%
!! AATTAGTCACTGTTAAATTA+CGG + chr4_4:79625555-79625574 Msa0706620:intron 20.0%
!! AAAAAACTTTCAATTCAACA+CGG - chr4_4:79625644-79625663 None:intergenic 20.0%
!! AATATAAGATATGTGTACAA+TGG + chr4_4:79626524-79626543 Msa0706620:intron 20.0%
!!! ATTTCTTTGTTATTGTAGTT+TGG - chr4_4:79627094-79627113 None:intergenic 20.0%
!! ACTACAGTTAAATGAAAAAA+TGG + chr4_4:79627134-79627153 Msa0706620:intron 20.0%
!!! TTGTAAAAAGATTTTCTACA+AGG + chr4_4:79627358-79627377 Msa0706620:intron 20.0%
!! TAAAAAAATTAGGTCCATTA+TGG + chr4_4:79627789-79627808 Msa0706620:CDS 20.0%
!! AGTAACTAGAAATAAACAAA+GGG - chr4_4:79628749-79628768 None:intergenic 20.0%
!! GGTTTAGAGAATAATAAAAA+TGG - chr4_4:79625069-79625088 None:intergenic 20.0%
!! TTTCATTTATTCCTCTTATT+TGG + chr4_4:79625450-79625469 Msa0706620:intron 20.0%
!! AATTAGTCACTGTTAAATTA+CGG + chr4_4:79625555-79625574 Msa0706620:intron 20.0%
!! AAAAAACTTTCAATTCAACA+CGG - chr4_4:79625644-79625663 None:intergenic 20.0%
!! AATATAAGATATGTGTACAA+TGG + chr4_4:79626524-79626543 Msa0706620:intron 20.0%
!!! ATTTCTTTGTTATTGTAGTT+TGG - chr4_4:79627094-79627113 None:intergenic 20.0%
!! ACTACAGTTAAATGAAAAAA+TGG + chr4_4:79627134-79627153 Msa0706620:intron 20.0%
!!! TTGTAAAAAGATTTTCTACA+AGG + chr4_4:79627358-79627377 Msa0706620:intron 20.0%
!! TAAAAAAATTAGGTCCATTA+TGG + chr4_4:79627789-79627808 Msa0706620:CDS 20.0%
!! AGTAACTAGAAATAAACAAA+GGG - chr4_4:79628749-79628768 None:intergenic 20.0%
! ATTACATTACCTAGAAACAA+AGG - chr4_4:79625090-79625109 None:intergenic 25.0%
!! TATTTGTATGTACTGATGAA+TGG + chr4_4:79625312-79625331 Msa0706620:intron 25.0%
! AGAATGATGTGATCAAAATT+TGG + chr4_4:79625411-79625430 Msa0706620:intron 25.0%
!!! GTGTTGAATTGAAAGTTTTT+TGG + chr4_4:79625643-79625662 Msa0706620:intron 25.0%
! TTGACATGAATAACTAGTAT+TGG - chr4_4:79625691-79625710 None:intergenic 25.0%
! AATACTAGTTATTCATGTCA+AGG + chr4_4:79625690-79625709 Msa0706620:intron 25.0%
!!! GATTGATAGTCATATTCTTT+TGG + chr4_4:79625715-79625734 Msa0706620:intron 25.0%
! CATATTAGAATTTGAGCTTA+GGG + chr4_4:79626965-79626984 Msa0706620:intron 25.0%
!! ACTTTACAAGTAGATTTTGT+GGG - chr4_4:79627002-79627021 None:intergenic 25.0%
!! TACTTTACAAGTAGATTTTG+TGG - chr4_4:79627003-79627022 None:intergenic 25.0%
! TCTTATATCAAAAGAAAGAC+CGG - chr4_4:79627261-79627280 None:intergenic 25.0%
! ACCTACCAAAATAAAGAAAA+TGG + chr4_4:79628194-79628213 Msa0706620:CDS 25.0%
! CCTACCAAAATAAAGAAAAT+GGG + chr4_4:79628195-79628214 Msa0706620:CDS 25.0%
! TAACTAGAAATAAACAAAGG+GGG - chr4_4:79628747-79628766 None:intergenic 25.0%
! GTAACTAGAAATAAACAAAG+GGG - chr4_4:79628748-79628767 None:intergenic 25.0%
! CAGTAACTAGAAATAAACAA+AGG - chr4_4:79628750-79628769 None:intergenic 25.0%
!!! CTTTGTTTATTTCTAGTTAC+TGG + chr4_4:79628748-79628767 Msa0706620:three_prime_UTR 25.0%
! CGCATTTAAAAGGATAAAAA+TGG - chr4_4:79628786-79628805 None:intergenic 25.0%
!! TTTTCTAGGTGGTTTTTATT+TGG + chr4_4:79628841-79628860 Msa0706620:three_prime_UTR 25.0%
! GATTAGTAATGTACAGAAAA+AGG - chr4_4:79628883-79628902 None:intergenic 25.0%
! ATTACATTACCTAGAAACAA+AGG - chr4_4:79625090-79625109 None:intergenic 25.0%
!! TATTTGTATGTACTGATGAA+TGG + chr4_4:79625312-79625331 Msa0706620:intron 25.0%
! AGAATGATGTGATCAAAATT+TGG + chr4_4:79625411-79625430 Msa0706620:intron 25.0%
!!! GTGTTGAATTGAAAGTTTTT+TGG + chr4_4:79625643-79625662 Msa0706620:intron 25.0%
! TTGACATGAATAACTAGTAT+TGG - chr4_4:79625691-79625710 None:intergenic 25.0%
! AATACTAGTTATTCATGTCA+AGG + chr4_4:79625690-79625709 Msa0706620:intron 25.0%
!!! GATTGATAGTCATATTCTTT+TGG + chr4_4:79625715-79625734 Msa0706620:intron 25.0%
! CATATTAGAATTTGAGCTTA+GGG + chr4_4:79626965-79626984 Msa0706620:intron 25.0%
!! ACTTTACAAGTAGATTTTGT+GGG - chr4_4:79627002-79627021 None:intergenic 25.0%
!! TACTTTACAAGTAGATTTTG+TGG - chr4_4:79627003-79627022 None:intergenic 25.0%
! TCTTATATCAAAAGAAAGAC+CGG - chr4_4:79627261-79627280 None:intergenic 25.0%
! ACCTACCAAAATAAAGAAAA+TGG + chr4_4:79628194-79628213 Msa0706620:CDS 25.0%
! CCTACCAAAATAAAGAAAAT+GGG + chr4_4:79628195-79628214 Msa0706620:CDS 25.0%
! TAACTAGAAATAAACAAAGG+GGG - chr4_4:79628747-79628766 None:intergenic 25.0%
! GTAACTAGAAATAAACAAAG+GGG - chr4_4:79628748-79628767 None:intergenic 25.0%
! CAGTAACTAGAAATAAACAA+AGG - chr4_4:79628750-79628769 None:intergenic 25.0%
!!! CTTTGTTTATTTCTAGTTAC+TGG + chr4_4:79628748-79628767 Msa0706620:three_prime_UTR 25.0%
! CGCATTTAAAAGGATAAAAA+TGG - chr4_4:79628786-79628805 None:intergenic 25.0%
!! TTTTCTAGGTGGTTTTTATT+TGG + chr4_4:79628841-79628860 Msa0706620:three_prime_UTR 25.0%
! GATTAGTAATGTACAGAAAA+AGG - chr4_4:79628883-79628902 None:intergenic 25.0%
ATGGTAATTGGGAAAATACA+GGG - chr4_4:79625050-79625069 None:intergenic 30.0%
AATGGTAATTGGGAAAATAC+AGG - chr4_4:79625051-79625070 None:intergenic 30.0%
! TTCTCTAAACCTTTGTTTCT+AGG + chr4_4:79625078-79625097 Msa0706620:intron 30.0%
AGAGAATTAAAGGGGAAAAA+AGG - chr4_4:79625211-79625230 None:intergenic 30.0%
AAAGAGAGAGAGAATTAAAG+GGG - chr4_4:79625219-79625238 None:intergenic 30.0%
GAAAGAGAGAGAGAATTAAA+GGG - chr4_4:79625220-79625239 None:intergenic 30.0%
! GTACATTTGGTGAAACAAAA+TGG - chr4_4:79625242-79625261 None:intergenic 30.0%
!! TTTTGTTTCACCAAATGTAC+AGG + chr4_4:79625242-79625261 Msa0706620:intron 30.0%
TTTGTTTCACCAAATGTACA+GGG + chr4_4:79625243-79625262 Msa0706620:intron 30.0%
GCTTTATGTGTAATAGTGTA+TGG + chr4_4:79625383-79625402 Msa0706620:intron 30.0%
AATTACGGTGGATATTTCAT+AGG + chr4_4:79625570-79625589 Msa0706620:intron 30.0%
ATATGCAATTGAAAGTCGAT+AGG - chr4_4:79625809-79625828 None:intergenic 30.0%
CAATTTATAAGTTGTGTCTC+TGG + chr4_4:79625943-79625962 Msa0706620:intron 30.0%
TACATCAAATAGAACCACAA+GGG - chr4_4:79626059-79626078 None:intergenic 30.0%
TTACATCAAATAGAACCACA+AGG - chr4_4:79626060-79626079 None:intergenic 30.0%
TGTCCAGCTTATATTTGAAA+AGG + chr4_4:79626351-79626370 Msa0706620:intron 30.0%
GTCCAGCTTATATTTGAAAA+GGG + chr4_4:79626352-79626371 Msa0706620:intron 30.0%
TGTATTTGTGTCAAGTTCTA+GGG - chr4_4:79626457-79626476 None:intergenic 30.0%
TTCTAAATACATCACCTACT+GGG - chr4_4:79626495-79626514 None:intergenic 30.0%
GGTGATGTATTTAGAAGATT+TGG + chr4_4:79626499-79626518 Msa0706620:intron 30.0%
TATAGCCTACAAATGTAGTA+AGG + chr4_4:79626618-79626637 Msa0706620:intron 30.0%
AAAGTCCTTACTACATTTGT+AGG - chr4_4:79626626-79626645 None:intergenic 30.0%
! ACTTCACAAATTGATTCTGT+GGG - chr4_4:79626773-79626792 None:intergenic 30.0%
ACAGAATCAATTTGTGAAGT+GGG + chr4_4:79626773-79626792 Msa0706620:intron 30.0%
AAGTAGAGCTTATAAAGCTT+GGG - chr4_4:79626804-79626823 None:intergenic 30.0%
TAAGTAGAGCTTATAAAGCT+TGG - chr4_4:79626805-79626824 None:intergenic 30.0%
! AAGCTTTATAAGCTCTACTT+AGG + chr4_4:79626804-79626823 Msa0706620:intron 30.0%
ATATATATCTCTAGTCGAAG+TGG + chr4_4:79626829-79626848 Msa0706620:intron 30.0%
TATATATCTCTAGTCGAAGT+GGG + chr4_4:79626830-79626849 Msa0706620:intron 30.0%
! TTTTCCAGACTTCACATATA+TGG - chr4_4:79626886-79626905 None:intergenic 30.0%
CCTAAGCTCAAATTCTAATA+TGG - chr4_4:79626967-79626986 None:intergenic 30.0%
CCATATTAGAATTTGAGCTT+AGG + chr4_4:79626964-79626983 Msa0706620:intron 30.0%
TTTAAGTGTTCCACATTCAT+TGG - chr4_4:79627067-79627086 None:intergenic 30.0%
TGTAGTTTCTGTACACAAAA+AGG - chr4_4:79627120-79627139 None:intergenic 30.0%
GATGCATACAGTCATTAATA+TGG + chr4_4:79627156-79627175 Msa0706620:intron 30.0%
CAGTTCTATACAAGTTTAAC+CGG + chr4_4:79627239-79627258 Msa0706620:intron 30.0%
!!! AATTTTTTGGAAGGAACAAC+AGG - chr4_4:79627387-79627406 None:intergenic 30.0%
!! TGCTTTTCTCATTTGTTAAC+AGG + chr4_4:79627455-79627474 Msa0706620:intron 30.0%
!! ATTGGGTTGATTTATTGGAT+TGG + chr4_4:79627698-79627717 Msa0706620:intron 30.0%
! ATTGGATTTTAAATGTGCAG+TGG + chr4_4:79627716-79627735 Msa0706620:intron 30.0%
! TTGTTCCTTTATTTGATGCT+GGG - chr4_4:79627752-79627771 None:intergenic 30.0%
! TTTGTTCCTTTATTTGATGC+TGG - chr4_4:79627753-79627772 None:intergenic 30.0%
TGGATATATGGTTTGAAGAA+TGG - chr4_4:79628044-79628063 None:intergenic 30.0%
AGAAGTTATAACAGTAACTG+GGG - chr4_4:79628118-79628137 None:intergenic 30.0%
CAGAAGTTATAACAGTAACT+GGG - chr4_4:79628119-79628138 None:intergenic 30.0%
TCAGAAGTTATAACAGTAAC+TGG - chr4_4:79628120-79628139 None:intergenic 30.0%
TCATCTAACTAAGAGAACAA+AGG + chr4_4:79628152-79628171 Msa0706620:CDS 30.0%
!!! CCCATTTTCTTTATTTTGGT+AGG - chr4_4:79628198-79628217 None:intergenic 30.0%
GACAAAGATCAAATCTGAAT+GGG + chr4_4:79628251-79628270 Msa0706620:CDS 30.0%
CCAATGGTATAGATAAATCA+TGG - chr4_4:79628530-79628549 None:intergenic 30.0%
CCATGATTTATCTATACCAT+TGG + chr4_4:79628527-79628546 Msa0706620:CDS 30.0%
ATCTATACCATTGGATCTTA+AGG + chr4_4:79628536-79628555 Msa0706620:CDS 30.0%
ATTGGATCTTAAGGATTACT+GGG + chr4_4:79628545-79628564 Msa0706620:CDS 30.0%
AACTAGAAATAAACAAAGGG+GGG - chr4_4:79628746-79628765 None:intergenic 30.0%
TTACAGCAATCGCATTTAAA+AGG - chr4_4:79628796-79628815 None:intergenic 30.0%
! TTATGCACATGTGATTTTCT+AGG + chr4_4:79628827-79628846 Msa0706620:three_prime_UTR 30.0%
! GAGAAAAGTTTTCTATGCTA+CGG - chr4_4:79628905-79628924 None:intergenic 30.0%
AGAAAAATAAAGGGATCTCA+GGG - chr4_4:79628929-79628948 None:intergenic 30.0%
TAGAAAAATAAAGGGATCTC+AGG - chr4_4:79628930-79628949 None:intergenic 30.0%
ATGGTAATTGGGAAAATACA+GGG - chr4_4:79625050-79625069 None:intergenic 30.0%
AATGGTAATTGGGAAAATAC+AGG - chr4_4:79625051-79625070 None:intergenic 30.0%
! TTCTCTAAACCTTTGTTTCT+AGG + chr4_4:79625078-79625097 Msa0706620:intron 30.0%
AGAGAATTAAAGGGGAAAAA+AGG - chr4_4:79625211-79625230 None:intergenic 30.0%
AAAGAGAGAGAGAATTAAAG+GGG - chr4_4:79625219-79625238 None:intergenic 30.0%
GAAAGAGAGAGAGAATTAAA+GGG - chr4_4:79625220-79625239 None:intergenic 30.0%
! GTACATTTGGTGAAACAAAA+TGG - chr4_4:79625242-79625261 None:intergenic 30.0%
!! TTTTGTTTCACCAAATGTAC+AGG + chr4_4:79625242-79625261 Msa0706620:intron 30.0%
TTTGTTTCACCAAATGTACA+GGG + chr4_4:79625243-79625262 Msa0706620:intron 30.0%
GCTTTATGTGTAATAGTGTA+TGG + chr4_4:79625383-79625402 Msa0706620:intron 30.0%
AATTACGGTGGATATTTCAT+AGG + chr4_4:79625570-79625589 Msa0706620:intron 30.0%
ATATGCAATTGAAAGTCGAT+AGG - chr4_4:79625809-79625828 None:intergenic 30.0%
CAATTTATAAGTTGTGTCTC+TGG + chr4_4:79625943-79625962 Msa0706620:intron 30.0%
TACATCAAATAGAACCACAA+GGG - chr4_4:79626059-79626078 None:intergenic 30.0%
TTACATCAAATAGAACCACA+AGG - chr4_4:79626060-79626079 None:intergenic 30.0%
TGTCCAGCTTATATTTGAAA+AGG + chr4_4:79626351-79626370 Msa0706620:intron 30.0%
GTCCAGCTTATATTTGAAAA+GGG + chr4_4:79626352-79626371 Msa0706620:intron 30.0%
TGTATTTGTGTCAAGTTCTA+GGG - chr4_4:79626457-79626476 None:intergenic 30.0%
TTCTAAATACATCACCTACT+GGG - chr4_4:79626495-79626514 None:intergenic 30.0%
GGTGATGTATTTAGAAGATT+TGG + chr4_4:79626499-79626518 Msa0706620:intron 30.0%
TATAGCCTACAAATGTAGTA+AGG + chr4_4:79626618-79626637 Msa0706620:intron 30.0%
AAAGTCCTTACTACATTTGT+AGG - chr4_4:79626626-79626645 None:intergenic 30.0%
! ACTTCACAAATTGATTCTGT+GGG - chr4_4:79626773-79626792 None:intergenic 30.0%
ACAGAATCAATTTGTGAAGT+GGG + chr4_4:79626773-79626792 Msa0706620:intron 30.0%
AAGTAGAGCTTATAAAGCTT+GGG - chr4_4:79626804-79626823 None:intergenic 30.0%
TAAGTAGAGCTTATAAAGCT+TGG - chr4_4:79626805-79626824 None:intergenic 30.0%
! AAGCTTTATAAGCTCTACTT+AGG + chr4_4:79626804-79626823 Msa0706620:intron 30.0%
ATATATATCTCTAGTCGAAG+TGG + chr4_4:79626829-79626848 Msa0706620:intron 30.0%
TATATATCTCTAGTCGAAGT+GGG + chr4_4:79626830-79626849 Msa0706620:intron 30.0%
! TTTTCCAGACTTCACATATA+TGG - chr4_4:79626886-79626905 None:intergenic 30.0%
CCTAAGCTCAAATTCTAATA+TGG - chr4_4:79626967-79626986 None:intergenic 30.0%
CCATATTAGAATTTGAGCTT+AGG + chr4_4:79626964-79626983 Msa0706620:intron 30.0%
TTTAAGTGTTCCACATTCAT+TGG - chr4_4:79627067-79627086 None:intergenic 30.0%
TGTAGTTTCTGTACACAAAA+AGG - chr4_4:79627120-79627139 None:intergenic 30.0%
GATGCATACAGTCATTAATA+TGG + chr4_4:79627156-79627175 Msa0706620:intron 30.0%
CAGTTCTATACAAGTTTAAC+CGG + chr4_4:79627239-79627258 Msa0706620:intron 30.0%
!!! AATTTTTTGGAAGGAACAAC+AGG - chr4_4:79627387-79627406 None:intergenic 30.0%
!! TGCTTTTCTCATTTGTTAAC+AGG + chr4_4:79627455-79627474 Msa0706620:intron 30.0%
!! ATTGGGTTGATTTATTGGAT+TGG + chr4_4:79627698-79627717 Msa0706620:intron 30.0%
! ATTGGATTTTAAATGTGCAG+TGG + chr4_4:79627716-79627735 Msa0706620:intron 30.0%
! TTGTTCCTTTATTTGATGCT+GGG - chr4_4:79627752-79627771 None:intergenic 30.0%
! TTTGTTCCTTTATTTGATGC+TGG - chr4_4:79627753-79627772 None:intergenic 30.0%
TGGATATATGGTTTGAAGAA+TGG - chr4_4:79628044-79628063 None:intergenic 30.0%
AGAAGTTATAACAGTAACTG+GGG - chr4_4:79628118-79628137 None:intergenic 30.0%
CAGAAGTTATAACAGTAACT+GGG - chr4_4:79628119-79628138 None:intergenic 30.0%
TCAGAAGTTATAACAGTAAC+TGG - chr4_4:79628120-79628139 None:intergenic 30.0%
TCATCTAACTAAGAGAACAA+AGG + chr4_4:79628152-79628171 Msa0706620:CDS 30.0%
!!! CCCATTTTCTTTATTTTGGT+AGG - chr4_4:79628198-79628217 None:intergenic 30.0%
GACAAAGATCAAATCTGAAT+GGG + chr4_4:79628251-79628270 Msa0706620:CDS 30.0%
CCAATGGTATAGATAAATCA+TGG - chr4_4:79628530-79628549 None:intergenic 30.0%
CCATGATTTATCTATACCAT+TGG + chr4_4:79628527-79628546 Msa0706620:CDS 30.0%
ATCTATACCATTGGATCTTA+AGG + chr4_4:79628536-79628555 Msa0706620:CDS 30.0%
ATTGGATCTTAAGGATTACT+GGG + chr4_4:79628545-79628564 Msa0706620:CDS 30.0%
AACTAGAAATAAACAAAGGG+GGG - chr4_4:79628746-79628765 None:intergenic 30.0%
TTACAGCAATCGCATTTAAA+AGG - chr4_4:79628796-79628815 None:intergenic 30.0%
! TTATGCACATGTGATTTTCT+AGG + chr4_4:79628827-79628846 Msa0706620:three_prime_UTR 30.0%
! GAGAAAAGTTTTCTATGCTA+CGG - chr4_4:79628905-79628924 None:intergenic 30.0%
AGAAAAATAAAGGGATCTCA+GGG - chr4_4:79628929-79628948 None:intergenic 30.0%
TAGAAAAATAAAGGGATCTC+AGG - chr4_4:79628930-79628949 None:intergenic 30.0%
AGAACTTACAGCTACAGAAA+CGG - chr4_4:79624967-79624986 None:intergenic 35.0%
GGAAAGAGAGAGAGAATTAA+AGG - chr4_4:79625221-79625240 None:intergenic 35.0%
TTGTTTCACCAAATGTACAG+GGG + chr4_4:79625244-79625263 Msa0706620:intron 35.0%
! GTATGTACTGATGAATGGAA+TGG + chr4_4:79625317-79625336 Msa0706620:intron 35.0%
CTAATTAGTCCGACAAAAGA+TGG - chr4_4:79625541-79625560 None:intergenic 35.0%
TAGTCACTGTTAAATTACGG+TGG + chr4_4:79625558-79625577 Msa0706620:intron 35.0%
TTACAATAGGCCATTAGCTA+AGG + chr4_4:79625613-79625632 Msa0706620:intron 35.0%
CTAGAGACAACATGTTACAT+GGG - chr4_4:79625782-79625801 None:intergenic 35.0%
ACTAGAGACAACATGTTACA+TGG - chr4_4:79625783-79625802 None:intergenic 35.0%
GTCTTGATTGTAGTGTAAAG+AGG + chr4_4:79625965-79625984 Msa0706620:intron 35.0%
GTGTGTAGCTACATTAAGTA+AGG - chr4_4:79626001-79626020 None:intergenic 35.0%
! AAATGTTTTTCTTCCCCTTG+TGG + chr4_4:79626042-79626061 Msa0706620:intron 35.0%
ACATCAAATAGAACCACAAG+GGG - chr4_4:79626058-79626077 None:intergenic 35.0%
ATTGCGATCTTCAATCTTCA+AGG + chr4_4:79626089-79626108 Msa0706620:intron 35.0%
AAATATAAGCTGGACACTAG+AGG - chr4_4:79626347-79626366 None:intergenic 35.0%
! CTCCCTTTTCAAATATAAGC+TGG - chr4_4:79626357-79626376 None:intergenic 35.0%
CAGCTTATATTTGAAAAGGG+AGG + chr4_4:79626355-79626374 Msa0706620:intron 35.0%
TTGATTGAATCCAAACACAG+TGG + chr4_4:79626429-79626448 Msa0706620:intron 35.0%
CTGTATTTGTGTCAAGTTCT+AGG - chr4_4:79626458-79626477 None:intergenic 35.0%
AACTTGACACAAATACAGCT+AGG + chr4_4:79626460-79626479 Msa0706620:intron 35.0%
ACTTGACACAAATACAGCTA+GGG + chr4_4:79626461-79626480 Msa0706620:intron 35.0%
CTTCTAAATACATCACCTAC+TGG - chr4_4:79626496-79626515 None:intergenic 35.0%
GAACATGTTGGACATATGAA+AGG - chr4_4:79626717-79626736 None:intergenic 35.0%
AAATTGTGAGAGGAACATGT+TGG - chr4_4:79626729-79626748 None:intergenic 35.0%
! ACATGTTCCTCTCACAATTT+TGG + chr4_4:79626729-79626748 Msa0706620:intron 35.0%
! CTTCACAAATTGATTCTGTG+GGG - chr4_4:79626772-79626791 None:intergenic 35.0%
! CACTTCACAAATTGATTCTG+TGG - chr4_4:79626774-79626793 None:intergenic 35.0%
CACAGAATCAATTTGTGAAG+TGG + chr4_4:79626772-79626791 Msa0706620:intron 35.0%
CAGAATCAATTTGTGAAGTG+GGG + chr4_4:79626774-79626793 Msa0706620:intron 35.0%
TTCCACATTCATTGGAGATA+TGG - chr4_4:79627059-79627078 None:intergenic 35.0%
GCATACAGTCATTAATATGG+TGG + chr4_4:79627159-79627178 Msa0706620:intron 35.0%
TGAATAATTACCCTCCATTC+TGG - chr4_4:79627200-79627219 None:intergenic 35.0%
GAACAGCTTGTATCAAAAGA+AGG - chr4_4:79627303-79627322 None:intergenic 35.0%
TACAAGCTGTTCATTCTGAT+TGG + chr4_4:79627311-79627330 Msa0706620:intron 35.0%
!!! GCAGAGAGAAATTTTTTGGA+AGG - chr4_4:79627396-79627415 None:intergenic 35.0%
GGCATCAAGTCAATAAACAA+GGG - chr4_4:79627428-79627447 None:intergenic 35.0%
TGGCATCAAGTCAATAAACA+AGG - chr4_4:79627429-79627448 None:intergenic 35.0%
AAATGAGAAAAGCAACAGCT+TGG - chr4_4:79627449-79627468 None:intergenic 35.0%
! TATGCCTACCGTTTTCATAT+TGG - chr4_4:79627589-79627608 None:intergenic 35.0%
TATGTGCATTCTACTTACCA+GGG - chr4_4:79627639-79627658 None:intergenic 35.0%
ATATGTGCATTCTACTTACC+AGG - chr4_4:79627640-79627659 None:intergenic 35.0%
!! TTAACTTGCAGTTGCACTAT+TGG + chr4_4:79627680-79627699 Msa0706620:intron 35.0%
! TAACTTGCAGTTGCACTATT+GGG + chr4_4:79627681-79627700 Msa0706620:intron 35.0%
!! GCACTATTGGGTTGATTTAT+TGG + chr4_4:79627693-79627712 Msa0706620:intron 35.0%
TTTAAATGTGCAGTGGAATG+TGG + chr4_4:79627723-79627742 Msa0706620:intron 35.0%
! TGTTCCTTTATTTGATGCTG+GGG - chr4_4:79627751-79627770 None:intergenic 35.0%
TCTTCTTGAACTTGAACTAG+AGG + chr4_4:79627828-79627847 Msa0706620:CDS 35.0%
AGTACTATTCCGACTTTGAA+GGG - chr4_4:79627971-79627990 None:intergenic 35.0%
CTTCTGTCATGTTGGATATA+TGG - chr4_4:79628056-79628075 None:intergenic 35.0%
!! CTCGCCCATTTTCTTTATTT+TGG - chr4_4:79628202-79628221 None:intergenic 35.0%
CAAAATAAAGAAAATGGGCG+AGG + chr4_4:79628200-79628219 Msa0706620:CDS 35.0%
AAATGGGCGAGGATTTAAAT+AGG + chr4_4:79628211-79628230 Msa0706620:CDS 35.0%
AATAGGAAGGCTTATTCTGA+AGG + chr4_4:79628228-79628247 Msa0706620:CDS 35.0%
ATAGGAAGGCTTATTCTGAA+GGG + chr4_4:79628229-79628248 Msa0706620:CDS 35.0%
GGACAAAGATCAAATCTGAA+TGG + chr4_4:79628250-79628269 Msa0706620:CDS 35.0%
AGATCAAATCTGAATGGGAT+AGG + chr4_4:79628256-79628275 Msa0706620:CDS 35.0%
! TTTTTAGACGACTTCTCAGT+AGG + chr4_4:79628490-79628509 Msa0706620:CDS 35.0%
CAGTAATCCTTAAGATCCAA+TGG - chr4_4:79628546-79628565 None:intergenic 35.0%
CATTGGATCTTAAGGATTAC+TGG + chr4_4:79628544-79628563 Msa0706620:CDS 35.0%
ACTCGAAACAAATGAATGTC+AGG - chr4_4:79628612-79628631 None:intergenic 35.0%
!! TTTTGATTACAGCTGGTGAT+AGG - chr4_4:79628656-79628675 None:intergenic 35.0%
!! GCAGGTGATTTTTCAATAGA+AGG + chr4_4:79628716-79628735 Msa0706620:three_prime_UTR 35.0%
AGAAAAAGGAAAGAACATGC+AGG - chr4_4:79628869-79628888 None:intergenic 35.0%
AAAAATAAAGGGATCTCAGG+GGG - chr4_4:79628927-79628946 None:intergenic 35.0%
GAAAAATAAAGGGATCTCAG+GGG - chr4_4:79628928-79628947 None:intergenic 35.0%
AGAACTTACAGCTACAGAAA+CGG - chr4_4:79624967-79624986 None:intergenic 35.0%
GGAAAGAGAGAGAGAATTAA+AGG - chr4_4:79625221-79625240 None:intergenic 35.0%
TTGTTTCACCAAATGTACAG+GGG + chr4_4:79625244-79625263 Msa0706620:intron 35.0%
! GTATGTACTGATGAATGGAA+TGG + chr4_4:79625317-79625336 Msa0706620:intron 35.0%
CTAATTAGTCCGACAAAAGA+TGG - chr4_4:79625541-79625560 None:intergenic 35.0%
TAGTCACTGTTAAATTACGG+TGG + chr4_4:79625558-79625577 Msa0706620:intron 35.0%
TTACAATAGGCCATTAGCTA+AGG + chr4_4:79625613-79625632 Msa0706620:intron 35.0%
CTAGAGACAACATGTTACAT+GGG - chr4_4:79625782-79625801 None:intergenic 35.0%
ACTAGAGACAACATGTTACA+TGG - chr4_4:79625783-79625802 None:intergenic 35.0%
GTCTTGATTGTAGTGTAAAG+AGG + chr4_4:79625965-79625984 Msa0706620:intron 35.0%
GTGTGTAGCTACATTAAGTA+AGG - chr4_4:79626001-79626020 None:intergenic 35.0%
! AAATGTTTTTCTTCCCCTTG+TGG + chr4_4:79626042-79626061 Msa0706620:intron 35.0%
ACATCAAATAGAACCACAAG+GGG - chr4_4:79626058-79626077 None:intergenic 35.0%
ATTGCGATCTTCAATCTTCA+AGG + chr4_4:79626089-79626108 Msa0706620:intron 35.0%
AAATATAAGCTGGACACTAG+AGG - chr4_4:79626347-79626366 None:intergenic 35.0%
! CTCCCTTTTCAAATATAAGC+TGG - chr4_4:79626357-79626376 None:intergenic 35.0%
CAGCTTATATTTGAAAAGGG+AGG + chr4_4:79626355-79626374 Msa0706620:intron 35.0%
TTGATTGAATCCAAACACAG+TGG + chr4_4:79626429-79626448 Msa0706620:intron 35.0%
CTGTATTTGTGTCAAGTTCT+AGG - chr4_4:79626458-79626477 None:intergenic 35.0%
AACTTGACACAAATACAGCT+AGG + chr4_4:79626460-79626479 Msa0706620:intron 35.0%
ACTTGACACAAATACAGCTA+GGG + chr4_4:79626461-79626480 Msa0706620:intron 35.0%
CTTCTAAATACATCACCTAC+TGG - chr4_4:79626496-79626515 None:intergenic 35.0%
GAACATGTTGGACATATGAA+AGG - chr4_4:79626717-79626736 None:intergenic 35.0%
AAATTGTGAGAGGAACATGT+TGG - chr4_4:79626729-79626748 None:intergenic 35.0%
! ACATGTTCCTCTCACAATTT+TGG + chr4_4:79626729-79626748 Msa0706620:intron 35.0%
! CTTCACAAATTGATTCTGTG+GGG - chr4_4:79626772-79626791 None:intergenic 35.0%
! CACTTCACAAATTGATTCTG+TGG - chr4_4:79626774-79626793 None:intergenic 35.0%
CACAGAATCAATTTGTGAAG+TGG + chr4_4:79626772-79626791 Msa0706620:intron 35.0%
CAGAATCAATTTGTGAAGTG+GGG + chr4_4:79626774-79626793 Msa0706620:intron 35.0%
TTCCACATTCATTGGAGATA+TGG - chr4_4:79627059-79627078 None:intergenic 35.0%
GCATACAGTCATTAATATGG+TGG + chr4_4:79627159-79627178 Msa0706620:intron 35.0%
TGAATAATTACCCTCCATTC+TGG - chr4_4:79627200-79627219 None:intergenic 35.0%
GAACAGCTTGTATCAAAAGA+AGG - chr4_4:79627303-79627322 None:intergenic 35.0%
TACAAGCTGTTCATTCTGAT+TGG + chr4_4:79627311-79627330 Msa0706620:intron 35.0%
!!! GCAGAGAGAAATTTTTTGGA+AGG - chr4_4:79627396-79627415 None:intergenic 35.0%
GGCATCAAGTCAATAAACAA+GGG - chr4_4:79627428-79627447 None:intergenic 35.0%
TGGCATCAAGTCAATAAACA+AGG - chr4_4:79627429-79627448 None:intergenic 35.0%
AAATGAGAAAAGCAACAGCT+TGG - chr4_4:79627449-79627468 None:intergenic 35.0%
! TATGCCTACCGTTTTCATAT+TGG - chr4_4:79627589-79627608 None:intergenic 35.0%
TATGTGCATTCTACTTACCA+GGG - chr4_4:79627639-79627658 None:intergenic 35.0%
ATATGTGCATTCTACTTACC+AGG - chr4_4:79627640-79627659 None:intergenic 35.0%
!! TTAACTTGCAGTTGCACTAT+TGG + chr4_4:79627680-79627699 Msa0706620:intron 35.0%
! TAACTTGCAGTTGCACTATT+GGG + chr4_4:79627681-79627700 Msa0706620:intron 35.0%
!! GCACTATTGGGTTGATTTAT+TGG + chr4_4:79627693-79627712 Msa0706620:intron 35.0%
TTTAAATGTGCAGTGGAATG+TGG + chr4_4:79627723-79627742 Msa0706620:intron 35.0%
! TGTTCCTTTATTTGATGCTG+GGG - chr4_4:79627751-79627770 None:intergenic 35.0%
TCTTCTTGAACTTGAACTAG+AGG + chr4_4:79627828-79627847 Msa0706620:CDS 35.0%
AGTACTATTCCGACTTTGAA+GGG - chr4_4:79627971-79627990 None:intergenic 35.0%
CTTCTGTCATGTTGGATATA+TGG - chr4_4:79628056-79628075 None:intergenic 35.0%
!! CTCGCCCATTTTCTTTATTT+TGG - chr4_4:79628202-79628221 None:intergenic 35.0%
CAAAATAAAGAAAATGGGCG+AGG + chr4_4:79628200-79628219 Msa0706620:CDS 35.0%
AAATGGGCGAGGATTTAAAT+AGG + chr4_4:79628211-79628230 Msa0706620:CDS 35.0%
AATAGGAAGGCTTATTCTGA+AGG + chr4_4:79628228-79628247 Msa0706620:CDS 35.0%
ATAGGAAGGCTTATTCTGAA+GGG + chr4_4:79628229-79628248 Msa0706620:CDS 35.0%
GGACAAAGATCAAATCTGAA+TGG + chr4_4:79628250-79628269 Msa0706620:CDS 35.0%
AGATCAAATCTGAATGGGAT+AGG + chr4_4:79628256-79628275 Msa0706620:CDS 35.0%
! TTTTTAGACGACTTCTCAGT+AGG + chr4_4:79628490-79628509 Msa0706620:CDS 35.0%
CAGTAATCCTTAAGATCCAA+TGG - chr4_4:79628546-79628565 None:intergenic 35.0%
CATTGGATCTTAAGGATTAC+TGG + chr4_4:79628544-79628563 Msa0706620:CDS 35.0%
ACTCGAAACAAATGAATGTC+AGG - chr4_4:79628612-79628631 None:intergenic 35.0%
!! TTTTGATTACAGCTGGTGAT+AGG - chr4_4:79628656-79628675 None:intergenic 35.0%
!! GCAGGTGATTTTTCAATAGA+AGG + chr4_4:79628716-79628735 Msa0706620:three_prime_UTR 35.0%
AGAAAAAGGAAAGAACATGC+AGG - chr4_4:79628869-79628888 None:intergenic 35.0%
AAAAATAAAGGGATCTCAGG+GGG - chr4_4:79628927-79628946 None:intergenic 35.0%
GAAAAATAAAGGGATCTCAG+GGG - chr4_4:79628928-79628947 None:intergenic 35.0%
AACCCATGACCACTTACTTA+GGG - chr4_4:79625491-79625510 None:intergenic 40.0%
! GAGGAGAATCCATCTTTTGT+CGG + chr4_4:79625529-79625548 Msa0706620:intron 40.0%
ATTGGAAAAGAAGCAGAGAG+TGG - chr4_4:79625673-79625692 None:intergenic 40.0%
GACGTATTGCTTATGTGTGA+TGG + chr4_4:79625870-79625889 Msa0706620:intron 40.0%
!! ATTGCTTATGTGTGATGGAC+AGG + chr4_4:79625875-79625894 Msa0706620:intron 40.0%
!! TTGCTTATGTGTGATGGACA+GGG + chr4_4:79625876-79625895 Msa0706620:intron 40.0%
TTTAAGGAAAGGGAAACGTG+CGG - chr4_4:79626126-79626145 None:intergenic 40.0%
AGTTTGTGGTCAAGAAAGAG+GGG - chr4_4:79626581-79626600 None:intergenic 40.0%
CAGTTTGTGGTCAAGAAAGA+GGG - chr4_4:79626582-79626601 None:intergenic 40.0%
ACAGTTTGTGGTCAAGAAAG+AGG - chr4_4:79626583-79626602 None:intergenic 40.0%
CATATATATGGACAAACCCC+TGG - chr4_4:79626666-79626685 None:intergenic 40.0%
GTGGGGTTGAAATAAGTCTT+GGG - chr4_4:79626755-79626774 None:intergenic 40.0%
TGTGGGGTTGAAATAAGTCT+TGG - chr4_4:79626756-79626775 None:intergenic 40.0%
ACTTCACATATATGGTCCTG+CGG - chr4_4:79626878-79626897 None:intergenic 40.0%
AGGACCATATATGTGAAGTC+TGG + chr4_4:79626879-79626898 Msa0706620:intron 40.0%
GAGTGGAATAACAGAGATTG+TGG + chr4_4:79626910-79626929 Msa0706620:intron 40.0%
TCTATCTCAGACCTGTTGTT+TGG - chr4_4:79626936-79626955 None:intergenic 40.0%
AAGCCATATACGCACTACTT+AGG + chr4_4:79627033-79627052 Msa0706620:intron 40.0%
CAGTCATTAATATGGTGGCA+AGG + chr4_4:79627164-79627183 Msa0706620:intron 40.0%
! ATATGGTGGCAAGGTTTGTT+TGG + chr4_4:79627173-79627192 Msa0706620:intron 40.0%
! TATGGTGGCAAGGTTTGTTT+GGG + chr4_4:79627174-79627193 Msa0706620:intron 40.0%
GGAGGGTAATTATTCAAGCT+TGG + chr4_4:79627204-79627223 Msa0706620:intron 40.0%
!!! GGCAGCAGAGAGAAATTTTT+TGG - chr4_4:79627400-79627419 None:intergenic 40.0%
AGTCAATAAACAAGGGAGAG+AGG - chr4_4:79627421-79627440 None:intergenic 40.0%
! ATTGGTCTCAAGAAGTCTTG+AGG - chr4_4:79627517-79627536 None:intergenic 40.0%
TTGCAACAGATGCGGTAAAT+TGG - chr4_4:79627535-79627554 None:intergenic 40.0%
! AGAGGATTTTGCAACAGATG+CGG - chr4_4:79627543-79627562 None:intergenic 40.0%
AAAATCCTCTGGATGCAAGA+TGG + chr4_4:79627553-79627572 Msa0706620:exon 40.0%
GATGACCGCCAATATGAAAA+CGG + chr4_4:79627578-79627597 Msa0706620:CDS 40.0%
TGAAAACGGTAGGCATAAGA+TGG + chr4_4:79627592-79627611 Msa0706620:CDS 40.0%
!! CATAAGATGGACTACTACAG+AGG + chr4_4:79627605-79627624 Msa0706620:CDS 40.0%
TTAGGTCCATTATGGCTGAA+AGG + chr4_4:79627797-79627816 Msa0706620:CDS 40.0%
ATCTGAAAAGAATGAAGCCC+TGG + chr4_4:79627858-79627877 Msa0706620:CDS 40.0%
CAGTACTATTCCGACTTTGA+AGG - chr4_4:79627972-79627991 None:intergenic 40.0%
CTTCAAAGTCGGAATAGTAC+TGG + chr4_4:79627970-79627989 Msa0706620:CDS 40.0%
ACTGGCAACTTTCCATTCAA+TGG + chr4_4:79627988-79628007 Msa0706620:CDS 40.0%
CGTTGAATTCCACCATTGAA+TGG - chr4_4:79628003-79628022 None:intergenic 40.0%
! TTCAATGGTGGAATTCAACG+TGG + chr4_4:79628003-79628022 Msa0706620:CDS 40.0%
! ATATGCTGCTTCTGTCATGT+TGG - chr4_4:79628064-79628083 None:intergenic 40.0%
AGTTATAACAGTAACTGGGG+AGG - chr4_4:79628115-79628134 None:intergenic 40.0%
! TGGATGCATTGACAATGTAG+TGG - chr4_4:79628409-79628428 None:intergenic 40.0%
! GTAACGATTTGTTCCATGTC+TGG - chr4_4:79628571-79628590 None:intergenic 40.0%
CTGTAATCAAAACCATGCCT+TGG + chr4_4:79628664-79628683 Msa0706620:three_prime_UTR 40.0%
! TGCACATGTGATTTTCTAGG+TGG + chr4_4:79628830-79628849 Msa0706620:three_prime_UTR 40.0%
AACCCATGACCACTTACTTA+GGG - chr4_4:79625491-79625510 None:intergenic 40.0%
! GAGGAGAATCCATCTTTTGT+CGG + chr4_4:79625529-79625548 Msa0706620:intron 40.0%
ATTGGAAAAGAAGCAGAGAG+TGG - chr4_4:79625673-79625692 None:intergenic 40.0%
GACGTATTGCTTATGTGTGA+TGG + chr4_4:79625870-79625889 Msa0706620:intron 40.0%
!! ATTGCTTATGTGTGATGGAC+AGG + chr4_4:79625875-79625894 Msa0706620:intron 40.0%
!! TTGCTTATGTGTGATGGACA+GGG + chr4_4:79625876-79625895 Msa0706620:intron 40.0%
TTTAAGGAAAGGGAAACGTG+CGG - chr4_4:79626126-79626145 None:intergenic 40.0%
AGTTTGTGGTCAAGAAAGAG+GGG - chr4_4:79626581-79626600 None:intergenic 40.0%
CAGTTTGTGGTCAAGAAAGA+GGG - chr4_4:79626582-79626601 None:intergenic 40.0%
ACAGTTTGTGGTCAAGAAAG+AGG - chr4_4:79626583-79626602 None:intergenic 40.0%
CATATATATGGACAAACCCC+TGG - chr4_4:79626666-79626685 None:intergenic 40.0%
GTGGGGTTGAAATAAGTCTT+GGG - chr4_4:79626755-79626774 None:intergenic 40.0%
TGTGGGGTTGAAATAAGTCT+TGG - chr4_4:79626756-79626775 None:intergenic 40.0%
ACTTCACATATATGGTCCTG+CGG - chr4_4:79626878-79626897 None:intergenic 40.0%
AGGACCATATATGTGAAGTC+TGG + chr4_4:79626879-79626898 Msa0706620:intron 40.0%
GAGTGGAATAACAGAGATTG+TGG + chr4_4:79626910-79626929 Msa0706620:intron 40.0%
TCTATCTCAGACCTGTTGTT+TGG - chr4_4:79626936-79626955 None:intergenic 40.0%
AAGCCATATACGCACTACTT+AGG + chr4_4:79627033-79627052 Msa0706620:intron 40.0%
CAGTCATTAATATGGTGGCA+AGG + chr4_4:79627164-79627183 Msa0706620:intron 40.0%
! ATATGGTGGCAAGGTTTGTT+TGG + chr4_4:79627173-79627192 Msa0706620:intron 40.0%
! TATGGTGGCAAGGTTTGTTT+GGG + chr4_4:79627174-79627193 Msa0706620:intron 40.0%
GGAGGGTAATTATTCAAGCT+TGG + chr4_4:79627204-79627223 Msa0706620:intron 40.0%
!!! GGCAGCAGAGAGAAATTTTT+TGG - chr4_4:79627400-79627419 None:intergenic 40.0%
AGTCAATAAACAAGGGAGAG+AGG - chr4_4:79627421-79627440 None:intergenic 40.0%
! ATTGGTCTCAAGAAGTCTTG+AGG - chr4_4:79627517-79627536 None:intergenic 40.0%
TTGCAACAGATGCGGTAAAT+TGG - chr4_4:79627535-79627554 None:intergenic 40.0%
! AGAGGATTTTGCAACAGATG+CGG - chr4_4:79627543-79627562 None:intergenic 40.0%
AAAATCCTCTGGATGCAAGA+TGG + chr4_4:79627553-79627572 Msa0706620:exon 40.0%
GATGACCGCCAATATGAAAA+CGG + chr4_4:79627578-79627597 Msa0706620:CDS 40.0%
TGAAAACGGTAGGCATAAGA+TGG + chr4_4:79627592-79627611 Msa0706620:CDS 40.0%
!! CATAAGATGGACTACTACAG+AGG + chr4_4:79627605-79627624 Msa0706620:CDS 40.0%
TTAGGTCCATTATGGCTGAA+AGG + chr4_4:79627797-79627816 Msa0706620:CDS 40.0%
ATCTGAAAAGAATGAAGCCC+TGG + chr4_4:79627858-79627877 Msa0706620:CDS 40.0%
CAGTACTATTCCGACTTTGA+AGG - chr4_4:79627972-79627991 None:intergenic 40.0%
CTTCAAAGTCGGAATAGTAC+TGG + chr4_4:79627970-79627989 Msa0706620:CDS 40.0%
ACTGGCAACTTTCCATTCAA+TGG + chr4_4:79627988-79628007 Msa0706620:CDS 40.0%
CGTTGAATTCCACCATTGAA+TGG - chr4_4:79628003-79628022 None:intergenic 40.0%
! TTCAATGGTGGAATTCAACG+TGG + chr4_4:79628003-79628022 Msa0706620:CDS 40.0%
! ATATGCTGCTTCTGTCATGT+TGG - chr4_4:79628064-79628083 None:intergenic 40.0%
AGTTATAACAGTAACTGGGG+AGG - chr4_4:79628115-79628134 None:intergenic 40.0%
! TGGATGCATTGACAATGTAG+TGG - chr4_4:79628409-79628428 None:intergenic 40.0%
! GTAACGATTTGTTCCATGTC+TGG - chr4_4:79628571-79628590 None:intergenic 40.0%
CTGTAATCAAAACCATGCCT+TGG + chr4_4:79628664-79628683 Msa0706620:three_prime_UTR 40.0%
! TGCACATGTGATTTTCTAGG+TGG + chr4_4:79628830-79628849 Msa0706620:three_prime_UTR 40.0%
AGAACATGCCCCTGTACATT+TGG - chr4_4:79625255-79625274 None:intergenic 45.0%
CACCCTAAGTAAGTGGTCAT+GGG + chr4_4:79625486-79625505 Msa0706620:intron 45.0%
GAACCCATGACCACTTACTT+AGG - chr4_4:79625492-79625511 None:intergenic 45.0%
CACGGTGAAACCTTAGCTAA+TGG - chr4_4:79625626-79625645 None:intergenic 45.0%
!! TTCTAGGGTACCACTGTGTT+TGG - chr4_4:79626442-79626461 None:intergenic 45.0%
GTCAGACTGCATACAGTTTG+TGG - chr4_4:79626595-79626614 None:intergenic 45.0%
!! TCTCTAGAGTGTCAAGTACC+AGG + chr4_4:79626645-79626664 Msa0706620:intron 45.0%
!! CTCTAGAGTGTCAAGTACCA+GGG + chr4_4:79626646-79626665 Msa0706620:intron 45.0%
! TCTAGAGTGTCAAGTACCAG+GGG + chr4_4:79626647-79626666 Msa0706620:intron 45.0%
TCTTGGGCCAAAATTGTGAG+AGG - chr4_4:79626739-79626758 None:intergenic 45.0%
CTTCACATATATGGTCCTGC+GGG - chr4_4:79626877-79626896 None:intergenic 45.0%
GAAGTCTGGAAAAATGCGAG+TGG + chr4_4:79626893-79626912 Msa0706620:intron 45.0%
AGAGATTGTGGCCAAACAAC+AGG + chr4_4:79626922-79626941 Msa0706620:intron 45.0%
TGGCCTAAGTAGTGCGTATA+TGG - chr4_4:79627039-79627058 None:intergenic 45.0%
GGCCATATCTCCAATGAATG+TGG + chr4_4:79627054-79627073 Msa0706620:intron 45.0%
! AAGGTTTGTTTGGGCCAGAA+TGG + chr4_4:79627183-79627202 Msa0706620:intron 45.0%
TTTGTTTGGGCCAGAATGGA+GGG + chr4_4:79627187-79627206 Msa0706620:intron 45.0%
GCATCTGTTGCAAAATCCTC+TGG + chr4_4:79627542-79627561 Msa0706620:five_prime_UTR 45.0%
ACCGCCAATATGAAAACGGT+AGG + chr4_4:79627582-79627601 Msa0706620:CDS 45.0%
! GCCTACCGTTTTCATATTGG+CGG - chr4_4:79627586-79627605 None:intergenic 45.0%
GGATCCCCAGCATCAAATAA+AGG + chr4_4:79627744-79627763 Msa0706620:CDS 45.0%
TCAGAGGGATAATGCTCTAC+TGG + chr4_4:79627924-79627943 Msa0706620:CDS 45.0%
GGGATAATGCTCTACTGGAA+CGG + chr4_4:79627929-79627948 Msa0706620:CDS 45.0%
GGATAATGCTCTACTGGAAC+GGG + chr4_4:79627930-79627949 Msa0706620:CDS 45.0%
GGCAACTTTCCATTCAATGG+TGG + chr4_4:79627991-79628010 Msa0706620:CDS 45.0%
GAATTCAACGTGGATCCAAG+CGG + chr4_4:79628013-79628032 Msa0706620:CDS 45.0%
AGAAGCAGCATATAGCACGA+CGG + chr4_4:79628071-79628090 Msa0706620:CDS 45.0%
GGGCGAGGATTTAAATAGGA+AGG + chr4_4:79628215-79628234 Msa0706620:CDS 45.0%
CAAATCTGAATGGGATAGGC+AGG + chr4_4:79628260-79628279 Msa0706620:CDS 45.0%
TACCACGACAGTGCTACAAA+TGG + chr4_4:79628352-79628371 Msa0706620:CDS 45.0%
ACCACGACAGTGCTACAAAT+GGG + chr4_4:79628353-79628372 Msa0706620:CDS 45.0%
CTCAGTAGGTTTGCATCAGA+AGG + chr4_4:79628504-79628523 Msa0706620:CDS 45.0%
TGGTGATAGGCGGTCTAAAA+AGG - chr4_4:79628643-79628662 None:intergenic 45.0%
TGATTACAGCTGGTGATAGG+CGG - chr4_4:79628653-79628672 None:intergenic 45.0%
!!! GGCATGGTTTTGATTACAGC+TGG - chr4_4:79628663-79628682 None:intergenic 45.0%
ATATCTTGCTGACCAAGGCA+TGG - chr4_4:79628679-79628698 None:intergenic 45.0%
CAAGCATATCTTGCTGACCA+AGG - chr4_4:79628684-79628703 None:intergenic 45.0%
AGAACATGCCCCTGTACATT+TGG - chr4_4:79625255-79625274 None:intergenic 45.0%
CACCCTAAGTAAGTGGTCAT+GGG + chr4_4:79625486-79625505 Msa0706620:intron 45.0%
GAACCCATGACCACTTACTT+AGG - chr4_4:79625492-79625511 None:intergenic 45.0%
CACGGTGAAACCTTAGCTAA+TGG - chr4_4:79625626-79625645 None:intergenic 45.0%
!! TTCTAGGGTACCACTGTGTT+TGG - chr4_4:79626442-79626461 None:intergenic 45.0%
GTCAGACTGCATACAGTTTG+TGG - chr4_4:79626595-79626614 None:intergenic 45.0%
!! TCTCTAGAGTGTCAAGTACC+AGG + chr4_4:79626645-79626664 Msa0706620:intron 45.0%
!! CTCTAGAGTGTCAAGTACCA+GGG + chr4_4:79626646-79626665 Msa0706620:intron 45.0%
! TCTAGAGTGTCAAGTACCAG+GGG + chr4_4:79626647-79626666 Msa0706620:intron 45.0%
TCTTGGGCCAAAATTGTGAG+AGG - chr4_4:79626739-79626758 None:intergenic 45.0%
CTTCACATATATGGTCCTGC+GGG - chr4_4:79626877-79626896 None:intergenic 45.0%
GAAGTCTGGAAAAATGCGAG+TGG + chr4_4:79626893-79626912 Msa0706620:intron 45.0%
AGAGATTGTGGCCAAACAAC+AGG + chr4_4:79626922-79626941 Msa0706620:intron 45.0%
TGGCCTAAGTAGTGCGTATA+TGG - chr4_4:79627039-79627058 None:intergenic 45.0%
GGCCATATCTCCAATGAATG+TGG + chr4_4:79627054-79627073 Msa0706620:intron 45.0%
! AAGGTTTGTTTGGGCCAGAA+TGG + chr4_4:79627183-79627202 Msa0706620:intron 45.0%
TTTGTTTGGGCCAGAATGGA+GGG + chr4_4:79627187-79627206 Msa0706620:intron 45.0%
GCATCTGTTGCAAAATCCTC+TGG + chr4_4:79627542-79627561 Msa0706620:five_prime_UTR 45.0%
ACCGCCAATATGAAAACGGT+AGG + chr4_4:79627582-79627601 Msa0706620:CDS 45.0%
! GCCTACCGTTTTCATATTGG+CGG - chr4_4:79627586-79627605 None:intergenic 45.0%
GGATCCCCAGCATCAAATAA+AGG + chr4_4:79627744-79627763 Msa0706620:CDS 45.0%
TCAGAGGGATAATGCTCTAC+TGG + chr4_4:79627924-79627943 Msa0706620:CDS 45.0%
GGGATAATGCTCTACTGGAA+CGG + chr4_4:79627929-79627948 Msa0706620:CDS 45.0%
GGATAATGCTCTACTGGAAC+GGG + chr4_4:79627930-79627949 Msa0706620:CDS 45.0%
GGCAACTTTCCATTCAATGG+TGG + chr4_4:79627991-79628010 Msa0706620:CDS 45.0%
GAATTCAACGTGGATCCAAG+CGG + chr4_4:79628013-79628032 Msa0706620:CDS 45.0%
AGAAGCAGCATATAGCACGA+CGG + chr4_4:79628071-79628090 Msa0706620:CDS 45.0%
GGGCGAGGATTTAAATAGGA+AGG + chr4_4:79628215-79628234 Msa0706620:CDS 45.0%
CAAATCTGAATGGGATAGGC+AGG + chr4_4:79628260-79628279 Msa0706620:CDS 45.0%
TACCACGACAGTGCTACAAA+TGG + chr4_4:79628352-79628371 Msa0706620:CDS 45.0%
ACCACGACAGTGCTACAAAT+GGG + chr4_4:79628353-79628372 Msa0706620:CDS 45.0%
CTCAGTAGGTTTGCATCAGA+AGG + chr4_4:79628504-79628523 Msa0706620:CDS 45.0%
TGGTGATAGGCGGTCTAAAA+AGG - chr4_4:79628643-79628662 None:intergenic 45.0%
TGATTACAGCTGGTGATAGG+CGG - chr4_4:79628653-79628672 None:intergenic 45.0%
!!! GGCATGGTTTTGATTACAGC+TGG - chr4_4:79628663-79628682 None:intergenic 45.0%
ATATCTTGCTGACCAAGGCA+TGG - chr4_4:79628679-79628698 None:intergenic 45.0%
CAAGCATATCTTGCTGACCA+AGG - chr4_4:79628684-79628703 None:intergenic 45.0%
!! AAAAAAAAAAAAACTATTTA+AGG - chr4_4:79626142-79626161 None:intergenic 5.0%
!!! ATAGTTTTTTTTTTTTTTTT+TGG + chr4_4:79626145-79626164 Msa0706620:intron 5.0%
!! AAAAAAAAAAAAACTATTTA+AGG - chr4_4:79626142-79626161 None:intergenic 5.0%
!!! ATAGTTTTTTTTTTTTTTTT+TGG + chr4_4:79626145-79626164 Msa0706620:intron 5.0%
AAACATGACACGGGTGAGGA+AGG + chr4_4:79624879-79624898 Msa0706620:five_prime_UTR 50.0%
TCTCTCTCTCTCTCTCTCTC+TGG + chr4_4:79624922-79624941 Msa0706620:five_prime_UTR 50.0%
CGAGGGCAGTACCAAATAAG+AGG - chr4_4:79625464-79625483 None:intergenic 50.0%
! CACTTACTTAGGGTGCTCGA+GGG - chr4_4:79625481-79625500 None:intergenic 50.0%
GCACCCTAAGTAAGTGGTCA+TGG + chr4_4:79625485-79625504 Msa0706620:intron 50.0%
ATTCTCCTCTCCAGACAGTC+GGG - chr4_4:79625518-79625537 None:intergenic 50.0%
GATTCTCCTCTCCAGACAGT+CGG - chr4_4:79625519-79625538 None:intergenic 50.0%
CTAGGGATGTCATACCCAGT+AGG + chr4_4:79626478-79626497 Msa0706620:intron 50.0%
ACATATATGGTCCTGCGGGT+GGG - chr4_4:79626873-79626892 None:intergenic 50.0%
GTTTGTTTGGGCCAGAATGG+AGG + chr4_4:79627186-79627205 Msa0706620:intron 50.0%
ATCGTCCATCTTGCATCCAG+AGG - chr4_4:79627561-79627580 None:intergenic 50.0%
GTCCATTATGGCTGAAAGGC+AGG + chr4_4:79627801-79627820 Msa0706620:CDS 50.0%
TGCCTGCCTTTCAGCCATAA+TGG - chr4_4:79627806-79627825 None:intergenic 50.0%
! GGATGAAGCACTTGCTCAGA+GGG + chr4_4:79627909-79627928 Msa0706620:CDS 50.0%
CTCTTGCAGCCCTTCAAAGT+CGG + chr4_4:79627959-79627978 Msa0706620:CDS 50.0%
TGAAGAATGGTGCATCCGCT+TGG - chr4_4:79628031-79628050 None:intergenic 50.0%
GAATGGGATAGGCAGGATGT+TGG + chr4_4:79628267-79628286 Msa0706620:CDS 50.0%
CTCCAGTACACGTGCAAACT+GGG - chr4_4:79628332-79628351 None:intergenic 50.0%
ACTCCAGTACACGTGCAAAC+TGG - chr4_4:79628333-79628352 None:intergenic 50.0%
CCACGACAGTGCTACAAATG+GGG + chr4_4:79628354-79628373 Msa0706620:CDS 50.0%
CACGACAGTGCTACAAATGG+GGG + chr4_4:79628355-79628374 Msa0706620:CDS 50.0%
CAGTGCTACAAATGGGGGAA+TGG + chr4_4:79628360-79628379 Msa0706620:CDS 50.0%
TGCTACAAATGGGGGAATGG+TGG + chr4_4:79628363-79628382 Msa0706620:CDS 50.0%
! ACAAATGGGGGAATGGTGGA+TGG + chr4_4:79628367-79628386 Msa0706620:CDS 50.0%
TTGTTCGGAAGCTGTGGTAG+TGG - chr4_4:79628429-79628448 None:intergenic 50.0%
ATTGGAGGGCGGAAAATGAG+CGG + chr4_4:79628462-79628481 Msa0706620:CDS 50.0%
AAGGATTACTGGGCCAGACA+TGG + chr4_4:79628555-79628574 Msa0706620:CDS 50.0%
TGCTTGAGTTTAGCGCATGC+AGG + chr4_4:79628698-79628717 Msa0706620:three_prime_UTR 50.0%
AAACATGACACGGGTGAGGA+AGG + chr4_4:79624879-79624898 Msa0706620:five_prime_UTR 50.0%
TCTCTCTCTCTCTCTCTCTC+TGG + chr4_4:79624922-79624941 Msa0706620:five_prime_UTR 50.0%
CGAGGGCAGTACCAAATAAG+AGG - chr4_4:79625464-79625483 None:intergenic 50.0%
! CACTTACTTAGGGTGCTCGA+GGG - chr4_4:79625481-79625500 None:intergenic 50.0%
GCACCCTAAGTAAGTGGTCA+TGG + chr4_4:79625485-79625504 Msa0706620:intron 50.0%
ATTCTCCTCTCCAGACAGTC+GGG - chr4_4:79625518-79625537 None:intergenic 50.0%
GATTCTCCTCTCCAGACAGT+CGG - chr4_4:79625519-79625538 None:intergenic 50.0%
CTAGGGATGTCATACCCAGT+AGG + chr4_4:79626478-79626497 Msa0706620:intron 50.0%
ACATATATGGTCCTGCGGGT+GGG - chr4_4:79626873-79626892 None:intergenic 50.0%
GTTTGTTTGGGCCAGAATGG+AGG + chr4_4:79627186-79627205 Msa0706620:intron 50.0%
ATCGTCCATCTTGCATCCAG+AGG - chr4_4:79627561-79627580 None:intergenic 50.0%
GTCCATTATGGCTGAAAGGC+AGG + chr4_4:79627801-79627820 Msa0706620:CDS 50.0%
TGCCTGCCTTTCAGCCATAA+TGG - chr4_4:79627806-79627825 None:intergenic 50.0%
! GGATGAAGCACTTGCTCAGA+GGG + chr4_4:79627909-79627928 Msa0706620:CDS 50.0%
CTCTTGCAGCCCTTCAAAGT+CGG + chr4_4:79627959-79627978 Msa0706620:CDS 50.0%
TGAAGAATGGTGCATCCGCT+TGG - chr4_4:79628031-79628050 None:intergenic 50.0%
GAATGGGATAGGCAGGATGT+TGG + chr4_4:79628267-79628286 Msa0706620:CDS 50.0%
CTCCAGTACACGTGCAAACT+GGG - chr4_4:79628332-79628351 None:intergenic 50.0%
ACTCCAGTACACGTGCAAAC+TGG - chr4_4:79628333-79628352 None:intergenic 50.0%
CCACGACAGTGCTACAAATG+GGG + chr4_4:79628354-79628373 Msa0706620:CDS 50.0%
CACGACAGTGCTACAAATGG+GGG + chr4_4:79628355-79628374 Msa0706620:CDS 50.0%
CAGTGCTACAAATGGGGGAA+TGG + chr4_4:79628360-79628379 Msa0706620:CDS 50.0%
TGCTACAAATGGGGGAATGG+TGG + chr4_4:79628363-79628382 Msa0706620:CDS 50.0%
! ACAAATGGGGGAATGGTGGA+TGG + chr4_4:79628367-79628386 Msa0706620:CDS 50.0%
TTGTTCGGAAGCTGTGGTAG+TGG - chr4_4:79628429-79628448 None:intergenic 50.0%
ATTGGAGGGCGGAAAATGAG+CGG + chr4_4:79628462-79628481 Msa0706620:CDS 50.0%
AAGGATTACTGGGCCAGACA+TGG + chr4_4:79628555-79628574 Msa0706620:CDS 50.0%
TGCTTGAGTTTAGCGCATGC+AGG + chr4_4:79628698-79628717 Msa0706620:three_prime_UTR 50.0%
ATGACACGGGTGAGGAAGGA+AGG + chr4_4:79624883-79624902 Msa0706620:five_prime_UTR 55.0%
! CCACTTACTTAGGGTGCTCG+AGG - chr4_4:79625482-79625501 None:intergenic 55.0%
CCTCGAGCACCCTAAGTAAG+TGG + chr4_4:79625479-79625498 Msa0706620:intron 55.0%
TGGGTTCAATCCCGACTGTC+TGG + chr4_4:79625505-79625524 Msa0706620:intron 55.0%
TCAATCCCGACTGTCTGGAG+AGG + chr4_4:79625510-79625529 Msa0706620:intron 55.0%
ATATATGGTCCTGCGGGTGG+GGG - chr4_4:79626871-79626890 None:intergenic 55.0%
CATATATGGTCCTGCGGGTG+GGG - chr4_4:79626872-79626891 None:intergenic 55.0%
CACATATATGGTCCTGCGGG+TGG - chr4_4:79626874-79626893 None:intergenic 55.0%
! CTACAGAGGAGCACATTCCC+TGG + chr4_4:79627619-79627638 Msa0706620:CDS 55.0%
TGCTTCATCCCTCTGCCGAA+GGG - chr4_4:79627899-79627918 None:intergenic 55.0%
! GGGATGAAGCACTTGCTCAG+AGG + chr4_4:79627908-79627927 Msa0706620:CDS 55.0%
GTACACGTGCAAACTGGGAC+AGG - chr4_4:79628327-79628346 None:intergenic 55.0%
GTCCCAGTTTGCACGTGTAC+TGG + chr4_4:79628327-79628346 Msa0706620:CDS 55.0%
CCCCATTTGTAGCACTGTCG+TGG - chr4_4:79628357-79628376 None:intergenic 55.0%
ATGCGAGCATGGCGCTTGTT+CGG - chr4_4:79628444-79628463 None:intergenic 55.0%
AACAAGCGCCATGCTCGCAT+TGG + chr4_4:79628444-79628463 Msa0706620:CDS 55.0%
ATGACACGGGTGAGGAAGGA+AGG + chr4_4:79624883-79624902 Msa0706620:five_prime_UTR 55.0%
! CCACTTACTTAGGGTGCTCG+AGG - chr4_4:79625482-79625501 None:intergenic 55.0%
CCTCGAGCACCCTAAGTAAG+TGG + chr4_4:79625479-79625498 Msa0706620:intron 55.0%
TGGGTTCAATCCCGACTGTC+TGG + chr4_4:79625505-79625524 Msa0706620:intron 55.0%
TCAATCCCGACTGTCTGGAG+AGG + chr4_4:79625510-79625529 Msa0706620:intron 55.0%
ATATATGGTCCTGCGGGTGG+GGG - chr4_4:79626871-79626890 None:intergenic 55.0%
CATATATGGTCCTGCGGGTG+GGG - chr4_4:79626872-79626891 None:intergenic 55.0%
CACATATATGGTCCTGCGGG+TGG - chr4_4:79626874-79626893 None:intergenic 55.0%
! CTACAGAGGAGCACATTCCC+TGG + chr4_4:79627619-79627638 Msa0706620:CDS 55.0%
TGCTTCATCCCTCTGCCGAA+GGG - chr4_4:79627899-79627918 None:intergenic 55.0%
! GGGATGAAGCACTTGCTCAG+AGG + chr4_4:79627908-79627927 Msa0706620:CDS 55.0%
GTACACGTGCAAACTGGGAC+AGG - chr4_4:79628327-79628346 None:intergenic 55.0%
GTCCCAGTTTGCACGTGTAC+TGG + chr4_4:79628327-79628346 Msa0706620:CDS 55.0%
CCCCATTTGTAGCACTGTCG+TGG - chr4_4:79628357-79628376 None:intergenic 55.0%
ATGCGAGCATGGCGCTTGTT+CGG - chr4_4:79628444-79628463 None:intergenic 55.0%
AACAAGCGCCATGCTCGCAT+TGG + chr4_4:79628444-79628463 Msa0706620:CDS 55.0%
TATATGGTCCTGCGGGTGGG+GGG - chr4_4:79626870-79626889 None:intergenic 60.0%
CTGCTCGAGACGTAGCCCTT+CGG + chr4_4:79627881-79627900 Msa0706620:CDS 60.0%
AGACGTAGCCCTTCGGCAGA+GGG + chr4_4:79627888-79627907 Msa0706620:CDS 60.0%
GTGCTTCATCCCTCTGCCGA+AGG - chr4_4:79627900-79627919 None:intergenic 60.0%
TGGCGCTTGTTCGGAAGCTG+TGG - chr4_4:79628435-79628454 None:intergenic 60.0%
AAGCGCCATGCTCGCATTGG+AGG + chr4_4:79628447-79628466 Msa0706620:CDS 60.0%
AGCGCCATGCTCGCATTGGA+GGG + chr4_4:79628448-79628467 Msa0706620:CDS 60.0%
TATATGGTCCTGCGGGTGGG+GGG - chr4_4:79626870-79626889 None:intergenic 60.0%
CTGCTCGAGACGTAGCCCTT+CGG + chr4_4:79627881-79627900 Msa0706620:CDS 60.0%
AGACGTAGCCCTTCGGCAGA+GGG + chr4_4:79627888-79627907 Msa0706620:CDS 60.0%
GTGCTTCATCCCTCTGCCGA+AGG - chr4_4:79627900-79627919 None:intergenic 60.0%
TGGCGCTTGTTCGGAAGCTG+TGG - chr4_4:79628435-79628454 None:intergenic 60.0%
AAGCGCCATGCTCGCATTGG+AGG + chr4_4:79628447-79628466 Msa0706620:CDS 60.0%
AGCGCCATGCTCGCATTGGA+GGG + chr4_4:79628448-79628467 Msa0706620:CDS 60.0%
GGCTACGTCTCGAGCAGCCA+GGG - chr4_4:79627878-79627897 None:intergenic 65.0%
GAGACGTAGCCCTTCGGCAG+AGG + chr4_4:79627887-79627906 Msa0706620:CDS 65.0%
GCCATGCTCGCATTGGAGGG+CGG + chr4_4:79628451-79628470 Msa0706620:CDS 65.0%
TCCGCCCTCCAATGCGAGCA+TGG - chr4_4:79628455-79628474 None:intergenic 65.0%
GGCTACGTCTCGAGCAGCCA+GGG - chr4_4:79627878-79627897 None:intergenic 65.0%
GAGACGTAGCCCTTCGGCAG+AGG + chr4_4:79627887-79627906 Msa0706620:CDS 65.0%
GCCATGCTCGCATTGGAGGG+CGG + chr4_4:79628451-79628470 Msa0706620:CDS 65.0%
TCCGCCCTCCAATGCGAGCA+TGG - chr4_4:79628455-79628474 None:intergenic 65.0%
AACACAAGCCCCCCACCCGC+AGG + chr4_4:79626859-79626878 Msa0706620:intron 70.0%
GGGCTACGTCTCGAGCAGCC+AGG - chr4_4:79627879-79627898 None:intergenic 70.0%
AACACAAGCCCCCCACCCGC+AGG + chr4_4:79626859-79626878 Msa0706620:intron 70.0%
GGGCTACGTCTCGAGCAGCC+AGG - chr4_4:79627879-79627898 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 79624876 79628978 79624876 ID=Msa0706620;Name=Msa0706620
chr4_4 mRNA 79624876 79628978 79624876 ID=Msa0706620-mRNA-1;Parent=Msa0706620;Name=Msa0706620-mRNA-1;_AED=0.16;_eAED=0.16;_QI=197|1|1|1|0.5|0.33|3|373|312
chr4_4 exon 79624876 79624977 79624876 ID=Msa0706620-mRNA-1:exon:25690;Parent=Msa0706620-mRNA-1
chr4_4 exon 79627477 79627640 79627477 ID=Msa0706620-mRNA-1:exon:25691;Parent=Msa0706620-mRNA-1
chr4_4 exon 79627736 79628978 79627736 ID=Msa0706620-mRNA-1:exon:25692;Parent=Msa0706620-mRNA-1
chr4_4 five_prime_UTR 79624876 79624977 79624876 ID=Msa0706620-mRNA-1:five_prime_utr;Parent=Msa0706620-mRNA-1
chr4_4 five_prime_UTR 79627477 79627571 79627477 ID=Msa0706620-mRNA-1:five_prime_utr;Parent=Msa0706620-mRNA-1
chr4_4 CDS 79627572 79627640 79627572 ID=Msa0706620-mRNA-1:cds;Parent=Msa0706620-mRNA-1
chr4_4 CDS 79627736 79628605 79627736 ID=Msa0706620-mRNA-1:cds;Parent=Msa0706620-mRNA-1
chr4_4 three_prime_UTR 79628606 79628978 79628606 ID=Msa0706620-mRNA-1:three_prime_utr;Parent=Msa0706620-mRNA-1
Gene Sequence

>Msa0706620

ATGGACGATGACCGCCAATATGAAAACGGTAGGCATAAGATGGACTACTACAGAGGAGCACATTCCCTGTGGAATGTGGATCCCCAGCATCAAATAAAGGAACAAAATGCCCTAGTTATGAATAAAAAAATTAGGTCCATTATGGCTGAAAGGCAGGCAGCTCTTCTTGAACTTGAACTAGAGGCTGCTATATCTGAAAAGAATGAAGCCCTGGCTGCTCGAGACGTAGCCCTTCGGCAGAGGGATGAAGCACTTGCTCAGAGGGATAATGCTCTACTGGAACGGGACAATGCTCTTGCAGCCCTTCAAAGTCGGAATAGTACTGGCAACTTTCCATTCAATGGTGGAATTCAACGTGGATCCAAGCGGATGCACCATTCTTCAAACCATATATCCAACATGACAGAAGCAGCATATAGCACGACGGATATAATAATAAGAGATGCCTCCCCAGTTACTGTTATAACTTCTGAAGATGTCAAATCTCATCTAACTAAGAGAACAAAGGAGAACAAAGCATCACAGACACCTACCAAAATAAAGAAAATGGGCGAGGATTTAAATAGGAAGGCTTATTCTGAAGGGACAAAGATCAAATCTGAATGGGATAGGCAGGATGTTGGCTTGAATTTGATTGCTTTCGATGAAACTGTGATGCCTGTCCCAGTTTGCACGTGTACTGGAGTACCACGACAGTGCTACAAATGGGGGAATGGTGGATGGCAATCATCTTGTTGTACCACTACATTGTCAATGCATCCACTACCACAGCTTCCGAACAAGCGCCATGCTCGCATTGGAGGGCGGAAAATGAGCGGCAATGTTTTTAGACGACTTCTCAGTAGGTTTGCATCAGAAGGCCATGATTTATCTATACCATTGGATCTTAAGGATTACTGGGCCAGACATGGAACAAATCGTTACATTACTATCAAGTAG
Protein sequence

>Msa0706620

MDDDRQYENGRHKMDYYRGAHSLWNVDPQHQIKEQNALVMNKKIRSIMAERQAALLELELEAAISEKNEALAARDVALRQRDEALAQRDNALLERDNALAALQSRNSTGNFPFNGGIQRGSKRMHHSSNHISNMTEAAYSTTDIIIRDASPVTVITSEDVKSHLTKRTKENKASQTPTKIKKMGEDLNRKAYSEGTKIKSEWDRQDVGLNLIAFDETVMPVPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSMHPLPQLPNKRHARIGGRKMSGNVFRRLLSRFASEGHDLSIPLDLKDYWARHGTNRYITIK*