Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706910 | PNY05104.1 | 60.693 | 837 | 234 | 11 | 1 | 750 | 1 | 829 | 0.0 | 942 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706910 | sp|Q5SVZ6|ZMYM1_HUMAN | 22.779 | 619 | 411 | 17 | 49 | 642 | 543 | 1119 | 2.73e-25 | 116 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706910 | A0A2K3NPZ2 | 60.693 | 837 | 234 | 11 | 1 | 750 | 1 | 829 | 0.0 | 942 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0094780 | Msa0706910 | 0.810270 | 1.253050e-50 | -8.615850e-47 |
| Msa0706910 | Msa1192570 | 0.804233 | 2.383797e-49 | -8.615850e-47 |
| Msa0706910 | Msa1399760 | 0.972359 | 1.228511e-134 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706910 | MtrunA17_Chr8g0388951 | 62.275 | 721 | 242 | 10 | 1 | 705 | 1 | 707 | 0.0 | 867 |
| Msa0706910 | MtrunA17_Chr8g0388961 | 63.717 | 678 | 215 | 7 | 1 | 656 | 1 | 669 | 0.0 | 834 |
| Msa0706910 | MtrunA17_Chr3g0119891 | 34.774 | 532 | 339 | 4 | 129 | 658 | 252 | 777 | 1.19e-101 | 330 |
| Msa0706910 | MtrunA17_Chr5g0408081 | 31.349 | 571 | 389 | 2 | 92 | 662 | 224 | 791 | 1.09e-93 | 309 |
| Msa0706910 | MtrunA17_Chr7g0214311 | 43.662 | 284 | 155 | 3 | 47 | 330 | 32 | 310 | 7.25e-71 | 234 |
| Msa0706910 | MtrunA17_Chr3g0093231 | 29.331 | 508 | 338 | 9 | 20 | 519 | 147 | 641 | 1.75e-61 | 218 |
| Msa0706910 | MtrunA17_Chr8g0388971 | 64.706 | 68 | 24 | 0 | 658 | 725 | 105 | 172 | 4.16e-18 | 86.3 |
| Msa0706910 | MtrunA17_Chr3g0144611 | 27.273 | 242 | 161 | 7 | 59 | 292 | 35 | 269 | 2.26e-17 | 84.7 |
| Msa0706910 | MtrunA17_Chr1g0174881 | 40.741 | 81 | 48 | 0 | 577 | 657 | 1 | 81 | 3.14e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706910 | AT1G19260.1 | 29.725 | 619 | 424 | 6 | 43 | 659 | 155 | 764 | 2.23e-101 | 330 |
| Msa0706910 | AT3G29765.1 | 30.582 | 533 | 364 | 4 | 127 | 659 | 5 | 531 | 9.68e-96 | 308 |
| Msa0706910 | AT3G29763.1 | 30.266 | 489 | 322 | 8 | 40 | 523 | 23 | 497 | 1.00e-76 | 256 |
| Msa0706910 | AT4G09660.1 | 29.057 | 530 | 350 | 7 | 84 | 613 | 159 | 662 | 1.34e-74 | 255 |
| Msa0706910 | AT1G41920.1 | 31.830 | 399 | 264 | 4 | 164 | 561 | 100 | 491 | 5.86e-62 | 216 |
| Msa0706910 | AT3G29450.1 | 27.107 | 439 | 285 | 5 | 84 | 514 | 101 | 512 | 1.31e-46 | 174 |
| Msa0706910 | AT2G06541.1 | 24.155 | 621 | 342 | 13 | 43 | 657 | 88 | 585 | 4.26e-46 | 174 |
| Msa0706910 | AT2G06541.2 | 30.769 | 273 | 175 | 6 | 43 | 306 | 88 | 355 | 4.52e-31 | 129 |
| Msa0706910 | AT2G06541.2 | 25.098 | 255 | 139 | 4 | 403 | 657 | 355 | 557 | 9.88e-19 | 90.9 |
| Msa0706910 | AT3G29794.1 | 24.465 | 327 | 209 | 9 | 121 | 435 | 23 | 323 | 1.86e-14 | 76.6 |
| Msa0706910 | AT3G31402.2 | 30.282 | 142 | 97 | 2 | 492 | 633 | 156 | 295 | 6.16e-12 | 67.8 |
| Msa0706910 | AT3G31402.1 | 30.282 | 142 | 97 | 2 | 492 | 633 | 238 | 377 | 1.07e-11 | 67.8 |
| Msa0706910 | AT3G31402.1 | 35.417 | 96 | 56 | 2 | 142 | 233 | 88 | 181 | 2.45e-11 | 67.0 |
| Msa0706910 | AT4G10200.2 | 35.433 | 127 | 76 | 3 | 139 | 261 | 268 | 392 | 4.94e-11 | 66.6 |
| Msa0706910 | AT4G10200.1 | 35.433 | 127 | 76 | 3 | 139 | 261 | 268 | 392 | 4.94e-11 | 66.6 |
Find 101 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGAGACATATTCGATTCT+TGG | 0.166599 | 4_4:+80137747 | None:intergenic |
| ATCAAGAACAATGCAAAATT+TGG | 0.180599 | 4_4:+80137456 | None:intergenic |
| CTATTTGTAGCTTGATAAAT+AGG | 0.242316 | 4_4:-80136889 | Msa0706910:CDS |
| CCAAACATGCACACAATTCT+TGG | 0.249969 | 4_4:+80136198 | None:intergenic |
| TCAAAATGGAGATGCTTATA+TGG | 0.266985 | 4_4:-80136810 | Msa0706910:CDS |
| TGCTTGATGTTAACTACATT+TGG | 0.304293 | 4_4:+80136683 | None:intergenic |
| AGTAAGTATCACGTTTAAAA+AGG | 0.309031 | 4_4:+80137882 | None:intergenic |
| GGGTCAAATTATTGTCAAAA+TGG | 0.312643 | 4_4:-80136824 | Msa0706910:CDS |
| AAGCATATCCGTGACGAAAT+TGG | 0.314630 | 4_4:-80137484 | Msa0706910:CDS |
| CATTGCTGACGAAGATCTTT+CGG | 0.341408 | 4_4:+80136091 | None:intergenic |
| CCGCCTTATCATGACTCTTC+CGG | 0.349471 | 4_4:-80136129 | Msa0706910:CDS |
| CTTGCTTCCACACCCAAGTT+TGG | 0.349664 | 4_4:+80134060 | None:intergenic |
| TTGAGGATGACATCTCATTT+AGG | 0.358818 | 4_4:-80134829 | Msa0706910:intron |
| CCAAGAATTGTGTGCATGTT+TGG | 0.364040 | 4_4:-80136198 | Msa0706910:CDS |
| GGAAAGATAGGAGTCATTTC+CGG | 0.368854 | 4_4:+80137567 | None:intergenic |
| ATGTAAATTATCATGCTATC+TGG | 0.378189 | 4_4:+80136020 | None:intergenic |
| TTCACCAGTTTCAAGCTCTC+TGG | 0.379020 | 4_4:+80136976 | None:intergenic |
| CGACGAGCGCGCCGTGATAT+TGG | 0.384099 | 4_4:+80136530 | None:intergenic |
| CTATTTATCAAGCTACAAAT+AGG | 0.391391 | 4_4:+80136890 | None:intergenic |
| CAACTGTGTAGCTCTGTAAA+TGG | 0.405335 | 4_4:-80135918 | Msa0706910:CDS |
| TGAAGCCCACTTGGAAAGAT+AGG | 0.406132 | 4_4:+80137555 | None:intergenic |
| AGATTTAAGTGTACCAAACT+TGG | 0.407032 | 4_4:-80134073 | Msa0706910:CDS |
| TTGTAACCATCTTGACCATA+TGG | 0.407332 | 4_4:-80133322 | Msa0706910:CDS |
| CTTGATGTTTCTAACATTCG+TGG | 0.407729 | 4_4:-80137265 | Msa0706910:CDS |
| GTCATTTCCGGACAAGGCTT+GGG | 0.412997 | 4_4:+80137579 | None:intergenic |
| GCTTCAAGTTGCTGATGATA+TGG | 0.419085 | 4_4:-80134852 | Msa0706910:CDS |
| AGTCATTTCCGGACAAGGCT+TGG | 0.423564 | 4_4:+80137578 | None:intergenic |
| GCATGATAATTTACATTGAA+AGG | 0.428881 | 4_4:-80136013 | Msa0706910:CDS |
| TCAGCAACTTGAAGCGGAAC+AGG | 0.435676 | 4_4:+80134860 | None:intergenic |
| TCCCATGGATTTCAATGAGC+AGG | 0.435939 | 4_4:-80136303 | Msa0706910:CDS |
| GTTTCCAAGTCTGATGAATC+CGG | 0.436589 | 4_4:-80133375 | Msa0706910:CDS |
| TATTATCAATGTTAAAAGCT+TGG | 0.440418 | 4_4:+80136351 | None:intergenic |
| TCAACAAATCTCAAAATAAG+AGG | 0.441365 | 4_4:+80137400 | None:intergenic |
| GAAACCAGAGAGCTTGAAAC+TGG | 0.442723 | 4_4:-80136980 | Msa0706910:CDS |
| GACGAAGATCTTTCGGTTGT+GGG | 0.443035 | 4_4:+80136098 | None:intergenic |
| GACTACATTTGAGTTTGTAC+TGG | 0.443385 | 4_4:-80136774 | Msa0706910:CDS |
| TAAATCCTGGTCATCTTGTC+CGG | 0.448536 | 4_4:+80133356 | None:intergenic |
| TCGGTTGTGGGTGTAGAAAC+CGG | 0.448740 | 4_4:+80136110 | None:intergenic |
| AGGCTCTGCTTTGGTTCCTA+AGG | 0.453864 | 4_4:-80136381 | Msa0706910:CDS |
| AAAATATGAGACAAGATGGT+TGG | 0.454269 | 4_4:-80136631 | Msa0706910:CDS |
| AAAGCTTGGTAAGTATCCTT+AGG | 0.455280 | 4_4:+80136365 | None:intergenic |
| ACGGCGCGCTCGTCGCGAAC+AGG | 0.457497 | 4_4:-80136522 | Msa0706910:CDS |
| GTTGACTCTAGGCTCTGCTT+TGG | 0.460174 | 4_4:-80136390 | Msa0706910:CDS |
| TGACGAAGATCTTTCGGTTG+TGG | 0.463501 | 4_4:+80136097 | None:intergenic |
| CATGATAATTTACATTGAAA+GGG | 0.471514 | 4_4:-80136012 | Msa0706910:CDS |
| GTTTCTAACATTCGTGGTCA+AGG | 0.476231 | 4_4:-80137259 | Msa0706910:CDS |
| ATTAATCCATATGGTCAAGA+TGG | 0.477495 | 4_4:+80133316 | None:intergenic |
| AAATATGAGACAAGATGGTT+GGG | 0.485373 | 4_4:-80136630 | Msa0706910:CDS |
| TGGTGAAGGGGAAGATCGTA+TGG | 0.485554 | 4_4:-80136960 | Msa0706910:CDS |
| AAATGGAAATGAAGCCCACT+TGG | 0.487231 | 4_4:+80137546 | None:intergenic |
| GCTACTTAGATTAATCCATA+TGG | 0.489767 | 4_4:+80133307 | None:intergenic |
| CTGTGCAATTTCATTTAACT+CGG | 0.495339 | 4_4:+80137009 | None:intergenic |
| CTCTTGTATTTGCTTGTCGA+TGG | 0.498201 | 4_4:+80136448 | None:intergenic |
| GGTGGCATTGAAAGACCATC+AGG | 0.501971 | 4_4:-80135897 | Msa0706910:intron |
| CTCCTGCTCATTGAAATCCA+TGG | 0.504261 | 4_4:+80136301 | None:intergenic |
| ACATAAGTTGGATCTTGCCT+TGG | 0.506573 | 4_4:-80137140 | Msa0706910:CDS |
| AGCTCGTGATAAATCAGAAA+AGG | 0.507407 | 4_4:-80137431 | Msa0706910:CDS |
| CTCTTGGTGTCTTTGTTCAG+CGG | 0.510670 | 4_4:+80137651 | None:intergenic |
| AAGACTGAAATCTTAAATCC+TGG | 0.511695 | 4_4:+80133343 | None:intergenic |
| CAGGTTCAGTGACCAATCAA+TGG | 0.512936 | 4_4:-80136417 | Msa0706910:CDS |
| GAGTCAACAACTCCATTGAT+TGG | 0.518089 | 4_4:+80136405 | None:intergenic |
| GGCAGCTAGTAACTTATCAT+CGG | 0.520652 | 4_4:+80137030 | None:intergenic |
| AAATACAAGAGTTGAATAGC+AGG | 0.522865 | 4_4:-80136436 | Msa0706910:CDS |
| TCCTGCTCATTGAAATCCAT+GGG | 0.529408 | 4_4:+80136302 | None:intergenic |
| CCATTGTTCTCTCATATCAC+AGG | 0.534721 | 4_4:+80137225 | None:intergenic |
| AAACCGGAAGAGTCATGATA+AGG | 0.541101 | 4_4:+80136126 | None:intergenic |
| GCGCGCTCGTCGCGAACAGG+TGG | 0.542658 | 4_4:-80136519 | Msa0706910:CDS |
| AAGTGTACCAAACTTGGGTG+TGG | 0.550917 | 4_4:-80134067 | Msa0706910:CDS |
| ATAGGAGTCATTTCCGGACA+AGG | 0.552169 | 4_4:+80137573 | None:intergenic |
| CGCCGTGATATTGGTACATA+CGG | 0.553767 | 4_4:+80136539 | None:intergenic |
| AAGTTGGATCTTGCCTTGGT+TGG | 0.554300 | 4_4:-80137136 | Msa0706910:CDS |
| GCAGCTAGTAACTTATCATC+GGG | 0.555037 | 4_4:+80137031 | None:intergenic |
| CCATTGAAAGAAAAGCCTCT+TGG | 0.555118 | 4_4:+80137635 | None:intergenic |
| CTTCAAAATATGAGACAAGA+TGG | 0.560996 | 4_4:-80136635 | Msa0706910:CDS |
| TGGTCGAACTTATAGCATCA+TGG | 0.561560 | 4_4:-80137615 | Msa0706910:CDS |
| GAGAGCTTGAAACTGGTGAA+GGG | 0.562267 | 4_4:-80136973 | Msa0706910:CDS |
| TTCTGTTGATGCACCAACCA+AGG | 0.563748 | 4_4:+80137123 | None:intergenic |
| TTTCTAACATTCGTGGTCAA+GGG | 0.564642 | 4_4:-80137258 | Msa0706910:CDS |
| GTAGTAATGGTCAAAAGTCA+AGG | 0.581280 | 4_4:-80137913 | None:intergenic |
| TCAATGGAGTTGTTGACTCT+AGG | 0.585580 | 4_4:-80136401 | Msa0706910:CDS |
| TTGTCCGGATTCATCAGACT+TGG | 0.587046 | 4_4:+80133371 | None:intergenic |
| AGTTGCTGATGATATGGTTG+AGG | 0.587150 | 4_4:-80134846 | Msa0706910:CDS |
| CGCTGAACAAAGACACCAAG+AGG | 0.590185 | 4_4:-80137650 | Msa0706910:CDS |
| TGGAATCACCAATTTCGTCA+CGG | 0.591231 | 4_4:+80137476 | None:intergenic |
| CAGTGAATGTAGTATGCAGA+AGG | 0.598207 | 4_4:+80137169 | None:intergenic |
| AGAGAGCTTGAAACTGGTGA+AGG | 0.602410 | 4_4:-80136974 | Msa0706910:CDS |
| GATTTAAGTGTACCAAACTT+GGG | 0.603031 | 4_4:-80134072 | Msa0706910:CDS |
| CTTGACGAAGAAGAATCTGA+TGG | 0.603686 | 4_4:-80134884 | Msa0706910:CDS |
| TGAATCCGGACAAGATGACC+AGG | 0.603872 | 4_4:-80133361 | Msa0706910:CDS |
| ATATCATCAGCAACTTGAAG+CGG | 0.605780 | 4_4:+80134854 | None:intergenic |
| ATGGGTACTATGCAACAAGT+TGG | 0.605841 | 4_4:-80136941 | Msa0706910:CDS |
| AAAATGGGTTTATACAAGAG+CGG | 0.613784 | 4_4:-80137375 | Msa0706910:CDS |
| CTCCGTATGTACCAATATCA+CGG | 0.614042 | 4_4:-80136541 | Msa0706910:CDS |
| TGACTCCTATCTTTCCAAGT+GGG | 0.618754 | 4_4:-80137560 | Msa0706910:CDS |
| AGAGCTTGAAACTGGTGAAG+GGG | 0.623523 | 4_4:-80136972 | Msa0706910:CDS |
| CCGGAAGAGTCATGATAAGG+CGG | 0.654271 | 4_4:+80136129 | None:intergenic |
| GGTGAAGGGGAAGATCGTAT+GGG | 0.669299 | 4_4:-80136959 | Msa0706910:CDS |
| ATGACTCCTATCTTTCCAAG+TGG | 0.690697 | 4_4:-80137561 | Msa0706910:CDS |
| CTGTGTAGCTCTGTAAATGG+TGG | 0.722555 | 4_4:-80135915 | Msa0706910:CDS |
| CCTGTGATATGAGAGAACAA+TGG | 0.730079 | 4_4:-80137225 | Msa0706910:CDS |
| ACATACGGAGCATTGAACTG+AGG | 0.750501 | 4_4:+80136554 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAAAAAAGAATTGTATAAT+TGG | + | chr4_4:80134133-80134152 | None:intergenic | 15.0% |
| !! | TATATTAAATACTAGTAAGT+TGG | - | chr4_4:80135552-80135571 | Msa0706910:intron | 15.0% |
| !! | AAAACTAGTATTCTATTAAA+GGG | + | chr4_4:80136162-80136181 | None:intergenic | 15.0% |
| !! | AAAAACTAGTATTCTATTAA+AGG | + | chr4_4:80136163-80136182 | None:intergenic | 15.0% |
| !! | ATATATTTATTTATTGCTAC+AGG | - | chr4_4:80137300-80137319 | Msa0706910:CDS | 15.0% |
| !! | ATCAAAATCAACAATAATTA+AGG | + | chr4_4:80137422-80137441 | None:intergenic | 15.0% |
| !! | AAAAAGTTAAGAAAGATAAA+GGG | - | chr4_4:80137715-80137734 | Msa0706910:CDS | 15.0% |
| !!! | TTGAGATTTGTTGATAAAAA+TGG | - | chr4_4:80133833-80133852 | Msa0706910:intron | 20.0% |
| !!! | TGAGATTTGTTGATAAAAAT+GGG | - | chr4_4:80133834-80133853 | Msa0706910:intron | 20.0% |
| !! | CATTTGATGAAAAATACTAT+GGG | - | chr4_4:80134478-80134497 | Msa0706910:intron | 20.0% |
| !! | ATTTGATGAAAAATACTATG+GGG | - | chr4_4:80134479-80134498 | Msa0706910:intron | 20.0% |
| !!! | ACATCTTTTTGTGATAAAAA+TGG | - | chr4_4:80134637-80134656 | Msa0706910:intron | 20.0% |
| !! | TATTATCAATGTTAAAAGCT+TGG | + | chr4_4:80134876-80134895 | None:intergenic | 20.0% |
| !! | CATGATAATTTACATTGAAA+GGG | - | chr4_4:80135212-80135231 | Msa0706910:intron | 20.0% |
| !! | AATAATTATCAAACTTATGC+AGG | + | chr4_4:80136226-80136245 | None:intergenic | 20.0% |
| !! | TAATTATTTCAAAGTGACAT+AGG | - | chr4_4:80136238-80136257 | Msa0706910:CDS | 20.0% |
| !! | ATTTCCATCACTAAAAATAA+AGG | - | chr4_4:80136290-80136309 | Msa0706910:CDS | 20.0% |
| !! | TTTCCATCACTAAAAATAAA+GGG | - | chr4_4:80136291-80136310 | Msa0706910:CDS | 20.0% |
| !!! | ACTTCTAAATATCTTTTAGT+AGG | - | chr4_4:80136876-80136895 | Msa0706910:CDS | 20.0% |
| !!! | ATTTCATGTGTTTTAGATTA+AGG | - | chr4_4:80137688-80137707 | Msa0706910:CDS | 20.0% |
| !! | CAAAAAGTTAAGAAAGATAA+AGG | - | chr4_4:80137714-80137733 | Msa0706910:CDS | 20.0% |
| ! | AGTAAGTATCACGTTTAAAA+AGG | + | chr4_4:80133345-80133364 | None:intergenic | 25.0% |
| !!! | TTTTTTAGCACTTCAAGATA+TGG | - | chr4_4:80133520-80133539 | Msa0706910:intron | 25.0% |
| !!! | GCTTTTAGTATTGATCTTTT+TGG | - | chr4_4:80133542-80133561 | Msa0706910:intron | 25.0% |
| !!! | TGCAAGATATGTTTTTGAAA+TGG | + | chr4_4:80133698-80133717 | None:intergenic | 25.0% |
| ! | ATCAAGAACAATGCAAAATT+TGG | + | chr4_4:80133771-80133790 | None:intergenic | 25.0% |
| !! | AAATTTTGCATTGTTCTTGA+TGG | - | chr4_4:80133770-80133789 | Msa0706910:intron | 25.0% |
| ! | TCAACAAATCTCAAAATAAG+AGG | + | chr4_4:80133827-80133846 | None:intergenic | 25.0% |
| !!! | TTTTTTGATATTGTGGATGT+TGG | - | chr4_4:80133872-80133891 | Msa0706910:intron | 25.0% |
| !! | TTTTAATGCAGTAACTCTTA+AGG | - | chr4_4:80133904-80133923 | Msa0706910:intron | 25.0% |
| ! | CTATTTATCAAGCTACAAAT+AGG | + | chr4_4:80134337-80134356 | None:intergenic | 25.0% |
| ! | CTATTTGTAGCTTGATAAAT+AGG | - | chr4_4:80134335-80134354 | Msa0706910:intron | 25.0% |
| !! | TTAGAAAAACTTTCTGAGAA+TGG | - | chr4_4:80134379-80134398 | Msa0706910:intron | 25.0% |
| !! | TAGAAAAACTTTCTGAGAAT+GGG | - | chr4_4:80134380-80134399 | Msa0706910:intron | 25.0% |
| ! | GCATTTGATGAAAAATACTA+TGG | - | chr4_4:80134477-80134496 | Msa0706910:intron | 25.0% |
| ! | TGTAGAAAAATATTATCCCA+TGG | - | chr4_4:80134906-80134925 | Msa0706910:intron | 25.0% |
| ! | ATGTAAATTATCATGCTATC+TGG | + | chr4_4:80135207-80135226 | None:intergenic | 25.0% |
| ! | GCATGATAATTTACATTGAA+AGG | - | chr4_4:80135211-80135230 | Msa0706910:intron | 25.0% |
| ! | TAAGGTTTAAACTAACAGAA+AGG | + | chr4_4:80135396-80135415 | None:intergenic | 25.0% |
| ! | CAATTCTGTTTACTTGAAAA+TGG | - | chr4_4:80135436-80135455 | Msa0706910:intron | 25.0% |
| ! | AAGATGAAAAACCAAAACAT+GGG | + | chr4_4:80135687-80135706 | None:intergenic | 25.0% |
| ! | GCAGTGTTTAATGAAAAATT+AGG | + | chr4_4:80135798-80135817 | None:intergenic | 25.0% |
| ! | TTCATTAAACACTGCATATT+AGG | - | chr4_4:80135803-80135822 | Msa0706910:intron | 25.0% |
| !! | TAAGTTTGCAACCTTTTATT+TGG | - | chr4_4:80136191-80136210 | Msa0706910:CDS | 25.0% |
| !!! | TCTCATTTAGGTATTGATTT+TGG | - | chr4_4:80136407-80136426 | Msa0706910:CDS | 25.0% |
| !!! | TGATTCTGTTTTGAATCAAT+CGG | + | chr4_4:80136707-80136726 | None:intergenic | 25.0% |
| ! | GATTCAAAACAGAATCATTA+AGG | - | chr4_4:80136710-80136729 | Msa0706910:CDS | 25.0% |
| !! | TCATTATTCAAATTTTCCAC+TGG | - | chr4_4:80136798-80136817 | Msa0706910:CDS | 25.0% |
| ! | CAAATGTATTAAACACCAAA+AGG | - | chr4_4:80136837-80136856 | Msa0706910:CDS | 25.0% |
| ! | AATTGAAAAGAAGCAATTGA+AGG | - | chr4_4:80137000-80137019 | Msa0706910:CDS | 25.0% |
| ! | ATTGAAAAGAAGCAATTGAA+GGG | - | chr4_4:80137001-80137020 | Msa0706910:CDS | 25.0% |
| ! | ATTAGAGTATGCAATGTTAA+GGG | + | chr4_4:80137073-80137092 | None:intergenic | 25.0% |
| ! | AATTAGAGTATGCAATGTTA+AGG | + | chr4_4:80137074-80137093 | None:intergenic | 25.0% |
| ! | AATCAACAATAATTAAGGCA+AGG | + | chr4_4:80137417-80137436 | None:intergenic | 25.0% |
| ! | TTTTCTTCAGGACAATTTTG+GGG | + | chr4_4:80133404-80133423 | None:intergenic | 30.0% |
| ! | GTTTTCTTCAGGACAATTTT+GGG | + | chr4_4:80133405-80133424 | None:intergenic | 30.0% |
| AAGTGCTAAAAAACGAACAA+TGG | + | chr4_4:80133513-80133532 | None:intergenic | 30.0% | |
| ! | AAAATGGGTTTATACAAGAG+CGG | - | chr4_4:80133849-80133868 | Msa0706910:intron | 30.0% |
| CTGTGCAATTTCATTTAACT+CGG | + | chr4_4:80134218-80134237 | None:intergenic | 30.0% | |
| GGGTCAAATTATTGTCAAAA+TGG | - | chr4_4:80134400-80134419 | Msa0706910:intron | 30.0% | |
| TCAAAATGGAGATGCTTATA+TGG | - | chr4_4:80134414-80134433 | Msa0706910:intron | 30.0% | |
| TGCTTGATGTTAACTACATT+TGG | + | chr4_4:80134544-80134563 | None:intergenic | 30.0% | |
| CTTCAAAATATGAGACAAGA+TGG | - | chr4_4:80134589-80134608 | Msa0706910:intron | 30.0% | |
| AAAATATGAGACAAGATGGT+TGG | - | chr4_4:80134593-80134612 | Msa0706910:intron | 30.0% | |
| AAATATGAGACAAGATGGTT+GGG | - | chr4_4:80134594-80134613 | Msa0706910:intron | 30.0% | |
| AAATACAAGAGTTGAATAGC+AGG | - | chr4_4:80134788-80134807 | Msa0706910:intron | 30.0% | |
| GTCTATGTTGAAAAACATGA+TGG | - | chr4_4:80135167-80135186 | Msa0706910:intron | 30.0% | |
| AAGAAGAGATAATTACCTGA+TGG | + | chr4_4:80135345-80135364 | None:intergenic | 30.0% | |
| GTTTAAACCTTATATGTCAC+TGG | - | chr4_4:80135404-80135423 | Msa0706910:intron | 30.0% | |
| ! | TTTCAAGTAAACAGAATTGC+AGG | + | chr4_4:80135435-80135454 | None:intergenic | 30.0% |
| AGATGAAAAACCAAAACATG+GGG | + | chr4_4:80135686-80135705 | None:intergenic | 30.0% | |
| CAAGATGAAAAACCAAAACA+TGG | + | chr4_4:80135688-80135707 | None:intergenic | 30.0% | |
| ! | ATAGCCATGTTTTCTCATTT+AGG | - | chr4_4:80135717-80135736 | Msa0706910:intron | 30.0% |
| AGTTCCTAAATGAGAAAACA+TGG | + | chr4_4:80135724-80135743 | None:intergenic | 30.0% | |
| TGGGTCTACATAATTAATCA+TGG | + | chr4_4:80135841-80135860 | None:intergenic | 30.0% | |
| TTAATTATGTAGACCCATAG+AGG | - | chr4_4:80135844-80135863 | Msa0706910:intron | 30.0% | |
| ! | TAGTTACAAGGCTTTAATAG+AGG | - | chr4_4:80136080-80136099 | Msa0706910:CDS | 30.0% |
| GGAGTAAGAAACCAAATAAA+AGG | + | chr4_4:80136205-80136224 | None:intergenic | 30.0% | |
| TTTGACACACATCATACATT+TGG | + | chr4_4:80136271-80136290 | None:intergenic | 30.0% | |
| !!! | GTTCCCTTTATTTTTAGTGA+TGG | + | chr4_4:80136297-80136316 | None:intergenic | 30.0% |
| AGGGACTATCTTATTAGATT+TGG | + | chr4_4:80136648-80136667 | None:intergenic | 30.0% | |
| AAAACAGAATCATTAAGGCA+TGG | - | chr4_4:80136715-80136734 | Msa0706910:CDS | 30.0% | |
| ACTCTAATTATTTAGCCTAC+TGG | - | chr4_4:80137085-80137104 | Msa0706910:CDS | 30.0% | |
| AGATTTAAGTGTACCAAACT+TGG | - | chr4_4:80137151-80137170 | Msa0706910:CDS | 30.0% | |
| GATTTAAGTGTACCAAACTT+GGG | - | chr4_4:80137152-80137171 | Msa0706910:CDS | 30.0% | |
| ! | GAATCTACTTGCTAATAGAA+AGG | + | chr4_4:80137208-80137227 | None:intergenic | 30.0% |
| AACTTAACAAAAGCAAAGTG+AGG | + | chr4_4:80137255-80137274 | None:intergenic | 30.0% | |
| CATATAGATTTGTCTCAGTT+TGG | - | chr4_4:80137337-80137356 | Msa0706910:CDS | 30.0% | |
| AAGACTGAAATCTTAAATCC+TGG | + | chr4_4:80137884-80137903 | None:intergenic | 30.0% | |
| ! | CGTTTTCTTCAGGACAATTT+TGG | + | chr4_4:80133406-80133425 | None:intergenic | 35.0% |
| ! | CTATACTCATCGTTTTCTTC+AGG | + | chr4_4:80133416-80133435 | None:intergenic | 35.0% |
| CTTGAGACATATTCGATTCT+TGG | + | chr4_4:80133480-80133499 | None:intergenic | 35.0% | |
| !!! | GATATGCTTTTTCACTCTAC+TGG | + | chr4_4:80133729-80133748 | None:intergenic | 35.0% |
| AGCTCGTGATAAATCAGAAA+AGG | - | chr4_4:80133793-80133812 | Msa0706910:intron | 35.0% | |
| !!! | AGAGCGGTTTTTTGATATTG+TGG | - | chr4_4:80133865-80133884 | Msa0706910:intron | 35.0% |
| ! | CTTGATGTTTCTAACATTCG+TGG | - | chr4_4:80133959-80133978 | Msa0706910:intron | 35.0% |
| TTTCTAACATTCGTGGTCAA+GGG | - | chr4_4:80133966-80133985 | Msa0706910:intron | 35.0% | |
| ! | TCACTGTTTTGCACATAAGT+TGG | - | chr4_4:80134072-80134091 | Msa0706910:CDS | 35.0% |
| ! | GACTACATTTGAGTTTGTAC+TGG | - | chr4_4:80134450-80134469 | Msa0706910:intron | 35.0% |
| !!! | CATATTTTGAAGTAGTGCTC+TGG | + | chr4_4:80134581-80134600 | None:intergenic | 35.0% |
| AAAGCTTGGTAAGTATCCTT+AGG | + | chr4_4:80134862-80134881 | None:intergenic | 35.0% | |
| AAGTCACTAGATATCCTCAT+TGG | - | chr4_4:80135589-80135608 | Msa0706910:intron | 35.0% | |
| !! | ATATCCTCATTGGTTTCTCT+TGG | - | chr4_4:80135599-80135618 | Msa0706910:intron | 35.0% |
| GATGAAAAACCAAAACATGG+GGG | + | chr4_4:80135685-80135704 | None:intergenic | 35.0% | |
| CATATTCCTAGAACCTCTAT+GGG | + | chr4_4:80135860-80135879 | None:intergenic | 35.0% | |
| ACATATTCCTAGAACCTCTA+TGG | + | chr4_4:80135861-80135880 | None:intergenic | 35.0% | |
| !!! | ACCTGTTGTAGCAGTTTTTT+GGG | - | chr4_4:80135997-80136016 | Msa0706910:CDS | 35.0% |
| !!! | TGTTTTGACAGCTAGTTACA+AGG | - | chr4_4:80136068-80136087 | Msa0706910:CDS | 35.0% |
| ! | TACAAGGCTTTAATAGAGGA+AGG | - | chr4_4:80136084-80136103 | Msa0706910:CDS | 35.0% |
| ! | ACAAGGCTTTAATAGAGGAA+GGG | - | chr4_4:80136085-80136104 | Msa0706910:CDS | 35.0% |
| AAAGGTTGCAAACTTAAGAG+AGG | + | chr4_4:80136187-80136206 | None:intergenic | 35.0% | |
| AACTCTGTCAGTGAGTAAAT+GGG | + | chr4_4:80136319-80136338 | None:intergenic | 35.0% | |
| ATATCATCAGCAACTTGAAG+CGG | + | chr4_4:80136373-80136392 | None:intergenic | 35.0% | |
| TTGAGGATGACATCTCATTT+AGG | - | chr4_4:80136395-80136414 | Msa0706910:CDS | 35.0% | |
| GCATCTGAAAATCCAAGATT+GGG | + | chr4_4:80136468-80136487 | None:intergenic | 35.0% | |
| AGCATCTGAAAATCCAAGAT+TGG | + | chr4_4:80136469-80136488 | None:intergenic | 35.0% | |
| ! | TGGGAAGCATGAAAATTAGA+TGG | + | chr4_4:80136576-80136595 | None:intergenic | 35.0% |
| TACTATCTCTAACAGAATGG+TGG | + | chr4_4:80136619-80136638 | None:intergenic | 35.0% | |
| GTGTACTATCTCTAACAGAA+TGG | + | chr4_4:80136622-80136641 | None:intergenic | 35.0% | |
| !! | TGTTTTGAATCAATCGGTGA+GGG | + | chr4_4:80136701-80136720 | None:intergenic | 35.0% |
| ! | TTTTCCACTGGCAATTGTAT+TGG | - | chr4_4:80136810-80136829 | Msa0706910:CDS | 35.0% |
| ATGTGATCATGCATATAGCA+TGG | - | chr4_4:80137026-80137045 | Msa0706910:CDS | 35.0% | |
| TTAGCCTACTGGACATTAAA+TGG | - | chr4_4:80137096-80137115 | Msa0706910:CDS | 35.0% | |
| CAAACCATTTAATGTCCAGT+AGG | + | chr4_4:80137103-80137122 | None:intergenic | 35.0% | |
| CTACTGGACATTAAATGGTT+TGG | - | chr4_4:80137101-80137120 | Msa0706910:CDS | 35.0% | |
| ! | CTACTTGCTAATAGAAAGGT+AGG | + | chr4_4:80137204-80137223 | None:intergenic | 35.0% |
| ! | ACACAAAGTATCTGCTGAAA+TGG | + | chr4_4:80137278-80137297 | None:intergenic | 35.0% |
| ! | TTGCTACAGGTACTTTGAAA+AGG | - | chr4_4:80137313-80137332 | Msa0706910:CDS | 35.0% |
| TATCGTACAACATGCATGAT+AGG | + | chr4_4:80137486-80137505 | None:intergenic | 35.0% | |
| ATAGAGAGTGACGGTTATAA+GGG | - | chr4_4:80137585-80137604 | Msa0706910:CDS | 35.0% | |
| ATGCTACTGAACACAATACT+TGG | - | chr4_4:80137610-80137629 | Msa0706910:CDS | 35.0% | |
| ! | TCAAACTTCCGCATCTTTTT+AGG | - | chr4_4:80137640-80137659 | Msa0706910:CDS | 35.0% |
| ! | CAAACTTCCGCATCTTTTTA+GGG | - | chr4_4:80137641-80137660 | Msa0706910:CDS | 35.0% |
| ! | TTCAGACGTGTAATGGAATT+TGG | - | chr4_4:80137664-80137683 | Msa0706910:CDS | 35.0% |
| TTGAATTTGTCTGCAAAAGG+GGG | + | chr4_4:80137797-80137816 | None:intergenic | 35.0% | |
| GTTGAATTTGTCTGCAAAAG+GGG | + | chr4_4:80137798-80137817 | None:intergenic | 35.0% | |
| CGTTGAATTTGTCTGCAAAA+GGG | + | chr4_4:80137799-80137818 | None:intergenic | 35.0% | |
| ACGTTGAATTTGTCTGCAAA+AGG | + | chr4_4:80137800-80137819 | None:intergenic | 35.0% | |
| ! | ATCTTCTCTAGATGCTTTTG+AGG | - | chr4_4:80137821-80137840 | Msa0706910:CDS | 35.0% |
| TTGTAACCATCTTGACCATA+TGG | - | chr4_4:80137902-80137921 | Msa0706910:CDS | 35.0% | |
| !!! | ACAATTTTGGGGTTGAGAAG+TGG | + | chr4_4:80133393-80133412 | None:intergenic | 40.0% |
| CCATTGAAAGAAAAGCCTCT+TGG | + | chr4_4:80133592-80133611 | None:intergenic | 40.0% | |
| ! | CCAAGAGGCTTTTCTTTCAA+TGG | - | chr4_4:80133589-80133608 | Msa0706910:intron | 40.0% |
| TGGTCGAACTTATAGCATCA+TGG | - | chr4_4:80133609-80133628 | Msa0706910:intron | 40.0% | |
| GGAAAGATAGGAGTCATTTC+CGG | + | chr4_4:80133660-80133679 | None:intergenic | 40.0% | |
| ATGACTCCTATCTTTCCAAG+TGG | - | chr4_4:80133663-80133682 | Msa0706910:intron | 40.0% | |
| TGACTCCTATCTTTCCAAGT+GGG | - | chr4_4:80133664-80133683 | Msa0706910:intron | 40.0% | |
| AAATGGAAATGAAGCCCACT+TGG | + | chr4_4:80133681-80133700 | None:intergenic | 40.0% | |
| AAGCATATCCGTGACGAAAT+TGG | - | chr4_4:80133740-80133759 | Msa0706910:intron | 40.0% | |
| TGGAATCACCAATTTCGTCA+CGG | + | chr4_4:80133751-80133770 | None:intergenic | 40.0% | |
| GTTTCTAACATTCGTGGTCA+AGG | - | chr4_4:80133965-80133984 | Msa0706910:intron | 40.0% | |
| CCATTGTTCTCTCATATCAC+AGG | + | chr4_4:80134002-80134021 | None:intergenic | 40.0% | |
| CCTGTGATATGAGAGAACAA+TGG | - | chr4_4:80133999-80134018 | Msa0706910:intron | 40.0% | |
| CAGTGAATGTAGTATGCAGA+AGG | + | chr4_4:80134058-80134077 | None:intergenic | 40.0% | |
| ! | ACATAAGTTGGATCTTGCCT+TGG | - | chr4_4:80134084-80134103 | Msa0706910:intron | 40.0% |
| GCAGCTAGTAACTTATCATC+GGG | + | chr4_4:80134196-80134215 | None:intergenic | 40.0% | |
| GGCAGCTAGTAACTTATCAT+CGG | + | chr4_4:80134197-80134216 | None:intergenic | 40.0% | |
| ATGGGTACTATGCAACAAGT+TGG | - | chr4_4:80134283-80134302 | Msa0706910:intron | 40.0% | |
| CTCCGTATGTACCAATATCA+CGG | - | chr4_4:80134683-80134702 | Msa0706910:intron | 40.0% | |
| CTCTTGTATTTGCTTGTCGA+TGG | + | chr4_4:80134779-80134798 | None:intergenic | 40.0% | |
| GAGTCAACAACTCCATTGAT+TGG | + | chr4_4:80134822-80134841 | None:intergenic | 40.0% | |
| !! | TCAATGGAGTTGTTGACTCT+AGG | - | chr4_4:80134823-80134842 | Msa0706910:intron | 40.0% |
| TCCTGCTCATTGAAATCCAT+GGG | + | chr4_4:80134925-80134944 | None:intergenic | 40.0% | |
| CCAAACATGCACACAATTCT+TGG | + | chr4_4:80135029-80135048 | None:intergenic | 40.0% | |
| CCAAGAATTGTGTGCATGTT+TGG | - | chr4_4:80135026-80135045 | Msa0706910:intron | 40.0% | |
| AAACCGGAAGAGTCATGATA+AGG | + | chr4_4:80135101-80135120 | None:intergenic | 40.0% | |
| CATTGCTGACGAAGATCTTT+CGG | + | chr4_4:80135136-80135155 | None:intergenic | 40.0% | |
| ! | CAACTGTGTAGCTCTGTAAA+TGG | - | chr4_4:80135306-80135325 | Msa0706910:intron | 40.0% |
| GGAATGTCCAGTGACATATA+AGG | + | chr4_4:80135414-80135433 | None:intergenic | 40.0% | |
| TCTAGTGACTTCTTGCAAAC+AGG | + | chr4_4:80135580-80135599 | None:intergenic | 40.0% | |
| CATTCCAAGAGAAACCAATG+AGG | + | chr4_4:80135606-80135625 | None:intergenic | 40.0% | |
| CTCTACATGATCTTACACAC+AGG | - | chr4_4:80135759-80135778 | Msa0706910:intron | 40.0% | |
| !!! | GACCTGTTGTAGCAGTTTTT+TGG | - | chr4_4:80135996-80136015 | Msa0706910:CDS | 40.0% |
| ACCCAAAAAACTGCTACAAC+AGG | + | chr4_4:80136001-80136020 | None:intergenic | 40.0% | |
| AAAGCTGACTGATACTTGTC+AGG | - | chr4_4:80136022-80136041 | Msa0706910:CDS | 40.0% | |
| CAACTCTGTCAGTGAGTAAA+TGG | + | chr4_4:80136320-80136339 | None:intergenic | 40.0% | |
| CTTGACGAAGAAGAATCTGA+TGG | - | chr4_4:80136340-80136359 | Msa0706910:CDS | 40.0% | |
| !! | GCTTCAAGTTGCTGATGATA+TGG | - | chr4_4:80136372-80136391 | Msa0706910:CDS | 40.0% |
| AGTTGCTGATGATATGGTTG+AGG | - | chr4_4:80136378-80136397 | Msa0706910:CDS | 40.0% | |
| TCTGTTGTGTTACCCAATCT+TGG | - | chr4_4:80136453-80136472 | Msa0706910:CDS | 40.0% | |
| ATCTGGCATATGGGTGAAAT+GGG | + | chr4_4:80136595-80136614 | None:intergenic | 40.0% | |
| TATCTGGCATATGGGTGAAA+TGG | + | chr4_4:80136596-80136615 | None:intergenic | 40.0% | |
| AATGGTGGTATCTGGCATAT+GGG | + | chr4_4:80136604-80136623 | None:intergenic | 40.0% | |
| TCTAACAGAATGGTGGTATC+TGG | + | chr4_4:80136612-80136631 | None:intergenic | 40.0% | |
| ATGACTTCTTCTCGCAAAGA+GGG | + | chr4_4:80136667-80136686 | None:intergenic | 40.0% | |
| AATGACTTCTTCTCGCAAAG+AGG | + | chr4_4:80136668-80136687 | None:intergenic | 40.0% | |
| !! | CTGTTTTGAATCAATCGGTG+AGG | + | chr4_4:80136702-80136721 | None:intergenic | 40.0% |
| TTGTCCAATACAATTGCCAG+TGG | + | chr4_4:80136817-80136836 | None:intergenic | 40.0% | |
| ! | AGATGAAGTCATGTGCCTTT+TGG | + | chr4_4:80136855-80136874 | None:intergenic | 40.0% |
| GCAATGTTAAGGGACTGATT+TGG | + | chr4_4:80137063-80137082 | None:intergenic | 40.0% | |
| AGCTTAAGCATAGAGAGTGA+CGG | - | chr4_4:80137576-80137595 | Msa0706910:CDS | 40.0% | |
| CATAGAGAGTGACGGTTATA+AGG | - | chr4_4:80137584-80137603 | Msa0706910:CDS | 40.0% | |
| GTCTGAACCCTAAAAAGATG+CGG | + | chr4_4:80137651-80137670 | None:intergenic | 40.0% | |
| ! | TTTAGGGTTCAGACGTGTAA+TGG | - | chr4_4:80137657-80137676 | Msa0706910:CDS | 40.0% |
| TGAATTTGTCTGCAAAAGGG+GGG | + | chr4_4:80137796-80137815 | None:intergenic | 40.0% | |
| GTTTCCAAGTCTGATGAATC+CGG | - | chr4_4:80137849-80137868 | Msa0706910:CDS | 40.0% | |
| TAAATCCTGGTCATCTTGTC+CGG | + | chr4_4:80137871-80137890 | None:intergenic | 40.0% | |
| !! | CTCTTGGTGTCTTTGTTCAG+CGG | + | chr4_4:80133576-80133595 | None:intergenic | 45.0% |
| !! | GAATTTTCCCAAGCCTTGTC+CGG | - | chr4_4:80133638-80133657 | Msa0706910:intron | 45.0% |
| ATAGGAGTCATTTCCGGACA+AGG | + | chr4_4:80133654-80133673 | None:intergenic | 45.0% | |
| TGAAGCCCACTTGGAAAGAT+AGG | + | chr4_4:80133672-80133691 | None:intergenic | 45.0% | |
| AAGTTGGATCTTGCCTTGGT+TGG | - | chr4_4:80134088-80134107 | Msa0706910:intron | 45.0% | |
| TTCTGTTGATGCACCAACCA+AGG | + | chr4_4:80134104-80134123 | None:intergenic | 45.0% | |
| GAAACCAGAGAGCTTGAAAC+TGG | - | chr4_4:80134244-80134263 | Msa0706910:intron | 45.0% | |
| TTCACCAGTTTCAAGCTCTC+TGG | + | chr4_4:80134251-80134270 | None:intergenic | 45.0% | |
| AGAGAGCTTGAAACTGGTGA+AGG | - | chr4_4:80134250-80134269 | Msa0706910:intron | 45.0% | |
| GAGAGCTTGAAACTGGTGAA+GGG | - | chr4_4:80134251-80134270 | Msa0706910:intron | 45.0% | |
| AGAGCTTGAAACTGGTGAAG+GGG | - | chr4_4:80134252-80134271 | Msa0706910:intron | 45.0% | |
| !! | ACATACGGAGCATTGAACTG+AGG | + | chr4_4:80134673-80134692 | None:intergenic | 45.0% |
| CGCCGTGATATTGGTACATA+CGG | + | chr4_4:80134688-80134707 | None:intergenic | 45.0% | |
| CAGGTTCAGTGACCAATCAA+TGG | - | chr4_4:80134807-80134826 | Msa0706910:intron | 45.0% | |
| TCCCATGGATTTCAATGAGC+AGG | - | chr4_4:80134921-80134940 | Msa0706910:intron | 45.0% | |
| CTCCTGCTCATTGAAATCCA+TGG | + | chr4_4:80134926-80134945 | None:intergenic | 45.0% | |
| GACGAAGATCTTTCGGTTGT+GGG | + | chr4_4:80135129-80135148 | None:intergenic | 45.0% | |
| TGACGAAGATCTTTCGGTTG+TGG | + | chr4_4:80135130-80135149 | None:intergenic | 45.0% | |
| ! | CTGTGTAGCTCTGTAAATGG+TGG | - | chr4_4:80135309-80135328 | Msa0706910:intron | 45.0% |
| GTGTGTATGTGTGTGTGTCT+AGG | + | chr4_4:80135513-80135532 | None:intergenic | 45.0% | |
| TGTAGACCCATAGAGGTTCT+AGG | - | chr4_4:80135851-80135870 | Msa0706910:intron | 45.0% | |
| CTACAACAGGTCTAGTGCTA+GGG | + | chr4_4:80135988-80136007 | None:intergenic | 45.0% | |
| ! | GGCTTTAATAGAGGAAGGGA+AGG | - | chr4_4:80136089-80136108 | Msa0706910:CDS | 45.0% |
| ATAGAGGAAGGGAAGGTCTA+TGG | - | chr4_4:80136096-80136115 | Msa0706910:CDS | 45.0% | |
| GAATGGTGGTATCTGGCATA+TGG | + | chr4_4:80136605-80136624 | None:intergenic | 45.0% | |
| TTGAATCAATCGGTGAGGGA+TGG | + | chr4_4:80136697-80136716 | None:intergenic | 45.0% | |
| !! | TCGTGTAGCTTTGCCTTTTG+TGG | - | chr4_4:80136745-80136764 | Msa0706910:CDS | 45.0% |
| !! | CGTGTAGCTTTGCCTTTTGT+GGG | - | chr4_4:80136746-80136765 | Msa0706910:CDS | 45.0% |
| ACAGACATTGTGCCCACAAA+AGG | + | chr4_4:80136761-80136780 | None:intergenic | 45.0% | |
| AAGTGTACCAAACTTGGGTG+TGG | - | chr4_4:80137157-80137176 | Msa0706910:CDS | 45.0% | |
| TAAGGCAAGGCTCAAGAGTA+TGG | + | chr4_4:80137404-80137423 | None:intergenic | 45.0% | |
| GGAGAAGAAACAACTACAGC+TGG | + | chr4_4:80137465-80137484 | None:intergenic | 45.0% | |
| TTGTCCGGATTCATCAGACT+TGG | + | chr4_4:80137856-80137875 | None:intergenic | 45.0% | |
| CGCTGAACAAAGACACCAAG+AGG | - | chr4_4:80133574-80133593 | Msa0706910:intron | 50.0% | |
| GTCATTTCCGGACAAGGCTT+GGG | + | chr4_4:80133648-80133667 | None:intergenic | 50.0% | |
| AGTCATTTCCGGACAAGGCT+TGG | + | chr4_4:80133649-80133668 | None:intergenic | 50.0% | |
| TGGTGAAGGGGAAGATCGTA+TGG | - | chr4_4:80134264-80134283 | Msa0706910:intron | 50.0% | |
| GGTGAAGGGGAAGATCGTAT+GGG | - | chr4_4:80134265-80134284 | Msa0706910:intron | 50.0% | |
| ! | GTTGACTCTAGGCTCTGCTT+TGG | - | chr4_4:80134834-80134853 | Msa0706910:CDS | 50.0% |
| ! | AGGCTCTGCTTTGGTTCCTA+AGG | - | chr4_4:80134843-80134862 | Msa0706910:CDS | 50.0% |
| CCGGAAGAGTCATGATAAGG+CGG | + | chr4_4:80135098-80135117 | None:intergenic | 50.0% | |
| CCGCCTTATCATGACTCTTC+CGG | - | chr4_4:80135095-80135114 | Msa0706910:intron | 50.0% | |
| TCGGTTGTGGGTGTAGAAAC+CGG | + | chr4_4:80135117-80135136 | None:intergenic | 50.0% | |
| ! | GGTGGCATTGAAAGACCATC+AGG | - | chr4_4:80135327-80135346 | Msa0706910:intron | 50.0% |
| ! | GTCTGATAGCCCCCATGTTT+TGG | - | chr4_4:80135673-80135692 | Msa0706910:intron | 50.0% |
| GCTACAACAGGTCTAGTGCT+AGG | + | chr4_4:80135989-80136008 | None:intergenic | 50.0% | |
| AGCTCTCATGAGCTTGCACT+AGG | - | chr4_4:80136121-80136140 | Msa0706910:CDS | 50.0% | |
| TCAGCAACTTGAAGCGGAAC+AGG | + | chr4_4:80136367-80136386 | None:intergenic | 50.0% | |
| CTTGCTTCCACACCCAAGTT+TGG | + | chr4_4:80137167-80137186 | None:intergenic | 50.0% | |
| TGAATCCGGACAAGATGACC+AGG | - | chr4_4:80137863-80137882 | Msa0706910:CDS | 50.0% | |
| GTGCGCGCGCGCAATACAAA+AGG | - | chr4_4:80135642-80135661 | Msa0706910:intron | 60.0% | |
| CGACGAGCGCGCCGTGATAT+TGG | + | chr4_4:80134697-80134716 | None:intergenic | 65.0% | |
| ACGGCGCGCTCGTCGCGAAC+AGG | - | chr4_4:80134702-80134721 | Msa0706910:intron | 75.0% | |
| GCGCGCTCGTCGCGAACAGG+TGG | - | chr4_4:80134705-80134724 | Msa0706910:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 80133317 | 80137929 | 80133317 | ID=Msa0706910;Name=Msa0706910 |
| chr4_4 | mRNA | 80133317 | 80137929 | 80133317 | ID=Msa0706910-mRNA-1;Parent=Msa0706910;Name=Msa0706910-mRNA-1;_AED=0.41;_eAED=0.41;_QI=0|0.66|0.25|0.75|1|1|4|0|761 |
| chr4_4 | exon | 80135898 | 80137929 | 80135898 | ID=Msa0706910-mRNA-1:exon:25964;Parent=Msa0706910-mRNA-1 |
| chr4_4 | exon | 80134830 | 80134911 | 80134830 | ID=Msa0706910-mRNA-1:exon:25963;Parent=Msa0706910-mRNA-1 |
| chr4_4 | exon | 80134053 | 80134101 | 80134053 | ID=Msa0706910-mRNA-1:exon:25962;Parent=Msa0706910-mRNA-1 |
| chr4_4 | exon | 80133317 | 80133439 | 80133317 | ID=Msa0706910-mRNA-1:exon:25961;Parent=Msa0706910-mRNA-1 |
| chr4_4 | CDS | 80135898 | 80137929 | 80135898 | ID=Msa0706910-mRNA-1:cds;Parent=Msa0706910-mRNA-1 |
| chr4_4 | CDS | 80134830 | 80134911 | 80134830 | ID=Msa0706910-mRNA-1:cds;Parent=Msa0706910-mRNA-1 |
| chr4_4 | CDS | 80134053 | 80134101 | 80134053 | ID=Msa0706910-mRNA-1:cds;Parent=Msa0706910-mRNA-1 |
| chr4_4 | CDS | 80133317 | 80133439 | 80133317 | ID=Msa0706910-mRNA-1:cds;Parent=Msa0706910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
