Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399760 | PNY05104.1 | 60.693 | 837 | 234 | 11 | 1 | 750 | 1 | 829 | 0.0 | 942 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399760 | sp|Q5SVZ6|ZMYM1_HUMAN | 22.779 | 619 | 411 | 17 | 49 | 642 | 543 | 1119 | 2.73e-25 | 116 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399760 | A0A2K3NPZ2 | 60.693 | 837 | 234 | 11 | 1 | 750 | 1 | 829 | 0.0 | 942 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0706910 | Msa1399760 | 0.972359 | 1.228511e-134 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399760 | MtrunA17_Chr8g0388951 | 62.275 | 721 | 242 | 10 | 1 | 705 | 1 | 707 | 0.0 | 867 |
| Msa1399760 | MtrunA17_Chr8g0388961 | 63.717 | 678 | 215 | 7 | 1 | 656 | 1 | 669 | 0.0 | 834 |
| Msa1399760 | MtrunA17_Chr3g0119891 | 34.774 | 532 | 339 | 4 | 129 | 658 | 252 | 777 | 1.19e-101 | 330 |
| Msa1399760 | MtrunA17_Chr5g0408081 | 31.349 | 571 | 389 | 2 | 92 | 662 | 224 | 791 | 1.09e-93 | 309 |
| Msa1399760 | MtrunA17_Chr7g0214311 | 43.662 | 284 | 155 | 3 | 47 | 330 | 32 | 310 | 7.25e-71 | 234 |
| Msa1399760 | MtrunA17_Chr3g0093231 | 29.331 | 508 | 338 | 9 | 20 | 519 | 147 | 641 | 1.75e-61 | 218 |
| Msa1399760 | MtrunA17_Chr8g0388971 | 64.706 | 68 | 24 | 0 | 658 | 725 | 105 | 172 | 4.16e-18 | 86.3 |
| Msa1399760 | MtrunA17_Chr3g0144611 | 27.273 | 242 | 161 | 7 | 59 | 292 | 35 | 269 | 2.26e-17 | 84.7 |
| Msa1399760 | MtrunA17_Chr1g0174881 | 40.741 | 81 | 48 | 0 | 577 | 657 | 1 | 81 | 3.14e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399760 | AT1G19260.1 | 29.725 | 619 | 424 | 6 | 43 | 659 | 155 | 764 | 2.23e-101 | 330 |
| Msa1399760 | AT3G29765.1 | 30.582 | 533 | 364 | 4 | 127 | 659 | 5 | 531 | 9.68e-96 | 308 |
| Msa1399760 | AT3G29763.1 | 30.266 | 489 | 322 | 8 | 40 | 523 | 23 | 497 | 1.00e-76 | 256 |
| Msa1399760 | AT4G09660.1 | 29.057 | 530 | 350 | 7 | 84 | 613 | 159 | 662 | 1.34e-74 | 255 |
| Msa1399760 | AT1G41920.1 | 31.830 | 399 | 264 | 4 | 164 | 561 | 100 | 491 | 5.86e-62 | 216 |
| Msa1399760 | AT3G29450.1 | 27.107 | 439 | 285 | 5 | 84 | 514 | 101 | 512 | 1.31e-46 | 174 |
| Msa1399760 | AT2G06541.1 | 24.155 | 621 | 342 | 13 | 43 | 657 | 88 | 585 | 4.26e-46 | 174 |
| Msa1399760 | AT2G06541.2 | 30.769 | 273 | 175 | 6 | 43 | 306 | 88 | 355 | 4.52e-31 | 129 |
| Msa1399760 | AT2G06541.2 | 25.098 | 255 | 139 | 4 | 403 | 657 | 355 | 557 | 9.88e-19 | 90.9 |
| Msa1399760 | AT3G29794.1 | 24.465 | 327 | 209 | 9 | 121 | 435 | 23 | 323 | 1.86e-14 | 76.6 |
| Msa1399760 | AT3G31402.2 | 30.282 | 142 | 97 | 2 | 492 | 633 | 156 | 295 | 6.16e-12 | 67.8 |
| Msa1399760 | AT3G31402.1 | 30.282 | 142 | 97 | 2 | 492 | 633 | 238 | 377 | 1.07e-11 | 67.8 |
| Msa1399760 | AT3G31402.1 | 35.417 | 96 | 56 | 2 | 142 | 233 | 88 | 181 | 2.45e-11 | 67.0 |
| Msa1399760 | AT4G10200.2 | 35.433 | 127 | 76 | 3 | 139 | 261 | 268 | 392 | 4.94e-11 | 66.6 |
| Msa1399760 | AT4G10200.1 | 35.433 | 127 | 76 | 3 | 139 | 261 | 268 | 392 | 4.94e-11 | 66.6 |
Find 101 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGAGACATATTCGATTCT+TGG | 0.166599 | tig0022394:-58520 | None:intergenic |
| ATCAAGAACAATGCAAAATT+TGG | 0.180599 | tig0022394:-58811 | None:intergenic |
| CTATTTGTAGCTTGATAAAT+AGG | 0.242316 | tig0022394:+59378 | Msa1399760:CDS |
| CCAAACATGCACACAATTCT+TGG | 0.249969 | tig0022394:-60069 | None:intergenic |
| TCAAAATGGAGATGCTTATA+TGG | 0.266985 | tig0022394:+59457 | Msa1399760:CDS |
| TGCTTGATGTTAACTACATT+TGG | 0.304293 | tig0022394:-59584 | None:intergenic |
| AGTAAGTATCACGTTTAAAA+AGG | 0.309031 | tig0022394:-58385 | None:intergenic |
| GGGTCAAATTATTGTCAAAA+TGG | 0.312643 | tig0022394:+59443 | Msa1399760:CDS |
| AAGCATATCCGTGACGAAAT+TGG | 0.314630 | tig0022394:+58783 | Msa1399760:CDS |
| CATTGCTGACGAAGATCTTT+CGG | 0.341408 | tig0022394:-60176 | None:intergenic |
| CCGCCTTATCATGACTCTTC+CGG | 0.349471 | tig0022394:+60138 | Msa1399760:CDS |
| CTTGCTTCCACACCCAAGTT+TGG | 0.349664 | tig0022394:-62207 | None:intergenic |
| TTGAGGATGACATCTCATTT+AGG | 0.358818 | tig0022394:+61438 | Msa1399760:CDS |
| CCAAGAATTGTGTGCATGTT+TGG | 0.364040 | tig0022394:+60069 | Msa1399760:CDS |
| GGAAAGATAGGAGTCATTTC+CGG | 0.368854 | tig0022394:-58700 | None:intergenic |
| ATGTAAATTATCATGCTATC+TGG | 0.378189 | tig0022394:-60247 | None:intergenic |
| TTCACCAGTTTCAAGCTCTC+TGG | 0.379020 | tig0022394:-59291 | None:intergenic |
| CGACGAGCGCGCCGTGATAT+TGG | 0.384099 | tig0022394:-59737 | None:intergenic |
| CTATTTATCAAGCTACAAAT+AGG | 0.391391 | tig0022394:-59377 | None:intergenic |
| CAACTGTGTAGCTCTGTAAA+TGG | 0.405335 | tig0022394:+60349 | Msa1399760:CDS |
| TGAAGCCCACTTGGAAAGAT+AGG | 0.406132 | tig0022394:-58712 | None:intergenic |
| AGATTTAAGTGTACCAAACT+TGG | 0.407032 | tig0022394:+62194 | Msa1399760:CDS |
| TTGTAACCATCTTGACCATA+TGG | 0.407332 | tig0022394:+62945 | Msa1399760:CDS |
| CTTGATGTTTCTAACATTCG+TGG | 0.407729 | tig0022394:+59002 | Msa1399760:CDS |
| GTCATTTCCGGACAAGGCTT+GGG | 0.412997 | tig0022394:-58688 | None:intergenic |
| GCTTCAAGTTGCTGATGATA+TGG | 0.419085 | tig0022394:+61415 | Msa1399760:CDS |
| AGTCATTTCCGGACAAGGCT+TGG | 0.423564 | tig0022394:-58689 | None:intergenic |
| GCATGATAATTTACATTGAA+AGG | 0.428881 | tig0022394:+60254 | Msa1399760:CDS |
| TCAGCAACTTGAAGCGGAAC+AGG | 0.435676 | tig0022394:-61407 | None:intergenic |
| TCCCATGGATTTCAATGAGC+AGG | 0.435939 | tig0022394:+59964 | Msa1399760:CDS |
| GTTTCCAAGTCTGATGAATC+CGG | 0.436589 | tig0022394:+62892 | Msa1399760:CDS |
| TATTATCAATGTTAAAAGCT+TGG | 0.440418 | tig0022394:-59916 | None:intergenic |
| TCAACAAATCTCAAAATAAG+AGG | 0.441365 | tig0022394:-58867 | None:intergenic |
| GAAACCAGAGAGCTTGAAAC+TGG | 0.442723 | tig0022394:+59287 | Msa1399760:CDS |
| GACGAAGATCTTTCGGTTGT+GGG | 0.443035 | tig0022394:-60169 | None:intergenic |
| GACTACATTTGAGTTTGTAC+TGG | 0.443385 | tig0022394:+59493 | Msa1399760:CDS |
| TAAATCCTGGTCATCTTGTC+CGG | 0.448536 | tig0022394:-62911 | None:intergenic |
| TCGGTTGTGGGTGTAGAAAC+CGG | 0.448740 | tig0022394:-60157 | None:intergenic |
| AGGCTCTGCTTTGGTTCCTA+AGG | 0.453864 | tig0022394:+59886 | Msa1399760:CDS |
| AAAATATGAGACAAGATGGT+TGG | 0.454269 | tig0022394:+59636 | Msa1399760:CDS |
| AAAGCTTGGTAAGTATCCTT+AGG | 0.455280 | tig0022394:-59902 | None:intergenic |
| ACGGCGCGCTCGTCGCGAAC+AGG | 0.457497 | tig0022394:+59745 | Msa1399760:CDS |
| GTTGACTCTAGGCTCTGCTT+TGG | 0.460174 | tig0022394:+59877 | Msa1399760:CDS |
| TGACGAAGATCTTTCGGTTG+TGG | 0.463501 | tig0022394:-60170 | None:intergenic |
| CATGATAATTTACATTGAAA+GGG | 0.471514 | tig0022394:+60255 | Msa1399760:CDS |
| GTTTCTAACATTCGTGGTCA+AGG | 0.476231 | tig0022394:+59008 | Msa1399760:CDS |
| ATTAATCCATATGGTCAAGA+TGG | 0.477495 | tig0022394:-62951 | None:intergenic |
| AAATATGAGACAAGATGGTT+GGG | 0.485373 | tig0022394:+59637 | Msa1399760:CDS |
| TGGTGAAGGGGAAGATCGTA+TGG | 0.485554 | tig0022394:+59307 | Msa1399760:CDS |
| AAATGGAAATGAAGCCCACT+TGG | 0.487231 | tig0022394:-58721 | None:intergenic |
| GCTACTTAGATTAATCCATA+TGG | 0.489767 | tig0022394:-62960 | None:intergenic |
| CTGTGCAATTTCATTTAACT+CGG | 0.495339 | tig0022394:-59258 | None:intergenic |
| CTCTTGTATTTGCTTGTCGA+TGG | 0.498201 | tig0022394:-59819 | None:intergenic |
| GGTGGCATTGAAAGACCATC+AGG | 0.501971 | tig0022394:+60370 | Msa1399760:CDS |
| CTCCTGCTCATTGAAATCCA+TGG | 0.504261 | tig0022394:-59966 | None:intergenic |
| ACATAAGTTGGATCTTGCCT+TGG | 0.506573 | tig0022394:+59127 | Msa1399760:CDS |
| AGCTCGTGATAAATCAGAAA+AGG | 0.507407 | tig0022394:+58836 | Msa1399760:CDS |
| CTCTTGGTGTCTTTGTTCAG+CGG | 0.510670 | tig0022394:-58616 | None:intergenic |
| AAGACTGAAATCTTAAATCC+TGG | 0.511695 | tig0022394:-62924 | None:intergenic |
| CAGGTTCAGTGACCAATCAA+TGG | 0.512936 | tig0022394:+59850 | Msa1399760:CDS |
| GAGTCAACAACTCCATTGAT+TGG | 0.518089 | tig0022394:-59862 | None:intergenic |
| GGCAGCTAGTAACTTATCAT+CGG | 0.520652 | tig0022394:-59237 | None:intergenic |
| AAATACAAGAGTTGAATAGC+AGG | 0.522865 | tig0022394:+59831 | Msa1399760:CDS |
| TCCTGCTCATTGAAATCCAT+GGG | 0.529408 | tig0022394:-59965 | None:intergenic |
| CCATTGTTCTCTCATATCAC+AGG | 0.534721 | tig0022394:-59042 | None:intergenic |
| AAACCGGAAGAGTCATGATA+AGG | 0.541101 | tig0022394:-60141 | None:intergenic |
| GCGCGCTCGTCGCGAACAGG+TGG | 0.542658 | tig0022394:+59748 | Msa1399760:CDS |
| AAGTGTACCAAACTTGGGTG+TGG | 0.550917 | tig0022394:+62200 | Msa1399760:CDS |
| ATAGGAGTCATTTCCGGACA+AGG | 0.552169 | tig0022394:-58694 | None:intergenic |
| CGCCGTGATATTGGTACATA+CGG | 0.553767 | tig0022394:-59728 | None:intergenic |
| AAGTTGGATCTTGCCTTGGT+TGG | 0.554300 | tig0022394:+59131 | Msa1399760:CDS |
| GCAGCTAGTAACTTATCATC+GGG | 0.555037 | tig0022394:-59236 | None:intergenic |
| CCATTGAAAGAAAAGCCTCT+TGG | 0.555118 | tig0022394:-58632 | None:intergenic |
| CTTCAAAATATGAGACAAGA+TGG | 0.560996 | tig0022394:+59632 | Msa1399760:CDS |
| TGGTCGAACTTATAGCATCA+TGG | 0.561560 | tig0022394:+58652 | Msa1399760:CDS |
| GAGAGCTTGAAACTGGTGAA+GGG | 0.562267 | tig0022394:+59294 | Msa1399760:CDS |
| TTCTGTTGATGCACCAACCA+AGG | 0.563748 | tig0022394:-59144 | None:intergenic |
| TTTCTAACATTCGTGGTCAA+GGG | 0.564642 | tig0022394:+59009 | Msa1399760:CDS |
| GTAGTAATGGTCAAAAGTCA+AGG | 0.581280 | tig0022394:+58354 | None:intergenic |
| TCAATGGAGTTGTTGACTCT+AGG | 0.585580 | tig0022394:+59866 | Msa1399760:CDS |
| TTGTCCGGATTCATCAGACT+TGG | 0.587046 | tig0022394:-62896 | None:intergenic |
| AGTTGCTGATGATATGGTTG+AGG | 0.587150 | tig0022394:+61421 | Msa1399760:CDS |
| CGCTGAACAAAGACACCAAG+AGG | 0.590185 | tig0022394:+58617 | Msa1399760:CDS |
| TGGAATCACCAATTTCGTCA+CGG | 0.591231 | tig0022394:-58791 | None:intergenic |
| CAGTGAATGTAGTATGCAGA+AGG | 0.598207 | tig0022394:-59098 | None:intergenic |
| AGAGAGCTTGAAACTGGTGA+AGG | 0.602410 | tig0022394:+59293 | Msa1399760:CDS |
| GATTTAAGTGTACCAAACTT+GGG | 0.603031 | tig0022394:+62195 | Msa1399760:CDS |
| CTTGACGAAGAAGAATCTGA+TGG | 0.603686 | tig0022394:+61383 | Msa1399760:CDS |
| TGAATCCGGACAAGATGACC+AGG | 0.603872 | tig0022394:+62906 | Msa1399760:CDS |
| ATATCATCAGCAACTTGAAG+CGG | 0.605780 | tig0022394:-61413 | None:intergenic |
| ATGGGTACTATGCAACAAGT+TGG | 0.605841 | tig0022394:+59326 | Msa1399760:CDS |
| AAAATGGGTTTATACAAGAG+CGG | 0.613784 | tig0022394:+58892 | Msa1399760:CDS |
| CTCCGTATGTACCAATATCA+CGG | 0.614042 | tig0022394:+59726 | Msa1399760:CDS |
| TGACTCCTATCTTTCCAAGT+GGG | 0.618754 | tig0022394:+58707 | Msa1399760:CDS |
| AGAGCTTGAAACTGGTGAAG+GGG | 0.623523 | tig0022394:+59295 | Msa1399760:CDS |
| CCGGAAGAGTCATGATAAGG+CGG | 0.654271 | tig0022394:-60138 | None:intergenic |
| GGTGAAGGGGAAGATCGTAT+GGG | 0.669299 | tig0022394:+59308 | Msa1399760:CDS |
| ATGACTCCTATCTTTCCAAG+TGG | 0.690697 | tig0022394:+58706 | Msa1399760:CDS |
| CTGTGTAGCTCTGTAAATGG+TGG | 0.722555 | tig0022394:+60352 | Msa1399760:CDS |
| CCTGTGATATGAGAGAACAA+TGG | 0.730079 | tig0022394:+59042 | Msa1399760:CDS |
| ACATACGGAGCATTGAACTG+AGG | 0.750501 | tig0022394:-59713 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAAAAAAGAATTGTATAAT+TGG | - | tig0022394:59176-59195 | None:intergenic | 15.0% |
| !! | TATATTAAATACTAGTAAGT+TGG | + | tig0022394:60595-60614 | Msa1399760:intron | 15.0% |
| !! | AAAACTAGTATTCTATTAAA+GGG | - | tig0022394:61205-61224 | None:intergenic | 15.0% |
| !! | AAAAACTAGTATTCTATTAA+AGG | - | tig0022394:61206-61225 | None:intergenic | 15.0% |
| !! | ATATATTTATTTATTGCTAC+AGG | + | tig0022394:62343-62362 | Msa1399760:intron | 15.0% |
| !! | ATCAAAATCAACAATAATTA+AGG | - | tig0022394:62465-62484 | None:intergenic | 15.0% |
| !! | AAAAAGTTAAGAAAGATAAA+GGG | + | tig0022394:62758-62777 | Msa1399760:intron | 15.0% |
| !!! | TTGAGATTTGTTGATAAAAA+TGG | + | tig0022394:58876-58895 | Msa1399760:CDS | 20.0% |
| !!! | TGAGATTTGTTGATAAAAAT+GGG | + | tig0022394:58877-58896 | Msa1399760:CDS | 20.0% |
| !! | CATTTGATGAAAAATACTAT+GGG | + | tig0022394:59521-59540 | Msa1399760:CDS | 20.0% |
| !! | ATTTGATGAAAAATACTATG+GGG | + | tig0022394:59522-59541 | Msa1399760:CDS | 20.0% |
| !!! | ACATCTTTTTGTGATAAAAA+TGG | + | tig0022394:59680-59699 | Msa1399760:CDS | 20.0% |
| !! | TATTATCAATGTTAAAAGCT+TGG | - | tig0022394:59919-59938 | None:intergenic | 20.0% |
| !! | CATGATAATTTACATTGAAA+GGG | + | tig0022394:60255-60274 | Msa1399760:CDS | 20.0% |
| !! | AATAATTATCAAACTTATGC+AGG | - | tig0022394:61269-61288 | None:intergenic | 20.0% |
| !! | TAATTATTTCAAAGTGACAT+AGG | + | tig0022394:61281-61300 | Msa1399760:intron | 20.0% |
| !! | ATTTCCATCACTAAAAATAA+AGG | + | tig0022394:61333-61352 | Msa1399760:intron | 20.0% |
| !! | TTTCCATCACTAAAAATAAA+GGG | + | tig0022394:61334-61353 | Msa1399760:intron | 20.0% |
| !!! | ACTTCTAAATATCTTTTAGT+AGG | + | tig0022394:61919-61938 | Msa1399760:intron | 20.0% |
| !!! | ATTTCATGTGTTTTAGATTA+AGG | + | tig0022394:62731-62750 | Msa1399760:intron | 20.0% |
| !! | CAAAAAGTTAAGAAAGATAA+AGG | + | tig0022394:62757-62776 | Msa1399760:intron | 20.0% |
| ! | AGTAAGTATCACGTTTAAAA+AGG | - | tig0022394:58388-58407 | None:intergenic | 25.0% |
| !!! | TTTTTTAGCACTTCAAGATA+TGG | + | tig0022394:58563-58582 | Msa1399760:CDS | 25.0% |
| !!! | GCTTTTAGTATTGATCTTTT+TGG | + | tig0022394:58585-58604 | Msa1399760:CDS | 25.0% |
| !!! | TGCAAGATATGTTTTTGAAA+TGG | - | tig0022394:58741-58760 | None:intergenic | 25.0% |
| ! | ATCAAGAACAATGCAAAATT+TGG | - | tig0022394:58814-58833 | None:intergenic | 25.0% |
| !! | AAATTTTGCATTGTTCTTGA+TGG | + | tig0022394:58813-58832 | Msa1399760:CDS | 25.0% |
| ! | TCAACAAATCTCAAAATAAG+AGG | - | tig0022394:58870-58889 | None:intergenic | 25.0% |
| !!! | TTTTTTGATATTGTGGATGT+TGG | + | tig0022394:58915-58934 | Msa1399760:CDS | 25.0% |
| !! | TTTTAATGCAGTAACTCTTA+AGG | + | tig0022394:58947-58966 | Msa1399760:CDS | 25.0% |
| ! | CTATTTATCAAGCTACAAAT+AGG | - | tig0022394:59380-59399 | None:intergenic | 25.0% |
| ! | CTATTTGTAGCTTGATAAAT+AGG | + | tig0022394:59378-59397 | Msa1399760:CDS | 25.0% |
| !! | TTAGAAAAACTTTCTGAGAA+TGG | + | tig0022394:59422-59441 | Msa1399760:CDS | 25.0% |
| !! | TAGAAAAACTTTCTGAGAAT+GGG | + | tig0022394:59423-59442 | Msa1399760:CDS | 25.0% |
| ! | GCATTTGATGAAAAATACTA+TGG | + | tig0022394:59520-59539 | Msa1399760:CDS | 25.0% |
| ! | TGTAGAAAAATATTATCCCA+TGG | + | tig0022394:59949-59968 | Msa1399760:CDS | 25.0% |
| ! | ATGTAAATTATCATGCTATC+TGG | - | tig0022394:60250-60269 | None:intergenic | 25.0% |
| ! | GCATGATAATTTACATTGAA+AGG | + | tig0022394:60254-60273 | Msa1399760:CDS | 25.0% |
| ! | TAAGGTTTAAACTAACAGAA+AGG | - | tig0022394:60439-60458 | None:intergenic | 25.0% |
| ! | CAATTCTGTTTACTTGAAAA+TGG | + | tig0022394:60479-60498 | Msa1399760:intron | 25.0% |
| ! | AAGATGAAAAACCAAAACAT+GGG | - | tig0022394:60730-60749 | None:intergenic | 25.0% |
| ! | GCAGTGTTTAATGAAAAATT+AGG | - | tig0022394:60841-60860 | None:intergenic | 25.0% |
| ! | TTCATTAAACACTGCATATT+AGG | + | tig0022394:60846-60865 | Msa1399760:intron | 25.0% |
| !! | TAAGTTTGCAACCTTTTATT+TGG | + | tig0022394:61234-61253 | Msa1399760:intron | 25.0% |
| !!! | TCTCATTTAGGTATTGATTT+TGG | + | tig0022394:61450-61469 | Msa1399760:intron | 25.0% |
| !!! | TGATTCTGTTTTGAATCAAT+CGG | - | tig0022394:61750-61769 | None:intergenic | 25.0% |
| ! | GATTCAAAACAGAATCATTA+AGG | + | tig0022394:61753-61772 | Msa1399760:intron | 25.0% |
| !! | TCATTATTCAAATTTTCCAC+TGG | + | tig0022394:61841-61860 | Msa1399760:intron | 25.0% |
| ! | CAAATGTATTAAACACCAAA+AGG | + | tig0022394:61880-61899 | Msa1399760:intron | 25.0% |
| ! | AATTGAAAAGAAGCAATTGA+AGG | + | tig0022394:62043-62062 | Msa1399760:intron | 25.0% |
| ! | ATTGAAAAGAAGCAATTGAA+GGG | + | tig0022394:62044-62063 | Msa1399760:intron | 25.0% |
| ! | ATTAGAGTATGCAATGTTAA+GGG | - | tig0022394:62116-62135 | None:intergenic | 25.0% |
| ! | AATTAGAGTATGCAATGTTA+AGG | - | tig0022394:62117-62136 | None:intergenic | 25.0% |
| ! | AATCAACAATAATTAAGGCA+AGG | - | tig0022394:62460-62479 | None:intergenic | 25.0% |
| ! | TTTTCTTCAGGACAATTTTG+GGG | - | tig0022394:58447-58466 | None:intergenic | 30.0% |
| ! | GTTTTCTTCAGGACAATTTT+GGG | - | tig0022394:58448-58467 | None:intergenic | 30.0% |
| AAGTGCTAAAAAACGAACAA+TGG | - | tig0022394:58556-58575 | None:intergenic | 30.0% | |
| ! | AAAATGGGTTTATACAAGAG+CGG | + | tig0022394:58892-58911 | Msa1399760:CDS | 30.0% |
| CTGTGCAATTTCATTTAACT+CGG | - | tig0022394:59261-59280 | None:intergenic | 30.0% | |
| GGGTCAAATTATTGTCAAAA+TGG | + | tig0022394:59443-59462 | Msa1399760:CDS | 30.0% | |
| TCAAAATGGAGATGCTTATA+TGG | + | tig0022394:59457-59476 | Msa1399760:CDS | 30.0% | |
| TGCTTGATGTTAACTACATT+TGG | - | tig0022394:59587-59606 | None:intergenic | 30.0% | |
| CTTCAAAATATGAGACAAGA+TGG | + | tig0022394:59632-59651 | Msa1399760:CDS | 30.0% | |
| AAAATATGAGACAAGATGGT+TGG | + | tig0022394:59636-59655 | Msa1399760:CDS | 30.0% | |
| AAATATGAGACAAGATGGTT+GGG | + | tig0022394:59637-59656 | Msa1399760:CDS | 30.0% | |
| AAATACAAGAGTTGAATAGC+AGG | + | tig0022394:59831-59850 | Msa1399760:CDS | 30.0% | |
| GTCTATGTTGAAAAACATGA+TGG | + | tig0022394:60210-60229 | Msa1399760:CDS | 30.0% | |
| AAGAAGAGATAATTACCTGA+TGG | - | tig0022394:60388-60407 | None:intergenic | 30.0% | |
| GTTTAAACCTTATATGTCAC+TGG | + | tig0022394:60447-60466 | Msa1399760:intron | 30.0% | |
| ! | TTTCAAGTAAACAGAATTGC+AGG | - | tig0022394:60478-60497 | None:intergenic | 30.0% |
| AGATGAAAAACCAAAACATG+GGG | - | tig0022394:60729-60748 | None:intergenic | 30.0% | |
| CAAGATGAAAAACCAAAACA+TGG | - | tig0022394:60731-60750 | None:intergenic | 30.0% | |
| ! | ATAGCCATGTTTTCTCATTT+AGG | + | tig0022394:60760-60779 | Msa1399760:intron | 30.0% |
| AGTTCCTAAATGAGAAAACA+TGG | - | tig0022394:60767-60786 | None:intergenic | 30.0% | |
| TGGGTCTACATAATTAATCA+TGG | - | tig0022394:60884-60903 | None:intergenic | 30.0% | |
| TTAATTATGTAGACCCATAG+AGG | + | tig0022394:60887-60906 | Msa1399760:intron | 30.0% | |
| ! | TAGTTACAAGGCTTTAATAG+AGG | + | tig0022394:61123-61142 | Msa1399760:intron | 30.0% |
| GGAGTAAGAAACCAAATAAA+AGG | - | tig0022394:61248-61267 | None:intergenic | 30.0% | |
| TTTGACACACATCATACATT+TGG | - | tig0022394:61314-61333 | None:intergenic | 30.0% | |
| !!! | GTTCCCTTTATTTTTAGTGA+TGG | - | tig0022394:61340-61359 | None:intergenic | 30.0% |
| AGGGACTATCTTATTAGATT+TGG | - | tig0022394:61691-61710 | None:intergenic | 30.0% | |
| AAAACAGAATCATTAAGGCA+TGG | + | tig0022394:61758-61777 | Msa1399760:intron | 30.0% | |
| ACTCTAATTATTTAGCCTAC+TGG | + | tig0022394:62128-62147 | Msa1399760:intron | 30.0% | |
| AGATTTAAGTGTACCAAACT+TGG | + | tig0022394:62194-62213 | Msa1399760:CDS | 30.0% | |
| GATTTAAGTGTACCAAACTT+GGG | + | tig0022394:62195-62214 | Msa1399760:CDS | 30.0% | |
| ! | GAATCTACTTGCTAATAGAA+AGG | - | tig0022394:62251-62270 | None:intergenic | 30.0% |
| AACTTAACAAAAGCAAAGTG+AGG | - | tig0022394:62298-62317 | None:intergenic | 30.0% | |
| CATATAGATTTGTCTCAGTT+TGG | + | tig0022394:62380-62399 | Msa1399760:intron | 30.0% | |
| AAGACTGAAATCTTAAATCC+TGG | - | tig0022394:62927-62946 | None:intergenic | 30.0% | |
| ! | CGTTTTCTTCAGGACAATTT+TGG | - | tig0022394:58449-58468 | None:intergenic | 35.0% |
| ! | CTATACTCATCGTTTTCTTC+AGG | - | tig0022394:58459-58478 | None:intergenic | 35.0% |
| CTTGAGACATATTCGATTCT+TGG | - | tig0022394:58523-58542 | None:intergenic | 35.0% | |
| !!! | GATATGCTTTTTCACTCTAC+TGG | - | tig0022394:58772-58791 | None:intergenic | 35.0% |
| AGCTCGTGATAAATCAGAAA+AGG | + | tig0022394:58836-58855 | Msa1399760:CDS | 35.0% | |
| !!! | AGAGCGGTTTTTTGATATTG+TGG | + | tig0022394:58908-58927 | Msa1399760:CDS | 35.0% |
| ! | CTTGATGTTTCTAACATTCG+TGG | + | tig0022394:59002-59021 | Msa1399760:CDS | 35.0% |
| TTTCTAACATTCGTGGTCAA+GGG | + | tig0022394:59009-59028 | Msa1399760:CDS | 35.0% | |
| ! | TCACTGTTTTGCACATAAGT+TGG | + | tig0022394:59115-59134 | Msa1399760:CDS | 35.0% |
| ! | GACTACATTTGAGTTTGTAC+TGG | + | tig0022394:59493-59512 | Msa1399760:CDS | 35.0% |
| !!! | CATATTTTGAAGTAGTGCTC+TGG | - | tig0022394:59624-59643 | None:intergenic | 35.0% |
| AAAGCTTGGTAAGTATCCTT+AGG | - | tig0022394:59905-59924 | None:intergenic | 35.0% | |
| AAGTCACTAGATATCCTCAT+TGG | + | tig0022394:60632-60651 | Msa1399760:intron | 35.0% | |
| !! | ATATCCTCATTGGTTTCTCT+TGG | + | tig0022394:60642-60661 | Msa1399760:intron | 35.0% |
| GATGAAAAACCAAAACATGG+GGG | - | tig0022394:60728-60747 | None:intergenic | 35.0% | |
| CATATTCCTAGAACCTCTAT+GGG | - | tig0022394:60903-60922 | None:intergenic | 35.0% | |
| ACATATTCCTAGAACCTCTA+TGG | - | tig0022394:60904-60923 | None:intergenic | 35.0% | |
| !!! | ACCTGTTGTAGCAGTTTTTT+GGG | + | tig0022394:61040-61059 | Msa1399760:intron | 35.0% |
| !!! | TGTTTTGACAGCTAGTTACA+AGG | + | tig0022394:61111-61130 | Msa1399760:intron | 35.0% |
| ! | TACAAGGCTTTAATAGAGGA+AGG | + | tig0022394:61127-61146 | Msa1399760:intron | 35.0% |
| ! | ACAAGGCTTTAATAGAGGAA+GGG | + | tig0022394:61128-61147 | Msa1399760:intron | 35.0% |
| AAAGGTTGCAAACTTAAGAG+AGG | - | tig0022394:61230-61249 | None:intergenic | 35.0% | |
| AACTCTGTCAGTGAGTAAAT+GGG | - | tig0022394:61362-61381 | None:intergenic | 35.0% | |
| ATATCATCAGCAACTTGAAG+CGG | - | tig0022394:61416-61435 | None:intergenic | 35.0% | |
| TTGAGGATGACATCTCATTT+AGG | + | tig0022394:61438-61457 | Msa1399760:CDS | 35.0% | |
| GCATCTGAAAATCCAAGATT+GGG | - | tig0022394:61511-61530 | None:intergenic | 35.0% | |
| AGCATCTGAAAATCCAAGAT+TGG | - | tig0022394:61512-61531 | None:intergenic | 35.0% | |
| ! | TGGGAAGCATGAAAATTAGA+TGG | - | tig0022394:61619-61638 | None:intergenic | 35.0% |
| TACTATCTCTAACAGAATGG+TGG | - | tig0022394:61662-61681 | None:intergenic | 35.0% | |
| GTGTACTATCTCTAACAGAA+TGG | - | tig0022394:61665-61684 | None:intergenic | 35.0% | |
| !! | TGTTTTGAATCAATCGGTGA+GGG | - | tig0022394:61744-61763 | None:intergenic | 35.0% |
| ! | TTTTCCACTGGCAATTGTAT+TGG | + | tig0022394:61853-61872 | Msa1399760:intron | 35.0% |
| ATGTGATCATGCATATAGCA+TGG | + | tig0022394:62069-62088 | Msa1399760:intron | 35.0% | |
| TTAGCCTACTGGACATTAAA+TGG | + | tig0022394:62139-62158 | Msa1399760:intron | 35.0% | |
| CAAACCATTTAATGTCCAGT+AGG | - | tig0022394:62146-62165 | None:intergenic | 35.0% | |
| CTACTGGACATTAAATGGTT+TGG | + | tig0022394:62144-62163 | Msa1399760:intron | 35.0% | |
| ! | CTACTTGCTAATAGAAAGGT+AGG | - | tig0022394:62247-62266 | None:intergenic | 35.0% |
| ! | ACACAAAGTATCTGCTGAAA+TGG | - | tig0022394:62321-62340 | None:intergenic | 35.0% |
| ! | TTGCTACAGGTACTTTGAAA+AGG | + | tig0022394:62356-62375 | Msa1399760:intron | 35.0% |
| TATCGTACAACATGCATGAT+AGG | - | tig0022394:62529-62548 | None:intergenic | 35.0% | |
| ATAGAGAGTGACGGTTATAA+GGG | + | tig0022394:62628-62647 | Msa1399760:intron | 35.0% | |
| ATGCTACTGAACACAATACT+TGG | + | tig0022394:62653-62672 | Msa1399760:intron | 35.0% | |
| ! | TCAAACTTCCGCATCTTTTT+AGG | + | tig0022394:62683-62702 | Msa1399760:intron | 35.0% |
| ! | CAAACTTCCGCATCTTTTTA+GGG | + | tig0022394:62684-62703 | Msa1399760:intron | 35.0% |
| ! | TTCAGACGTGTAATGGAATT+TGG | + | tig0022394:62707-62726 | Msa1399760:intron | 35.0% |
| TTGAATTTGTCTGCAAAAGG+GGG | - | tig0022394:62840-62859 | None:intergenic | 35.0% | |
| GTTGAATTTGTCTGCAAAAG+GGG | - | tig0022394:62841-62860 | None:intergenic | 35.0% | |
| CGTTGAATTTGTCTGCAAAA+GGG | - | tig0022394:62842-62861 | None:intergenic | 35.0% | |
| ACGTTGAATTTGTCTGCAAA+AGG | - | tig0022394:62843-62862 | None:intergenic | 35.0% | |
| ! | ATCTTCTCTAGATGCTTTTG+AGG | + | tig0022394:62864-62883 | Msa1399760:CDS | 35.0% |
| TTGTAACCATCTTGACCATA+TGG | + | tig0022394:62945-62964 | Msa1399760:CDS | 35.0% | |
| !!! | ACAATTTTGGGGTTGAGAAG+TGG | - | tig0022394:58436-58455 | None:intergenic | 40.0% |
| CCATTGAAAGAAAAGCCTCT+TGG | - | tig0022394:58635-58654 | None:intergenic | 40.0% | |
| ! | CCAAGAGGCTTTTCTTTCAA+TGG | + | tig0022394:58632-58651 | Msa1399760:CDS | 40.0% |
| TGGTCGAACTTATAGCATCA+TGG | + | tig0022394:58652-58671 | Msa1399760:CDS | 40.0% | |
| GGAAAGATAGGAGTCATTTC+CGG | - | tig0022394:58703-58722 | None:intergenic | 40.0% | |
| ATGACTCCTATCTTTCCAAG+TGG | + | tig0022394:58706-58725 | Msa1399760:CDS | 40.0% | |
| TGACTCCTATCTTTCCAAGT+GGG | + | tig0022394:58707-58726 | Msa1399760:CDS | 40.0% | |
| AAATGGAAATGAAGCCCACT+TGG | - | tig0022394:58724-58743 | None:intergenic | 40.0% | |
| AAGCATATCCGTGACGAAAT+TGG | + | tig0022394:58783-58802 | Msa1399760:CDS | 40.0% | |
| TGGAATCACCAATTTCGTCA+CGG | - | tig0022394:58794-58813 | None:intergenic | 40.0% | |
| GTTTCTAACATTCGTGGTCA+AGG | + | tig0022394:59008-59027 | Msa1399760:CDS | 40.0% | |
| CCATTGTTCTCTCATATCAC+AGG | - | tig0022394:59045-59064 | None:intergenic | 40.0% | |
| CCTGTGATATGAGAGAACAA+TGG | + | tig0022394:59042-59061 | Msa1399760:CDS | 40.0% | |
| CAGTGAATGTAGTATGCAGA+AGG | - | tig0022394:59101-59120 | None:intergenic | 40.0% | |
| ! | ACATAAGTTGGATCTTGCCT+TGG | + | tig0022394:59127-59146 | Msa1399760:CDS | 40.0% |
| GCAGCTAGTAACTTATCATC+GGG | - | tig0022394:59239-59258 | None:intergenic | 40.0% | |
| GGCAGCTAGTAACTTATCAT+CGG | - | tig0022394:59240-59259 | None:intergenic | 40.0% | |
| ATGGGTACTATGCAACAAGT+TGG | + | tig0022394:59326-59345 | Msa1399760:CDS | 40.0% | |
| CTCCGTATGTACCAATATCA+CGG | + | tig0022394:59726-59745 | Msa1399760:CDS | 40.0% | |
| CTCTTGTATTTGCTTGTCGA+TGG | - | tig0022394:59822-59841 | None:intergenic | 40.0% | |
| GAGTCAACAACTCCATTGAT+TGG | - | tig0022394:59865-59884 | None:intergenic | 40.0% | |
| !! | TCAATGGAGTTGTTGACTCT+AGG | + | tig0022394:59866-59885 | Msa1399760:CDS | 40.0% |
| TCCTGCTCATTGAAATCCAT+GGG | - | tig0022394:59968-59987 | None:intergenic | 40.0% | |
| CCAAACATGCACACAATTCT+TGG | - | tig0022394:60072-60091 | None:intergenic | 40.0% | |
| CCAAGAATTGTGTGCATGTT+TGG | + | tig0022394:60069-60088 | Msa1399760:CDS | 40.0% | |
| AAACCGGAAGAGTCATGATA+AGG | - | tig0022394:60144-60163 | None:intergenic | 40.0% | |
| CATTGCTGACGAAGATCTTT+CGG | - | tig0022394:60179-60198 | None:intergenic | 40.0% | |
| ! | CAACTGTGTAGCTCTGTAAA+TGG | + | tig0022394:60349-60368 | Msa1399760:CDS | 40.0% |
| GGAATGTCCAGTGACATATA+AGG | - | tig0022394:60457-60476 | None:intergenic | 40.0% | |
| TCTAGTGACTTCTTGCAAAC+AGG | - | tig0022394:60623-60642 | None:intergenic | 40.0% | |
| CATTCCAAGAGAAACCAATG+AGG | - | tig0022394:60649-60668 | None:intergenic | 40.0% | |
| CTCTACATGATCTTACACAC+AGG | + | tig0022394:60802-60821 | Msa1399760:intron | 40.0% | |
| !!! | GACCTGTTGTAGCAGTTTTT+TGG | + | tig0022394:61039-61058 | Msa1399760:intron | 40.0% |
| ACCCAAAAAACTGCTACAAC+AGG | - | tig0022394:61044-61063 | None:intergenic | 40.0% | |
| AAAGCTGACTGATACTTGTC+AGG | + | tig0022394:61065-61084 | Msa1399760:intron | 40.0% | |
| CAACTCTGTCAGTGAGTAAA+TGG | - | tig0022394:61363-61382 | None:intergenic | 40.0% | |
| CTTGACGAAGAAGAATCTGA+TGG | + | tig0022394:61383-61402 | Msa1399760:CDS | 40.0% | |
| !! | GCTTCAAGTTGCTGATGATA+TGG | + | tig0022394:61415-61434 | Msa1399760:CDS | 40.0% |
| AGTTGCTGATGATATGGTTG+AGG | + | tig0022394:61421-61440 | Msa1399760:CDS | 40.0% | |
| TCTGTTGTGTTACCCAATCT+TGG | + | tig0022394:61496-61515 | Msa1399760:intron | 40.0% | |
| ATCTGGCATATGGGTGAAAT+GGG | - | tig0022394:61638-61657 | None:intergenic | 40.0% | |
| TATCTGGCATATGGGTGAAA+TGG | - | tig0022394:61639-61658 | None:intergenic | 40.0% | |
| AATGGTGGTATCTGGCATAT+GGG | - | tig0022394:61647-61666 | None:intergenic | 40.0% | |
| TCTAACAGAATGGTGGTATC+TGG | - | tig0022394:61655-61674 | None:intergenic | 40.0% | |
| ATGACTTCTTCTCGCAAAGA+GGG | - | tig0022394:61710-61729 | None:intergenic | 40.0% | |
| AATGACTTCTTCTCGCAAAG+AGG | - | tig0022394:61711-61730 | None:intergenic | 40.0% | |
| !! | CTGTTTTGAATCAATCGGTG+AGG | - | tig0022394:61745-61764 | None:intergenic | 40.0% |
| TTGTCCAATACAATTGCCAG+TGG | - | tig0022394:61860-61879 | None:intergenic | 40.0% | |
| ! | AGATGAAGTCATGTGCCTTT+TGG | - | tig0022394:61898-61917 | None:intergenic | 40.0% |
| GCAATGTTAAGGGACTGATT+TGG | - | tig0022394:62106-62125 | None:intergenic | 40.0% | |
| AGCTTAAGCATAGAGAGTGA+CGG | + | tig0022394:62619-62638 | Msa1399760:intron | 40.0% | |
| CATAGAGAGTGACGGTTATA+AGG | + | tig0022394:62627-62646 | Msa1399760:intron | 40.0% | |
| GTCTGAACCCTAAAAAGATG+CGG | - | tig0022394:62694-62713 | None:intergenic | 40.0% | |
| ! | TTTAGGGTTCAGACGTGTAA+TGG | + | tig0022394:62700-62719 | Msa1399760:intron | 40.0% |
| TGAATTTGTCTGCAAAAGGG+GGG | - | tig0022394:62839-62858 | None:intergenic | 40.0% | |
| GTTTCCAAGTCTGATGAATC+CGG | + | tig0022394:62892-62911 | Msa1399760:CDS | 40.0% | |
| TAAATCCTGGTCATCTTGTC+CGG | - | tig0022394:62914-62933 | None:intergenic | 40.0% | |
| !! | CTCTTGGTGTCTTTGTTCAG+CGG | - | tig0022394:58619-58638 | None:intergenic | 45.0% |
| !! | GAATTTTCCCAAGCCTTGTC+CGG | + | tig0022394:58681-58700 | Msa1399760:CDS | 45.0% |
| ATAGGAGTCATTTCCGGACA+AGG | - | tig0022394:58697-58716 | None:intergenic | 45.0% | |
| TGAAGCCCACTTGGAAAGAT+AGG | - | tig0022394:58715-58734 | None:intergenic | 45.0% | |
| AAGTTGGATCTTGCCTTGGT+TGG | + | tig0022394:59131-59150 | Msa1399760:CDS | 45.0% | |
| TTCTGTTGATGCACCAACCA+AGG | - | tig0022394:59147-59166 | None:intergenic | 45.0% | |
| GAAACCAGAGAGCTTGAAAC+TGG | + | tig0022394:59287-59306 | Msa1399760:CDS | 45.0% | |
| TTCACCAGTTTCAAGCTCTC+TGG | - | tig0022394:59294-59313 | None:intergenic | 45.0% | |
| AGAGAGCTTGAAACTGGTGA+AGG | + | tig0022394:59293-59312 | Msa1399760:CDS | 45.0% | |
| GAGAGCTTGAAACTGGTGAA+GGG | + | tig0022394:59294-59313 | Msa1399760:CDS | 45.0% | |
| AGAGCTTGAAACTGGTGAAG+GGG | + | tig0022394:59295-59314 | Msa1399760:CDS | 45.0% | |
| !! | ACATACGGAGCATTGAACTG+AGG | - | tig0022394:59716-59735 | None:intergenic | 45.0% |
| CGCCGTGATATTGGTACATA+CGG | - | tig0022394:59731-59750 | None:intergenic | 45.0% | |
| CAGGTTCAGTGACCAATCAA+TGG | + | tig0022394:59850-59869 | Msa1399760:CDS | 45.0% | |
| TCCCATGGATTTCAATGAGC+AGG | + | tig0022394:59964-59983 | Msa1399760:CDS | 45.0% | |
| CTCCTGCTCATTGAAATCCA+TGG | - | tig0022394:59969-59988 | None:intergenic | 45.0% | |
| GACGAAGATCTTTCGGTTGT+GGG | - | tig0022394:60172-60191 | None:intergenic | 45.0% | |
| TGACGAAGATCTTTCGGTTG+TGG | - | tig0022394:60173-60192 | None:intergenic | 45.0% | |
| ! | CTGTGTAGCTCTGTAAATGG+TGG | + | tig0022394:60352-60371 | Msa1399760:CDS | 45.0% |
| GTGTGTATGTGTGTGTGTCT+AGG | - | tig0022394:60556-60575 | None:intergenic | 45.0% | |
| TGTAGACCCATAGAGGTTCT+AGG | + | tig0022394:60894-60913 | Msa1399760:intron | 45.0% | |
| CTACAACAGGTCTAGTGCTA+GGG | - | tig0022394:61031-61050 | None:intergenic | 45.0% | |
| ! | GGCTTTAATAGAGGAAGGGA+AGG | + | tig0022394:61132-61151 | Msa1399760:intron | 45.0% |
| ATAGAGGAAGGGAAGGTCTA+TGG | + | tig0022394:61139-61158 | Msa1399760:intron | 45.0% | |
| GAATGGTGGTATCTGGCATA+TGG | - | tig0022394:61648-61667 | None:intergenic | 45.0% | |
| TTGAATCAATCGGTGAGGGA+TGG | - | tig0022394:61740-61759 | None:intergenic | 45.0% | |
| !! | TCGTGTAGCTTTGCCTTTTG+TGG | + | tig0022394:61788-61807 | Msa1399760:intron | 45.0% |
| !! | CGTGTAGCTTTGCCTTTTGT+GGG | + | tig0022394:61789-61808 | Msa1399760:intron | 45.0% |
| ACAGACATTGTGCCCACAAA+AGG | - | tig0022394:61804-61823 | None:intergenic | 45.0% | |
| AAGTGTACCAAACTTGGGTG+TGG | + | tig0022394:62200-62219 | Msa1399760:CDS | 45.0% | |
| TAAGGCAAGGCTCAAGAGTA+TGG | - | tig0022394:62447-62466 | None:intergenic | 45.0% | |
| GGAGAAGAAACAACTACAGC+TGG | - | tig0022394:62508-62527 | None:intergenic | 45.0% | |
| TTGTCCGGATTCATCAGACT+TGG | - | tig0022394:62899-62918 | None:intergenic | 45.0% | |
| CGCTGAACAAAGACACCAAG+AGG | + | tig0022394:58617-58636 | Msa1399760:CDS | 50.0% | |
| GTCATTTCCGGACAAGGCTT+GGG | - | tig0022394:58691-58710 | None:intergenic | 50.0% | |
| AGTCATTTCCGGACAAGGCT+TGG | - | tig0022394:58692-58711 | None:intergenic | 50.0% | |
| TGGTGAAGGGGAAGATCGTA+TGG | + | tig0022394:59307-59326 | Msa1399760:CDS | 50.0% | |
| GGTGAAGGGGAAGATCGTAT+GGG | + | tig0022394:59308-59327 | Msa1399760:CDS | 50.0% | |
| ! | GTTGACTCTAGGCTCTGCTT+TGG | + | tig0022394:59877-59896 | Msa1399760:CDS | 50.0% |
| ! | AGGCTCTGCTTTGGTTCCTA+AGG | + | tig0022394:59886-59905 | Msa1399760:CDS | 50.0% |
| CCGGAAGAGTCATGATAAGG+CGG | - | tig0022394:60141-60160 | None:intergenic | 50.0% | |
| CCGCCTTATCATGACTCTTC+CGG | + | tig0022394:60138-60157 | Msa1399760:CDS | 50.0% | |
| TCGGTTGTGGGTGTAGAAAC+CGG | - | tig0022394:60160-60179 | None:intergenic | 50.0% | |
| ! | GGTGGCATTGAAAGACCATC+AGG | + | tig0022394:60370-60389 | Msa1399760:CDS | 50.0% |
| ! | GTCTGATAGCCCCCATGTTT+TGG | + | tig0022394:60716-60735 | Msa1399760:intron | 50.0% |
| GCTACAACAGGTCTAGTGCT+AGG | - | tig0022394:61032-61051 | None:intergenic | 50.0% | |
| AGCTCTCATGAGCTTGCACT+AGG | + | tig0022394:61164-61183 | Msa1399760:intron | 50.0% | |
| TCAGCAACTTGAAGCGGAAC+AGG | - | tig0022394:61410-61429 | None:intergenic | 50.0% | |
| CTTGCTTCCACACCCAAGTT+TGG | - | tig0022394:62210-62229 | None:intergenic | 50.0% | |
| TGAATCCGGACAAGATGACC+AGG | + | tig0022394:62906-62925 | Msa1399760:CDS | 50.0% | |
| GTGCGCGCGCGCAATACAAA+AGG | + | tig0022394:60685-60704 | Msa1399760:intron | 60.0% | |
| CGACGAGCGCGCCGTGATAT+TGG | - | tig0022394:59740-59759 | None:intergenic | 65.0% | |
| ACGGCGCGCTCGTCGCGAAC+AGG | + | tig0022394:59745-59764 | Msa1399760:CDS | 75.0% | |
| GCGCGCTCGTCGCGAACAGG+TGG | + | tig0022394:59748-59767 | Msa1399760:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022394 | gene | 58360 | 62972 | 58360 | ID=Msa1399760;Name=Msa1399760 |
| tig0022394 | mRNA | 58360 | 62972 | 58360 | ID=Msa1399760-mRNA-1;Parent=Msa1399760;Name=Msa1399760-mRNA-1;_AED=0.41;_eAED=0.41;_QI=0|0.66|0.25|0.75|1|1|4|0|761 |
| tig0022394 | exon | 58360 | 60391 | 58360 | ID=Msa1399760-mRNA-1:exon:17363;Parent=Msa1399760-mRNA-1 |
| tig0022394 | exon | 61378 | 61459 | 61378 | ID=Msa1399760-mRNA-1:exon:17364;Parent=Msa1399760-mRNA-1 |
| tig0022394 | exon | 62188 | 62236 | 62188 | ID=Msa1399760-mRNA-1:exon:17365;Parent=Msa1399760-mRNA-1 |
| tig0022394 | exon | 62850 | 62972 | 62850 | ID=Msa1399760-mRNA-1:exon:17366;Parent=Msa1399760-mRNA-1 |
| tig0022394 | CDS | 58360 | 60391 | 58360 | ID=Msa1399760-mRNA-1:cds;Parent=Msa1399760-mRNA-1 |
| tig0022394 | CDS | 61378 | 61459 | 61378 | ID=Msa1399760-mRNA-1:cds;Parent=Msa1399760-mRNA-1 |
| tig0022394 | CDS | 62188 | 62236 | 62188 | ID=Msa1399760-mRNA-1:cds;Parent=Msa1399760-mRNA-1 |
| tig0022394 | CDS | 62850 | 62972 | 62850 | ID=Msa1399760-mRNA-1:cds;Parent=Msa1399760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
