AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0707320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0707320 MtrunA17_Chr8g0388341 97.647 85 1 1 1 85 1 84 4.51e-56 186
Msa0707320 MtrunA17_Chr7g0271951 42.857 56 29 1 29 81 420 475 4.60e-12 60.5
Msa0707320 MtrunA17_Chr4g0061801 42.373 59 26 2 35 88 34 89 7.98e-11 57.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0707320 AT4G10930.2 64.706 85 26 1 1 85 1 81 2.55e-36 130
Msa0707320 AT4G10930.1 64.706 85 26 1 1 85 1 81 2.55e-36 130
Msa0707320 AT3G05670.3 38.750 80 43 2 8 81 383 462 1.18e-14 68.6
Msa0707320 AT3G05670.1 38.750 80 43 2 8 81 383 462 1.18e-14 68.6
Msa0707320 AT3G05670.2 38.750 80 43 2 8 81 383 462 1.18e-14 68.6

Find 320 sgRNAs with CRISPR-Local

Find 780 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGGGAGCTCGCTCTGATTC+TGG 0.072097 4_4:+80553790 None:intergenic
TAATTTCCTTCCTTAGATTT+TGG 0.133665 4_4:+80554157 None:intergenic
CTGTGCATATTTAGCTAAAA+TGG 0.151667 4_4:-80550372 Msa0707320:three_prime_UTR
AGGCCTCTCTCACTTGTTTC+TGG 0.153394 4_4:+80556618 None:intergenic
CATTCACTGTTAGTATTATC+TGG 0.160173 4_4:+80556726 None:intergenic
TTTATAAGTGGTTCTTTATC+AGG 0.190528 4_4:+80551470 None:intergenic
TGAATCACAATATACGATTT+TGG 0.191567 4_4:-80560663 Msa0707320:five_prime_UTR
CTTTCACAGAATCAGATTTA+AGG 0.198788 4_4:+80553443 None:intergenic
CTTCGTGCATAGCGATTTAA+AGG 0.212127 4_4:-80556439 Msa0707320:three_prime_UTR
AAAATCTTCTCGAAGCCTTT+AGG 0.231661 4_4:-80554080 Msa0707320:three_prime_UTR
TGAAAGGTGATAAAAGAAAA+TGG 0.240611 4_4:-80553426 Msa0707320:three_prime_UTR
TAATTCGTAACAGGATAATT+TGG 0.241541 4_4:-80560389 Msa0707320:intron
GGCCAGCCTTCCGTTTCTTC+TGG 0.249709 4_4:-80551554 Msa0707320:three_prime_UTR
GATATAATGAATATAGTTAA+AGG 0.267083 4_4:-80554321 Msa0707320:three_prime_UTR
CCTTCCAAAGGAAAGTCTTC+TGG 0.270839 4_4:+80556091 None:intergenic
TCATCGGTCCCGGATGTATT+AGG 0.271710 4_4:+80551266 None:intergenic
TTCATTTAATATAACTCTTC+AGG 0.275055 4_4:-80559929 Msa0707320:intron
GCTTTGTATGTATTGACAAC+TGG 0.277151 4_4:-80560055 Msa0707320:CDS
ATGCAAAATTGAATCTGATA+TGG 0.280001 4_4:-80556334 Msa0707320:three_prime_UTR
GGGTCTTCATCTTGGTTTAT+CGG 0.282538 4_4:-80556313 Msa0707320:three_prime_UTR
CTGGCCAATCTCTGCATTAA+TGG 0.289046 4_4:+80551571 None:intergenic
AGTCGCGTTCTTCTTCCTTA+TGG 0.300027 4_4:+80551372 None:intergenic
GCAAGTGTTGAAGAAGATTC+TGG 0.303824 4_4:-80558475 Msa0707320:three_prime_UTR
AAATCTTCTCGAAGCCTTTA+GGG 0.304999 4_4:-80554079 Msa0707320:three_prime_UTR
TTGTATTGGCAGATTCTATA+GGG 0.312349 4_4:-80550289 Msa0707320:three_prime_UTR
GTCTCATATCAGTTGGCAAT+TGG 0.314592 4_4:+80553196 None:intergenic
GCCTTTAGGGCTGCTATAAC+AGG 0.315732 4_4:-80554066 Msa0707320:three_prime_UTR
AACAGATGGCAATTCAATAA+AGG 0.316631 4_4:-80556769 Msa0707320:three_prime_UTR
TCAGAATTTGAAGATTTATA+CGG 0.316787 4_4:-80551494 Msa0707320:three_prime_UTR
TGTGATTCAATTTGTGAAAC+TGG 0.321978 4_4:+80560677 None:intergenic
TCTGGAAAGAATTGGATTCT+TGG 0.322471 4_4:+80553759 None:intergenic
CGGGAGCTCGCTCTGATTCT+GGG 0.327606 4_4:+80553791 None:intergenic
TGATTCCGAGAAAGAATATT+CGG 0.329555 4_4:-80550451 Msa0707320:three_prime_UTR
GGGATTGTGAAATTGAGTTT+TGG 0.333583 4_4:-80553900 Msa0707320:three_prime_UTR
CATTAATGGTGGAATCCTTC+TGG 0.335776 4_4:+80551585 None:intergenic
GAAGCTTCAGCCGATAGTTC+GGG 0.337441 4_4:+80554474 None:intergenic
CCTACATCAAGGAGCATATC+AGG 0.338678 4_4:-80550834 Msa0707320:three_prime_UTR
CCTCACTAGTCCAAAATCTA+AGG 0.343630 4_4:-80554167 Msa0707320:three_prime_UTR
TAGATTTGACACCATGAAAA+TGG 0.344866 4_4:-80550498 Msa0707320:three_prime_UTR
GGCCTTCGAATTTCCGTGCC+TGG 0.345116 4_4:-80560721 Msa0707320:five_prime_UTR
GGTGCTACATTGCGAACAAT+AGG 0.351220 4_4:-80550477 Msa0707320:three_prime_UTR
TTGAGGATGAAATGGTGATA+TGG 0.351345 4_4:+80550622 None:intergenic
TGAAGCTTCAGCCGATAGTT+CGG 0.351589 4_4:+80554473 None:intergenic
TGGATTCTTGGCCTGACATT+CGG 0.351968 4_4:+80553771 None:intergenic
CTTTCCCGAATATTCTTTCT+CGG 0.354466 4_4:+80550446 None:intergenic
TGATCAACTGAAACTCATTC+TGG 0.363424 4_4:+80560003 None:intergenic
CTTGCGATTCATGTGATCTA+TGG 0.364336 4_4:-80558435 Msa0707320:intron
TGAAGCTTCAACCGATAGTT+CGG 0.367125 4_4:+80554602 None:intergenic
GACTTAGACAAAGCAGTAAA+TGG 0.369446 4_4:-80551353 Msa0707320:three_prime_UTR
CAACGTCACACCTAACAAAA+AGG 0.369654 4_4:+80550568 None:intergenic
TATTATCTGGGTTAAATTCC+AGG 0.369880 4_4:+80556739 None:intergenic
GATGCTGCAATCTCCTTTGT+TGG 0.370503 4_4:+80554345 None:intergenic
TCGAATTTCCGTGCCTGGAT+TGG 0.370969 4_4:-80560716 Msa0707320:five_prime_UTR
ATATACAATCTGGAAAGAAT+TGG 0.372942 4_4:+80553751 None:intergenic
GCATCAGTTTCTTCTTCAGC+TGG 0.373052 4_4:-80553493 Msa0707320:three_prime_UTR
GAATGCTAATTTCCTCATAA+AGG 0.377921 4_4:-80550716 Msa0707320:three_prime_UTR
CGTGAACCGAGTAGCTTTGA+TGG 0.379852 4_4:-80556396 Msa0707320:three_prime_UTR
GGATTCTTGGCCTGACATTC+GGG 0.380821 4_4:+80553772 None:intergenic
TTTCTGGAATCCATTTGTTT+CGG 0.382216 4_4:+80556634 None:intergenic
CTTTCTCACCTTCCTTTATG+AGG 0.383794 4_4:+80550704 None:intergenic
GGTTATTGACAGGGGAGTAT+TGG 0.388180 4_4:-80560329 Msa0707320:CDS
TCTGATATGGGTCTTCATCT+TGG 0.392960 4_4:-80556321 Msa0707320:three_prime_UTR
TTTGTATTGGCAGATTCTAT+AGG 0.394537 4_4:-80550290 Msa0707320:three_prime_UTR
TTTCTCAGATAAACAAACTT+TGG 0.395771 4_4:+80553579 None:intergenic
TCTTCAAATTCTGAATCAAC+TGG 0.396421 4_4:+80551503 None:intergenic
TACATATTTCATTGTTCTTG+TGG 0.397541 4_4:+80551903 None:intergenic
CATTTGACTAGCAGCTGCTC+TGG 0.397549 4_4:+80554440 None:intergenic
CATTTGACTAGCAGCTGCTC+TGG 0.397549 4_4:+80554569 None:intergenic
TCCACCATTAATGCAGAGAT+TGG 0.398293 4_4:-80551575 Msa0707320:three_prime_UTR
TGCACGAAGGATTTAGAAGT+TGG 0.400122 4_4:+80556453 None:intergenic
TTGTCATCAACAGATTGATT+TGG 0.401400 4_4:+80553643 None:intergenic
CAAATCCTCTATAAACTTTG+AGG 0.403161 4_4:-80554118 Msa0707320:three_prime_UTR
AGATTCCTTTGTGCCAACTT+TGG 0.404039 4_4:+80553468 None:intergenic
ACAGATGGCAATTCAATAAA+GGG 0.406400 4_4:-80556768 Msa0707320:three_prime_UTR
TTCAACTTTATTGCTCCCTA+TGG 0.408089 4_4:+80559731 None:intergenic
TTTGTAGGCAGTTACTTGCT+TGG 0.409234 4_4:-80558530 Msa0707320:intron
GAAGAAAACAAATAATGCTT+TGG 0.415132 4_4:-80551690 Msa0707320:three_prime_UTR
AAAGTTGGCACAAAGGAATC+TGG 0.416752 4_4:-80553466 Msa0707320:three_prime_UTR
CTTACCTGCCTCACGGATAC+AGG 0.418225 4_4:+80553141 None:intergenic
TTCAACGCTATTTGAACTGC+AGG 0.418515 4_4:+80551965 None:intergenic
AATGATTGTAATTCACCATC+TGG 0.419965 4_4:+80551440 None:intergenic
ATGTGGAATATGTATGGATA+TGG 0.420646 4_4:-80560350 Msa0707320:CDS
AGTTGTGTCTGTGTTTATGT+TGG 0.421385 4_4:+80552057 None:intergenic
GAAGCTTCAACCGATAGTTC+GGG 0.423173 4_4:+80554603 None:intergenic
ACATATTTCATTGTTCTTGT+GGG 0.424032 4_4:+80551904 None:intergenic
TGTTTAGTCTGTTCCGAGAA+AGG 0.424635 4_4:+80553688 None:intergenic
GATTCCAGAAGACTTTCCTT+TGG 0.426336 4_4:-80556095 Msa0707320:three_prime_UTR
TTGTTCTTGTGGGGACTGCT+TGG 0.427164 4_4:+80551914 None:intergenic
CATCAACTTCAGGAGGCAAT+AGG 0.428681 4_4:+80556598 None:intergenic
TGTATCTGCTATATACAATC+TGG 0.430477 4_4:+80553741 None:intergenic
TGCACGCTTTCTTCTACCAT+TGG 0.430540 4_4:+80553930 None:intergenic
TCTTCAGCTGGTGCCAAAGT+TGG 0.431339 4_4:-80553481 Msa0707320:three_prime_UTR
TGTAATGAAAAGGAAGTGTC+AGG 0.431539 4_4:-80551884 Msa0707320:three_prime_UTR
ACTGCATCTCTGTGACAGTT+TGG 0.432384 4_4:+80551608 None:intergenic
GTCTGTGTCCATTGCTGATA+CGG 0.433476 4_4:-80556688 Msa0707320:three_prime_UTR
TGTGCATATTTAGCTAAAAT+GGG 0.433604 4_4:-80550371 Msa0707320:three_prime_UTR
GGAAACATGTGGAATATGTA+TGG 0.436547 4_4:-80560356 Msa0707320:CDS
CAGGATAATTTGGACGTTGA+AGG 0.438552 4_4:-80560379 Msa0707320:CDS
ATCGATAACGCGATTCTGAA+TGG 0.440194 4_4:-80560613 Msa0707320:exon
CCCTGTTATAGCAGCCCTAA+AGG 0.443432 4_4:+80554065 None:intergenic
TTTGGATAGTGCAGACTGTA+AGG 0.443762 4_4:-80551672 Msa0707320:three_prime_UTR
TCTCATATCAGTTGGCAATT+GGG 0.444054 4_4:+80553197 None:intergenic
TATTGCCTCCTGAAGTTGAT+GGG 0.446085 4_4:-80556596 Msa0707320:three_prime_UTR
GAAGAAAGCGTGCATGGGAT+AGG 0.446500 4_4:-80553921 Msa0707320:three_prime_UTR
TGCAAAATTGAATCTGATAT+GGG 0.448382 4_4:-80556333 Msa0707320:three_prime_UTR
CTATTGCCTCCTGAAGTTGA+TGG 0.451632 4_4:-80556597 Msa0707320:three_prime_UTR
ATGAAGAGAGTTTCTGATGA+TGG 0.452594 4_4:-80554198 Msa0707320:three_prime_UTR
TTGAAGATGGCTCATTCCTC+AGG 0.453779 4_4:-80559713 Msa0707320:intron
AGCAAACCTCCTAATACATC+CGG 0.453834 4_4:-80551275 Msa0707320:three_prime_UTR
TTCTTTGCCTTCAGAGCTGA+AGG 0.455017 4_4:+80554012 None:intergenic
TTCTTGTGGGGACTGCTTGG+AGG 0.456656 4_4:+80551917 None:intergenic
CAAAATAATCCGTCAGCAAA+AGG 0.457161 4_4:-80553667 Msa0707320:three_prime_UTR
CAATGGTTGACCGAAACAAA+TGG 0.457635 4_4:-80556644 Msa0707320:three_prime_UTR
GTATGGATATGGTTATTGAC+AGG 0.458801 4_4:-80560339 Msa0707320:CDS
TCATTGTTTGACTTCTGGGC+AGG 0.459693 4_4:+80551209 None:intergenic
GATTCCGAGAAAGAATATTC+GGG 0.460757 4_4:-80550450 Msa0707320:three_prime_UTR
AAAACTTGTTGAGGATGAAA+TGG 0.461442 4_4:+80550614 None:intergenic
AGGATAATTTGGACGTTGAA+GGG 0.461659 4_4:-80560378 Msa0707320:CDS
GCAGTAAATGGTGCTGAAGT+AGG 0.462919 4_4:-80551341 Msa0707320:three_prime_UTR
GATTTAAAGGAAAGTGATAA+TGG 0.463962 4_4:-80556426 Msa0707320:three_prime_UTR
GTGTCCGACATTAACTTACA+TGG 0.464150 4_4:+80556558 None:intergenic
CGCAAATTTATATGACTCAC+TGG 0.464862 4_4:+80559972 None:intergenic
TTTAAAACATTCTCCAACAA+AGG 0.466040 4_4:-80554358 Msa0707320:three_prime_UTR
AGAGGATGTCAAACCTTTCT+CGG 0.466789 4_4:-80553701 Msa0707320:three_prime_UTR
AGAGCGAGCTCCCGAATGTC+AGG 0.468530 4_4:-80553782 Msa0707320:three_prime_UTR
GAACACAGCAAATGAAAGTC+AGG 0.475761 4_4:-80553362 Msa0707320:three_prime_UTR
CTTCATCTTGGTTTATCGGT+GGG 0.477646 4_4:-80556309 Msa0707320:three_prime_UTR
GAAAAGAAAGAAAACATGAC+TGG 0.479402 4_4:-80554240 Msa0707320:three_prime_UTR
GAGAGCTTCAAAACCTGAAA+AGG 0.481141 4_4:-80553863 Msa0707320:three_prime_UTR
TGAAACTCATTCTGGCAAAG+TGG 0.481558 4_4:+80560011 None:intergenic
ATATAATGAATATAGTTAAA+GGG 0.482474 4_4:-80554320 Msa0707320:three_prime_UTR
CATTGTTTGACTTCTGGGCA+GGG 0.482806 4_4:+80551210 None:intergenic
AACAGATCCCCATCAACTTC+AGG 0.482991 4_4:+80556588 None:intergenic
CAATGAAATATGTAATGAAA+AGG 0.483896 4_4:-80551894 Msa0707320:three_prime_UTR
GACAGCTGTGGTTGTCTCAA+TGG 0.485598 4_4:-80556661 Msa0707320:three_prime_UTR
ATTCACTGTTAGTATTATCT+GGG 0.485781 4_4:+80556727 None:intergenic
CCTCTTTCTACCAGCCACTC+TGG 0.486616 4_4:+80555881 None:intergenic
CCAGAAGACTTTCCTTTGGA+AGG 0.487768 4_4:-80556091 Msa0707320:intron
GGTGAGCAAGAGGCACCTCC+TGG 0.488201 4_4:+80551629 None:intergenic
TGATAAAAGAAAATGGGCCT+TGG 0.488612 4_4:-80553419 Msa0707320:three_prime_UTR
GAAAGGTGATAAAAGAAAAT+GGG 0.488760 4_4:-80553425 Msa0707320:three_prime_UTR
GTGCTACATTGCGAACAATA+GGG 0.489739 4_4:-80550476 Msa0707320:three_prime_UTR
ATGATGACTGGTCGATTGAC+GGG 0.490445 4_4:-80559296 Msa0707320:three_prime_UTR
GTCCAGAAGAAACGGAAGGC+TGG 0.493839 4_4:+80551552 None:intergenic
TGAAAATCAAGTAGTGAAGA+AGG 0.495591 4_4:-80551189 Msa0707320:intron
TTGTCGTTGGCATCATCAAA+TGG 0.495748 4_4:+80560543 None:intergenic
CAGTGAGTCATATAAATTTG+CGG 0.497778 4_4:-80559971 Msa0707320:CDS
GTTACTTGCTTGGATGGTGA+TGG 0.499617 4_4:-80558520 Msa0707320:three_prime_UTR
GTGCAGTGTGATTCATTCGC+TGG 0.500096 4_4:-80550414 Msa0707320:three_prime_UTR
AATTCCTGTATCCGTGAGGC+AGG 0.501209 4_4:-80553145 Msa0707320:intron
TCTAGTTCAAGTATATCATC+AGG 0.502187 4_4:+80551860 None:intergenic
CGAGAATAATGATTGCCATA+AGG 0.502487 4_4:-80551387 Msa0707320:three_prime_UTR
GATGGCTGCAAAATTCGAAA+TGG 0.503330 4_4:-80558502 Msa0707320:three_prime_UTR
AGATGCTATTAATATTGAAA+AGG 0.504588 4_4:-80552164 Msa0707320:three_prime_UTR
CAGTAAATGGTGCTGAAGTA+GGG 0.505019 4_4:-80551340 Msa0707320:three_prime_UTR
TAAAAGAAAATGGGCCTTGG+AGG 0.505512 4_4:-80553416 Msa0707320:three_prime_UTR
TTATAAGTGGTTCTTTATCA+GGG 0.505721 4_4:+80551471 None:intergenic
TCTTCAATAAGCGTTCCGTC+AGG 0.505803 4_4:+80552239 None:intergenic
CTTAATTGTACTTTACCAGC+TGG 0.506554 4_4:+80553532 None:intergenic
TAGGCAGTTACTTGCTTGGA+TGG 0.508085 4_4:-80558526 Msa0707320:three_prime_UTR
TTCTGATTGATCAGTTTGCA+CGG 0.508147 4_4:+80552015 None:intergenic
GATGATGACTGGTCGATTGA+CGG 0.511297 4_4:-80559297 Msa0707320:three_prime_UTR
CTTTGTATGTATTGACAACT+GGG 0.512954 4_4:-80560054 Msa0707320:CDS
AGTATCAAATCCCACACAAA+AGG 0.513757 4_4:+80557878 None:intergenic
GTGAAGGTATATGATACCAT+AGG 0.518587 4_4:-80559747 Msa0707320:intron
TCTTCATCTTGGTTTATCGG+TGG 0.519376 4_4:-80556310 Msa0707320:three_prime_UTR
TATTGGATTGCTGTCAGCAC+TGG 0.521780 4_4:-80560312 Msa0707320:intron
AAGATTGTACGTGGTCCAGC+TGG 0.523778 4_4:-80553547 Msa0707320:three_prime_UTR
TTCAACCGATAGTTCGGGGT+TGG 0.525228 4_4:+80554608 None:intergenic
GCACGAAGGATTTAGAAGTT+GGG 0.526215 4_4:+80556454 None:intergenic
ATCTTATACATTCCTCCTCA+TGG 0.526342 4_4:-80550323 Msa0707320:three_prime_UTR
AATGGACACAGACACTATTC+CGG 0.526465 4_4:+80556698 None:intergenic
TGAAGAGTTATATTAAATGA+AGG 0.528442 4_4:+80559931 None:intergenic
CAAGTCCCTTGGAAAGCTTA+CGG 0.528945 4_4:+80554292 None:intergenic
GTTATCCCCTTCAGCTCTGA+AGG 0.529362 4_4:-80554019 Msa0707320:three_prime_UTR
ATTGGACTCATCAAATAACT+TGG 0.529746 4_4:+80556371 None:intergenic
AAGAAAGCGTGCATGGGATA+GGG 0.529759 4_4:-80553920 Msa0707320:three_prime_UTR
GGAGGTTTGCTAGTGATGGT+AGG 0.529923 4_4:+80551287 None:intergenic
AAGAAAACATGACTGGGTTG+AGG 0.531917 4_4:-80554233 Msa0707320:three_prime_UTR
TGGTAGGAGTCCAGAAGAAA+CGG 0.532812 4_4:+80551544 None:intergenic
TGAGGATGAAATGGTGATAT+GGG 0.533092 4_4:+80550623 None:intergenic
TTCAGCCGATAGTTCGGGGT+TGG 0.533439 4_4:+80554479 None:intergenic
GATGACAGTGCCAGAGTGGC+TGG 0.534895 4_4:-80555891 Msa0707320:three_prime_UTR
GTTAGGGATCTTTGTAACAC+TGG 0.536237 4_4:+80551769 None:intergenic
AGTCTTCTGGAATCGAGCAC+GGG 0.536505 4_4:+80556104 None:intergenic
CCTGATATGCTCCTTGATGT+AGG 0.537367 4_4:+80550834 None:intergenic
AGTTCTTCTCCCTTCATGAT+CGG 0.538187 4_4:+80556495 None:intergenic
GAGGTTTGCTAGTGATGGTA+GGG 0.539545 4_4:+80551288 None:intergenic
CATATTTCATTGTTCTTGTG+GGG 0.541455 4_4:+80551905 None:intergenic
TTCAATTTGTGAAACTGGAA+GGG 0.541834 4_4:+80560682 None:intergenic
CCAGAGTGGCTGGTAGAAAG+AGG 0.542880 4_4:-80555881 Msa0707320:three_prime_UTR
CTTAAATCTGATTCTGTGAA+AGG 0.542950 4_4:-80553442 Msa0707320:three_prime_UTR
CTTCTTGGTACAGCATACAT+AGG 0.544314 4_4:+80550184 None:intergenic
AGATGCCAACCCCGAACTAT+CGG 0.544658 4_4:-80554484 Msa0707320:three_prime_UTR
ATTAGGAGGTTTGCTAGTGA+TGG 0.546641 4_4:+80551283 None:intergenic
AGAGGAAGTTACATTGTCGT+TGG 0.546781 4_4:+80560530 None:intergenic
ATGGTAGAAGAAAGCGTGCA+TGG 0.547779 4_4:-80553927 Msa0707320:three_prime_UTR
AAACTCGCGGAGCAGTATGT+TGG 0.547918 4_4:-80550676 Msa0707320:three_prime_UTR
AGAAAACATGACTGGGTTGA+GGG 0.548051 4_4:-80554232 Msa0707320:three_prime_UTR
GAAACTCATTCTGGCAAAGT+GGG 0.548840 4_4:+80560012 None:intergenic
ATTATCTGGGTTAAATTCCA+GGG 0.551587 4_4:+80556740 None:intergenic
TGATCACGGCTGAACAGTAC+AGG 0.553038 4_4:-80550792 Msa0707320:three_prime_UTR
TGCTATTAATATTGAAAAGG+AGG 0.553296 4_4:-80552161 Msa0707320:three_prime_UTR
GGGAGCAATAAAGTTGAAGA+TGG 0.554268 4_4:-80559726 Msa0707320:three_prime_UTR
TCTGCAGTTCTACGAATGAT+TGG 0.555363 4_4:+80552205 None:intergenic
GCTAATTTCCTCATAAAGGA+AGG 0.555452 4_4:-80550712 Msa0707320:three_prime_UTR
ACTAGAATCTCATCCCGAGC+TGG 0.555715 4_4:-80551843 Msa0707320:three_prime_UTR
CTTTGCCTTCAGAGCTGAAG+GGG 0.557451 4_4:+80554014 None:intergenic
TCTGAAAACAATGAAGTGCC+AGG 0.557715 4_4:-80551647 Msa0707320:three_prime_UTR
CGATGAAAATATTCGAAGGA+AGG 0.557810 4_4:-80551249 Msa0707320:three_prime_UTR
AGATGCCAACCCCGAACTAT+CGG 0.558854 4_4:-80554613 Msa0707320:three_prime_UTR
GGATAATTTGGACGTTGAAG+GGG 0.562397 4_4:-80560377 Msa0707320:CDS
GGACACAAATAATCAGCTGC+AGG 0.564443 4_4:-80556541 Msa0707320:three_prime_UTR
AAAGATGAATTGCAATGGGA+AGG 0.570625 4_4:-80550152 Msa0707320:three_prime_UTR
GATAAATTACGTACAAGCAA+AGG 0.571388 4_4:+80553310 None:intergenic
TTGGATAGTGCAGACTGTAA+GGG 0.571843 4_4:-80551671 Msa0707320:three_prime_UTR
TCAATAAGCGTTCCGTCAGG+CGG 0.572262 4_4:+80552242 None:intergenic
ATTCAATTTGTGAAACTGGA+AGG 0.573285 4_4:+80560681 None:intergenic
AACTGTGTCACCGATCATGA+AGG 0.573404 4_4:-80556505 Msa0707320:three_prime_UTR
AAGTCTTCTGGAATCGAGCA+CGG 0.575721 4_4:+80556103 None:intergenic
TCTGTGTCCATTGCTGATAC+GGG 0.582687 4_4:-80556687 Msa0707320:three_prime_UTR
ATCAGGCCATTGTGCAAGAG+TGG 0.583842 4_4:-80550817 Msa0707320:three_prime_UTR
TGAAGGTATATGATACCATA+GGG 0.583986 4_4:-80559746 Msa0707320:intron
GGTTTGACATCCTCTTTCCG+TGG 0.585428 4_4:+80553709 None:intergenic
ACTAGTCCAAAATCTAAGGA+AGG 0.586333 4_4:-80554163 Msa0707320:three_prime_UTR
TCTGATTGATCAGTTTGCAC+GGG 0.587189 4_4:+80552016 None:intergenic
TTGGAAGATGATGATTACAT+AGG 0.587979 4_4:-80551794 Msa0707320:three_prime_UTR
TCGGTCCCGGATGTATTAGG+AGG 0.590138 4_4:+80551269 None:intergenic
TCTGGACTCCTACCATGTGA+AGG 0.590540 4_4:-80551536 Msa0707320:three_prime_UTR
GCAGTTTCTAAAGAAACAGA+TGG 0.591651 4_4:-80556783 Msa0707320:three_prime_UTR
GTTTGACATCCTCTTTCCGT+GGG 0.592195 4_4:+80553710 None:intergenic
TCACAGAGATGCAGTCCAGA+AGG 0.593323 4_4:-80551600 Msa0707320:three_prime_UTR
TGATATGCTGACACTCTCAC+AGG 0.594250 4_4:-80560568 Msa0707320:CDS
TATGGATATGGTTATTGACA+GGG 0.594947 4_4:-80560338 Msa0707320:CDS
AACACCGGTCTCATATCAGT+TGG 0.595062 4_4:+80553189 None:intergenic
GCAAGTTCGTATAAAAGTTG+AGG 0.595408 4_4:-80554511 Msa0707320:three_prime_UTR
GCAAGTTCGTATAAAAGTTG+AGG 0.595408 4_4:-80554640 Msa0707320:three_prime_UTR
GTGACAGTTTGGTGAGCAAG+AGG 0.595565 4_4:+80551619 None:intergenic
GCCAATCTCTGCATTAATGG+TGG 0.596293 4_4:+80551574 None:intergenic
ATTAGTGTCAGCAAGTCCCT+TGG 0.597733 4_4:+80554281 None:intergenic
ATTGGCAGATTCTATAGGGG+TGG 0.597940 4_4:-80550285 Msa0707320:three_prime_UTR
ATTGCCTCCTGAAGTTGATG+GGG 0.598756 4_4:-80556595 Msa0707320:three_prime_UTR
TGTATTGGCAGATTCTATAG+GGG 0.599051 4_4:-80550288 Msa0707320:three_prime_UTR
GACGTTGAAGGGGAAACATG+TGG 0.600689 4_4:-80560367 Msa0707320:CDS
GACGAACCGTAAGCTTTCCA+AGG 0.600753 4_4:-80554298 Msa0707320:three_prime_UTR
TGGGAGGTACTCAAAGTGAA+AGG 0.600800 4_4:-80550352 Msa0707320:three_prime_UTR
TGATGAAACCAATCCAGGCA+CGG 0.601046 4_4:+80560708 None:intergenic
TGTCTCTCCCGTATCAGCAA+TGG 0.601856 4_4:+80556680 None:intergenic
AAGAAGTCAATGTTGCAGAA+AGG 0.602008 4_4:-80553994 Msa0707320:three_prime_UTR
ACAGTACGTGGTTATGCCCA+AGG 0.604432 4_4:-80557842 Msa0707320:intron
ACTAACAGTGAATGTCATGC+CGG 0.606011 4_4:-80556717 Msa0707320:three_prime_UTR
TGGATAGTGCAGACTGTAAG+GGG 0.606342 4_4:-80551670 Msa0707320:three_prime_UTR
AATTAAGCAGTCACTCAGGA+GGG 0.606780 4_4:-80553516 Msa0707320:three_prime_UTR
AACTGATATGAGACCGGTGT+TGG 0.607099 4_4:-80553187 Msa0707320:three_prime_UTR
ATTACAATCATTACATGGAG+AGG 0.607432 4_4:-80551429 Msa0707320:three_prime_UTR
CAACAGCACCTTCACATGGT+AGG 0.607744 4_4:+80551528 None:intergenic
TTACAATCATTACATGGAGA+GGG 0.608719 4_4:-80551428 Msa0707320:three_prime_UTR
TAGAACTGCAGACACAGAGT+TGG 0.609167 4_4:-80552194 Msa0707320:three_prime_UTR
TGGCGACAAGGTGCCAACAC+CGG 0.609390 4_4:+80553174 None:intergenic
TGTACTTCTAGTCGATAATG+TGG 0.609798 4_4:-80556161 Msa0707320:intron
ATCCAGGCACGGAAATTCGA+AGG 0.609827 4_4:+80560719 None:intergenic
TGGTAGAAGAAAGCGTGCAT+GGG 0.610649 4_4:-80553926 Msa0707320:three_prime_UTR
TCTTTGCCTTCAGAGCTGAA+GGG 0.611101 4_4:+80554013 None:intergenic
CAATTAAGCAGTCACTCAGG+AGG 0.619637 4_4:-80553517 Msa0707320:three_prime_UTR
TTGGTTCCATCAAAGCTACT+CGG 0.620668 4_4:+80556390 None:intergenic
CTTTAAATCGCTATGCACGA+AGG 0.621604 4_4:+80556440 None:intergenic
ATTGCCAACTGATATGAGAC+CGG 0.622238 4_4:-80553193 Msa0707320:three_prime_UTR
GTACAATTAAGCAGTCACTC+AGG 0.623035 4_4:-80553520 Msa0707320:three_prime_UTR
GTGCAAGAGTGGTGTGATCA+CGG 0.623081 4_4:-80550806 Msa0707320:three_prime_UTR
TAACCCAAGAAAACTTGTTG+AGG 0.623685 4_4:+80550605 None:intergenic
TCAACGCTATTTGAACTGCA+GGG 0.626482 4_4:+80551966 None:intergenic
TGGTGCCAAAGTTGGCACAA+AGG 0.626604 4_4:-80553473 Msa0707320:three_prime_UTR
GACACAGCTGTACCGCCTGA+CGG 0.626722 4_4:-80552254 Msa0707320:three_prime_UTR
ATTAAGCAGTCACTCAGGAG+GGG 0.627001 4_4:-80553515 Msa0707320:three_prime_UTR
GCAAACCTCCTAATACATCC+GGG 0.627613 4_4:-80551274 Msa0707320:three_prime_UTR
ATGATTGCAGAGATGATGAC+TGG 0.628430 4_4:-80559308 Msa0707320:intron
CAGATGGCAATTCAATAAAG+GGG 0.633431 4_4:-80556767 Msa0707320:three_prime_UTR
AAAAGAAAGAAAACATGACT+GGG 0.634095 4_4:-80554239 Msa0707320:three_prime_UTR
AGTTTATAGAGGATTTGTTG+CGG 0.634669 4_4:+80554124 None:intergenic
TGAGCCATGTAAGTTAATGT+CGG 0.634802 4_4:-80556562 Msa0707320:three_prime_UTR
CAAGACTATTAAAGCAACAG+AGG 0.636817 4_4:-80553623 Msa0707320:three_prime_UTR
CCTTTAGGGCTGCTATAACA+GGG 0.637214 4_4:-80554065 Msa0707320:three_prime_UTR
ACTGTGTCACCGATCATGAA+GGG 0.639740 4_4:-80556504 Msa0707320:three_prime_UTR
AAGTGGGCAGAGATTAGTGA+TGG 0.639850 4_4:+80560028 None:intergenic
GGTGAATTACAATCATTACA+TGG 0.640283 4_4:-80551434 Msa0707320:three_prime_UTR
AGTTTGCACGGGTGATGATG+AGG 0.641447 4_4:+80552027 None:intergenic
TGCACGGGTGATGATGAGGT+TGG 0.643445 4_4:+80552031 None:intergenic
AATGGTGCATTACCTTCCAA+AGG 0.646787 4_4:+80556079 None:intergenic
TGTGTGGGATTTGATACTGA+AGG 0.648912 4_4:-80557873 Msa0707320:three_prime_UTR
GTAATGAAAAGGAAGTGTCA+GGG 0.649835 4_4:-80551883 Msa0707320:three_prime_UTR
ATTCCAGAAACAAGTGAGAG+AGG 0.650251 4_4:-80556621 Msa0707320:three_prime_UTR
ATGGATATGGTTATTGACAG+GGG 0.650966 4_4:-80560337 Msa0707320:CDS
GCTACAGCTTACCTGCCTCA+CGG 0.652429 4_4:+80553134 None:intergenic
GGACCGATGAAAATATTCGA+AGG 0.652969 4_4:-80551253 Msa0707320:three_prime_UTR
GGATCAACAGCACCTTCACA+TGG 0.653448 4_4:+80551524 None:intergenic
ATCACACCACTCTTGCACAA+TGG 0.654773 4_4:+80550811 None:intergenic
TCACGGCTGAACAGTACAGG+TGG 0.655166 4_4:-80550789 Msa0707320:three_prime_UTR
AAGCTTCAGCCGATAGTTCG+GGG 0.655200 4_4:+80554475 None:intergenic
AGATCCCCATCAACTTCAGG+AGG 0.655605 4_4:+80556591 None:intergenic
ACAGGTAGAAGCCTACATCA+AGG 0.658247 4_4:-80550845 Msa0707320:intron
CACGGCTGAACAGTACAGGT+GGG 0.658297 4_4:-80550788 Msa0707320:three_prime_UTR
AGATGGCAATTCAATAAAGG+GGG 0.669533 4_4:-80556766 Msa0707320:three_prime_UTR
AAGTACGTGAAAATCTAACA+AGG 0.671379 4_4:-80553969 Msa0707320:three_prime_UTR
ACGAACCGTAAGCTTTCCAA+GGG 0.671646 4_4:-80554297 Msa0707320:three_prime_UTR
ATTACATGGAGAGGGCAAGA+CGG 0.675282 4_4:-80551420 Msa0707320:three_prime_UTR
AGGAGTCCAGAAGAAACGGA+AGG 0.678183 4_4:+80551548 None:intergenic
AAGCTTCAACCGATAGTTCG+GGG 0.688218 4_4:+80554604 None:intergenic
AAACTACAGAGGCCATGAGG+AGG 0.696612 4_4:+80550311 None:intergenic
TTGTGATGACAGTGCCAGAG+TGG 0.696980 4_4:-80555895 Msa0707320:three_prime_UTR
TGAGAAAGTAAAGAAACTCG+CGG 0.702852 4_4:-80550689 Msa0707320:three_prime_UTR
ACAAAACTACAGAGGCCATG+AGG 0.703929 4_4:+80550308 None:intergenic
ATAAAATTCCTGTATCCGTG+AGG 0.706166 4_4:-80553149 Msa0707320:three_prime_UTR
AATGTTTAGAGCTAATGACT+CGG 0.708135 4_4:-80554550 Msa0707320:three_prime_UTR
AAGGTACATCTGACAGTACG+TGG 0.709384 4_4:-80557854 Msa0707320:three_prime_UTR
AATGTTTAGAGCTAATGACT+CGG 0.710307 4_4:-80554421 Msa0707320:three_prime_UTR
GCATATTTAGCTAAAATGGG+AGG 0.715779 4_4:-80550368 Msa0707320:three_prime_UTR
CTGCCAATACAAAACTACAG+AGG 0.729813 4_4:+80550300 None:intergenic
AAAGTAGATAAGATTGTACG+TGG 0.730669 4_4:-80553556 Msa0707320:three_prime_UTR
GAAAACAATGAAGTGCCAGG+AGG 0.758156 4_4:-80551644 Msa0707320:three_prime_UTR
TGATACGGGAGAGACAGCTG+TGG 0.814386 4_4:-80556673 Msa0707320:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATGAATATGATATTTTT+TGG - chr4_4:80550788-80550807 Msa0707320:three_prime_UTR 10.0%
!! TATATATTATTGTATATAAC+CGG + chr4_4:80553679-80553698 None:intergenic 10.0%
!!! ATTTTATTAATGACATTATA+AGG + chr4_4:80554946-80554965 None:intergenic 10.0%
!! TTTCATAACAATAAAATAAA+TGG - chr4_4:80555211-80555230 Msa0707320:intron 10.0%
!! TAAAATAAAGTATGATTAAT+TGG + chr4_4:80555653-80555672 None:intergenic 10.0%
!!! AATTAATCATACTTTATTTT+AGG - chr4_4:80555652-80555671 Msa0707320:intron 10.0%
!! ATATAATGAATATAGTTAAA+GGG - chr4_4:80556571-80556590 Msa0707320:three_prime_UTR 10.0%
!! TTGTAAATACTATTGAAATT+GGG - chr4_4:80551091-80551110 Msa0707320:intron 15.0%
!!! ATTGTTTTAGTATATTTACA+TGG - chr4_4:80551994-80552013 Msa0707320:three_prime_UTR 15.0%
!! ATAATACAAATAACTGTTTA+GGG + chr4_4:80552122-80552141 None:intergenic 15.0%
!! AATAATACAAATAACTGTTT+AGG + chr4_4:80552123-80552142 None:intergenic 15.0%
!!! GTTATACATTAATTTTGAAA+AGG + chr4_4:80552317-80552336 None:intergenic 15.0%
!! AATTTATTGCTTTATATCTA+TGG - chr4_4:80552558-80552577 Msa0707320:intron 15.0%
!! CATTTGTATTATTTACTATT+TGG - chr4_4:80553282-80553301 Msa0707320:intron 15.0%
!!! ATTTTGCTTATATTTTGATA+CGG + chr4_4:80553888-80553907 None:intergenic 15.0%
!!! TTTTAAATGAAATTAACAAG+AGG + chr4_4:80553954-80553973 None:intergenic 15.0%
!!! ATTTTGCTTTCTTTATTTTT+AGG - chr4_4:80554851-80554870 Msa0707320:intron 15.0%
!!! AATCTAATATCTTTTTAAGA+TGG - chr4_4:80555065-80555084 Msa0707320:intron 15.0%
!! TTAAAAGTTAACTTATCAAT+TGG - chr4_4:80555282-80555301 Msa0707320:intron 15.0%
!!! CTAATTTTTTTTATTCTAGA+CGG - chr4_4:80555506-80555525 Msa0707320:intron 15.0%
!!! ATGATATTTTATGCTAATAA+CGG + chr4_4:80555918-80555937 None:intergenic 15.0%
!! AAATTTATTTCAACGAAATA+TGG + chr4_4:80556147-80556166 None:intergenic 15.0%
!! TGTAATATCAAGTAAAAAAT+TGG + chr4_4:80556224-80556243 None:intergenic 15.0%
!! GATATAATGAATATAGTTAA+AGG - chr4_4:80556570-80556589 Msa0707320:three_prime_UTR 15.0%
!!! AATTTTAGAGTATTATAACA+TGG + chr4_4:80558148-80558167 None:intergenic 15.0%
!! TCTTTACAAAAATTTGAAAA+TGG - chr4_4:80559855-80559874 Msa0707320:intron 15.0%
!! CTTTACAAAAATTTGAAAAT+GGG - chr4_4:80559856-80559875 Msa0707320:intron 15.0%
!! ATTAAAAGTAAAATAGACAA+TGG - chr4_4:80559905-80559924 Msa0707320:intron 15.0%
!!! TTTTTTTTTGTTGCTTGTTT+TGG - chr4_4:80550142-80550161 Msa0707320:three_prime_UTR 20.0%
!!! TTTTTTTTGTTGCTTGTTTT+GGG - chr4_4:80550143-80550162 Msa0707320:three_prime_UTR 20.0%
!!! TGAATATGATATTTTTTGGA+TGG - chr4_4:80550792-80550811 Msa0707320:three_prime_UTR 20.0%
!! TGAAGAGTTATATTAAATGA+AGG + chr4_4:80550963-80550982 None:intergenic 20.0%
!! TTCATTTAATATAACTCTTC+AGG - chr4_4:80550962-80550981 Msa0707320:intron 20.0%
!! CAAAACAGAATAAATAACAT+GGG + chr4_4:80551003-80551022 None:intergenic 20.0%
!! CTTGTAAATACTATTGAAAT+TGG - chr4_4:80551090-80551109 Msa0707320:intron 20.0%
!! AGATTAGATAGAACATTATA+TGG + chr4_4:80551419-80551438 None:intergenic 20.0%
!! TAATACAAATAACTGTTTAG+GGG + chr4_4:80552121-80552140 None:intergenic 20.0%
!! TTATTATGAACTTATGATCA+AGG + chr4_4:80552665-80552684 None:intergenic 20.0%
!! AATAAACAAACACTAATAGA+TGG - chr4_4:80552680-80552699 Msa0707320:intron 20.0%
!!! TGTTTTTTTACCAACTTTTA+TGG - chr4_4:80552897-80552916 Msa0707320:intron 20.0%
!!! GTTTTTTTACCAACTTTTAT+GGG - chr4_4:80552898-80552917 Msa0707320:intron 20.0%
!! CCTTATGATAATTTCATTAA+CGG + chr4_4:80552936-80552955 None:intergenic 20.0%
!! ACAACATTTATATCATAAAC+CGG - chr4_4:80553200-80553219 Msa0707320:three_prime_UTR 20.0%
!! ATATATGCATGTTAACAAAT+AGG + chr4_4:80553353-80553372 None:intergenic 20.0%
!!! TCTAAGTTTTTTATTCAGTA+TGG - chr4_4:80553441-80553460 Msa0707320:three_prime_UTR 20.0%
!!! CTAAGTTTTTTATTCAGTAT+GGG - chr4_4:80553442-80553461 Msa0707320:three_prime_UTR 20.0%
!! GTCTCTTATATAAAAAAATC+CGG - chr4_4:80553657-80553676 Msa0707320:three_prime_UTR 20.0%
!! ACAAGAAACTATTTAATATG+TGG - chr4_4:80553713-80553732 Msa0707320:three_prime_UTR 20.0%
!!! TTTTGCTTATATTTTGATAC+GGG + chr4_4:80553887-80553906 None:intergenic 20.0%
!!! TTTTAAGCAATTAAATGAGA+TGG + chr4_4:80554004-80554023 None:intergenic 20.0%
!! GTCATTAATAAAATGTTCTT+AGG - chr4_4:80554952-80554971 Msa0707320:intron 20.0%
!!! AATTTTATTACATGAGAAGT+AGG - chr4_4:80555158-80555177 Msa0707320:intron 20.0%
!!! ATTTTATTACATGAGAAGTA+GGG - chr4_4:80555159-80555178 Msa0707320:intron 20.0%
!!! CGTCTAGAATAAAAAAAATT+AGG + chr4_4:80555508-80555527 None:intergenic 20.0%
!! AATAAAGTATGATTAATTGG+AGG + chr4_4:80555650-80555669 None:intergenic 20.0%
!! GAATAATATATACATTTCTG+TGG + chr4_4:80555810-80555829 None:intergenic 20.0%
!! TAAACCCAATTCTTATATAT+AGG - chr4_4:80555846-80555865 Msa0707320:intron 20.0%
!! AAACCCAATTCTTATATATA+GGG - chr4_4:80555847-80555866 Msa0707320:intron 20.0%
!! TTTCGTTGAAATAAATTTGT+TGG - chr4_4:80556149-80556168 Msa0707320:three_prime_UTR 20.0%
!! AATATCAAGTAAAAAATTGG+AGG + chr4_4:80556221-80556240 None:intergenic 20.0%
!!! TTATTTACAAGTTCAGTTTT+AGG + chr4_4:80556852-80556871 None:intergenic 20.0%
!!! AATCTAACAAGGAAAATTTT+TGG - chr4_4:80556933-80556952 Msa0707320:intron 20.0%
!!! ATCTAACAAGGAAAATTTTT+GGG - chr4_4:80556934-80556953 Msa0707320:intron 20.0%
!! AATATAAAATCACCCTAATT+TGG - chr4_4:80558058-80558077 Msa0707320:intron 20.0%
!! ATATAAAATCACCCTAATTT+GGG - chr4_4:80558059-80558078 Msa0707320:intron 20.0%
!!! AAACTAATACTCTTTTTATG+AGG + chr4_4:80558510-80558529 None:intergenic 20.0%
!! AGATGCTATTAATATTGAAA+AGG - chr4_4:80558727-80558746 Msa0707320:intron 20.0%
!! CAATGAAATATGTAATGAAA+AGG - chr4_4:80558997-80559016 Msa0707320:intron 20.0%
!! TCAGAATTTGAAGATTTATA+CGG - chr4_4:80559397-80559416 Msa0707320:intron 20.0%
!!! TCAACTTTTTCTATTTTGTT+GGG + chr4_4:80560246-80560265 None:intergenic 20.0%
!!! ATCAACTTTTTCTATTTTGT+TGG + chr4_4:80560247-80560266 None:intergenic 20.0%
!!! ATCTTTTTTGTTTATCTTCT+TGG + chr4_4:80560725-80560744 None:intergenic 20.0%
!! TGAATCACAATATACGATTT+TGG - chr4_4:80550228-80550247 Msa0707320:three_prime_UTR 25.0%
! TAATTCGTAACAGGATAATT+TGG - chr4_4:80550502-80550521 Msa0707320:three_prime_UTR 25.0%
! TTGGAAGATTGAATAAAAAG+GGG + chr4_4:80550624-80550643 None:intergenic 25.0%
! GTTGGAAGATTGAATAAAAA+GGG + chr4_4:80550625-80550644 None:intergenic 25.0%
! CCAAAACAGAATAAATAACA+TGG + chr4_4:80551004-80551023 None:intergenic 25.0%
!!! CCATGTTATTTATTCTGTTT+TGG - chr4_4:80551001-80551020 Msa0707320:intron 25.0%
!!! TGCTGTTTTGATTACTATTA+TGG - chr4_4:80551035-80551054 Msa0707320:intron 25.0%
! CTTTCATACAAACAAAATGA+CGG + chr4_4:80551211-80551230 None:intergenic 25.0%
!! TTTTCATCAATGTAGTAAGA+GGG + chr4_4:80551642-80551661 None:intergenic 25.0%
!! ATTTTCATCAATGTAGTAAG+AGG + chr4_4:80551643-80551662 None:intergenic 25.0%
!!! AACTTTAGAATACTAGTACT+AGG - chr4_4:80551688-80551707 Msa0707320:three_prime_UTR 25.0%
! AACACATGTCATAATTGATA+TGG - chr4_4:80551949-80551968 Msa0707320:three_prime_UTR 25.0%
! TAGTATATTTACATGGTAAG+AGG - chr4_4:80552001-80552020 Msa0707320:three_prime_UTR 25.0%
! AGTAACTGAGTTAAAGAATT+AGG + chr4_4:80552207-80552226 None:intergenic 25.0%
!!! AATATGTCTTTGAGTTGATT+GGG - chr4_4:80552532-80552551 Msa0707320:intron 25.0%
! CCGTTAATGAAATTATCATA+AGG - chr4_4:80552933-80552952 Msa0707320:intron 25.0%
!!! GATCGATTAAATTTTTTTGC+AGG + chr4_4:80553176-80553195 None:intergenic 25.0%
! ACATTGTTACTCTTTATTAC+CGG + chr4_4:80553222-80553241 None:intergenic 25.0%
! CATGCATATATAGTTCATAT+TGG - chr4_4:80553362-80553381 Msa0707320:three_prime_UTR 25.0%
!!! TTTGCTTATATTTTGATACG+GGG + chr4_4:80553886-80553905 None:intergenic 25.0%
! CAAAACAAGATACAATATAC+AGG + chr4_4:80554041-80554060 None:intergenic 25.0%
! GTCCTATAACTATTCTAATT+CGG - chr4_4:80554060-80554079 Msa0707320:three_prime_UTR 25.0%
! TCCTATAACTATTCTAATTC+GGG - chr4_4:80554061-80554080 Msa0707320:three_prime_UTR 25.0%
! ATTCACTGTTAGTATTATCT+GGG + chr4_4:80554167-80554186 None:intergenic 25.0%
! GATTTAAAGGAAAGTGATAA+TGG - chr4_4:80554465-80554484 Msa0707320:three_prime_UTR 25.0%
!! ATATCAGATTCAATTTTGCA+TGG + chr4_4:80554558-80554577 None:intergenic 25.0%
! ATGCAAAATTGAATCTGATA+TGG - chr4_4:80554557-80554576 Msa0707320:three_prime_UTR 25.0%
! TGCAAAATTGAATCTGATAT+GGG - chr4_4:80554558-80554577 Msa0707320:three_prime_UTR 25.0%
!!! TGTTTTAGAAGCTAACAAAA+AGG + chr4_4:80554644-80554663 None:intergenic 25.0%
!! TAAGTTAACTTTTAAGCCTT+TGG + chr4_4:80555277-80555296 None:intergenic 25.0%
! GTAATAACCTTCAATAAATG+AGG + chr4_4:80555377-80555396 None:intergenic 25.0%
! TAAGCTTATTGCATTCATAT+AGG + chr4_4:80555459-80555478 None:intergenic 25.0%
!!! TTTTTTTTATTCTAGACGGA+AGG - chr4_4:80555510-80555529 Msa0707320:intron 25.0%
!! GTTAATTAAGAGTTGATTGT+GGG + chr4_4:80555597-80555616 None:intergenic 25.0%
!! TGTTAATTAAGAGTTGATTG+TGG + chr4_4:80555598-80555617 None:intergenic 25.0%
! ACAATCAACTCTTAATTAAC+AGG - chr4_4:80555597-80555616 Msa0707320:intron 25.0%
!! ATGGAAAATCTTTTGGATTA+AGG + chr4_4:80555689-80555708 None:intergenic 25.0%
!! AAGTACTATGGAAAATCTTT+TGG + chr4_4:80555696-80555715 None:intergenic 25.0%
!! TATTGGTAACTGTTAAGAAT+AGG + chr4_4:80555719-80555738 None:intergenic 25.0%
!! AAACTGGAATTAGTTGATAT+TGG + chr4_4:80555736-80555755 None:intergenic 25.0%
! AACCCAATTCTTATATATAG+GGG - chr4_4:80555848-80555867 Msa0707320:intron 25.0%
!!! GTTGGAGAATGTTTTAAAAT+GGG + chr4_4:80556531-80556550 None:intergenic 25.0%
!!! TGTTGGAGAATGTTTTAAAA+TGG + chr4_4:80556532-80556551 None:intergenic 25.0%
!! TTTAAAACATTCTCCAACAA+AGG - chr4_4:80556533-80556552 Msa0707320:three_prime_UTR 25.0%
! AAAAGAAAGAAAACATGACT+GGG - chr4_4:80556652-80556671 Msa0707320:three_prime_UTR 25.0%
!! TAATTTCCTTCCTTAGATTT+TGG + chr4_4:80556737-80556756 None:intergenic 25.0%
!! CGAGAAGATTTTTATCAAAA+TGG + chr4_4:80556803-80556822 None:intergenic 25.0%
! ATATACAATCTGGAAAGAAT+TGG + chr4_4:80557143-80557162 None:intergenic 25.0%
! TTTCTCAGATAAACAAACTT+TGG + chr4_4:80557315-80557334 None:intergenic 25.0%
! TGAAAGGTGATAAAAGAAAA+TGG - chr4_4:80557465-80557484 Msa0707320:intron 25.0%
! GAAAGGTGATAAAAGAAAAT+GGG - chr4_4:80557466-80557485 Msa0707320:intron 25.0%
!!! TGTTTTATTACCTTTGTTGT+TGG - chr4_4:80557625-80557644 Msa0707320:intron 25.0%
!!! TTTGCAACAAAAAAAGTGTT+TGG + chr4_4:80557852-80557871 None:intergenic 25.0%
!!! TTTTTGAGTTACCCAAATTA+GGG + chr4_4:80558073-80558092 None:intergenic 25.0%
!!! TTTTTTGAGTTACCCAAATT+AGG + chr4_4:80558074-80558093 None:intergenic 25.0%
! GGTAACTCAAAAAATGTATT+GGG - chr4_4:80558080-80558099 Msa0707320:intron 25.0%
! GTAACTCAAAAAATGTATTG+GGG - chr4_4:80558081-80558100 Msa0707320:intron 25.0%
! TAACTCAAAAAATGTATTGG+GGG - chr4_4:80558082-80558101 Msa0707320:intron 25.0%
! TGCTATTAATATTGAAAAGG+AGG - chr4_4:80558730-80558749 Msa0707320:intron 25.0%
! ACATATTTCATTGTTCTTGT+GGG + chr4_4:80558990-80559009 None:intergenic 25.0%
! TACATATTTCATTGTTCTTG+TGG + chr4_4:80558991-80559010 None:intergenic 25.0%
! GAAGAAAACAAATAATGCTT+TGG - chr4_4:80559201-80559220 Msa0707320:intron 25.0%
! TTATAAGTGGTTCTTTATCA+GGG + chr4_4:80559423-80559442 None:intergenic 25.0%
! TTTATAAGTGGTTCTTTATC+AGG + chr4_4:80559424-80559443 None:intergenic 25.0%
!!! TCTGGAAACTTTTTTATAAG+TGG + chr4_4:80559436-80559455 None:intergenic 25.0%
! CTTATAAAAAAGTTTCCAGA+TGG - chr4_4:80559436-80559455 Msa0707320:intron 25.0%
!!! ATTTTCATTGTTTGACTTCT+GGG + chr4_4:80559689-80559708 None:intergenic 25.0%
!! AGAAGGTATATTGGATAATT+AGG - chr4_4:80559719-80559738 Msa0707320:three_prime_UTR 25.0%
! TTGGATAATTAGGATATGTT+TGG - chr4_4:80559729-80559748 Msa0707320:three_prime_UTR 25.0%
! AAAAAGACCAGTACTATTTA+AGG + chr4_4:80560022-80560041 None:intergenic 25.0%
! TGTGCATATTTAGCTAAAAT+GGG - chr4_4:80560520-80560539 Msa0707320:intron 25.0%
! ACAAAAAAGATGAATTGCAA+TGG - chr4_4:80560734-80560753 Msa0707320:five_prime_UTR 25.0%
! CAAAAAAGATGAATTGCAAT+GGG - chr4_4:80560735-80560754 Msa0707320:five_prime_UTR 25.0%
TTCAATTTGTGAAACTGGAA+GGG + chr4_4:80550212-80550231 None:intergenic 30.0%
ATTCAATTTGTGAAACTGGA+AGG + chr4_4:80550213-80550232 None:intergenic 30.0%
TGTGATTCAATTTGTGAAAC+TGG + chr4_4:80550217-80550236 None:intergenic 30.0%
CAAAAACGGCAAAGTAATTT+AGG + chr4_4:80550256-80550275 None:intergenic 30.0%
!!! CTAAATTACTTTGCCGTTTT+TGG - chr4_4:80550254-80550273 Msa0707320:three_prime_UTR 30.0%
CCATAAACAGCAATGAATAA+GGG + chr4_4:80550432-80550451 None:intergenic 30.0%
ATGTGGAATATGTATGGATA+TGG - chr4_4:80550541-80550560 Msa0707320:three_prime_UTR 30.0%
TATGGATATGGTTATTGACA+GGG - chr4_4:80550553-80550572 Msa0707320:three_prime_UTR 30.0%
TGGAAGATTGAATAAAAAGG+GGG + chr4_4:80550623-80550642 None:intergenic 30.0%
GGTTGGAAGATTGAATAAAA+AGG + chr4_4:80550626-80550645 None:intergenic 30.0%
ATCTAATTGTGTCAATATGC+TGG - chr4_4:80550690-80550709 Msa0707320:three_prime_UTR 30.0%
! CTTTGTATGTATTGACAACT+GGG - chr4_4:80550837-80550856 Msa0707320:three_prime_UTR 30.0%
CAGTGAGTCATATAAATTTG+CGG - chr4_4:80550920-80550939 Msa0707320:intron 30.0%
AATCAAAACAGCAAAATGCA+TGG + chr4_4:80551028-80551047 None:intergenic 30.0%
TACTATTGAAATTGGGTGTA+TGG - chr4_4:80551098-80551117 Msa0707320:intron 30.0%
TATCAAACTCATAACTGTGA+AGG - chr4_4:80551128-80551147 Msa0707320:intron 30.0%
! TGAAGGTATATGATACCATA+GGG - chr4_4:80551145-80551164 Msa0707320:intron 30.0%
TTATCCTCATATATCACACT+TGG - chr4_4:80551254-80551273 Msa0707320:three_prime_UTR 30.0%
AATACCAAGTGTGATATATG+AGG + chr4_4:80551261-80551280 None:intergenic 30.0%
CATGAAGGAAAAAGGTTAAA+AGG + chr4_4:80551566-80551585 None:intergenic 30.0%
ATTTACATGGTAAGAGGTAA+TGG - chr4_4:80552007-80552026 Msa0707320:three_prime_UTR 30.0%
ATTAGGAAAATAGTTGCTTG+TGG + chr4_4:80552190-80552209 None:intergenic 30.0%
!! TTTGTTATTTAAAAGCGTCG+AGG + chr4_4:80552247-80552266 None:intergenic 30.0%
AATGTATAACACTAATCCCT+TGG - chr4_4:80552327-80552346 Msa0707320:intron 30.0%
ACAAAATGATGAAATGCCAA+GGG + chr4_4:80552346-80552365 None:intergenic 30.0%
TACAAAATGATGAAATGCCA+AGG + chr4_4:80552347-80552366 None:intergenic 30.0%
! TTGGCATTTCATCATTTTGT+AGG - chr4_4:80552346-80552365 Msa0707320:intron 30.0%
!! CAATATGTCTTTGAGTTGAT+TGG - chr4_4:80552531-80552550 Msa0707320:intron 30.0%
CAAAACAAAATTCTGCCAAA+TGG + chr4_4:80552609-80552628 None:intergenic 30.0%
ACTGTGTAATTAGAATGAGT+TGG + chr4_4:80552819-80552838 None:intergenic 30.0%
GATTACAATTGTAAGAGAGA+TGG - chr4_4:80552840-80552859 Msa0707320:intron 30.0%
TGACAAATTCAACTTACCTT+GGG + chr4_4:80553068-80553087 None:intergenic 30.0%
ATGTTTGTGCAAAACTTCAA+CGG + chr4_4:80553140-80553159 None:intergenic 30.0%
ATGTTAACAAATAGGACAAG+TGG + chr4_4:80553345-80553364 None:intergenic 30.0%
TTATTCAGTATGGGTTTCTA+AGG - chr4_4:80553451-80553470 Msa0707320:three_prime_UTR 30.0%
TATTCAGTATGGGTTTCTAA+GGG - chr4_4:80553452-80553471 Msa0707320:three_prime_UTR 30.0%
GTGGTTAACAATCAAAAGAA+AGG - chr4_4:80553732-80553751 Msa0707320:three_prime_UTR 30.0%
AGGTGACAATAATAAGATAC+AGG + chr4_4:80553807-80553826 None:intergenic 30.0%
AATCAAAAGGAAGTTTACCT+GGG + chr4_4:80553838-80553857 None:intergenic 30.0%
ATGCTCATGTTTCAATCAAA+AGG + chr4_4:80553851-80553870 None:intergenic 30.0%
CCTATAACTATTCTAATTCG+GGG - chr4_4:80554062-80554081 Msa0707320:three_prime_UTR 30.0%
AACAGATGGCAATTCAATAA+AGG - chr4_4:80554122-80554141 Msa0707320:three_prime_UTR 30.0%
ACAGATGGCAATTCAATAAA+GGG - chr4_4:80554123-80554142 Msa0707320:three_prime_UTR 30.0%
ATTATCTGGGTTAAATTCCA+GGG + chr4_4:80554154-80554173 None:intergenic 30.0%
TATTATCTGGGTTAAATTCC+AGG + chr4_4:80554155-80554174 None:intergenic 30.0%
CATTCACTGTTAGTATTATC+TGG + chr4_4:80554168-80554187 None:intergenic 30.0%
!! TTTCTGGAATCCATTTGTTT+CGG + chr4_4:80554260-80554279 None:intergenic 30.0%
ATTGGACTCATCAAATAACT+TGG + chr4_4:80554523-80554542 None:intergenic 30.0%
!!! AATTTTGCATGGACTAGTTT+TGG + chr4_4:80554547-80554566 None:intergenic 30.0%
ATGAACCATATTTCTCAGAA+TGG + chr4_4:80554833-80554852 None:intergenic 30.0%
GATTATAGTCTCTGTAAAAG+TGG + chr4_4:80555189-80555208 None:intergenic 30.0%
! TTGAAACTGCAGAATTTTGA+GGG - chr4_4:80555234-80555253 Msa0707320:intron 30.0%
TCAGAAACAAAAATGAAGGT+GGG + chr4_4:80555330-80555349 None:intergenic 30.0%
ATCAGAAACAAAAATGAAGG+TGG + chr4_4:80555331-80555350 None:intergenic 30.0%
CCTATCAGAAACAAAAATGA+AGG + chr4_4:80555334-80555353 None:intergenic 30.0%
!!! CCTTCATTTTTGTTTCTGAT+AGG - chr4_4:80555331-80555350 Msa0707320:intron 30.0%
TAACCTTCAATAAATGAGGA+GGG + chr4_4:80555373-80555392 None:intergenic 30.0%
ATAACCTTCAATAAATGAGG+AGG + chr4_4:80555374-80555393 None:intergenic 30.0%
TGCAATAAGCTTATAGTTTG+AGG - chr4_4:80555466-80555485 Msa0707320:intron 30.0%
! CAAAAAAAGAGTTGATTGCA+GGG + chr4_4:80555568-80555587 None:intergenic 30.0%
! TCAAAAAAAGAGTTGATTGC+AGG + chr4_4:80555569-80555588 None:intergenic 30.0%
!! GTTAAGAATAGGAAGTACTA+TGG + chr4_4:80555708-80555727 None:intergenic 30.0%
!! ACTTGGATCTGTTTATTTTC+TGG - chr4_4:80555765-80555784 Msa0707320:intron 30.0%
AGCCCCTATATATAAGAATT+GGG + chr4_4:80555853-80555872 None:intergenic 30.0%
AAGCCCCTATATATAAGAAT+TGG + chr4_4:80555854-80555873 None:intergenic 30.0%
CAAGTAAAAAATTGGAGGAA+TGG + chr4_4:80556216-80556235 None:intergenic 30.0%
! AATGTTTAGAGCTAATGACT+CGG - chr4_4:80556341-80556360 Msa0707320:three_prime_UTR 30.0%
! AATGTTTAGAGCTAATGACT+CGG - chr4_4:80556341-80556360 Msa0707320:three_prime_UTR 30.0%
GAAAAGAAAGAAAACATGAC+TGG - chr4_4:80556651-80556670 Msa0707320:three_prime_UTR 30.0%
!! AGTTTATAGAGGATTTGTTG+CGG + chr4_4:80556770-80556789 None:intergenic 30.0%
CAAATCCTCTATAAACTTTG+AGG - chr4_4:80556773-80556792 Msa0707320:three_prime_UTR 30.0%
! GTTTTCCTCAAAGTTTATAG+AGG + chr4_4:80556781-80556800 None:intergenic 30.0%
AAGTACGTGAAAATCTAACA+AGG - chr4_4:80556922-80556941 Msa0707320:intron 30.0%
!!! AAAATTTTTGGGACATCCAA+TGG - chr4_4:80556945-80556964 Msa0707320:intron 30.0%
!! TTTAAAGTTTCGACCTTTTC+AGG + chr4_4:80557044-80557063 None:intergenic 30.0%
TGTATCTGCTATATACAATC+TGG + chr4_4:80557153-80557172 None:intergenic 30.0%
TTGTCATCAACAGATTGATT+TGG + chr4_4:80557251-80557270 None:intergenic 30.0%
AAAGTAGATAAGATTGTACG+TGG - chr4_4:80557335-80557354 Msa0707320:intron 30.0%
CTTTCACAGAATCAGATTTA+AGG + chr4_4:80557451-80557470 None:intergenic 30.0%
CTTAAATCTGATTCTGTGAA+AGG - chr4_4:80557449-80557468 Msa0707320:intron 30.0%
! GAAGACGATGCAATTTTTAA+GGG - chr4_4:80557551-80557570 Msa0707320:intron 30.0%
GATAAATTACGTACAAGCAA+AGG + chr4_4:80557584-80557603 None:intergenic 30.0%
!!! TTTTTTTCTCGATTGTGAGT+AGG - chr4_4:80557671-80557690 Msa0707320:intron 30.0%
CTATAACACATGTAACTTGA+TGG + chr4_4:80557800-80557819 None:intergenic 30.0%
CAAGTTACATGTGTTATAGT+TGG - chr4_4:80557801-80557820 Msa0707320:intron 30.0%
! ATGTCTAACTTCTATCCTTT+TGG - chr4_4:80557874-80557893 Msa0707320:three_prime_UTR 30.0%
GGGTAACTCAAAAAATGTAT+TGG - chr4_4:80558079-80558098 Msa0707320:intron 30.0%
! AATGTATTGGGGGATAATTT+TGG - chr4_4:80558092-80558111 Msa0707320:intron 30.0%
AGAACTAAAAGTAAAAGCCA+AGG + chr4_4:80558380-80558399 None:intergenic 30.0%
!! TTTCCTTTTCTAGAGAGTAT+AGG - chr4_4:80558535-80558554 Msa0707320:intron 30.0%
TTCTTAAGAGAGCAGAAATA+CGG + chr4_4:80558592-80558611 None:intergenic 30.0%
CATATTTCATTGTTCTTGTG+GGG + chr4_4:80558989-80559008 None:intergenic 30.0%
! TCTAGTTCAAGTATATCATC+AGG + chr4_4:80559034-80559053 None:intergenic 30.0%
!! TGGTGATTTTGAGTATGATT+TGG - chr4_4:80559078-80559097 Msa0707320:intron 30.0%
TTGGAAGATGATGATTACAT+AGG - chr4_4:80559097-80559116 Msa0707320:intron 30.0%
TCTTCAAATTCTGAATCAAC+TGG + chr4_4:80559391-80559410 None:intergenic 30.0%
AATGATTGTAATTCACCATC+TGG + chr4_4:80559454-80559473 None:intergenic 30.0%
GGTGAATTACAATCATTACA+TGG - chr4_4:80559457-80559476 Msa0707320:intron 30.0%
ATTACAATCATTACATGGAG+AGG - chr4_4:80559462-80559481 Msa0707320:intron 30.0%
TTACAATCATTACATGGAGA+GGG - chr4_4:80559463-80559482 Msa0707320:intron 30.0%
! CTTCCTTCGAATATTTTCAT+CGG + chr4_4:80559644-80559663 None:intergenic 30.0%
!! GATTTTCATTGTTTGACTTC+TGG + chr4_4:80559690-80559709 None:intergenic 30.0%
TGAAAATCAAGTAGTGAAGA+AGG - chr4_4:80559702-80559721 Msa0707320:intron 30.0%
! AAGTAGTGAAGAAGGTATAT+TGG - chr4_4:80559710-80559729 Msa0707320:intron 30.0%
CAGTACTATTTAAGGAAGTA+TGG + chr4_4:80560014-80560033 None:intergenic 30.0%
CATACTTCCTTAAATAGTAC+TGG - chr4_4:80560012-80560031 Msa0707320:CDS 30.0%
GAATGCTAATTTCCTCATAA+AGG - chr4_4:80560175-80560194 Msa0707320:intron 30.0%
!! AAAACTTGTTGAGGATGAAA+TGG + chr4_4:80560280-80560299 None:intergenic 30.0%
! TAGTTGTTCACCTTTTTGTT+AGG - chr4_4:80560313-80560332 Msa0707320:CDS 30.0%
TAGATTTGACACCATGAAAA+TGG - chr4_4:80560393-80560412 Msa0707320:intron 30.0%
TGATTCCGAGAAAGAATATT+CGG - chr4_4:80560440-80560459 Msa0707320:intron 30.0%
CTGTGCATATTTAGCTAAAA+TGG - chr4_4:80560519-80560538 Msa0707320:intron 30.0%
! TTTGTATTGGCAGATTCTAT+AGG - chr4_4:80560601-80560620 Msa0707320:exon 30.0%
! TTGTATTGGCAGATTCTATA+GGG - chr4_4:80560602-80560621 Msa0707320:exon 30.0%
!!! TTGTTGCTTGTTTTGGGTTT+TGG - chr4_4:80550149-80550168 Msa0707320:three_prime_UTR 35.0%
!! CCCTTATTCATTGCTGTTTA+TGG - chr4_4:80550429-80550448 Msa0707320:three_prime_UTR 35.0%
GCCATAAACAGCAATGAATA+AGG + chr4_4:80550433-80550452 None:intergenic 35.0%
AGTGTTGTGTAATTCGTAAC+AGG - chr4_4:80550493-80550512 Msa0707320:three_prime_UTR 35.0%
AGGATAATTTGGACGTTGAA+GGG - chr4_4:80550513-80550532 Msa0707320:three_prime_UTR 35.0%
GGAAACATGTGGAATATGTA+TGG - chr4_4:80550535-80550554 Msa0707320:three_prime_UTR 35.0%
GTATGGATATGGTTATTGAC+AGG - chr4_4:80550552-80550571 Msa0707320:three_prime_UTR 35.0%
ATGGATATGGTTATTGACAG+GGG - chr4_4:80550554-80550573 Msa0707320:three_prime_UTR 35.0%
GAAGATTGAATAAAAAGGGG+GGG + chr4_4:80550621-80550640 None:intergenic 35.0%
GGAAGATTGAATAAAAAGGG+GGG + chr4_4:80550622-80550641 None:intergenic 35.0%
CACAGTGTATATAGTAAGGT+TGG + chr4_4:80550643-80550662 None:intergenic 35.0%
CAACCTTACTATATACACTG+TGG - chr4_4:80550641-80550660 Msa0707320:three_prime_UTR 35.0%
GATCCACAGTGTATATAGTA+AGG + chr4_4:80550647-80550666 None:intergenic 35.0%
GGATGGTTCATTTGTTTCAT+AGG - chr4_4:80550809-80550828 Msa0707320:three_prime_UTR 35.0%
! GCTTTGTATGTATTGACAAC+TGG - chr4_4:80550836-80550855 Msa0707320:three_prime_UTR 35.0%
TGATCAACTGAAACTCATTC+TGG + chr4_4:80550891-80550910 None:intergenic 35.0%
CGCAAATTTATATGACTCAC+TGG + chr4_4:80550922-80550941 None:intergenic 35.0%
! GTGAAGGTATATGATACCAT+AGG - chr4_4:80551144-80551163 Msa0707320:intron 35.0%
TTCAACTTTATTGCTCCCTA+TGG + chr4_4:80551163-80551182 None:intergenic 35.0%
!! ACAGTTTTGTCATGTTTCTG+TGG - chr4_4:80551523-80551542 Msa0707320:three_prime_UTR 35.0%
!! CAGTTTTGTCATGTTTCTGT+GGG - chr4_4:80551524-80551543 Msa0707320:three_prime_UTR 35.0%
!! AGTTTTGTCATGTTTCTGTG+GGG - chr4_4:80551525-80551544 Msa0707320:three_prime_UTR 35.0%
TCTGCAATCATGAAGGAAAA+AGG + chr4_4:80551574-80551593 None:intergenic 35.0%
! TCCAGGATTTCTTGTGTTTT+TGG - chr4_4:80551746-80551765 Msa0707320:three_prime_UTR 35.0%
TCCAAAAACACAAGAAATCC+TGG + chr4_4:80551750-80551769 None:intergenic 35.0%
! ATTGACATGTACCTTTTCGT+TGG - chr4_4:80552159-80552178 Msa0707320:three_prime_UTR 35.0%
! TTGACATGTACCTTTTCGTT+GGG - chr4_4:80552160-80552179 Msa0707320:three_prime_UTR 35.0%
TGATCTATGGTAAGAACAAG+TGG - chr4_4:80552469-80552488 Msa0707320:intron 35.0%
! TAAGAACAAGTGGATGGATT+AGG - chr4_4:80552479-80552498 Msa0707320:intron 35.0%
!! TAGAATGAGTTGGTCATTCA+TGG + chr4_4:80552809-80552828 None:intergenic 35.0%
!! AATTTCATTAACGGATTCCC+TGG + chr4_4:80552927-80552946 None:intergenic 35.0%
AGTATCAAATCCCACACAAA+AGG + chr4_4:80553016-80553035 None:intergenic 35.0%
CTGACAAATTCAACTTACCT+TGG + chr4_4:80553069-80553088 None:intergenic 35.0%
GAATTTGTCAGTTGTTCTGT+CGG - chr4_4:80553078-80553097 Msa0707320:intron 35.0%
AATTTGTCAGTTGTTCTGTC+GGG - chr4_4:80553079-80553098 Msa0707320:intron 35.0%
ACTTCAACGGTCGTTATAAA+AGG + chr4_4:80553127-80553146 None:intergenic 35.0%
GTACAATACACCAAAATGGT+GGG + chr4_4:80553526-80553545 None:intergenic 35.0%
! CTTACCCTGTTTTACACAAA+AGG - chr4_4:80553551-80553570 Msa0707320:three_prime_UTR 35.0%
! ACAGCCTTTTGTGTAAAACA+GGG + chr4_4:80553558-80553577 None:intergenic 35.0%
! AACAGCCTTTTGTGTAAAAC+AGG + chr4_4:80553559-80553578 None:intergenic 35.0%
TATAAGAGACCCATACTGAA+GGG + chr4_4:80553647-80553666 None:intergenic 35.0%
ATATAAGAGACCCATACTGA+AGG + chr4_4:80553648-80553667 None:intergenic 35.0%
! AGTTTACCTGGGAATTTTGT+AGG + chr4_4:80553827-80553846 None:intergenic 35.0%
CAATCAAAAGGAAGTTTACC+TGG + chr4_4:80553839-80553858 None:intergenic 35.0%
TAACGACTTACACACGTATT+AGG - chr4_4:80553908-80553927 Msa0707320:three_prime_UTR 35.0%
CCCCGAATTAGAATAGTTAT+AGG + chr4_4:80554065-80554084 None:intergenic 35.0%
! GCAGTTTCTAAAGAAACAGA+TGG - chr4_4:80554108-80554127 Msa0707320:three_prime_UTR 35.0%
CAGATGGCAATTCAATAAAG+GGG - chr4_4:80554124-80554143 Msa0707320:three_prime_UTR 35.0%
AGATGGCAATTCAATAAAGG+GGG - chr4_4:80554125-80554144 Msa0707320:three_prime_UTR 35.0%
TGAGCCATGTAAGTTAATGT+CGG - chr4_4:80554329-80554348 Msa0707320:three_prime_UTR 35.0%
TAGAAGCTAACAAAAAGGCA+GGG + chr4_4:80554639-80554658 None:intergenic 35.0%
TTAGAAGCTAACAAAAAGGC+AGG + chr4_4:80554640-80554659 None:intergenic 35.0%
TGTACTTCTAGTCGATAATG+TGG - chr4_4:80554730-80554749 Msa0707320:intron 35.0%
! ATGCACCATTCTGAGAAATA+TGG - chr4_4:80554825-80554844 Msa0707320:intron 35.0%
!!! AGAGGAAGCATTTTGATTAC+AGG - chr4_4:80555028-80555047 Msa0707320:intron 35.0%
! GTTGAAACTGCAGAATTTTG+AGG - chr4_4:80555233-80555252 Msa0707320:intron 35.0%
! AACTTTTAAGCCTTTGGACA+GGG + chr4_4:80555271-80555290 None:intergenic 35.0%
! TAACTTTTAAGCCTTTGGAC+AGG + chr4_4:80555272-80555291 None:intergenic 35.0%
AAACAAAAATGAAGGTGGGA+GGG + chr4_4:80555326-80555345 None:intergenic 35.0%
TGATGGAATTATAGACAAGG+GGG + chr4_4:80555418-80555437 None:intergenic 35.0%
! GTGATGGAATTATAGACAAG+GGG + chr4_4:80555419-80555438 None:intergenic 35.0%
! CGTGATGGAATTATAGACAA+GGG + chr4_4:80555420-80555439 None:intergenic 35.0%
CCTTGTCTATAATTCCATCA+CGG - chr4_4:80555418-80555437 Msa0707320:intron 35.0%
TCCAGTTTCTAATCACTACT+TGG - chr4_4:80555748-80555767 Msa0707320:intron 35.0%
TCCAAGTAGTGATTAGAAAC+TGG + chr4_4:80555752-80555771 None:intergenic 35.0%
! GAATTGGGTTTAGAACTCTT+AGG + chr4_4:80555838-80555857 None:intergenic 35.0%
GAATAACCACACACTTCTAA+AGG + chr4_4:80555896-80555915 None:intergenic 35.0%
TATTCACAACTCATGAGACA+AGG - chr4_4:80556017-80556036 Msa0707320:intron 35.0%
ACTGAGTACGAAGAATATCT+AGG + chr4_4:80556058-80556077 None:intergenic 35.0%
! GATCTAAAATGATCGATGCA+AGG + chr4_4:80556117-80556136 None:intergenic 35.0%
GCAAGTTCGTATAAAAGTTG+AGG - chr4_4:80556251-80556270 Msa0707320:intron 35.0%
GCAAGTTCGTATAAAAGTTG+AGG - chr4_4:80556251-80556270 Msa0707320:intron 35.0%
ATGAAGAGAGTTTCTGATGA+TGG - chr4_4:80556693-80556712 Msa0707320:three_prime_UTR 35.0%
ACTAGTCCAAAATCTAAGGA+AGG - chr4_4:80556728-80556747 Msa0707320:three_prime_UTR 35.0%
AAAATCTTCTCGAAGCCTTT+AGG - chr4_4:80556811-80556830 Msa0707320:intron 35.0%
AAATCTTCTCGAAGCCTTTA+GGG - chr4_4:80556812-80556831 Msa0707320:intron 35.0%
AAGAAGTCAATGTTGCAGAA+AGG - chr4_4:80556897-80556916 Msa0707320:intron 35.0%
! GGGATTGTGAAATTGAGTTT+TGG - chr4_4:80556991-80557010 Msa0707320:intron 35.0%
TCTGGAAAGAATTGGATTCT+TGG + chr4_4:80557135-80557154 None:intergenic 35.0%
CAAAATAATCCGTCAGCAAA+AGG - chr4_4:80557224-80557243 Msa0707320:intron 35.0%
CAAGACTATTAAAGCAACAG+AGG - chr4_4:80557268-80557287 Msa0707320:intron 35.0%
CTTAATTGTACTTTACCAGC+TGG + chr4_4:80557362-80557381 None:intergenic 35.0%
TGATAAAAGAAAATGGGCCT+TGG - chr4_4:80557472-80557491 Msa0707320:intron 35.0%
! GGAAGACGATGCAATTTTTA+AGG - chr4_4:80557550-80557569 Msa0707320:intron 35.0%
ATATGTGACACCAACAACAA+AGG + chr4_4:80557638-80557657 None:intergenic 35.0%
TCTCATATCAGTTGGCAATT+GGG + chr4_4:80557697-80557716 None:intergenic 35.0%
! CGGATACAGGAATTTTATTG+TGG + chr4_4:80557740-80557759 None:intergenic 35.0%
ATAAAATTCCTGTATCCGTG+AGG - chr4_4:80557742-80557761 Msa0707320:intron 35.0%
! ATGTAACTTGATGGCAGAAT+TGG + chr4_4:80557791-80557810 None:intergenic 35.0%
! TCTAACTTCTATCCTTTTGG+TGG - chr4_4:80557877-80557896 Msa0707320:three_prime_UTR 35.0%
AGAAAGGGATATCTATCCTA+AGG + chr4_4:80557905-80557924 None:intergenic 35.0%
GAAAAAAAAGGAAGGAGGAA+AGG - chr4_4:80557980-80557999 Msa0707320:intron 35.0%
AGGAAAGGAAGAAGTAAGAA+AGG - chr4_4:80557995-80558014 Msa0707320:intron 35.0%
AAGGAAGAAGTAAGAAAGGA+TGG - chr4_4:80557999-80558018 Msa0707320:intron 35.0%
! TATTGGGGGATAATTTTGGA+GGG - chr4_4:80558096-80558115 Msa0707320:intron 35.0%
TCATCAACTGATACCAACAA+TGG + chr4_4:80558469-80558488 None:intergenic 35.0%
! CTCTTTTTATGAGGAACTTC+AGG + chr4_4:80558501-80558520 None:intergenic 35.0%
! CTACCTATACTCTCTAGAAA+AGG + chr4_4:80558541-80558560 None:intergenic 35.0%
AGTTGTGTCTGTGTTTATGT+TGG + chr4_4:80558837-80558856 None:intergenic 35.0%
TTCTGATTGATCAGTTTGCA+CGG + chr4_4:80558879-80558898 None:intergenic 35.0%
! CAAATAGCGTTGAAAAATGC+TGG - chr4_4:80558935-80558954 Msa0707320:intron 35.0%
!! TGTAATGAAAAGGAAGTGTC+AGG - chr4_4:80559007-80559026 Msa0707320:intron 35.0%
!! GTAATGAAAAGGAAGTGTCA+GGG - chr4_4:80559008-80559027 Msa0707320:intron 35.0%
ATCACCAAAAATATCCAGCT+CGG + chr4_4:80559065-80559084 None:intergenic 35.0%
!!! TCTGCTCTTCTTTTAGGTTA+GGG + chr4_4:80559141-80559160 None:intergenic 35.0%
! ATTCACTCTGCTCTTCTTTT+AGG + chr4_4:80559147-80559166 None:intergenic 35.0%
!! ATTTGTTTTCTTCAAGCTCG+TGG + chr4_4:80559194-80559213 None:intergenic 35.0%
CGAGAATAATGATTGCCATA+AGG - chr4_4:80559504-80559523 Msa0707320:intron 35.0%
GACTTAGACAAAGCAGTAAA+TGG - chr4_4:80559538-80559557 Msa0707320:intron 35.0%
CGATGAAAATATTCGAAGGA+AGG - chr4_4:80559642-80559661 Msa0707320:intron 35.0%
TGAAAATGGGACACAATACA+AGG - chr4_4:80559869-80559888 Msa0707320:intron 35.0%
!!! GTACTGGTCTTTTTTTGTAC+AGG - chr4_4:80560028-80560047 Msa0707320:CDS 35.0%
GCTAATTTCCTCATAAAGGA+AGG - chr4_4:80560179-80560198 Msa0707320:intron 35.0%
TGAGAAAGTAAAGAAACTCG+CGG - chr4_4:80560202-80560221 Msa0707320:intron 35.0%
TGAGGATGAAATGGTGATAT+GGG + chr4_4:80560271-80560290 None:intergenic 35.0%
TTGAGGATGAAATGGTGATA+TGG + chr4_4:80560272-80560291 None:intergenic 35.0%
! TCATCCTCAACAAGTTTTCT+TGG - chr4_4:80560282-80560301 Msa0707320:intron 35.0%
! CATCCTCAACAAGTTTTCTT+GGG - chr4_4:80560283-80560302 Msa0707320:intron 35.0%
!! TAACCCAAGAAAACTTGTTG+AGG + chr4_4:80560289-80560308 None:intergenic 35.0%
GATTCCGAGAAAGAATATTC+GGG - chr4_4:80560441-80560460 Msa0707320:intron 35.0%
CTTTCCCGAATATTCTTTCT+CGG + chr4_4:80560448-80560467 None:intergenic 35.0%
GCATATTTAGCTAAAATGGG+AGG - chr4_4:80560523-80560542 Msa0707320:intron 35.0%
ATCTTATACATTCCTCCTCA+TGG - chr4_4:80560568-80560587 Msa0707320:CDS 35.0%
! TGTATTGGCAGATTCTATAG+GGG - chr4_4:80560603-80560622 Msa0707320:exon 35.0%
AAAGATGAATTGCAATGGGA+AGG - chr4_4:80560739-80560758 Msa0707320:five_prime_UTR 35.0%
!! GGTTTTGATGAAACCAATCC+AGG + chr4_4:80550191-80550210 None:intergenic 40.0%
!! CGCGTTATCGATTCCAAAAA+CGG + chr4_4:80550270-80550289 None:intergenic 40.0%
ATCGATAACGCGATTCTGAA+TGG - chr4_4:80550278-80550297 Msa0707320:three_prime_UTR 40.0%
TTGTCGTTGGCATCATCAAA+TGG + chr4_4:80550351-80550370 None:intergenic 40.0%
AGAGGAAGTTACATTGTCGT+TGG + chr4_4:80550364-80550383 None:intergenic 40.0%
AAGAAAGAGAGAGCGATAAG+AGG + chr4_4:80550382-80550401 None:intergenic 40.0%
CAGGATAATTTGGACGTTGA+AGG - chr4_4:80550512-80550531 Msa0707320:three_prime_UTR 40.0%
GGATAATTTGGACGTTGAAG+GGG - chr4_4:80550514-80550533 Msa0707320:three_prime_UTR 40.0%
CACACTGAAACATGAAGGAA+AGG + chr4_4:80550760-80550779 None:intergenic 40.0%
ACAAGCACACTGAAACATGA+AGG + chr4_4:80550765-80550784 None:intergenic 40.0%
GAAACTCATTCTGGCAAAGT+GGG + chr4_4:80550882-80550901 None:intergenic 40.0%
TGAAACTCATTCTGGCAAAG+TGG + chr4_4:80550883-80550902 None:intergenic 40.0%
GGGAGCAATAAAGTTGAAGA+TGG - chr4_4:80551165-80551184 Msa0707320:intron 40.0%
AAATGACGGTAACTTACCTG+AGG + chr4_4:80551197-80551216 None:intergenic 40.0%
!! GTTTTGTCATGTTTCTGTGG+GGG - chr4_4:80551526-80551545 Msa0707320:three_prime_UTR 40.0%
CATCATCTCTGCAATCATGA+AGG + chr4_4:80551581-80551600 None:intergenic 40.0%
ATGATTGCAGAGATGATGAC+TGG - chr4_4:80551583-80551602 Msa0707320:three_prime_UTR 40.0%
TGATTCAGATTGTTGCAACC+TGG - chr4_4:80551721-80551740 Msa0707320:three_prime_UTR 40.0%
ATAAACTTCCTGCATGACTC+TGG + chr4_4:80551875-80551894 None:intergenic 40.0%
TGAGACTGAACAGGGTTAAA+AGG - chr4_4:80552030-80552049 Msa0707320:three_prime_UTR 40.0%
TTTGTAGGCAGTTACTTGCT+TGG - chr4_4:80552361-80552380 Msa0707320:intron 40.0%
GATGGCTGCAAAATTCGAAA+TGG - chr4_4:80552389-80552408 Msa0707320:intron 40.0%
!! GCAAGTGTTGAAGAAGATTC+TGG - chr4_4:80552416-80552435 Msa0707320:intron 40.0%
CTTGCGATTCATGTGATCTA+TGG - chr4_4:80552456-80552475 Msa0707320:intron 40.0%
CTATGGTAAGAACAAGTGGA+TGG - chr4_4:80552473-80552492 Msa0707320:intron 40.0%
!! ACAAGTGGATGGATTAGGTT+AGG - chr4_4:80552484-80552503 Msa0707320:intron 40.0%
CAGGAATATGATGCAAGTCA+TGG - chr4_4:80552726-80552745 Msa0707320:intron 40.0%
ACCCTGACTTTGTTAAAGTG+TGG - chr4_4:80552783-80552802 Msa0707320:intron 40.0%
GCCACACTTTAACAAAGTCA+GGG + chr4_4:80552787-80552806 None:intergenic 40.0%
CAGGTAAAGCAACAATCAGA+GGG + chr4_4:80552974-80552993 None:intergenic 40.0%
TGCTTTACCTGCAAATTGAC+AGG - chr4_4:80552983-80553002 Msa0707320:intron 40.0%
TGTGTGGGATTTGATACTGA+AGG - chr4_4:80553018-80553037 Msa0707320:intron 40.0%
CGTACAATACACCAAAATGG+TGG + chr4_4:80553527-80553546 None:intergenic 40.0%
CTGCGTACAATACACCAAAA+TGG + chr4_4:80553530-80553549 None:intergenic 40.0%
! TTACACAAAAGGCTGTTTCC+AGG - chr4_4:80553562-80553581 Msa0707320:three_prime_UTR 40.0%
ATAAGAGACCCATACTGAAG+GGG + chr4_4:80553646-80553665 None:intergenic 40.0%
TTGTCACCTACAAAATTCCC+AGG - chr4_4:80553818-80553837 Msa0707320:three_prime_UTR 40.0%
!!! CGGGGTTTATTTTAGATGTG+TGG - chr4_4:80554080-80554099 Msa0707320:three_prime_UTR 40.0%
ACTAACAGTGAATGTCATGC+CGG - chr4_4:80554174-80554193 Msa0707320:three_prime_UTR 40.0%
AATGGACACAGACACTATTC+CGG + chr4_4:80554196-80554215 None:intergenic 40.0%
CAATGGTTGACCGAAACAAA+TGG - chr4_4:80554247-80554266 Msa0707320:three_prime_UTR 40.0%
ATTCCAGAAACAAGTGAGAG+AGG - chr4_4:80554270-80554289 Msa0707320:three_prime_UTR 40.0%
! TATTGCCTCCTGAAGTTGAT+GGG - chr4_4:80554295-80554314 Msa0707320:three_prime_UTR 40.0%
GTGTCCGACATTAACTTACA+TGG + chr4_4:80554336-80554355 None:intergenic 40.0%
AGTTCTTCTCCCTTCATGAT+CGG + chr4_4:80554399-80554418 None:intergenic 40.0%
GCACGAAGGATTTAGAAGTT+GGG + chr4_4:80554440-80554459 None:intergenic 40.0%
TGCACGAAGGATTTAGAAGT+TGG + chr4_4:80554441-80554460 None:intergenic 40.0%
CTTTAAATCGCTATGCACGA+AGG + chr4_4:80554454-80554473 None:intergenic 40.0%
CTTCGTGCATAGCGATTTAA+AGG - chr4_4:80554452-80554471 Msa0707320:three_prime_UTR 40.0%
TTGGTTCCATCAAAGCTACT+CGG + chr4_4:80554504-80554523 None:intergenic 40.0%
TCTGATATGGGTCTTCATCT+TGG - chr4_4:80554570-80554589 Msa0707320:three_prime_UTR 40.0%
GGGTCTTCATCTTGGTTTAT+CGG - chr4_4:80554578-80554597 Msa0707320:three_prime_UTR 40.0%
TCTTCATCTTGGTTTATCGG+TGG - chr4_4:80554581-80554600 Msa0707320:three_prime_UTR 40.0%
CTTCATCTTGGTTTATCGGT+GGG - chr4_4:80554582-80554601 Msa0707320:three_prime_UTR 40.0%
GTGTGCACTCTACAATTATG+AGG - chr4_4:80554684-80554703 Msa0707320:intron 40.0%
GATTCCAGAAGACTTTCCTT+TGG - chr4_4:80554796-80554815 Msa0707320:intron 40.0%
AATGGTGCATTACCTTCCAA+AGG + chr4_4:80554815-80554834 None:intergenic 40.0%
!! TTTTTAGGCCACTCTTAGAC+TGG - chr4_4:80554866-80554885 Msa0707320:intron 40.0%
! TTTTAGGCCACTCTTAGACT+GGG - chr4_4:80554867-80554886 Msa0707320:intron 40.0%
GAATCACGAGTGGATCATAT+TGG - chr4_4:80554889-80554908 Msa0707320:intron 40.0%
CTTAACAGTCACAACGACTA+AGG + chr4_4:80555098-80555117 None:intergenic 40.0%
TAGTCGTTGTGACTGTTAAG+AGG - chr4_4:80555098-80555117 Msa0707320:intron 40.0%
TGTGACTGTTAAGAGGATTG+TGG - chr4_4:80555105-80555124 Msa0707320:intron 40.0%
GTGACTGTTAAGAGGATTGT+GGG - chr4_4:80555106-80555125 Msa0707320:intron 40.0%
AACAAAAATGAAGGTGGGAG+GGG + chr4_4:80555325-80555344 None:intergenic 40.0%
GAAACAAAAATGAAGGTGGG+AGG + chr4_4:80555327-80555346 None:intergenic 40.0%
AATAAATGAGGAGGGCAGAA+AGG + chr4_4:80555365-80555384 None:intergenic 40.0%
! CCGTGATGGAATTATAGACA+AGG + chr4_4:80555421-80555440 None:intergenic 40.0%
! TTTGAGGCACACTTTGCTTT+AGG - chr4_4:80555482-80555501 Msa0707320:intron 40.0%
TATTCTAGACGGAAGGTTCA+AGG - chr4_4:80555517-80555536 Msa0707320:intron 40.0%
CATTACGAAAGTTGTGCTTC+TGG - chr4_4:80555935-80555954 Msa0707320:intron 40.0%
TTGTGCTTCTGGATGGAAAA+TGG - chr4_4:80555946-80555965 Msa0707320:intron 40.0%
TGGATGGAAAATGGCAATAC+AGG - chr4_4:80555955-80555974 Msa0707320:intron 40.0%
! TGAGACAAGGAAAAAAGCAC+TGG - chr4_4:80556030-80556049 Msa0707320:intron 40.0%
TGAAGCTTCAACCGATAGTT+CGG + chr4_4:80556292-80556311 None:intergenic 40.0%
AAGAAAACATGACTGGGTTG+AGG - chr4_4:80556658-80556677 Msa0707320:three_prime_UTR 40.0%
! AGAAAACATGACTGGGTTGA+GGG - chr4_4:80556659-80556678 Msa0707320:three_prime_UTR 40.0%
!!! CCTTAGATTTTGGACTAGTG+AGG + chr4_4:80556727-80556746 None:intergenic 40.0%
CCTCACTAGTCCAAAATCTA+AGG - chr4_4:80556724-80556743 Msa0707320:three_prime_UTR 40.0%
GAGAGCTTCAAAACCTGAAA+AGG - chr4_4:80557028-80557047 Msa0707320:intron 40.0%
! CAGATACATCTGTTTTCCCA+CGG - chr4_4:80557165-80557184 Msa0707320:intron 40.0%
AGAGGATGTCAAACCTTTCT+CGG - chr4_4:80557190-80557209 Msa0707320:intron 40.0%
TGTTTAGTCTGTTCCGAGAA+AGG + chr4_4:80557206-80557225 None:intergenic 40.0%
!!! TGATTTGGTCCTTTTGCTGA+CGG + chr4_4:80557236-80557255 None:intergenic 40.0%
GTACAATTAAGCAGTCACTC+AGG - chr4_4:80557371-80557390 Msa0707320:intron 40.0%
AATTAAGCAGTCACTCAGGA+GGG - chr4_4:80557375-80557394 Msa0707320:intron 40.0%
AGATTCCTTTGTGCCAACTT+TGG + chr4_4:80557426-80557445 None:intergenic 40.0%
AAAGTTGGCACAAAGGAATC+TGG - chr4_4:80557425-80557444 Msa0707320:intron 40.0%
TAAAAGAAAATGGGCCTTGG+AGG - chr4_4:80557475-80557494 Msa0707320:intron 40.0%
GAACACAGCAAATGAAAGTC+AGG - chr4_4:80557529-80557548 Msa0707320:intron 40.0%
GTCTCATATCAGTTGGCAAT+TGG + chr4_4:80557698-80557717 None:intergenic 40.0%
ATTGCCAACTGATATGAGAC+CGG - chr4_4:80557698-80557717 Msa0707320:intron 40.0%
! GGAATTTTATTGTGGCGACA+AGG + chr4_4:80557732-80557751 None:intergenic 40.0%
!! TATCCTTTTGGTGGATCCTT+AGG - chr4_4:80557886-80557905 Msa0707320:three_prime_UTR 40.0%
TATCCTAAGGATCCACCAAA+AGG + chr4_4:80557892-80557911 None:intergenic 40.0%
ACCCTAAATTAGTTCGCAGT+CGG + chr4_4:80557929-80557948 None:intergenic 40.0%
TCCTTGACAGTTTAGAAGGA+GGG - chr4_4:80557948-80557967 Msa0707320:intron 40.0%
CTTGGGAAAAAAAAGGAAGG+AGG - chr4_4:80557975-80557994 Msa0707320:intron 40.0%
! GTATTGGGGGATAATTTTGG+AGG - chr4_4:80558095-80558114 Msa0707320:intron 40.0%
TAAAAGCCAAGGCTCTGTTT+GGG + chr4_4:80558369-80558388 None:intergenic 40.0%
TGGAAAATTCAGTAGCAACC+AGG + chr4_4:80558426-80558445 None:intergenic 40.0%
! GCTACTGAATTTTCCATCGT+TGG - chr4_4:80558430-80558449 Msa0707320:intron 40.0%
CTTAATCCCAGTTCCATTGT+TGG - chr4_4:80558453-80558472 Msa0707320:three_prime_UTR 40.0%
CTGATACCAACAATGGAACT+GGG + chr4_4:80558462-80558481 None:intergenic 40.0%
ACTGATACCAACAATGGAAC+TGG + chr4_4:80558463-80558482 None:intergenic 40.0%
TCTGCAGTTCTACGAATGAT+TGG + chr4_4:80558689-80558708 None:intergenic 40.0%
TCTGATTGATCAGTTTGCAC+GGG + chr4_4:80558878-80558897 None:intergenic 40.0%
TCAACGCTATTTGAACTGCA+GGG + chr4_4:80558928-80558947 None:intergenic 40.0%
TTCAACGCTATTTGAACTGC+AGG + chr4_4:80558929-80558948 None:intergenic 40.0%
TCACCAAAAATATCCAGCTC+GGG + chr4_4:80559064-80559083 None:intergenic 40.0%
GTTAGGGATCTTTGTAACAC+TGG + chr4_4:80559125-80559144 None:intergenic 40.0%
!!! CTCTGCTCTTCTTTTAGGTT+AGG + chr4_4:80559142-80559161 None:intergenic 40.0%
TTTGGATAGTGCAGACTGTA+AGG - chr4_4:80559219-80559238 Msa0707320:intron 40.0%
TTGGATAGTGCAGACTGTAA+GGG - chr4_4:80559220-80559239 Msa0707320:intron 40.0%
! TCTGAAAACAATGAAGTGCC+AGG - chr4_4:80559244-80559263 Msa0707320:intron 40.0%
! CATTAATGGTGGAATCCTTC+TGG + chr4_4:80559309-80559328 None:intergenic 40.0%
TCCACCATTAATGCAGAGAT+TGG - chr4_4:80559316-80559335 Msa0707320:intron 40.0%
! CAGTAAATGGTGCTGAAGTA+GGG - chr4_4:80559551-80559570 Msa0707320:intron 40.0%
!! ATTAGGAGGTTTGCTAGTGA+TGG + chr4_4:80559611-80559630 None:intergenic 40.0%
AGCAAACCTCCTAATACATC+CGG - chr4_4:80559616-80559635 Msa0707320:intron 40.0%
! TCGAATATTTTCATCGGTCC+CGG + chr4_4:80559638-80559657 None:intergenic 40.0%
GGACCGATGAAAATATTCGA+AGG - chr4_4:80559638-80559657 Msa0707320:intron 40.0%
CTTTCTCACCTTCCTTTATG+AGG + chr4_4:80560190-80560209 None:intergenic 40.0%
CAACGTCACACCTAACAAAA+AGG + chr4_4:80560326-80560345 None:intergenic 40.0%
! GCAATGTAGCACCATTTTCA+TGG + chr4_4:80560407-80560426 None:intergenic 40.0%
GTGCTACATTGCGAACAATA+GGG - chr4_4:80560415-80560434 Msa0707320:intron 40.0%
!!! TGGCCTCTGTAGTTTTGTAT+TGG - chr4_4:80560588-80560607 Msa0707320:CDS 40.0%
CTGCCAATACAAAACTACAG+AGG + chr4_4:80560594-80560613 None:intergenic 40.0%
CTTCTTGGTACAGCATACAT+AGG + chr4_4:80560710-80560729 None:intergenic 40.0%
TGATGAAACCAATCCAGGCA+CGG + chr4_4:80550186-80550205 None:intergenic 45.0%
TGATATGCTGACACTCTCAC+AGG - chr4_4:80550323-80550342 Msa0707320:three_prime_UTR 45.0%
! GGTTATTGACAGGGGAGTAT+TGG - chr4_4:80550562-80550581 Msa0707320:three_prime_UTR 45.0%
TATTGGATTGCTGTCAGCAC+TGG - chr4_4:80550579-80550598 Msa0707320:three_prime_UTR 45.0%
AAGTGGGCAGAGATTAGTGA+TGG + chr4_4:80550866-80550885 None:intergenic 45.0%
TTGAAGATGGCTCATTCCTC+AGG - chr4_4:80551178-80551197 Msa0707320:intron 45.0%
CTTATCCCACTAAGTGGTGT+CGG - chr4_4:80551374-80551393 Msa0707320:three_prime_UTR 45.0%
! GATGATGACTGGTCGATTGA+CGG - chr4_4:80551594-80551613 Msa0707320:three_prime_UTR 45.0%
! ATGATGACTGGTCGATTGAC+GGG - chr4_4:80551595-80551614 Msa0707320:three_prime_UTR 45.0%
ATTGTTGCAACCTGGATTCC+AGG - chr4_4:80551729-80551748 Msa0707320:three_prime_UTR 45.0%
CACAAGAAATCCTGGAATCC+AGG + chr4_4:80551742-80551761 None:intergenic 45.0%
! AGGTAATGGTGAGACTGAAC+AGG - chr4_4:80552021-80552040 Msa0707320:three_prime_UTR 45.0%
! GGTAATGGTGAGACTGAACA+GGG - chr4_4:80552022-80552041 Msa0707320:three_prime_UTR 45.0%
! GAACAAAGTCAAGTGCTGCA+AGG + chr4_4:80552273-80552292 None:intergenic 45.0%
TGCAGCACTTGACTTTGTTC+AGG - chr4_4:80552273-80552292 Msa0707320:intron 45.0%
TAGGCAGTTACTTGCTTGGA+TGG - chr4_4:80552365-80552384 Msa0707320:intron 45.0%
GTTACTTGCTTGGATGGTGA+TGG - chr4_4:80552371-80552390 Msa0707320:intron 45.0%
GTTCATCCACAAGAGCCATT+TGG - chr4_4:80552591-80552610 Msa0707320:intron 45.0%
ATTCTGCCAAATGGCTCTTG+TGG + chr4_4:80552600-80552619 None:intergenic 45.0%
GATGGACAGTTACGTCTAGA+AGG - chr4_4:80552698-80552717 Msa0707320:intron 45.0%
TTACGTCTAGAAGGTGGATC+AGG - chr4_4:80552707-80552726 Msa0707320:intron 45.0%
GGCCACACTTTAACAAAGTC+AGG + chr4_4:80552788-80552807 None:intergenic 45.0%
! ACCAACTTTTATGGGTGTCC+AGG - chr4_4:80552906-80552925 Msa0707320:intron 45.0%
! CCAACTTTTATGGGTGTCCA+GGG - chr4_4:80552907-80552926 Msa0707320:intron 45.0%
GCAGGTAAAGCAACAATCAG+AGG + chr4_4:80552975-80552994 None:intergenic 45.0%
CGTGATACCTGTCAATTTGC+AGG + chr4_4:80552993-80553012 None:intergenic 45.0%
! AGGTATCACGCCTTTTGTGT+GGG - chr4_4:80553003-80553022 Msa0707320:intron 45.0%
AAGGTACATCTGACAGTACG+TGG - chr4_4:80553037-80553056 Msa0707320:intron 45.0%
TCACGTGACTGAAAGGTCAT+GGG + chr4_4:80553595-80553614 None:intergenic 45.0%
GTTGTTGTCACGTGACTGAA+AGG + chr4_4:80553602-80553621 None:intergenic 45.0%
ACAACTTTACCGTTGTGCCA+AGG - chr4_4:80553617-80553636 Msa0707320:three_prime_UTR 45.0%
TAAGAGACCCATACTGAAGG+GGG + chr4_4:80553645-80553664 None:intergenic 45.0%
GTCTGTGTCCATTGCTGATA+CGG - chr4_4:80554203-80554222 Msa0707320:three_prime_UTR 45.0%
TCTGTGTCCATTGCTGATAC+GGG - chr4_4:80554204-80554223 Msa0707320:three_prime_UTR 45.0%
CATCAACTTCAGGAGGCAAT+AGG + chr4_4:80554296-80554315 None:intergenic 45.0%
CTATTGCCTCCTGAAGTTGA+TGG - chr4_4:80554294-80554313 Msa0707320:three_prime_UTR 45.0%
!! ATTGCCTCCTGAAGTTGATG+GGG - chr4_4:80554296-80554315 Msa0707320:three_prime_UTR 45.0%
AACAGATCCCCATCAACTTC+AGG + chr4_4:80554306-80554325 None:intergenic 45.0%
GGACACAAATAATCAGCTGC+AGG - chr4_4:80554350-80554369 Msa0707320:three_prime_UTR 45.0%
AACTGTGTCACCGATCATGA+AGG - chr4_4:80554386-80554405 Msa0707320:three_prime_UTR 45.0%
ACTGTGTCACCGATCATGAA+GGG - chr4_4:80554387-80554406 Msa0707320:three_prime_UTR 45.0%
!!! GCATGGACTAGTTTTGGCAT+TGG + chr4_4:80554541-80554560 None:intergenic 45.0%
!!! TCGGTGGGCACTTTTTTAAC+TGG - chr4_4:80554597-80554616 Msa0707320:three_prime_UTR 45.0%
!! AAGTCTTCTGGAATCGAGCA+CGG + chr4_4:80554791-80554810 None:intergenic 45.0%
CCTTCCAAAGGAAAGTCTTC+TGG + chr4_4:80554803-80554822 None:intergenic 45.0%
CCAGAAGACTTTCCTTTGGA+AGG - chr4_4:80554800-80554819 Msa0707320:intron 45.0%
TTAAGAGGATTGTGGGAGAG+AGG - chr4_4:80555113-80555132 Msa0707320:intron 45.0%
! TTTTAAGCCTTTGGACAGGG+AGG + chr4_4:80555268-80555287 None:intergenic 45.0%
ACAAAAATGAAGGTGGGAGG+GGG + chr4_4:80555324-80555343 None:intergenic 45.0%
CTGCCCTCCTCATTTATTGA+AGG - chr4_4:80555367-80555386 Msa0707320:intron 45.0%
GAATTATAGACAAGGGGGAG+CGG + chr4_4:80555413-80555432 None:intergenic 45.0%
ATGTCAATGCTAGACCGTGA+TGG + chr4_4:80555435-80555454 None:intergenic 45.0%
TTCTGTGGAACAGCGCATAT+AGG + chr4_4:80555795-80555814 None:intergenic 45.0%
! CACACTTCTAAAGGCAAGCA+TGG + chr4_4:80555887-80555906 None:intergenic 45.0%
! TGCTTGCCTTTAGAAGTGTG+TGG - chr4_4:80555887-80555906 Msa0707320:three_prime_UTR 45.0%
ACGAAAGTTGTGCTTCTGGA+TGG - chr4_4:80555939-80555958 Msa0707320:intron 45.0%
GATCGATGCAAGGTTCAGAA+GGG + chr4_4:80556107-80556126 None:intergenic 45.0%
TGATCGATGCAAGGTTCAGA+AGG + chr4_4:80556108-80556127 None:intergenic 45.0%
AAGCTTCAACCGATAGTTCG+GGG + chr4_4:80556290-80556309 None:intergenic 45.0%
GAAGCTTCAACCGATAGTTC+GGG + chr4_4:80556291-80556310 None:intergenic 45.0%
TGAAGCTTCAGCCGATAGTT+CGG + chr4_4:80556421-80556440 None:intergenic 45.0%
GATGCTGCAATCTCCTTTGT+TGG + chr4_4:80556549-80556568 None:intergenic 45.0%
ACGAACCGTAAGCTTTCCAA+GGG - chr4_4:80556594-80556613 Msa0707320:three_prime_UTR 45.0%
CAAGTCCCTTGGAAAGCTTA+CGG + chr4_4:80556602-80556621 None:intergenic 45.0%
ATTAGTGTCAGCAAGTCCCT+TGG + chr4_4:80556613-80556632 None:intergenic 45.0%
!! CCTTTAGGGCTGCTATAACA+GGG - chr4_4:80556826-80556845 Msa0707320:intron 45.0%
TCTTTGCCTTCAGAGCTGAA+GGG + chr4_4:80556881-80556900 None:intergenic 45.0%
TTCTTTGCCTTCAGAGCTGA+AGG + chr4_4:80556882-80556901 None:intergenic 45.0%
TGCACGCTTTCTTCTACCAT+TGG + chr4_4:80556964-80556983 None:intergenic 45.0%
! ATGGTAGAAGAAAGCGTGCA+TGG - chr4_4:80556964-80556983 Msa0707320:intron 45.0%
! TGGTAGAAGAAAGCGTGCAT+GGG - chr4_4:80556965-80556984 Msa0707320:intron 45.0%
! AAGAAAGCGTGCATGGGATA+GGG - chr4_4:80556971-80556990 Msa0707320:intron 45.0%
TGGATTCTTGGCCTGACATT+CGG + chr4_4:80557123-80557142 None:intergenic 45.0%
! ATCTGTTTTCCCACGGAAAG+AGG - chr4_4:80557172-80557191 Msa0707320:intron 45.0%
GTTTGACATCCTCTTTCCGT+GGG + chr4_4:80557184-80557203 None:intergenic 45.0%
CAATTAAGCAGTCACTCAGG+AGG - chr4_4:80557374-80557393 Msa0707320:intron 45.0%
ATTAAGCAGTCACTCAGGAG+GGG - chr4_4:80557376-80557395 Msa0707320:intron 45.0%
GCATCAGTTTCTTCTTCAGC+TGG - chr4_4:80557398-80557417 Msa0707320:intron 45.0%
! TTTTCTCGCAAGAACCTCCA+AGG + chr4_4:80557492-80557511 None:intergenic 45.0%
AACACCGGTCTCATATCAGT+TGG + chr4_4:80557705-80557724 None:intergenic 45.0%
AACTGATATGAGACCGGTGT+TGG - chr4_4:80557704-80557723 Msa0707320:intron 45.0%
! TGCCGACTGCGAACTAATTT+AGG - chr4_4:80557924-80557943 Msa0707320:intron 45.0%
GCCGACTGCGAACTAATTTA+GGG - chr4_4:80557925-80557944 Msa0707320:intron 45.0%
AGGGTCCTTGACAGTTTAGA+AGG - chr4_4:80557944-80557963 Msa0707320:intron 45.0%
GTCCTTGACAGTTTAGAAGG+AGG - chr4_4:80557947-80557966 Msa0707320:intron 45.0%
TCCCTCCTTCTAAACTGTCA+AGG + chr4_4:80557952-80557971 None:intergenic 45.0%
TTGACAGTTTAGAAGGAGGG+AGG - chr4_4:80557951-80557970 Msa0707320:intron 45.0%
TGACAGTTTAGAAGGAGGGA+GGG - chr4_4:80557952-80557971 Msa0707320:intron 45.0%
GGGCTTGGGAAAAAAAAGGA+AGG - chr4_4:80557972-80557991 Msa0707320:intron 45.0%
! ACGAACTCCCCATTCTAGTT+GGG + chr4_4:80558029-80558048 None:intergenic 45.0%
AACGAACTCCCCATTCTAGT+TGG + chr4_4:80558030-80558049 None:intergenic 45.0%
GTAAAAGCCAAGGCTCTGTT+TGG + chr4_4:80558370-80558389 None:intergenic 45.0%
GTTACCAAACCACAAACACC+TGG - chr4_4:80558405-80558424 Msa0707320:intron 45.0%
AACTGGGATTAAGCCAACGA+TGG + chr4_4:80558446-80558465 None:intergenic 45.0%
TCTTCAATAAGCGTTCCGTC+AGG + chr4_4:80558655-80558674 None:intergenic 45.0%
TAGAACTGCAGACACAGAGT+TGG - chr4_4:80558697-80558716 Msa0707320:intron 45.0%
! CATCCCGAGCTGGATATTTT+TGG - chr4_4:80559058-80559077 Msa0707320:intron 45.0%
! TGTTTTCTTCAAGCTCGTGG+TGG + chr4_4:80559191-80559210 None:intergenic 45.0%
TGGATAGTGCAGACTGTAAG+GGG - chr4_4:80559221-80559240 Msa0707320:intron 45.0%
! GAAAACAATGAAGTGCCAGG+AGG - chr4_4:80559247-80559266 Msa0707320:intron 45.0%
ACTGCATCTCTGTGACAGTT+TGG + chr4_4:80559286-80559305 None:intergenic 45.0%
GCCAATCTCTGCATTAATGG+TGG + chr4_4:80559320-80559339 None:intergenic 45.0%
CTGGCCAATCTCTGCATTAA+TGG + chr4_4:80559323-80559342 None:intergenic 45.0%
TGGTAGGAGTCCAGAAGAAA+CGG + chr4_4:80559350-80559369 None:intergenic 45.0%
ATTACATGGAGAGGGCAAGA+CGG - chr4_4:80559471-80559490 Msa0707320:intron 45.0%
AGTCGCGTTCTTCTTCCTTA+TGG + chr4_4:80559522-80559541 None:intergenic 45.0%
! GCAGTAAATGGTGCTGAAGT+AGG - chr4_4:80559550-80559569 Msa0707320:intron 45.0%
!! GAGGTTTGCTAGTGATGGTA+GGG + chr4_4:80559606-80559625 None:intergenic 45.0%
GCAAACCTCCTAATACATCC+GGG - chr4_4:80559617-80559636 Msa0707320:intron 45.0%
! CATTGTTTGACTTCTGGGCA+GGG + chr4_4:80559684-80559703 None:intergenic 45.0%
! TCATTGTTTGACTTCTGGGC+AGG + chr4_4:80559685-80559704 None:intergenic 45.0%
ACAGGTAGAAGCCTACATCA+AGG - chr4_4:80560046-80560065 Msa0707320:CDS 45.0%
CCTGATATGCTCCTTGATGT+AGG + chr4_4:80560060-80560079 None:intergenic 45.0%
! CCTACATCAAGGAGCATATC+AGG - chr4_4:80560057-80560076 Msa0707320:CDS 45.0%
ATCACACCACTCTTGCACAA+TGG + chr4_4:80560083-80560102 None:intergenic 45.0%
! GGTGCTACATTGCGAACAAT+AGG - chr4_4:80560414-80560433 Msa0707320:intron 45.0%
!! TGGGAGGTACTCAAAGTGAA+AGG - chr4_4:80560539-80560558 Msa0707320:intron 45.0%
ACAAAACTACAGAGGCCATG+AGG + chr4_4:80560586-80560605 None:intergenic 45.0%
ATTGGCAGATTCTATAGGGG+TGG - chr4_4:80560606-80560625 Msa0707320:exon 45.0%
!! ATAAATAAATACTAAAAATT+CGG + chr4_4:80551238-80551257 None:intergenic 5.0%
ATCCAGGCACGGAAATTCGA+AGG + chr4_4:80550175-80550194 None:intergenic 50.0%
TCGAATTTCCGTGCCTGGAT+TGG - chr4_4:80550175-80550194 Msa0707320:three_prime_UTR 50.0%
GACGTTGAAGGGGAAACATG+TGG - chr4_4:80550524-80550543 Msa0707320:three_prime_UTR 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr4_4:80551371-80551390 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr4_4:80551368-80551387 Msa0707320:three_prime_UTR 50.0%
CGACACCACTTAGTGGGATA+AGG + chr4_4:80551376-80551395 None:intergenic 50.0%
TGTAGCCGACACCACTTAGT+GGG + chr4_4:80551382-80551401 None:intergenic 50.0%
ATGTAGCCGACACCACTTAG+TGG + chr4_4:80551383-80551402 None:intergenic 50.0%
!! ACTAAGTGGTGTCGGCTACA+TGG - chr4_4:80551382-80551401 Msa0707320:three_prime_UTR 50.0%
CACTCTTTCCAGAGTCATGC+AGG - chr4_4:80551864-80551883 Msa0707320:three_prime_UTR 50.0%
TTGTGGTGCACCCAACGAAA+AGG + chr4_4:80552173-80552192 None:intergenic 50.0%
GGACAGTTACGTCTAGAAGG+TGG - chr4_4:80552701-80552720 Msa0707320:intron 50.0%
CCCTGGACACCCATAAAAGT+TGG + chr4_4:80552910-80552929 None:intergenic 50.0%
! CAGGTATCACGCCTTTTGTG+TGG - chr4_4:80553002-80553021 Msa0707320:intron 50.0%
ACAGTACGTGGTTATGCCCA+AGG - chr4_4:80553049-80553068 Msa0707320:intron 50.0%
! ACACGGGAGCTTTAGTGCAT+CGG + chr4_4:80553482-80553501 None:intergenic 50.0%
ACTAAAGCTCCCGTGTACAC+AGG - chr4_4:80553486-80553505 Msa0707320:three_prime_UTR 50.0%
CTAAAGCTCCCGTGTACACA+GGG - chr4_4:80553487-80553506 Msa0707320:three_prime_UTR 50.0%
AAGGTCATGGGTTCAAGTCC+TGG + chr4_4:80553583-80553602 None:intergenic 50.0%
GTCACGTGACTGAAAGGTCA+TGG + chr4_4:80553596-80553615 None:intergenic 50.0%
TTCAATAAAGGGGGCTTCCC+TGG - chr4_4:80554134-80554153 Msa0707320:three_prime_UTR 50.0%
TGTCTCTCCCGTATCAGCAA+TGG + chr4_4:80554214-80554233 None:intergenic 50.0%
GACAGCTGTGGTTGTCTCAA+TGG - chr4_4:80554230-80554249 Msa0707320:three_prime_UTR 50.0%
AGGCCTCTCTCACTTGTTTC+TGG + chr4_4:80554276-80554295 None:intergenic 50.0%
AGATCCCCATCAACTTCAGG+AGG + chr4_4:80554303-80554322 None:intergenic 50.0%
!! CGTGAACCGAGTAGCTTTGA+TGG - chr4_4:80554495-80554514 Msa0707320:three_prime_UTR 50.0%
!! AGTCTTCTGGAATCGAGCAC+GGG + chr4_4:80554790-80554809 None:intergenic 50.0%
CGTGATTCCCAGTCTAAGAG+TGG + chr4_4:80554877-80554896 None:intergenic 50.0%
CTTAGACTGGGAATCACGAG+TGG - chr4_4:80554879-80554898 Msa0707320:intron 50.0%
TTGTGATGACAGTGCCAGAG+TGG - chr4_4:80554996-80555015 Msa0707320:intron 50.0%
ATGCAAACCTCCCTGTCCAA+AGG - chr4_4:80555258-80555277 Msa0707320:intron 50.0%
ATGAGGAGGGCAGAAAGGAA+GGG + chr4_4:80555360-80555379 None:intergenic 50.0%
AATGAGGAGGGCAGAAAGGA+AGG + chr4_4:80555361-80555380 None:intergenic 50.0%
AGATGCCAACCCCGAACTAT+CGG - chr4_4:80556278-80556297 Msa0707320:intron 50.0%
TTCAACCGATAGTTCGGGGT+TGG + chr4_4:80556286-80556305 None:intergenic 50.0%
CATTTGACTAGCAGCTGCTC+TGG + chr4_4:80556325-80556344 None:intergenic 50.0%
AGATGCCAACCCCGAACTAT+CGG - chr4_4:80556278-80556297 Msa0707320:intron 50.0%
AAGCTTCAGCCGATAGTTCG+GGG + chr4_4:80556419-80556438 None:intergenic 50.0%
GAAGCTTCAGCCGATAGTTC+GGG + chr4_4:80556420-80556439 None:intergenic 50.0%
CATTTGACTAGCAGCTGCTC+TGG + chr4_4:80556325-80556344 None:intergenic 50.0%
GACGAACCGTAAGCTTTCCA+AGG - chr4_4:80556593-80556612 Msa0707320:three_prime_UTR 50.0%
!! GCCTTTAGGGCTGCTATAAC+AGG - chr4_4:80556825-80556844 Msa0707320:intron 50.0%
CCCTGTTATAGCAGCCCTAA+AGG + chr4_4:80556829-80556848 None:intergenic 50.0%
! GTTATCCCCTTCAGCTCTGA+AGG - chr4_4:80556872-80556891 Msa0707320:intron 50.0%
CTTTGCCTTCAGAGCTGAAG+GGG + chr4_4:80556880-80556899 None:intergenic 50.0%
! GAAGAAAGCGTGCATGGGAT+AGG - chr4_4:80556970-80556989 Msa0707320:intron 50.0%
GGATTCTTGGCCTGACATTC+GGG + chr4_4:80557122-80557141 None:intergenic 50.0%
GGTTTGACATCCTCTTTCCG+TGG + chr4_4:80557185-80557204 None:intergenic 50.0%
AAGATTGTACGTGGTCCAGC+TGG - chr4_4:80557344-80557363 Msa0707320:intron 50.0%
! TCTTCAGCTGGTGCCAAAGT+TGG - chr4_4:80557410-80557429 Msa0707320:intron 50.0%
! TGGTGCCAAAGTTGGCACAA+AGG - chr4_4:80557418-80557437 Msa0707320:intron 50.0%
AATTCCTGTATCCGTGAGGC+AGG - chr4_4:80557746-80557765 Msa0707320:intron 50.0%
TAGTTCGCAGTCGGCAGAAA+GGG + chr4_4:80557920-80557939 None:intergenic 50.0%
TTAGTTCGCAGTCGGCAGAA+AGG + chr4_4:80557921-80557940 None:intergenic 50.0%
TTTAGAAGGAGGGAGGGCTT+GGG - chr4_4:80557958-80557977 Msa0707320:intron 50.0%
GGGAGGGCTTGGGAAAAAAA+AGG - chr4_4:80557968-80557987 Msa0707320:intron 50.0%
ATGGACCCCCCAACTAGAAT+GGG - chr4_4:80558018-80558037 Msa0707320:intron 50.0%
! AACTCCCCATTCTAGTTGGG+GGG + chr4_4:80558026-80558045 None:intergenic 50.0%
! GAACTCCCCATTCTAGTTGG+GGG + chr4_4:80558027-80558046 None:intergenic 50.0%
! CGAACTCCCCATTCTAGTTG+GGG + chr4_4:80558028-80558047 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGGA+GGG + chr4_4:80558220-80558239 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr4_4:80558222-80558241 None:intergenic 50.0%
! CTCTGTTTGGGACTTTGCAG+GGG + chr4_4:80558357-80558376 None:intergenic 50.0%
! GCTCTGTTTGGGACTTTGCA+GGG + chr4_4:80558358-80558377 None:intergenic 50.0%
CAAAGTCCCAAACAGAGCCT+TGG - chr4_4:80558360-80558379 Msa0707320:intron 50.0%
GCAACCAGGTGTTTGTGGTT+TGG + chr4_4:80558412-80558431 None:intergenic 50.0%
CAGTAGCAACCAGGTGTTTG+TGG + chr4_4:80558417-80558436 None:intergenic 50.0%
TCAATAAGCGTTCCGTCAGG+CGG + chr4_4:80558652-80558671 None:intergenic 50.0%
! AGTTTGCACGGGTGATGATG+AGG + chr4_4:80558867-80558886 None:intergenic 50.0%
TTGTTCTTGTGGGGACTGCT+TGG + chr4_4:80558980-80558999 None:intergenic 50.0%
ACTAGAATCTCATCCCGAGC+TGG - chr4_4:80559048-80559067 Msa0707320:intron 50.0%
! GTGACAGTTTGGTGAGCAAG+AGG + chr4_4:80559275-80559294 None:intergenic 50.0%
TCACAGAGATGCAGTCCAGA+AGG - chr4_4:80559291-80559310 Msa0707320:three_prime_UTR 50.0%
AGGAGTCCAGAAGAAACGGA+AGG + chr4_4:80559346-80559365 None:intergenic 50.0%
TCTGGACTCCTACCATGTGA+AGG - chr4_4:80559355-80559374 Msa0707320:intron 50.0%
CAACAGCACCTTCACATGGT+AGG + chr4_4:80559366-80559385 None:intergenic 50.0%
GGATCAACAGCACCTTCACA+TGG + chr4_4:80559370-80559389 None:intergenic 50.0%
!! GGAGGTTTGCTAGTGATGGT+AGG + chr4_4:80559607-80559626 None:intergenic 50.0%
TCATCGGTCCCGGATGTATT+AGG + chr4_4:80559628-80559647 None:intergenic 50.0%
ATCAGGCCATTGTGCAAGAG+TGG - chr4_4:80560074-80560093 Msa0707320:intron 50.0%
GTGCAAGAGTGGTGTGATCA+CGG - chr4_4:80560085-80560104 Msa0707320:intron 50.0%
TGATCACGGCTGAACAGTAC+AGG - chr4_4:80560099-80560118 Msa0707320:intron 50.0%
AAACTCGCGGAGCAGTATGT+TGG - chr4_4:80560215-80560234 Msa0707320:intron 50.0%
GTGCAGTGTGATTCATTCGC+TGG - chr4_4:80560477-80560496 Msa0707320:intron 50.0%
AAACTACAGAGGCCATGAGG+AGG + chr4_4:80560583-80560602 None:intergenic 50.0%
!! ATGCTGGCTCAAGTCGTCGT+TGG - chr4_4:80550706-80550725 Msa0707320:three_prime_UTR 55.0%
! CACGGGAGCTTTAGTGCATC+GGG + chr4_4:80553481-80553500 None:intergenic 55.0%
TTCCCGAACCCTGTGTACAC+GGG + chr4_4:80553498-80553517 None:intergenic 55.0%
CTTCCCGAACCCTGTGTACA+CGG + chr4_4:80553499-80553518 None:intergenic 55.0%
GTGTACACAGGGTTCGGGAA+GGG - chr4_4:80553498-80553517 Msa0707320:three_prime_UTR 55.0%
TGTACACAGGGTTCGGGAAG+GGG - chr4_4:80553499-80553518 Msa0707320:three_prime_UTR 55.0%
CAAGGCTCCCCCTTCAGTAT+GGG - chr4_4:80553635-80553654 Msa0707320:three_prime_UTR 55.0%
TGATACGGGAGAGACAGCTG+TGG - chr4_4:80554218-80554237 Msa0707320:three_prime_UTR 55.0%
CCTCTTTCTACCAGCCACTC+TGG + chr4_4:80555013-80555032 None:intergenic 55.0%
CCAGAGTGGCTGGTAGAAAG+AGG - chr4_4:80555010-80555029 Msa0707320:intron 55.0%
ATGAAGGTGGGAGGGGGATA+GGG + chr4_4:80555318-80555337 None:intergenic 55.0%
AATGAAGGTGGGAGGGGGAT+AGG + chr4_4:80555319-80555338 None:intergenic 55.0%
TTCAGCCGATAGTTCGGGGT+TGG + chr4_4:80556415-80556434 None:intergenic 55.0%
CTTACCTGCCTCACGGATAC+AGG + chr4_4:80557753-80557772 None:intergenic 55.0%
GCTACAGCTTACCTGCCTCA+CGG + chr4_4:80557760-80557779 None:intergenic 55.0%
GTTTAGAAGGAGGGAGGGCT+TGG - chr4_4:80557957-80557976 Msa0707320:intron 55.0%
GATGGACCCCCCAACTAGAA+TGG - chr4_4:80558017-80558036 Msa0707320:intron 55.0%
TGGACCCCCCAACTAGAATG+GGG - chr4_4:80558019-80558038 Msa0707320:intron 55.0%
AGAGAGAGAGAGAGGAGGGA+GGG + chr4_4:80558216-80558235 None:intergenic 55.0%
GAGAGAGAGAGAGAGAGAGG+AGG + chr4_4:80558221-80558240 None:intergenic 55.0%
GAGAGAGAGAGAGAGGGAGA+GGG + chr4_4:80558311-80558330 None:intergenic 55.0%
GAGAGGGAGAGAGAGAGAGA+GGG + chr4_4:80558289-80558308 None:intergenic 55.0%
AGAGAGGGAGAGAGAGAGAG+AGG + chr4_4:80558318-80558337 None:intergenic 55.0%
! TTTGCAGGGGAGGGCTTTAG+GGG + chr4_4:80558344-80558363 None:intergenic 55.0%
CTTTGCAGGGGAGGGCTTTA+GGG + chr4_4:80558345-80558364 None:intergenic 55.0%
ACTTTGCAGGGGAGGGCTTT+AGG + chr4_4:80558346-80558365 None:intergenic 55.0%
! GTTTGGGACTTTGCAGGGGA+GGG + chr4_4:80558353-80558372 None:intergenic 55.0%
! TGTTTGGGACTTTGCAGGGG+AGG + chr4_4:80558354-80558373 None:intergenic 55.0%
! GGCTCTGTTTGGGACTTTGC+AGG + chr4_4:80558359-80558378 None:intergenic 55.0%
! TGCACGGGTGATGATGAGGT+TGG + chr4_4:80558863-80558882 None:intergenic 55.0%
TTCTTGTGGGGACTGCTTGG+AGG + chr4_4:80558977-80558996 None:intergenic 55.0%
GTCCAGAAGAAACGGAAGGC+TGG + chr4_4:80559342-80559361 None:intergenic 55.0%
TCGGTCCCGGATGTATTAGG+AGG + chr4_4:80559625-80559644 None:intergenic 55.0%
TCACGGCTGAACAGTACAGG+TGG - chr4_4:80560102-80560121 Msa0707320:intron 55.0%
CACGGCTGAACAGTACAGGT+GGG - chr4_4:80560103-80560122 Msa0707320:intron 55.0%
GGCCTTCGAATTTCCGTGCC+TGG - chr4_4:80550170-80550189 Msa0707320:three_prime_UTR 60.0%
GCTCCCGTGTACACAGGGTT+CGG - chr4_4:80553492-80553511 Msa0707320:three_prime_UTR 60.0%
CTCCCGTGTACACAGGGTTC+GGG - chr4_4:80553493-80553512 Msa0707320:three_prime_UTR 60.0%
CGTGTACACAGGGTTCGGGA+AGG - chr4_4:80553497-80553516 Msa0707320:three_prime_UTR 60.0%
! GGGAAGGGGTCCCACCATTT+TGG - chr4_4:80553513-80553532 Msa0707320:three_prime_UTR 60.0%
AAGGGGGAGCCTTGGCACAA+CGG + chr4_4:80553629-80553648 None:intergenic 60.0%
CCATACTGAAGGGGGAGCCT+TGG + chr4_4:80553637-80553656 None:intergenic 60.0%
CCAAGGCTCCCCCTTCAGTA+TGG - chr4_4:80553634-80553653 Msa0707320:three_prime_UTR 60.0%
GATGACAGTGCCAGAGTGGC+TGG - chr4_4:80555000-80555019 Msa0707320:intron 60.0%
TGAAGGTGGGAGGGGGATAG+GGG + chr4_4:80555317-80555336 None:intergenic 60.0%
AGGGGGAGCGGAGAGATTTG+AGG + chr4_4:80555401-80555420 None:intergenic 60.0%
CGGGAGCTCGCTCTGATTCT+GGG + chr4_4:80557103-80557122 None:intergenic 60.0%
TCGGGAGCTCGCTCTGATTC+TGG + chr4_4:80557104-80557123 None:intergenic 60.0%
AGAGCGAGCTCCCGAATGTC+AGG - chr4_4:80557109-80557128 Msa0707320:intron 60.0%
! TGGCGACAAGGTGCCAACAC+CGG + chr4_4:80557720-80557739 None:intergenic 60.0%
AGGGAGGGAGAGAGAGAGAG+AGG + chr4_4:80558201-80558220 None:intergenic 60.0%
GAGAGAGAGAGAGAGGAGGG+AGG + chr4_4:80558217-80558236 None:intergenic 60.0%
GAGAGAGAGGGAGAGGGAGA+GGG + chr4_4:80558305-80558324 None:intergenic 60.0%
AGAGAGAGAGGGAGAGGGAG+AGG + chr4_4:80558306-80558325 None:intergenic 60.0%
GGAGAGAGAGAGAGAGGGAG+AGG + chr4_4:80558312-80558331 None:intergenic 60.0%
!! GGGCTTTAGGGGGAGAGAGA+GGG + chr4_4:80558333-80558352 None:intergenic 60.0%
!! AGGGCTTTAGGGGGAGAGAG+AGG + chr4_4:80558334-80558353 None:intergenic 60.0%
!! TTGCAGGGGAGGGCTTTAGG+GGG + chr4_4:80558343-80558362 None:intergenic 60.0%
GACACAGCTGTACCGCCTGA+CGG - chr4_4:80558637-80558656 Msa0707320:intron 60.0%
GGCCAGCCTTCCGTTTCTTC+TGG - chr4_4:80559337-80559356 Msa0707320:intron 60.0%
!! GGTGAGCAAGAGGCACCTCC+TGG + chr4_4:80559265-80559284 None:intergenic 65.0%
GTGGGAGGGGGATAGGGGAG+AGG + chr4_4:80555312-80555331 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 80550142 80560771 80550142 ID=Msa0707320;Name=Msa0707320
chr4_4 mRNA 80550142 80560771 80550142 ID=Msa0707320-mRNA-1;Parent=Msa0707320;Name=Msa0707320-mRNA-1;_AED=0.02;_eAED=0.02;_QI=155|1|1|1|0.92|0.85|14|4213|101
chr4_4 exon 80550142 80550863 80550142 ID=Msa0707320-mRNA-1:exon:26233;Parent=Msa0707320-mRNA-1
chr4_4 exon 80551190 80552275 80551190 ID=Msa0707320-mRNA-1:exon:26232;Parent=Msa0707320-mRNA-1
chr4_4 exon 80553146 80553220 80553146 ID=Msa0707320-mRNA-1:exon:26231;Parent=Msa0707320-mRNA-1
chr4_4 exon 80553324 80554668 80553324 ID=Msa0707320-mRNA-1:exon:26230;Parent=Msa0707320-mRNA-1
chr4_4 exon 80555864 80555939 80555864 ID=Msa0707320-mRNA-1:exon:26229;Parent=Msa0707320-mRNA-1
chr4_4 exon 80556092 80556172 80556092 ID=Msa0707320-mRNA-1:exon:26228;Parent=Msa0707320-mRNA-1
chr4_4 exon 80556295 80556818 80556295 ID=Msa0707320-mRNA-1:exon:26227;Parent=Msa0707320-mRNA-1
chr4_4 exon 80557843 80557908 80557843 ID=Msa0707320-mRNA-1:exon:26226;Parent=Msa0707320-mRNA-1
chr4_4 exon 80558436 80558545 80558436 ID=Msa0707320-mRNA-1:exon:26225;Parent=Msa0707320-mRNA-1
chr4_4 exon 80559251 80559320 80559251 ID=Msa0707320-mRNA-1:exon:26224;Parent=Msa0707320-mRNA-1
chr4_4 exon 80559714 80559763 80559714 ID=Msa0707320-mRNA-1:exon:26223;Parent=Msa0707320-mRNA-1
chr4_4 exon 80559930 80560082 80559930 ID=Msa0707320-mRNA-1:exon:26222;Parent=Msa0707320-mRNA-1
chr4_4 exon 80560313 80560398 80560313 ID=Msa0707320-mRNA-1:exon:26221;Parent=Msa0707320-mRNA-1
chr4_4 exon 80560542 80560771 80560542 ID=Msa0707320-mRNA-1:exon:26220;Parent=Msa0707320-mRNA-1
chr4_4 five_prime_UTR 80560617 80560771 80560617 ID=Msa0707320-mRNA-1:five_prime_utr;Parent=Msa0707320-mRNA-1
chr4_4 CDS 80560542 80560616 80560542 ID=Msa0707320-mRNA-1:cds;Parent=Msa0707320-mRNA-1
chr4_4 CDS 80560313 80560398 80560313 ID=Msa0707320-mRNA-1:cds;Parent=Msa0707320-mRNA-1
chr4_4 CDS 80559938 80560082 80559938 ID=Msa0707320-mRNA-1:cds;Parent=Msa0707320-mRNA-1
chr4_4 three_prime_UTR 80559930 80559937 80559930 ID=Msa0707320-mRNA-1:three_prime_utr;Parent=Msa0707320-mRNA-1
chr4_4 three_prime_UTR 80559714 80559763 80559714 ID=Msa0707320-mRNA-1:three_prime_utr;Parent=Msa0707320-mRNA-1
chr4_4 three_prime_UTR 80559251 80559320 80559251 ID=Msa0707320-mRNA-1:three_prime_utr;Parent=Msa0707320-mRNA-1
chr4_4 three_prime_UTR 80558436 80558545 80558436 ID=Msa0707320-mRNA-1:three_prime_utr;Parent=Msa0707320-mRNA-1
chr4_4 three_prime_UTR 80557843 80557908 80557843 ID=Msa0707320-mRNA-1:three_prime_utr;Parent=Msa0707320-mRNA-1
chr4_4 three_prime_UTR 80556295 80556818 80556295 ID=Msa0707320-mRNA-1:three_prime_utr;Parent=Msa0707320-mRNA-1
chr4_4 three_prime_UTR 80556092 80556172 80556092 ID=Msa0707320-mRNA-1:three_prime_utr;Parent=Msa0707320-mRNA-1
chr4_4 three_prime_UTR 80555864 80555939 80555864 ID=Msa0707320-mRNA-1:three_prime_utr;Parent=Msa0707320-mRNA-1
chr4_4 three_prime_UTR 80553324 80554668 80553324 ID=Msa0707320-mRNA-1:three_prime_utr;Parent=Msa0707320-mRNA-1
chr4_4 three_prime_UTR 80553146 80553220 80553146 ID=Msa0707320-mRNA-1:three_prime_utr;Parent=Msa0707320-mRNA-1
chr4_4 three_prime_UTR 80551190 80552275 80551190 ID=Msa0707320-mRNA-1:three_prime_utr;Parent=Msa0707320-mRNA-1
chr4_4 three_prime_UTR 80550142 80550863 80550142 ID=Msa0707320-mRNA-1:three_prime_utr;Parent=Msa0707320-mRNA-1
Gene Sequence

>Msa0707320

ATGGAATCAGATTTCGAGACGAACGATGATATGCTGACACTCTCACAGGATCCATTTGATGATGCCAACGACAATGATAATTTGGACGTTGAAGGGGAAACATGTGGAATATGTATGGATATGGTTATTGACAGGGGAGTATTGGATTGCTGTCAGCACTGGTTCTGCTTTGTATGTATTGACAACTGGGCTACCATCACTAATCTCTGCCCACTTTGCCAGAATGAGTTTCAGTTGATCACTTGTGTTCCAGTGAGTCATATAAATTTGCGGAATGCTGCTTTTATCTTCCTTCATTTAATATAA
Protein sequence

>Msa0707320

MESDFETNDDMLTLSQDPFDDANDNDNLDVEGETCGICMDMVIDRGVLDCCQHWFCFVCIDNWATITNLCPLCQNEFQLITCVPVSHINLRNAAFIFLHLI*