AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1393500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1393500 MtrunA17_Chr8g0388341 88.252 1081 41 2 1 1039 234 1270 0.0 1905
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1393500 AT4G10930.1 49.040 573 247 12 285 842 414 956 3.77e-147 470
Msa1393500 AT4G10930.2 49.040 573 247 12 285 842 409 951 5.25e-147 469

Find 268 sgRNAs with CRISPR-Local

Find 653 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGGGAGCTCGCTCTGATTC+TGG 0.072097 tig0021743:-5419 None:intergenic
TAATTTCCTTCCTTAGATTT+TGG 0.133665 tig0021743:-5052 None:intergenic
CTGTGCATATTTAGCTAAAA+TGG 0.151667 tig0021743:+8838 Msa1393500:three_prime_UTR
AGGCCTCTCTCACTTGTTTC+TGG 0.153394 tig0021743:-2591 None:intergenic
CATTCACTGTTAGTATTATC+TGG 0.160173 tig0021743:-2483 None:intergenic
TTTATAAGTGGTTCTTTATC+AGG 0.190528 tig0021743:-7740 None:intergenic
CTTTCACAGAATCAGATTTA+AGG 0.198788 tig0021743:-5766 None:intergenic
CTTCGTGCATAGCGATTTAA+AGG 0.212127 tig0021743:+2770 Msa1393500:CDS
AAAATCTTCTCGAAGCCTTT+AGG 0.231661 tig0021743:+5129 Msa1393500:CDS
TGAAAGGTGATAAAAGAAAA+TGG 0.240611 tig0021743:+5783 Msa1393500:CDS
GGCCAGCCTTCCGTTTCTTC+TGG 0.249709 tig0021743:+7656 Msa1393500:CDS
GATATAATGAATATAGTTAA+AGG 0.267083 tig0021743:+4888 Msa1393500:CDS
CCTTCCAAAGGAAAGTCTTC+TGG 0.270839 tig0021743:-3118 None:intergenic
ATGCAAAATTGAATCTGATA+TGG 0.280001 tig0021743:+2875 Msa1393500:CDS
GGGTCTTCATCTTGGTTTAT+CGG 0.282538 tig0021743:+2896 Msa1393500:CDS
CTGGCCAATCTCTGCATTAA+TGG 0.289046 tig0021743:-7639 None:intergenic
AGTCGCGTTCTTCTTCCTTA+TGG 0.300027 tig0021743:-7838 None:intergenic
GCAAGTGTTGAAGAAGATTC+TGG 0.303824 tig0021743:+734 Msa1393500:five_prime_UTR
AAATCTTCTCGAAGCCTTTA+GGG 0.304999 tig0021743:+5130 Msa1393500:CDS
TTGTATTGGCAGATTCTATA+GGG 0.312349 tig0021743:+8921 Msa1393500:three_prime_UTR
GTCTCATATCAGTTGGCAAT+TGG 0.314592 tig0021743:-6013 None:intergenic
GCCTTTAGGGCTGCTATAAC+AGG 0.315732 tig0021743:+5143 Msa1393500:CDS
AACAGATGGCAATTCAATAA+AGG 0.316631 tig0021743:+2440 Msa1393500:five_prime_UTR
TCAGAATTTGAAGATTTATA+CGG 0.316787 tig0021743:+7716 Msa1393500:CDS
TCTGGAAAGAATTGGATTCT+TGG 0.322471 tig0021743:-5450 None:intergenic
CGGGAGCTCGCTCTGATTCT+GGG 0.327606 tig0021743:-5418 None:intergenic
TGATTCCGAGAAAGAATATT+CGG 0.329555 tig0021743:+8759 Msa1393500:three_prime_UTR
GGGATTGTGAAATTGAGTTT+TGG 0.333583 tig0021743:+5309 Msa1393500:CDS
CATTAATGGTGGAATCCTTC+TGG 0.335776 tig0021743:-7625 None:intergenic
GAAGCTTCAGCCGATAGTTC+GGG 0.337441 tig0021743:-4735 None:intergenic
CCTACATCAAGGAGCATATC+AGG 0.338678 tig0021743:+8376 Msa1393500:CDS
CCTCACTAGTCCAAAATCTA+AGG 0.343630 tig0021743:+5042 Msa1393500:CDS
TAGATTTGACACCATGAAAA+TGG 0.344866 tig0021743:+8712 Msa1393500:three_prime_UTR
GGTGCTACATTGCGAACAAT+AGG 0.351220 tig0021743:+8733 Msa1393500:three_prime_UTR
TTGAGGATGAAATGGTGATA+TGG 0.351345 tig0021743:-8588 None:intergenic
TGAAGCTTCAGCCGATAGTT+CGG 0.351589 tig0021743:-4736 None:intergenic
TGGATTCTTGGCCTGACATT+CGG 0.351968 tig0021743:-5438 None:intergenic
CTTTCCCGAATATTCTTTCT+CGG 0.354466 tig0021743:-8764 None:intergenic
CTTGCGATTCATGTGATCTA+TGG 0.364336 tig0021743:+774 Msa1393500:five_prime_UTR
TGAAGCTTCAACCGATAGTT+CGG 0.367125 tig0021743:-4607 None:intergenic
GACTTAGACAAAGCAGTAAA+TGG 0.369446 tig0021743:+7857 Msa1393500:CDS
CAACGTCACACCTAACAAAA+AGG 0.369654 tig0021743:-8642 None:intergenic
TATTATCTGGGTTAAATTCC+AGG 0.369880 tig0021743:-2470 None:intergenic
GATGCTGCAATCTCCTTTGT+TGG 0.370503 tig0021743:-4864 None:intergenic
ATATACAATCTGGAAAGAAT+TGG 0.372942 tig0021743:-5458 None:intergenic
GCATCAGTTTCTTCTTCAGC+TGG 0.373052 tig0021743:+5716 Msa1393500:CDS
GAATGCTAATTTCCTCATAA+AGG 0.377921 tig0021743:+8494 Msa1393500:CDS
CGTGAACCGAGTAGCTTTGA+TGG 0.379852 tig0021743:+2813 Msa1393500:CDS
GGATTCTTGGCCTGACATTC+GGG 0.380821 tig0021743:-5437 None:intergenic
TTTCTGGAATCCATTTGTTT+CGG 0.382216 tig0021743:-2575 None:intergenic
CTTTCTCACCTTCCTTTATG+AGG 0.383794 tig0021743:-8506 None:intergenic
TCTGATATGGGTCTTCATCT+TGG 0.392960 tig0021743:+2888 Msa1393500:CDS
TTTGTATTGGCAGATTCTAT+AGG 0.394537 tig0021743:+8920 Msa1393500:three_prime_UTR
TTTCTCAGATAAACAAACTT+TGG 0.395771 tig0021743:-5630 None:intergenic
TCTTCAAATTCTGAATCAAC+TGG 0.396421 tig0021743:-7707 None:intergenic
TACATATTTCATTGTTCTTG+TGG 0.397541 tig0021743:-7307 None:intergenic
CATTTGACTAGCAGCTGCTC+TGG 0.397549 tig0021743:-4640 None:intergenic
CATTTGACTAGCAGCTGCTC+TGG 0.397549 tig0021743:-4769 None:intergenic
TCCACCATTAATGCAGAGAT+TGG 0.398293 tig0021743:+7635 Msa1393500:CDS
TGCACGAAGGATTTAGAAGT+TGG 0.400122 tig0021743:-2756 None:intergenic
TTGTCATCAACAGATTGATT+TGG 0.401400 tig0021743:-5566 None:intergenic
CAAATCCTCTATAAACTTTG+AGG 0.403161 tig0021743:+5091 Msa1393500:CDS
AGATTCCTTTGTGCCAACTT+TGG 0.404039 tig0021743:-5741 None:intergenic
ACAGATGGCAATTCAATAAA+GGG 0.406400 tig0021743:+2441 Msa1393500:five_prime_UTR
TTTGTAGGCAGTTACTTGCT+TGG 0.409234 tig0021743:+679 Msa1393500:five_prime_UTR
GAAGAAAACAAATAATGCTT+TGG 0.415132 tig0021743:+7520 Msa1393500:CDS
AAAGTTGGCACAAAGGAATC+TGG 0.416752 tig0021743:+5743 Msa1393500:CDS
CTTACCTGCCTCACGGATAC+AGG 0.418225 tig0021743:-6068 None:intergenic
TTCAACGCTATTTGAACTGC+AGG 0.418515 tig0021743:-7245 None:intergenic
AATGATTGTAATTCACCATC+TGG 0.419965 tig0021743:-7770 None:intergenic
AGTTGTGTCTGTGTTTATGT+TGG 0.421385 tig0021743:-7153 None:intergenic
GAAGCTTCAACCGATAGTTC+GGG 0.423173 tig0021743:-4606 None:intergenic
ACATATTTCATTGTTCTTGT+GGG 0.424032 tig0021743:-7306 None:intergenic
TGTTTAGTCTGTTCCGAGAA+AGG 0.424635 tig0021743:-5521 None:intergenic
GATTCCAGAAGACTTTCCTT+TGG 0.426336 tig0021743:+3114 Msa1393500:CDS
TTGTTCTTGTGGGGACTGCT+TGG 0.427164 tig0021743:-7296 None:intergenic
CATCAACTTCAGGAGGCAAT+AGG 0.428681 tig0021743:-2611 None:intergenic
TGTATCTGCTATATACAATC+TGG 0.430477 tig0021743:-5468 None:intergenic
TGCACGCTTTCTTCTACCAT+TGG 0.430540 tig0021743:-5279 None:intergenic
TCTTCAGCTGGTGCCAAAGT+TGG 0.431339 tig0021743:+5728 Msa1393500:CDS
TGTAATGAAAAGGAAGTGTC+AGG 0.431539 tig0021743:+7326 Msa1393500:CDS
ACTGCATCTCTGTGACAGTT+TGG 0.432384 tig0021743:-7602 None:intergenic
GTCTGTGTCCATTGCTGATA+CGG 0.433476 tig0021743:+2521 Msa1393500:five_prime_UTR
TGTGCATATTTAGCTAAAAT+GGG 0.433604 tig0021743:+8839 Msa1393500:three_prime_UTR
CCCTGTTATAGCAGCCCTAA+AGG 0.443432 tig0021743:-5144 None:intergenic
TTTGGATAGTGCAGACTGTA+AGG 0.443762 tig0021743:+7538 Msa1393500:CDS
TCTCATATCAGTTGGCAATT+GGG 0.444054 tig0021743:-6012 None:intergenic
TATTGCCTCCTGAAGTTGAT+GGG 0.446085 tig0021743:+2613 Msa1393500:CDS
GAAGAAAGCGTGCATGGGAT+AGG 0.446500 tig0021743:+5288 Msa1393500:CDS
TGCAAAATTGAATCTGATAT+GGG 0.448382 tig0021743:+2876 Msa1393500:CDS
CTATTGCCTCCTGAAGTTGA+TGG 0.451632 tig0021743:+2612 Msa1393500:CDS
ATGAAGAGAGTTTCTGATGA+TGG 0.452594 tig0021743:+5011 Msa1393500:CDS
TTCTTTGCCTTCAGAGCTGA+AGG 0.455017 tig0021743:-5197 None:intergenic
TTCTTGTGGGGACTGCTTGG+AGG 0.456656 tig0021743:-7293 None:intergenic
CAAAATAATCCGTCAGCAAA+AGG 0.457161 tig0021743:+5542 Msa1393500:CDS
CAATGGTTGACCGAAACAAA+TGG 0.457635 tig0021743:+2565 Msa1393500:exon
GATTCCGAGAAAGAATATTC+GGG 0.460757 tig0021743:+8760 Msa1393500:three_prime_UTR
AAAACTTGTTGAGGATGAAA+TGG 0.461442 tig0021743:-8596 None:intergenic
GCAGTAAATGGTGCTGAAGT+AGG 0.462919 tig0021743:+7869 Msa1393500:CDS
GATTTAAAGGAAAGTGATAA+TGG 0.463962 tig0021743:+2783 Msa1393500:CDS
GTGTCCGACATTAACTTACA+TGG 0.464150 tig0021743:-2651 None:intergenic
TTTAAAACATTCTCCAACAA+AGG 0.466040 tig0021743:+4851 Msa1393500:CDS
AGAGGATGTCAAACCTTTCT+CGG 0.466789 tig0021743:+5508 Msa1393500:CDS
AGAGCGAGCTCCCGAATGTC+AGG 0.468530 tig0021743:+5427 Msa1393500:CDS
GAACACAGCAAATGAAAGTC+AGG 0.475761 tig0021743:+5847 Msa1393500:CDS
CTTCATCTTGGTTTATCGGT+GGG 0.477646 tig0021743:+2900 Msa1393500:CDS
GAAAAGAAAGAAAACATGAC+TGG 0.479402 tig0021743:+4969 Msa1393500:CDS
GAGAGCTTCAAAACCTGAAA+AGG 0.481141 tig0021743:+5346 Msa1393500:CDS
ATATAATGAATATAGTTAAA+GGG 0.482474 tig0021743:+4889 Msa1393500:CDS
AACAGATCCCCATCAACTTC+AGG 0.482991 tig0021743:-2621 None:intergenic
CAATGAAATATGTAATGAAA+AGG 0.483896 tig0021743:+7316 Msa1393500:CDS
GACAGCTGTGGTTGTCTCAA+TGG 0.485598 tig0021743:+2548 Msa1393500:exon
ATTCACTGTTAGTATTATCT+GGG 0.485781 tig0021743:-2482 None:intergenic
CCTCTTTCTACCAGCCACTC+TGG 0.486616 tig0021743:-3328 None:intergenic
CCAGAAGACTTTCCTTTGGA+AGG 0.487768 tig0021743:+3118 Msa1393500:CDS
GGTGAGCAAGAGGCACCTCC+TGG 0.488201 tig0021743:-7581 None:intergenic
TGATAAAAGAAAATGGGCCT+TGG 0.488612 tig0021743:+5790 Msa1393500:CDS
GAAAGGTGATAAAAGAAAAT+GGG 0.488760 tig0021743:+5784 Msa1393500:CDS
GTGCTACATTGCGAACAATA+GGG 0.489739 tig0021743:+8734 Msa1393500:three_prime_UTR
GTCCAGAAGAAACGGAAGGC+TGG 0.493839 tig0021743:-7658 None:intergenic
GTTACTTGCTTGGATGGTGA+TGG 0.499617 tig0021743:+689 Msa1393500:five_prime_UTR
GTGCAGTGTGATTCATTCGC+TGG 0.500096 tig0021743:+8796 Msa1393500:three_prime_UTR
AATTCCTGTATCCGTGAGGC+AGG 0.501209 tig0021743:+6064 Msa1393500:CDS
TCTAGTTCAAGTATATCATC+AGG 0.502187 tig0021743:-7350 None:intergenic
CGAGAATAATGATTGCCATA+AGG 0.502487 tig0021743:+7823 Msa1393500:CDS
GATGGCTGCAAAATTCGAAA+TGG 0.503330 tig0021743:+707 Msa1393500:five_prime_UTR
AGATGCTATTAATATTGAAA+AGG 0.504588 tig0021743:+7046 Msa1393500:CDS
CAGTAAATGGTGCTGAAGTA+GGG 0.505019 tig0021743:+7870 Msa1393500:CDS
TAAAAGAAAATGGGCCTTGG+AGG 0.505512 tig0021743:+5793 Msa1393500:CDS
TTATAAGTGGTTCTTTATCA+GGG 0.505721 tig0021743:-7739 None:intergenic
TCTTCAATAAGCGTTCCGTC+AGG 0.505803 tig0021743:-6971 None:intergenic
CTTAATTGTACTTTACCAGC+TGG 0.506554 tig0021743:-5677 None:intergenic
TAGGCAGTTACTTGCTTGGA+TGG 0.508085 tig0021743:+683 Msa1393500:five_prime_UTR
TTCTGATTGATCAGTTTGCA+CGG 0.508147 tig0021743:-7195 None:intergenic
AGTATCAAATCCCACACAAA+AGG 0.513757 tig0021743:-1331 None:intergenic
TCTTCATCTTGGTTTATCGG+TGG 0.519376 tig0021743:+2899 Msa1393500:CDS
AAGATTGTACGTGGTCCAGC+TGG 0.523778 tig0021743:+5662 Msa1393500:CDS
TTCAACCGATAGTTCGGGGT+TGG 0.525228 tig0021743:-4601 None:intergenic
GCACGAAGGATTTAGAAGTT+GGG 0.526215 tig0021743:-2755 None:intergenic
ATCTTATACATTCCTCCTCA+TGG 0.526342 tig0021743:+8887 Msa1393500:three_prime_UTR
AATGGACACAGACACTATTC+CGG 0.526465 tig0021743:-2511 None:intergenic
TAATGTATAACACTAATCCT+TGG 0.527038 tig0021743:+645 Msa1393500:five_prime_UTR
CAAGTCCCTTGGAAAGCTTA+CGG 0.528945 tig0021743:-4917 None:intergenic
GTTATCCCCTTCAGCTCTGA+AGG 0.529362 tig0021743:+5190 Msa1393500:CDS
ATTGGACTCATCAAATAACT+TGG 0.529746 tig0021743:-2838 None:intergenic
AAGAAAGCGTGCATGGGATA+GGG 0.529759 tig0021743:+5289 Msa1393500:CDS
AAGAAAACATGACTGGGTTG+AGG 0.531917 tig0021743:+4976 Msa1393500:CDS
TGGTAGGAGTCCAGAAGAAA+CGG 0.532812 tig0021743:-7666 None:intergenic
TGAGGATGAAATGGTGATAT+GGG 0.533092 tig0021743:-8587 None:intergenic
TTCAGCCGATAGTTCGGGGT+TGG 0.533439 tig0021743:-4730 None:intergenic
GATGACAGTGCCAGAGTGGC+TGG 0.534895 tig0021743:+3318 Msa1393500:CDS
GTTAGGGATCTTTGTAACAC+TGG 0.536237 tig0021743:-7441 None:intergenic
AGTCTTCTGGAATCGAGCAC+GGG 0.536505 tig0021743:-3105 None:intergenic
CCTGATATGCTCCTTGATGT+AGG 0.537367 tig0021743:-8376 None:intergenic
AGTTCTTCTCCCTTCATGAT+CGG 0.538187 tig0021743:-2714 None:intergenic
CATATTTCATTGTTCTTGTG+GGG 0.541455 tig0021743:-7305 None:intergenic
CCAGAGTGGCTGGTAGAAAG+AGG 0.542880 tig0021743:+3328 Msa1393500:CDS
CTTAAATCTGATTCTGTGAA+AGG 0.542950 tig0021743:+5767 Msa1393500:CDS
CTTCTTGGTACAGCATACAT+AGG 0.544314 tig0021743:-9026 None:intergenic
AGATGCCAACCCCGAACTAT+CGG 0.544658 tig0021743:+4725 Msa1393500:CDS
ATGGTAGAAGAAAGCGTGCA+TGG 0.547779 tig0021743:+5282 Msa1393500:CDS
AAACTCGCGGAGCAGTATGT+TGG 0.547918 tig0021743:+8534 Msa1393500:CDS
AGAAAACATGACTGGGTTGA+GGG 0.548051 tig0021743:+4977 Msa1393500:CDS
ATTATCTGGGTTAAATTCCA+GGG 0.551587 tig0021743:-2469 None:intergenic
TGATCACGGCTGAACAGTAC+AGG 0.553038 tig0021743:+8418 Msa1393500:CDS
TGCTATTAATATTGAAAAGG+AGG 0.553296 tig0021743:+7049 Msa1393500:CDS
TCTGCAGTTCTACGAATGAT+TGG 0.555363 tig0021743:-7005 None:intergenic
GCTAATTTCCTCATAAAGGA+AGG 0.555452 tig0021743:+8498 Msa1393500:CDS
ACTAGAATCTCATCCCGAGC+TGG 0.555715 tig0021743:+7367 Msa1393500:CDS
CTTTGCCTTCAGAGCTGAAG+GGG 0.557451 tig0021743:-5195 None:intergenic
TCTGAAAACAATGAAGTGCC+AGG 0.557715 tig0021743:+7563 Msa1393500:CDS
AGATGCCAACCCCGAACTAT+CGG 0.558854 tig0021743:+4596 Msa1393500:CDS
TACAAAATGATGAAATGCCA+AGG 0.563062 tig0021743:-662 None:intergenic
GGACACAAATAATCAGCTGC+AGG 0.564443 tig0021743:+2668 Msa1393500:CDS
AAAGATGAATTGCAATGGGA+AGG 0.570625 tig0021743:+9058 Msa1393500:three_prime_UTR
GATAAATTACGTACAAGCAA+AGG 0.571388 tig0021743:-5899 None:intergenic
TTGGATAGTGCAGACTGTAA+GGG 0.571843 tig0021743:+7539 Msa1393500:CDS
TCAATAAGCGTTCCGTCAGG+CGG 0.572262 tig0021743:-6968 None:intergenic
AACTGTGTCACCGATCATGA+AGG 0.573404 tig0021743:+2704 Msa1393500:CDS
AAGTCTTCTGGAATCGAGCA+CGG 0.575721 tig0021743:-3106 None:intergenic
TCTGTGTCCATTGCTGATAC+GGG 0.582687 tig0021743:+2522 Msa1393500:five_prime_UTR
ATCAGGCCATTGTGCAAGAG+TGG 0.583842 tig0021743:+8393 Msa1393500:CDS
GGTTTGACATCCTCTTTCCG+TGG 0.585428 tig0021743:-5500 None:intergenic
ACTAGTCCAAAATCTAAGGA+AGG 0.586333 tig0021743:+5046 Msa1393500:CDS
TCTGATTGATCAGTTTGCAC+GGG 0.587189 tig0021743:-7194 None:intergenic
TTGGAAGATGATGATTACAT+AGG 0.587979 tig0021743:+7416 Msa1393500:CDS
TCTGGACTCCTACCATGTGA+AGG 0.590540 tig0021743:+7674 Msa1393500:CDS
GCAGTTTCTAAAGAAACAGA+TGG 0.591651 tig0021743:+2426 Msa1393500:five_prime_UTR
GTTTGACATCCTCTTTCCGT+GGG 0.592195 tig0021743:-5499 None:intergenic
TCACAGAGATGCAGTCCAGA+AGG 0.593323 tig0021743:+7610 Msa1393500:CDS
AACACCGGTCTCATATCAGT+TGG 0.595062 tig0021743:-6020 None:intergenic
GCAAGTTCGTATAAAAGTTG+AGG 0.595408 tig0021743:+4569 Msa1393500:CDS
GCAAGTTCGTATAAAAGTTG+AGG 0.595408 tig0021743:+4698 Msa1393500:CDS
GTGACAGTTTGGTGAGCAAG+AGG 0.595565 tig0021743:-7591 None:intergenic
GCCAATCTCTGCATTAATGG+TGG 0.596293 tig0021743:-7636 None:intergenic
ATTAGTGTCAGCAAGTCCCT+TGG 0.597733 tig0021743:-4928 None:intergenic
ATTGGCAGATTCTATAGGGG+TGG 0.597940 tig0021743:+8925 Msa1393500:three_prime_UTR
ATTGCCTCCTGAAGTTGATG+GGG 0.598756 tig0021743:+2614 Msa1393500:CDS
TGTATTGGCAGATTCTATAG+GGG 0.599051 tig0021743:+8922 Msa1393500:three_prime_UTR
GACGAACCGTAAGCTTTCCA+AGG 0.600753 tig0021743:+4911 Msa1393500:CDS
TGGGAGGTACTCAAAGTGAA+AGG 0.600800 tig0021743:+8858 Msa1393500:three_prime_UTR
TGTCTCTCCCGTATCAGCAA+TGG 0.601856 tig0021743:-2529 None:intergenic
AAGAAGTCAATGTTGCAGAA+AGG 0.602008 tig0021743:+5215 Msa1393500:CDS
ACAGTACGTGGTTATGCCCA+AGG 0.604432 tig0021743:+1367 Msa1393500:five_prime_UTR
ACTAACAGTGAATGTCATGC+CGG 0.606011 tig0021743:+2492 Msa1393500:five_prime_UTR
TGGATAGTGCAGACTGTAAG+GGG 0.606342 tig0021743:+7540 Msa1393500:CDS
AATTAAGCAGTCACTCAGGA+GGG 0.606780 tig0021743:+5693 Msa1393500:CDS
AACTGATATGAGACCGGTGT+TGG 0.607099 tig0021743:+6022 Msa1393500:CDS
ATTACAATCATTACATGGAG+AGG 0.607432 tig0021743:+7781 Msa1393500:CDS
CAACAGCACCTTCACATGGT+AGG 0.607744 tig0021743:-7682 None:intergenic
TTACAATCATTACATGGAGA+GGG 0.608719 tig0021743:+7782 Msa1393500:CDS
TAGAACTGCAGACACAGAGT+TGG 0.609167 tig0021743:+7016 Msa1393500:CDS
TGGCGACAAGGTGCCAACAC+CGG 0.609390 tig0021743:-6035 None:intergenic
TGTACTTCTAGTCGATAATG+TGG 0.609798 tig0021743:+3048 Msa1393500:intron
TGGTAGAAGAAAGCGTGCAT+GGG 0.610649 tig0021743:+5283 Msa1393500:CDS
TCTTTGCCTTCAGAGCTGAA+GGG 0.611101 tig0021743:-5196 None:intergenic
CAATTAAGCAGTCACTCAGG+AGG 0.619637 tig0021743:+5692 Msa1393500:CDS
TTGGTTCCATCAAAGCTACT+CGG 0.620668 tig0021743:-2819 None:intergenic
CTTTAAATCGCTATGCACGA+AGG 0.621604 tig0021743:-2769 None:intergenic
ATTGCCAACTGATATGAGAC+CGG 0.622238 tig0021743:+6016 Msa1393500:CDS
GTACAATTAAGCAGTCACTC+AGG 0.623035 tig0021743:+5689 Msa1393500:CDS
GTGCAAGAGTGGTGTGATCA+CGG 0.623081 tig0021743:+8404 Msa1393500:CDS
TAACCCAAGAAAACTTGTTG+AGG 0.623685 tig0021743:-8605 None:intergenic
TCAACGCTATTTGAACTGCA+GGG 0.626482 tig0021743:-7244 None:intergenic
TGGTGCCAAAGTTGGCACAA+AGG 0.626604 tig0021743:+5736 Msa1393500:CDS
GACACAGCTGTACCGCCTGA+CGG 0.626722 tig0021743:+6956 Msa1393500:intron
ATTAAGCAGTCACTCAGGAG+GGG 0.627001 tig0021743:+5694 Msa1393500:CDS
CAGATGGCAATTCAATAAAG+GGG 0.633431 tig0021743:+2442 Msa1393500:five_prime_UTR
AAAAGAAAGAAAACATGACT+GGG 0.634095 tig0021743:+4970 Msa1393500:CDS
AGTTTATAGAGGATTTGTTG+CGG 0.634669 tig0021743:-5085 None:intergenic
TGAGCCATGTAAGTTAATGT+CGG 0.634802 tig0021743:+2647 Msa1393500:CDS
CAAGACTATTAAAGCAACAG+AGG 0.636817 tig0021743:+5586 Msa1393500:CDS
CCTTTAGGGCTGCTATAACA+GGG 0.637214 tig0021743:+5144 Msa1393500:CDS
ACTGTGTCACCGATCATGAA+GGG 0.639740 tig0021743:+2705 Msa1393500:CDS
GGTGAATTACAATCATTACA+TGG 0.640283 tig0021743:+7776 Msa1393500:CDS
AGTTTGCACGGGTGATGATG+AGG 0.641447 tig0021743:-7183 None:intergenic
TGCACGGGTGATGATGAGGT+TGG 0.643445 tig0021743:-7179 None:intergenic
AATGGTGCATTACCTTCCAA+AGG 0.646787 tig0021743:-3130 None:intergenic
TGTGTGGGATTTGATACTGA+AGG 0.648912 tig0021743:+1336 Msa1393500:five_prime_UTR
GTAATGAAAAGGAAGTGTCA+GGG 0.649835 tig0021743:+7327 Msa1393500:CDS
ATTCCAGAAACAAGTGAGAG+AGG 0.650251 tig0021743:+2588 Msa1393500:CDS
GCTACAGCTTACCTGCCTCA+CGG 0.652429 tig0021743:-6075 None:intergenic
GGATCAACAGCACCTTCACA+TGG 0.653448 tig0021743:-7686 None:intergenic
ATCACACCACTCTTGCACAA+TGG 0.654773 tig0021743:-8399 None:intergenic
TCACGGCTGAACAGTACAGG+TGG 0.655166 tig0021743:+8421 Msa1393500:CDS
AAGCTTCAGCCGATAGTTCG+GGG 0.655200 tig0021743:-4734 None:intergenic
AGATCCCCATCAACTTCAGG+AGG 0.655605 tig0021743:-2618 None:intergenic
ACAGGTAGAAGCCTACATCA+AGG 0.658247 tig0021743:+8365 Msa1393500:intron
CACGGCTGAACAGTACAGGT+GGG 0.658297 tig0021743:+8422 Msa1393500:CDS
AGATGGCAATTCAATAAAGG+GGG 0.669533 tig0021743:+2443 Msa1393500:five_prime_UTR
AAGTACGTGAAAATCTAACA+AGG 0.671379 tig0021743:+5240 Msa1393500:CDS
ACGAACCGTAAGCTTTCCAA+GGG 0.671646 tig0021743:+4912 Msa1393500:CDS
ATTACATGGAGAGGGCAAGA+CGG 0.675282 tig0021743:+7790 Msa1393500:CDS
AGGAGTCCAGAAGAAACGGA+AGG 0.678183 tig0021743:-7662 None:intergenic
AAGCTTCAACCGATAGTTCG+GGG 0.688218 tig0021743:-4605 None:intergenic
AAACTACAGAGGCCATGAGG+AGG 0.696612 tig0021743:-8899 None:intergenic
TTGTGATGACAGTGCCAGAG+TGG 0.696980 tig0021743:+3314 Msa1393500:CDS
TGAGAAAGTAAAGAAACTCG+CGG 0.702852 tig0021743:+8521 Msa1393500:CDS
ACAAAACTACAGAGGCCATG+AGG 0.703929 tig0021743:-8902 None:intergenic
ATAAAATTCCTGTATCCGTG+AGG 0.706166 tig0021743:+6060 Msa1393500:CDS
AATGTTTAGAGCTAATGACT+CGG 0.708135 tig0021743:+4659 Msa1393500:CDS
AAGGTACATCTGACAGTACG+TGG 0.709384 tig0021743:+1355 Msa1393500:five_prime_UTR
AATGTTTAGAGCTAATGACT+CGG 0.710307 tig0021743:+4788 Msa1393500:CDS
GCATATTTAGCTAAAATGGG+AGG 0.715779 tig0021743:+8842 Msa1393500:three_prime_UTR
CTGCCAATACAAAACTACAG+AGG 0.729813 tig0021743:-8910 None:intergenic
AAAGTAGATAAGATTGTACG+TGG 0.730669 tig0021743:+5653 Msa1393500:CDS
GAAAACAATGAAGTGCCAGG+AGG 0.758156 tig0021743:+7566 Msa1393500:CDS
TGATACGGGAGAGACAGCTG+TGG 0.814386 tig0021743:+2536 Msa1393500:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATTATTGTATATAAC+CGG - tig0021743:1997-2016 None:intergenic 10.0%
!!! ATTTTATTAATGACATTATA+AGG - tig0021743:3264-3283 None:intergenic 10.0%
!! TTTCATAACAATAAAATAAA+TGG + tig0021743:3529-3548 Msa1393500:intron 10.0%
!! TAAAATAAAGTATGATTAAT+TGG - tig0021743:3971-3990 None:intergenic 10.0%
!!! AATTAATCATACTTTATTTT+AGG + tig0021743:3970-3989 Msa1393500:intron 10.0%
!! ATATAATGAATATAGTTAAA+GGG + tig0021743:4889-4908 Msa1393500:CDS 10.0%
!! AATTTATTGCTTTATATCTA+TGG + tig0021743:876-895 Msa1393500:intron 15.0%
!! CATTTGTATTATTTACTATT+TGG + tig0021743:1600-1619 Msa1393500:intron 15.0%
!!! ATTTTGCTTATATTTTGATA+CGG - tig0021743:2206-2225 None:intergenic 15.0%
!!! TTTTAAATGAAATTAACAAG+AGG - tig0021743:2272-2291 None:intergenic 15.0%
!!! ATTTTGCTTTCTTTATTTTT+AGG + tig0021743:3169-3188 Msa1393500:intron 15.0%
!!! AATCTAATATCTTTTTAAGA+TGG + tig0021743:3383-3402 Msa1393500:intron 15.0%
!! TTAAAAGTTAACTTATCAAT+TGG + tig0021743:3600-3619 Msa1393500:intron 15.0%
!!! CTAATTTTTTTTATTCTAGA+CGG + tig0021743:3824-3843 Msa1393500:intron 15.0%
!!! ATGATATTTTATGCTAATAA+CGG - tig0021743:4236-4255 None:intergenic 15.0%
!! AAATTTATTTCAACGAAATA+TGG - tig0021743:4465-4484 None:intergenic 15.0%
!! TGTAATATCAAGTAAAAAAT+TGG - tig0021743:4542-4561 None:intergenic 15.0%
!! GATATAATGAATATAGTTAA+AGG + tig0021743:4888-4907 Msa1393500:CDS 15.0%
!!! AATTTTAGAGTATTATAACA+TGG - tig0021743:6466-6485 None:intergenic 15.0%
!! TCTTTACAAAAATTTGAAAA+TGG + tig0021743:8174-8193 Msa1393500:intron 15.0%
!! CTTTACAAAAATTTGAAAAT+GGG + tig0021743:8175-8194 Msa1393500:intron 15.0%
!! ATTAAAAGTAAAATAGACAA+TGG + tig0021743:8224-8243 Msa1393500:intron 15.0%
!! TTATTATGAACTTATGATCA+AGG - tig0021743:983-1002 None:intergenic 20.0%
!! AATAAACAAACACTAATAGA+TGG + tig0021743:998-1017 Msa1393500:intron 20.0%
!!! TGTTTTTTTACCAACTTTTA+TGG + tig0021743:1215-1234 Msa1393500:intron 20.0%
!!! GTTTTTTTACCAACTTTTAT+GGG + tig0021743:1216-1235 Msa1393500:intron 20.0%
!! CCTTATGATAATTTCATTAA+CGG - tig0021743:1254-1273 None:intergenic 20.0%
!! ACAACATTTATATCATAAAC+CGG + tig0021743:1518-1537 Msa1393500:intron 20.0%
!! ATATATGCATGTTAACAAAT+AGG - tig0021743:1671-1690 None:intergenic 20.0%
!!! TCTAAGTTTTTTATTCAGTA+TGG + tig0021743:1759-1778 Msa1393500:intron 20.0%
!!! CTAAGTTTTTTATTCAGTAT+GGG + tig0021743:1760-1779 Msa1393500:intron 20.0%
!! GTCTCTTATATAAAAAAATC+CGG + tig0021743:1975-1994 Msa1393500:intron 20.0%
!! ACAAGAAACTATTTAATATG+TGG + tig0021743:2031-2050 Msa1393500:intron 20.0%
!!! TTTTGCTTATATTTTGATAC+GGG - tig0021743:2205-2224 None:intergenic 20.0%
!!! TTTTAAGCAATTAAATGAGA+TGG - tig0021743:2322-2341 None:intergenic 20.0%
!! GTCATTAATAAAATGTTCTT+AGG + tig0021743:3270-3289 Msa1393500:intron 20.0%
!!! AATTTTATTACATGAGAAGT+AGG + tig0021743:3476-3495 Msa1393500:intron 20.0%
!!! ATTTTATTACATGAGAAGTA+GGG + tig0021743:3477-3496 Msa1393500:intron 20.0%
!!! CGTCTAGAATAAAAAAAATT+AGG - tig0021743:3826-3845 None:intergenic 20.0%
!! AATAAAGTATGATTAATTGG+AGG - tig0021743:3968-3987 None:intergenic 20.0%
!! GAATAATATATACATTTCTG+TGG - tig0021743:4128-4147 None:intergenic 20.0%
!! TAAACCCAATTCTTATATAT+AGG + tig0021743:4164-4183 Msa1393500:intron 20.0%
!! AAACCCAATTCTTATATATA+GGG + tig0021743:4165-4184 Msa1393500:intron 20.0%
!! TTTCGTTGAAATAAATTTGT+TGG + tig0021743:4467-4486 Msa1393500:intron 20.0%
!! AATATCAAGTAAAAAATTGG+AGG - tig0021743:4539-4558 None:intergenic 20.0%
!!! TTATTTACAAGTTCAGTTTT+AGG - tig0021743:5170-5189 None:intergenic 20.0%
!!! AATCTAACAAGGAAAATTTT+TGG + tig0021743:5251-5270 Msa1393500:CDS 20.0%
!!! ATCTAACAAGGAAAATTTTT+GGG + tig0021743:5252-5271 Msa1393500:CDS 20.0%
!! AATATAAAATCACCCTAATT+TGG + tig0021743:6376-6395 Msa1393500:intron 20.0%
!! ATATAAAATCACCCTAATTT+GGG + tig0021743:6377-6396 Msa1393500:intron 20.0%
!!! AAACTAATACTCTTTTTATG+AGG - tig0021743:6829-6848 None:intergenic 20.0%
!! AGATGCTATTAATATTGAAA+AGG + tig0021743:7046-7065 Msa1393500:CDS 20.0%
!! CAATGAAATATGTAATGAAA+AGG + tig0021743:7316-7335 Msa1393500:CDS 20.0%
!! TCAGAATTTGAAGATTTATA+CGG + tig0021743:7716-7735 Msa1393500:CDS 20.0%
!!! TCAACTTTTTCTATTTTGTT+GGG - tig0021743:8565-8584 None:intergenic 20.0%
!!! ATCAACTTTTTCTATTTTGT+TGG - tig0021743:8566-8585 None:intergenic 20.0%
!!! ATCTTTTTTGTTTATCTTCT+TGG - tig0021743:9044-9063 None:intergenic 20.0%
! TAATGTATAACACTAATCCT+TGG + tig0021743:645-664 Msa1393500:five_prime_UTR 25.0%
!!! AATATGTCTTTGAGTTGATT+GGG + tig0021743:850-869 Msa1393500:intron 25.0%
! CCGTTAATGAAATTATCATA+AGG + tig0021743:1251-1270 Msa1393500:intron 25.0%
!!! GATCGATTAAATTTTTTTGC+AGG - tig0021743:1494-1513 None:intergenic 25.0%
! ACATTGTTACTCTTTATTAC+CGG - tig0021743:1540-1559 None:intergenic 25.0%
! CATGCATATATAGTTCATAT+TGG + tig0021743:1680-1699 Msa1393500:intron 25.0%
!!! TTTGCTTATATTTTGATACG+GGG - tig0021743:2204-2223 None:intergenic 25.0%
! CAAAACAAGATACAATATAC+AGG - tig0021743:2359-2378 None:intergenic 25.0%
! GTCCTATAACTATTCTAATT+CGG + tig0021743:2378-2397 Msa1393500:intron 25.0%
! TCCTATAACTATTCTAATTC+GGG + tig0021743:2379-2398 Msa1393500:intron 25.0%
! ATTCACTGTTAGTATTATCT+GGG - tig0021743:2485-2504 None:intergenic 25.0%
! GATTTAAAGGAAAGTGATAA+TGG + tig0021743:2783-2802 Msa1393500:CDS 25.0%
!! ATATCAGATTCAATTTTGCA+TGG - tig0021743:2876-2895 None:intergenic 25.0%
! ATGCAAAATTGAATCTGATA+TGG + tig0021743:2875-2894 Msa1393500:CDS 25.0%
! TGCAAAATTGAATCTGATAT+GGG + tig0021743:2876-2895 Msa1393500:CDS 25.0%
!!! TGTTTTAGAAGCTAACAAAA+AGG - tig0021743:2962-2981 None:intergenic 25.0%
!! TAAGTTAACTTTTAAGCCTT+TGG - tig0021743:3595-3614 None:intergenic 25.0%
! GTAATAACCTTCAATAAATG+AGG - tig0021743:3695-3714 None:intergenic 25.0%
! TAAGCTTATTGCATTCATAT+AGG - tig0021743:3777-3796 None:intergenic 25.0%
!!! TTTTTTTTATTCTAGACGGA+AGG + tig0021743:3828-3847 Msa1393500:intron 25.0%
!! GTTAATTAAGAGTTGATTGT+GGG - tig0021743:3915-3934 None:intergenic 25.0%
!! TGTTAATTAAGAGTTGATTG+TGG - tig0021743:3916-3935 None:intergenic 25.0%
! ACAATCAACTCTTAATTAAC+AGG + tig0021743:3915-3934 Msa1393500:intron 25.0%
!! ATGGAAAATCTTTTGGATTA+AGG - tig0021743:4007-4026 None:intergenic 25.0%
!! AAGTACTATGGAAAATCTTT+TGG - tig0021743:4014-4033 None:intergenic 25.0%
!! TATTGGTAACTGTTAAGAAT+AGG - tig0021743:4037-4056 None:intergenic 25.0%
!! AAACTGGAATTAGTTGATAT+TGG - tig0021743:4054-4073 None:intergenic 25.0%
! AACCCAATTCTTATATATAG+GGG + tig0021743:4166-4185 Msa1393500:intron 25.0%
!!! GTTGGAGAATGTTTTAAAAT+GGG - tig0021743:4849-4868 None:intergenic 25.0%
!!! TGTTGGAGAATGTTTTAAAA+TGG - tig0021743:4850-4869 None:intergenic 25.0%
!! TTTAAAACATTCTCCAACAA+AGG + tig0021743:4851-4870 Msa1393500:CDS 25.0%
! AAAAGAAAGAAAACATGACT+GGG + tig0021743:4970-4989 Msa1393500:CDS 25.0%
!! TAATTTCCTTCCTTAGATTT+TGG - tig0021743:5055-5074 None:intergenic 25.0%
!! CGAGAAGATTTTTATCAAAA+TGG - tig0021743:5121-5140 None:intergenic 25.0%
! ATATACAATCTGGAAAGAAT+TGG - tig0021743:5461-5480 None:intergenic 25.0%
! TGAAAGGTGATAAAAGAAAA+TGG + tig0021743:5783-5802 Msa1393500:CDS 25.0%
! GAAAGGTGATAAAAGAAAAT+GGG + tig0021743:5784-5803 Msa1393500:CDS 25.0%
!!! TGTTTTATTACCTTTGTTGT+TGG + tig0021743:5943-5962 Msa1393500:intron 25.0%
!!! TTTGCAACAAAAAAAGTGTT+TGG - tig0021743:6170-6189 None:intergenic 25.0%
!!! TTTTTGAGTTACCCAAATTA+GGG - tig0021743:6391-6410 None:intergenic 25.0%
!!! TTTTTTGAGTTACCCAAATT+AGG - tig0021743:6392-6411 None:intergenic 25.0%
! GGTAACTCAAAAAATGTATT+GGG + tig0021743:6398-6417 Msa1393500:intron 25.0%
! GTAACTCAAAAAATGTATTG+GGG + tig0021743:6399-6418 Msa1393500:intron 25.0%
! TAACTCAAAAAATGTATTGG+GGG + tig0021743:6400-6419 Msa1393500:intron 25.0%
! TGCTATTAATATTGAAAAGG+AGG + tig0021743:7049-7068 Msa1393500:CDS 25.0%
! ACATATTTCATTGTTCTTGT+GGG - tig0021743:7309-7328 None:intergenic 25.0%
! TACATATTTCATTGTTCTTG+TGG - tig0021743:7310-7329 None:intergenic 25.0%
! GAAGAAAACAAATAATGCTT+TGG + tig0021743:7520-7539 Msa1393500:CDS 25.0%
! TTATAAGTGGTTCTTTATCA+GGG - tig0021743:7742-7761 None:intergenic 25.0%
! TTTATAAGTGGTTCTTTATC+AGG - tig0021743:7743-7762 None:intergenic 25.0%
!!! TCTGGAAACTTTTTTATAAG+TGG - tig0021743:7755-7774 None:intergenic 25.0%
! CTTATAAAAAAGTTTCCAGA+TGG + tig0021743:7755-7774 Msa1393500:CDS 25.0%
!!! ATTTTCATTGTTTGACTTCT+GGG - tig0021743:8008-8027 None:intergenic 25.0%
!! AGAAGGTATATTGGATAATT+AGG + tig0021743:8038-8057 Msa1393500:intron 25.0%
! TTGGATAATTAGGATATGTT+TGG + tig0021743:8048-8067 Msa1393500:intron 25.0%
! AAAAAGACCAGTACTATTTA+AGG - tig0021743:8341-8360 None:intergenic 25.0%
! TGTGCATATTTAGCTAAAAT+GGG + tig0021743:8839-8858 Msa1393500:three_prime_UTR 25.0%
! ACAAAAAAGATGAATTGCAA+TGG + tig0021743:9053-9072 Msa1393500:three_prime_UTR 25.0%
! CAAAAAAGATGAATTGCAAT+GGG + tig0021743:9054-9073 Msa1393500:three_prime_UTR 25.0%
TACAAAATGATGAAATGCCA+AGG - tig0021743:665-684 None:intergenic 30.0%
! TTGGCATTTCATCATTTTGT+AGG + tig0021743:664-683 Msa1393500:five_prime_UTR 30.0%
!! CAATATGTCTTTGAGTTGAT+TGG + tig0021743:849-868 Msa1393500:intron 30.0%
CAAAACAAAATTCTGCCAAA+TGG - tig0021743:927-946 None:intergenic 30.0%
ACTGTGTAATTAGAATGAGT+TGG - tig0021743:1137-1156 None:intergenic 30.0%
GATTACAATTGTAAGAGAGA+TGG + tig0021743:1158-1177 Msa1393500:intron 30.0%
TGACAAATTCAACTTACCTT+GGG - tig0021743:1386-1405 None:intergenic 30.0%
ATGTTTGTGCAAAACTTCAA+CGG - tig0021743:1458-1477 None:intergenic 30.0%
ATGTTAACAAATAGGACAAG+TGG - tig0021743:1663-1682 None:intergenic 30.0%
TTATTCAGTATGGGTTTCTA+AGG + tig0021743:1769-1788 Msa1393500:intron 30.0%
TATTCAGTATGGGTTTCTAA+GGG + tig0021743:1770-1789 Msa1393500:intron 30.0%
GTGGTTAACAATCAAAAGAA+AGG + tig0021743:2050-2069 Msa1393500:intron 30.0%
AGGTGACAATAATAAGATAC+AGG - tig0021743:2125-2144 None:intergenic 30.0%
AATCAAAAGGAAGTTTACCT+GGG - tig0021743:2156-2175 None:intergenic 30.0%
ATGCTCATGTTTCAATCAAA+AGG - tig0021743:2169-2188 None:intergenic 30.0%
CCTATAACTATTCTAATTCG+GGG + tig0021743:2380-2399 Msa1393500:intron 30.0%
AACAGATGGCAATTCAATAA+AGG + tig0021743:2440-2459 Msa1393500:five_prime_UTR 30.0%
ACAGATGGCAATTCAATAAA+GGG + tig0021743:2441-2460 Msa1393500:five_prime_UTR 30.0%
ATTATCTGGGTTAAATTCCA+GGG - tig0021743:2472-2491 None:intergenic 30.0%
TATTATCTGGGTTAAATTCC+AGG - tig0021743:2473-2492 None:intergenic 30.0%
CATTCACTGTTAGTATTATC+TGG - tig0021743:2486-2505 None:intergenic 30.0%
!! TTTCTGGAATCCATTTGTTT+CGG - tig0021743:2578-2597 None:intergenic 30.0%
ATTGGACTCATCAAATAACT+TGG - tig0021743:2841-2860 None:intergenic 30.0%
!!! AATTTTGCATGGACTAGTTT+TGG - tig0021743:2865-2884 None:intergenic 30.0%
ATGAACCATATTTCTCAGAA+TGG - tig0021743:3151-3170 None:intergenic 30.0%
GATTATAGTCTCTGTAAAAG+TGG - tig0021743:3507-3526 None:intergenic 30.0%
! TTGAAACTGCAGAATTTTGA+GGG + tig0021743:3552-3571 Msa1393500:intron 30.0%
TCAGAAACAAAAATGAAGGT+GGG - tig0021743:3648-3667 None:intergenic 30.0%
ATCAGAAACAAAAATGAAGG+TGG - tig0021743:3649-3668 None:intergenic 30.0%
CCTATCAGAAACAAAAATGA+AGG - tig0021743:3652-3671 None:intergenic 30.0%
!!! CCTTCATTTTTGTTTCTGAT+AGG + tig0021743:3649-3668 Msa1393500:intron 30.0%
TAACCTTCAATAAATGAGGA+GGG - tig0021743:3691-3710 None:intergenic 30.0%
ATAACCTTCAATAAATGAGG+AGG - tig0021743:3692-3711 None:intergenic 30.0%
TGCAATAAGCTTATAGTTTG+AGG + tig0021743:3784-3803 Msa1393500:intron 30.0%
! CAAAAAAAGAGTTGATTGCA+GGG - tig0021743:3886-3905 None:intergenic 30.0%
! TCAAAAAAAGAGTTGATTGC+AGG - tig0021743:3887-3906 None:intergenic 30.0%
!! GTTAAGAATAGGAAGTACTA+TGG - tig0021743:4026-4045 None:intergenic 30.0%
!! ACTTGGATCTGTTTATTTTC+TGG + tig0021743:4083-4102 Msa1393500:intron 30.0%
AGCCCCTATATATAAGAATT+GGG - tig0021743:4171-4190 None:intergenic 30.0%
AAGCCCCTATATATAAGAAT+TGG - tig0021743:4172-4191 None:intergenic 30.0%
CAAGTAAAAAATTGGAGGAA+TGG - tig0021743:4534-4553 None:intergenic 30.0%
! AATGTTTAGAGCTAATGACT+CGG + tig0021743:4659-4678 Msa1393500:CDS 30.0%
! AATGTTTAGAGCTAATGACT+CGG + tig0021743:4659-4678 Msa1393500:CDS 30.0%
GAAAAGAAAGAAAACATGAC+TGG + tig0021743:4969-4988 Msa1393500:CDS 30.0%
!! AGTTTATAGAGGATTTGTTG+CGG - tig0021743:5088-5107 None:intergenic 30.0%
CAAATCCTCTATAAACTTTG+AGG + tig0021743:5091-5110 Msa1393500:CDS 30.0%
! GTTTTCCTCAAAGTTTATAG+AGG - tig0021743:5099-5118 None:intergenic 30.0%
AAGTACGTGAAAATCTAACA+AGG + tig0021743:5240-5259 Msa1393500:CDS 30.0%
!!! AAAATTTTTGGGACATCCAA+TGG + tig0021743:5263-5282 Msa1393500:CDS 30.0%
!! TTTAAAGTTTCGACCTTTTC+AGG - tig0021743:5362-5381 None:intergenic 30.0%
TGTATCTGCTATATACAATC+TGG - tig0021743:5471-5490 None:intergenic 30.0%
TTGTCATCAACAGATTGATT+TGG - tig0021743:5569-5588 None:intergenic 30.0%
AAAGTAGATAAGATTGTACG+TGG + tig0021743:5653-5672 Msa1393500:CDS 30.0%
CTTTCACAGAATCAGATTTA+AGG - tig0021743:5769-5788 None:intergenic 30.0%
CTTAAATCTGATTCTGTGAA+AGG + tig0021743:5767-5786 Msa1393500:CDS 30.0%
! GAAGACGATGCAATTTTTAA+GGG + tig0021743:5869-5888 Msa1393500:CDS 30.0%
GATAAATTACGTACAAGCAA+AGG - tig0021743:5902-5921 None:intergenic 30.0%
!!! TTTTTTTCTCGATTGTGAGT+AGG + tig0021743:5989-6008 Msa1393500:intron 30.0%
CTATAACACATGTAACTTGA+TGG - tig0021743:6118-6137 None:intergenic 30.0%
CAAGTTACATGTGTTATAGT+TGG + tig0021743:6119-6138 Msa1393500:intron 30.0%
! ATGTCTAACTTCTATCCTTT+TGG + tig0021743:6192-6211 Msa1393500:intron 30.0%
GGGTAACTCAAAAAATGTAT+TGG + tig0021743:6397-6416 Msa1393500:intron 30.0%
! AATGTATTGGGGGATAATTT+TGG + tig0021743:6410-6429 Msa1393500:intron 30.0%
AGAACTAAAAGTAAAAGCCA+AGG - tig0021743:6699-6718 None:intergenic 30.0%
!! TTTCCTTTTCTAGAGAGTAT+AGG + tig0021743:6854-6873 Msa1393500:intron 30.0%
TTCTTAAGAGAGCAGAAATA+CGG - tig0021743:6911-6930 None:intergenic 30.0%
CATATTTCATTGTTCTTGTG+GGG - tig0021743:7308-7327 None:intergenic 30.0%
! TCTAGTTCAAGTATATCATC+AGG - tig0021743:7353-7372 None:intergenic 30.0%
!! TGGTGATTTTGAGTATGATT+TGG + tig0021743:7397-7416 Msa1393500:CDS 30.0%
TTGGAAGATGATGATTACAT+AGG + tig0021743:7416-7435 Msa1393500:CDS 30.0%
TCTTCAAATTCTGAATCAAC+TGG - tig0021743:7710-7729 None:intergenic 30.0%
AATGATTGTAATTCACCATC+TGG - tig0021743:7773-7792 None:intergenic 30.0%
GGTGAATTACAATCATTACA+TGG + tig0021743:7776-7795 Msa1393500:CDS 30.0%
ATTACAATCATTACATGGAG+AGG + tig0021743:7781-7800 Msa1393500:CDS 30.0%
TTACAATCATTACATGGAGA+GGG + tig0021743:7782-7801 Msa1393500:CDS 30.0%
! CTTCCTTCGAATATTTTCAT+CGG - tig0021743:7963-7982 None:intergenic 30.0%
!! GATTTTCATTGTTTGACTTC+TGG - tig0021743:8009-8028 None:intergenic 30.0%
TGAAAATCAAGTAGTGAAGA+AGG + tig0021743:8021-8040 Msa1393500:intron 30.0%
! AAGTAGTGAAGAAGGTATAT+TGG + tig0021743:8029-8048 Msa1393500:intron 30.0%
CAGTACTATTTAAGGAAGTA+TGG - tig0021743:8333-8352 None:intergenic 30.0%
CATACTTCCTTAAATAGTAC+TGG + tig0021743:8331-8350 Msa1393500:intron 30.0%
TGTTGCAAAAACAACTGAAA+AGG + tig0021743:8446-8465 Msa1393500:CDS 30.0%
GAATGCTAATTTCCTCATAA+AGG + tig0021743:8494-8513 Msa1393500:CDS 30.0%
!! AAAACTTGTTGAGGATGAAA+TGG - tig0021743:8599-8618 None:intergenic 30.0%
! TAGTTGTTCACCTTTTTGTT+AGG + tig0021743:8632-8651 Msa1393500:three_prime_UTR 30.0%
TAGATTTGACACCATGAAAA+TGG + tig0021743:8712-8731 Msa1393500:three_prime_UTR 30.0%
TGATTCCGAGAAAGAATATT+CGG + tig0021743:8759-8778 Msa1393500:three_prime_UTR 30.0%
CTGTGCATATTTAGCTAAAA+TGG + tig0021743:8838-8857 Msa1393500:three_prime_UTR 30.0%
! TTTGTATTGGCAGATTCTAT+AGG + tig0021743:8920-8939 Msa1393500:three_prime_UTR 30.0%
! TTGTATTGGCAGATTCTATA+GGG + tig0021743:8921-8940 Msa1393500:three_prime_UTR 30.0%
TGATCTATGGTAAGAACAAG+TGG + tig0021743:787-806 Msa1393500:intron 35.0%
! TAAGAACAAGTGGATGGATT+AGG + tig0021743:797-816 Msa1393500:intron 35.0%
!! TAGAATGAGTTGGTCATTCA+TGG - tig0021743:1127-1146 None:intergenic 35.0%
!! AATTTCATTAACGGATTCCC+TGG - tig0021743:1245-1264 None:intergenic 35.0%
AGTATCAAATCCCACACAAA+AGG - tig0021743:1334-1353 None:intergenic 35.0%
CTGACAAATTCAACTTACCT+TGG - tig0021743:1387-1406 None:intergenic 35.0%
GAATTTGTCAGTTGTTCTGT+CGG + tig0021743:1396-1415 Msa1393500:intron 35.0%
AATTTGTCAGTTGTTCTGTC+GGG + tig0021743:1397-1416 Msa1393500:intron 35.0%
ACTTCAACGGTCGTTATAAA+AGG - tig0021743:1445-1464 None:intergenic 35.0%
GTACAATACACCAAAATGGT+GGG - tig0021743:1844-1863 None:intergenic 35.0%
! CTTACCCTGTTTTACACAAA+AGG + tig0021743:1869-1888 Msa1393500:intron 35.0%
! ACAGCCTTTTGTGTAAAACA+GGG - tig0021743:1876-1895 None:intergenic 35.0%
! AACAGCCTTTTGTGTAAAAC+AGG - tig0021743:1877-1896 None:intergenic 35.0%
TATAAGAGACCCATACTGAA+GGG - tig0021743:1965-1984 None:intergenic 35.0%
ATATAAGAGACCCATACTGA+AGG - tig0021743:1966-1985 None:intergenic 35.0%
! AGTTTACCTGGGAATTTTGT+AGG - tig0021743:2145-2164 None:intergenic 35.0%
CAATCAAAAGGAAGTTTACC+TGG - tig0021743:2157-2176 None:intergenic 35.0%
TAACGACTTACACACGTATT+AGG + tig0021743:2226-2245 Msa1393500:intron 35.0%
CCCCGAATTAGAATAGTTAT+AGG - tig0021743:2383-2402 None:intergenic 35.0%
! GCAGTTTCTAAAGAAACAGA+TGG + tig0021743:2426-2445 Msa1393500:five_prime_UTR 35.0%
CAGATGGCAATTCAATAAAG+GGG + tig0021743:2442-2461 Msa1393500:five_prime_UTR 35.0%
AGATGGCAATTCAATAAAGG+GGG + tig0021743:2443-2462 Msa1393500:five_prime_UTR 35.0%
TGAGCCATGTAAGTTAATGT+CGG + tig0021743:2647-2666 Msa1393500:CDS 35.0%
TAGAAGCTAACAAAAAGGCA+GGG - tig0021743:2957-2976 None:intergenic 35.0%
TTAGAAGCTAACAAAAAGGC+AGG - tig0021743:2958-2977 None:intergenic 35.0%
TGTACTTCTAGTCGATAATG+TGG + tig0021743:3048-3067 Msa1393500:intron 35.0%
! ATGCACCATTCTGAGAAATA+TGG + tig0021743:3143-3162 Msa1393500:intron 35.0%
!!! AGAGGAAGCATTTTGATTAC+AGG + tig0021743:3346-3365 Msa1393500:CDS 35.0%
! GTTGAAACTGCAGAATTTTG+AGG + tig0021743:3551-3570 Msa1393500:intron 35.0%
! AACTTTTAAGCCTTTGGACA+GGG - tig0021743:3589-3608 None:intergenic 35.0%
! TAACTTTTAAGCCTTTGGAC+AGG - tig0021743:3590-3609 None:intergenic 35.0%
AAACAAAAATGAAGGTGGGA+GGG - tig0021743:3644-3663 None:intergenic 35.0%
TGATGGAATTATAGACAAGG+GGG - tig0021743:3736-3755 None:intergenic 35.0%
! GTGATGGAATTATAGACAAG+GGG - tig0021743:3737-3756 None:intergenic 35.0%
! CGTGATGGAATTATAGACAA+GGG - tig0021743:3738-3757 None:intergenic 35.0%
CCTTGTCTATAATTCCATCA+CGG + tig0021743:3736-3755 Msa1393500:intron 35.0%
TCCAGTTTCTAATCACTACT+TGG + tig0021743:4066-4085 Msa1393500:intron 35.0%
TCCAAGTAGTGATTAGAAAC+TGG - tig0021743:4070-4089 None:intergenic 35.0%
! GAATTGGGTTTAGAACTCTT+AGG - tig0021743:4156-4175 None:intergenic 35.0%
GAATAACCACACACTTCTAA+AGG - tig0021743:4214-4233 None:intergenic 35.0%
TATTCACAACTCATGAGACA+AGG + tig0021743:4335-4354 Msa1393500:intron 35.0%
ACTGAGTACGAAGAATATCT+AGG - tig0021743:4376-4395 None:intergenic 35.0%
! GATCTAAAATGATCGATGCA+AGG - tig0021743:4435-4454 None:intergenic 35.0%
GCAAGTTCGTATAAAAGTTG+AGG + tig0021743:4569-4588 Msa1393500:CDS 35.0%
GCAAGTTCGTATAAAAGTTG+AGG + tig0021743:4569-4588 Msa1393500:CDS 35.0%
ATGAAGAGAGTTTCTGATGA+TGG + tig0021743:5011-5030 Msa1393500:CDS 35.0%
ACTAGTCCAAAATCTAAGGA+AGG + tig0021743:5046-5065 Msa1393500:CDS 35.0%
AAAATCTTCTCGAAGCCTTT+AGG + tig0021743:5129-5148 Msa1393500:CDS 35.0%
AAATCTTCTCGAAGCCTTTA+GGG + tig0021743:5130-5149 Msa1393500:CDS 35.0%
AAGAAGTCAATGTTGCAGAA+AGG + tig0021743:5215-5234 Msa1393500:CDS 35.0%
! GGGATTGTGAAATTGAGTTT+TGG + tig0021743:5309-5328 Msa1393500:CDS 35.0%
TCTGGAAAGAATTGGATTCT+TGG - tig0021743:5453-5472 None:intergenic 35.0%
CAAAATAATCCGTCAGCAAA+AGG + tig0021743:5542-5561 Msa1393500:CDS 35.0%
CAAGACTATTAAAGCAACAG+AGG + tig0021743:5586-5605 Msa1393500:CDS 35.0%
CTTAATTGTACTTTACCAGC+TGG - tig0021743:5680-5699 None:intergenic 35.0%
TGATAAAAGAAAATGGGCCT+TGG + tig0021743:5790-5809 Msa1393500:CDS 35.0%
! GGAAGACGATGCAATTTTTA+AGG + tig0021743:5868-5887 Msa1393500:CDS 35.0%
ATATGTGACACCAACAACAA+AGG - tig0021743:5956-5975 None:intergenic 35.0%
TCTCATATCAGTTGGCAATT+GGG - tig0021743:6015-6034 None:intergenic 35.0%
! CGGATACAGGAATTTTATTG+TGG - tig0021743:6058-6077 None:intergenic 35.0%
ATAAAATTCCTGTATCCGTG+AGG + tig0021743:6060-6079 Msa1393500:CDS 35.0%
! ATGTAACTTGATGGCAGAAT+TGG - tig0021743:6109-6128 None:intergenic 35.0%
! TCTAACTTCTATCCTTTTGG+TGG + tig0021743:6195-6214 Msa1393500:intron 35.0%
AGAAAGGGATATCTATCCTA+AGG - tig0021743:6223-6242 None:intergenic 35.0%
GAAAAAAAAGGAAGGAGGAA+AGG + tig0021743:6298-6317 Msa1393500:intron 35.0%
AGGAAAGGAAGAAGTAAGAA+AGG + tig0021743:6313-6332 Msa1393500:intron 35.0%
AAGGAAGAAGTAAGAAAGGA+TGG + tig0021743:6317-6336 Msa1393500:intron 35.0%
! TATTGGGGGATAATTTTGGA+GGG + tig0021743:6414-6433 Msa1393500:intron 35.0%
TCATCAACTGATACCAACAA+TGG - tig0021743:6788-6807 None:intergenic 35.0%
! CTCTTTTTATGAGGAACTTC+AGG - tig0021743:6820-6839 None:intergenic 35.0%
! CTACCTATACTCTCTAGAAA+AGG - tig0021743:6860-6879 None:intergenic 35.0%
AGTTGTGTCTGTGTTTATGT+TGG - tig0021743:7156-7175 None:intergenic 35.0%
TTCTGATTGATCAGTTTGCA+CGG - tig0021743:7198-7217 None:intergenic 35.0%
! CAAATAGCGTTGAAAAATGC+TGG + tig0021743:7254-7273 Msa1393500:CDS 35.0%
!! TGTAATGAAAAGGAAGTGTC+AGG + tig0021743:7326-7345 Msa1393500:CDS 35.0%
!! GTAATGAAAAGGAAGTGTCA+GGG + tig0021743:7327-7346 Msa1393500:CDS 35.0%
ATCACCAAAAATATCCAGCT+CGG - tig0021743:7384-7403 None:intergenic 35.0%
!!! TCTGCTCTTCTTTTAGGTTA+GGG - tig0021743:7460-7479 None:intergenic 35.0%
! ATTCACTCTGCTCTTCTTTT+AGG - tig0021743:7466-7485 None:intergenic 35.0%
!! ATTTGTTTTCTTCAAGCTCG+TGG - tig0021743:7513-7532 None:intergenic 35.0%
CGAGAATAATGATTGCCATA+AGG + tig0021743:7823-7842 Msa1393500:CDS 35.0%
GACTTAGACAAAGCAGTAAA+TGG + tig0021743:7857-7876 Msa1393500:CDS 35.0%
CGATGAAAATATTCGAAGGA+AGG + tig0021743:7961-7980 Msa1393500:intron 35.0%
TGAAAATGGGACACAATACA+AGG + tig0021743:8188-8207 Msa1393500:intron 35.0%
!!! GTACTGGTCTTTTTTTGTAC+AGG + tig0021743:8347-8366 Msa1393500:intron 35.0%
GCTAATTTCCTCATAAAGGA+AGG + tig0021743:8498-8517 Msa1393500:CDS 35.0%
TGAGAAAGTAAAGAAACTCG+CGG + tig0021743:8521-8540 Msa1393500:CDS 35.0%
TGAGGATGAAATGGTGATAT+GGG - tig0021743:8590-8609 None:intergenic 35.0%
TTGAGGATGAAATGGTGATA+TGG - tig0021743:8591-8610 None:intergenic 35.0%
! TCATCCTCAACAAGTTTTCT+TGG + tig0021743:8601-8620 Msa1393500:three_prime_UTR 35.0%
! CATCCTCAACAAGTTTTCTT+GGG + tig0021743:8602-8621 Msa1393500:three_prime_UTR 35.0%
!! TAACCCAAGAAAACTTGTTG+AGG - tig0021743:8608-8627 None:intergenic 35.0%
GATTCCGAGAAAGAATATTC+GGG + tig0021743:8760-8779 Msa1393500:three_prime_UTR 35.0%
CTTTCCCGAATATTCTTTCT+CGG - tig0021743:8767-8786 None:intergenic 35.0%
GCATATTTAGCTAAAATGGG+AGG + tig0021743:8842-8861 Msa1393500:three_prime_UTR 35.0%
ATCTTATACATTCCTCCTCA+TGG + tig0021743:8887-8906 Msa1393500:three_prime_UTR 35.0%
! TGTATTGGCAGATTCTATAG+GGG + tig0021743:8922-8941 Msa1393500:three_prime_UTR 35.0%
AAAGATGAATTGCAATGGGA+AGG + tig0021743:9058-9077 Msa1393500:three_prime_UTR 35.0%
TTTGTAGGCAGTTACTTGCT+TGG + tig0021743:679-698 Msa1393500:five_prime_UTR 40.0%
GATGGCTGCAAAATTCGAAA+TGG + tig0021743:707-726 Msa1393500:five_prime_UTR 40.0%
!! GCAAGTGTTGAAGAAGATTC+TGG + tig0021743:734-753 Msa1393500:five_prime_UTR 40.0%
CTTGCGATTCATGTGATCTA+TGG + tig0021743:774-793 Msa1393500:five_prime_UTR 40.0%
CTATGGTAAGAACAAGTGGA+TGG + tig0021743:791-810 Msa1393500:intron 40.0%
!! ACAAGTGGATGGATTAGGTT+AGG + tig0021743:802-821 Msa1393500:intron 40.0%
CAGGAATATGATGCAAGTCA+TGG + tig0021743:1044-1063 Msa1393500:intron 40.0%
ACCCTGACTTTGTTAAAGTG+TGG + tig0021743:1101-1120 Msa1393500:intron 40.0%
GCCACACTTTAACAAAGTCA+GGG - tig0021743:1105-1124 None:intergenic 40.0%
CAGGTAAAGCAACAATCAGA+GGG - tig0021743:1292-1311 None:intergenic 40.0%
TGCTTTACCTGCAAATTGAC+AGG + tig0021743:1301-1320 Msa1393500:intron 40.0%
TGTGTGGGATTTGATACTGA+AGG + tig0021743:1336-1355 Msa1393500:five_prime_UTR 40.0%
CGTACAATACACCAAAATGG+TGG - tig0021743:1845-1864 None:intergenic 40.0%
CTGCGTACAATACACCAAAA+TGG - tig0021743:1848-1867 None:intergenic 40.0%
! TTACACAAAAGGCTGTTTCC+AGG + tig0021743:1880-1899 Msa1393500:intron 40.0%
ATAAGAGACCCATACTGAAG+GGG - tig0021743:1964-1983 None:intergenic 40.0%
TTGTCACCTACAAAATTCCC+AGG + tig0021743:2136-2155 Msa1393500:intron 40.0%
!!! CGGGGTTTATTTTAGATGTG+TGG + tig0021743:2398-2417 Msa1393500:intron 40.0%
ACTAACAGTGAATGTCATGC+CGG + tig0021743:2492-2511 Msa1393500:five_prime_UTR 40.0%
AATGGACACAGACACTATTC+CGG - tig0021743:2514-2533 None:intergenic 40.0%
CAATGGTTGACCGAAACAAA+TGG + tig0021743:2565-2584 Msa1393500:exon 40.0%
ATTCCAGAAACAAGTGAGAG+AGG + tig0021743:2588-2607 Msa1393500:CDS 40.0%
! TATTGCCTCCTGAAGTTGAT+GGG + tig0021743:2613-2632 Msa1393500:CDS 40.0%
GTGTCCGACATTAACTTACA+TGG - tig0021743:2654-2673 None:intergenic 40.0%
AGTTCTTCTCCCTTCATGAT+CGG - tig0021743:2717-2736 None:intergenic 40.0%
GCACGAAGGATTTAGAAGTT+GGG - tig0021743:2758-2777 None:intergenic 40.0%
TGCACGAAGGATTTAGAAGT+TGG - tig0021743:2759-2778 None:intergenic 40.0%
CTTTAAATCGCTATGCACGA+AGG - tig0021743:2772-2791 None:intergenic 40.0%
CTTCGTGCATAGCGATTTAA+AGG + tig0021743:2770-2789 Msa1393500:CDS 40.0%
TTGGTTCCATCAAAGCTACT+CGG - tig0021743:2822-2841 None:intergenic 40.0%
TCTGATATGGGTCTTCATCT+TGG + tig0021743:2888-2907 Msa1393500:CDS 40.0%
GGGTCTTCATCTTGGTTTAT+CGG + tig0021743:2896-2915 Msa1393500:CDS 40.0%
TCTTCATCTTGGTTTATCGG+TGG + tig0021743:2899-2918 Msa1393500:CDS 40.0%
CTTCATCTTGGTTTATCGGT+GGG + tig0021743:2900-2919 Msa1393500:CDS 40.0%
GTGTGCACTCTACAATTATG+AGG + tig0021743:3002-3021 Msa1393500:intron 40.0%
GATTCCAGAAGACTTTCCTT+TGG + tig0021743:3114-3133 Msa1393500:CDS 40.0%
AATGGTGCATTACCTTCCAA+AGG - tig0021743:3133-3152 None:intergenic 40.0%
!! TTTTTAGGCCACTCTTAGAC+TGG + tig0021743:3184-3203 Msa1393500:intron 40.0%
! TTTTAGGCCACTCTTAGACT+GGG + tig0021743:3185-3204 Msa1393500:intron 40.0%
GAATCACGAGTGGATCATAT+TGG + tig0021743:3207-3226 Msa1393500:intron 40.0%
CTTAACAGTCACAACGACTA+AGG - tig0021743:3416-3435 None:intergenic 40.0%
TAGTCGTTGTGACTGTTAAG+AGG + tig0021743:3416-3435 Msa1393500:intron 40.0%
TGTGACTGTTAAGAGGATTG+TGG + tig0021743:3423-3442 Msa1393500:intron 40.0%
GTGACTGTTAAGAGGATTGT+GGG + tig0021743:3424-3443 Msa1393500:intron 40.0%
AACAAAAATGAAGGTGGGAG+GGG - tig0021743:3643-3662 None:intergenic 40.0%
GAAACAAAAATGAAGGTGGG+AGG - tig0021743:3645-3664 None:intergenic 40.0%
AATAAATGAGGAGGGCAGAA+AGG - tig0021743:3683-3702 None:intergenic 40.0%
! CCGTGATGGAATTATAGACA+AGG - tig0021743:3739-3758 None:intergenic 40.0%
! TTTGAGGCACACTTTGCTTT+AGG + tig0021743:3800-3819 Msa1393500:intron 40.0%
TATTCTAGACGGAAGGTTCA+AGG + tig0021743:3835-3854 Msa1393500:intron 40.0%
CATTACGAAAGTTGTGCTTC+TGG + tig0021743:4253-4272 Msa1393500:intron 40.0%
TTGTGCTTCTGGATGGAAAA+TGG + tig0021743:4264-4283 Msa1393500:intron 40.0%
TGGATGGAAAATGGCAATAC+AGG + tig0021743:4273-4292 Msa1393500:intron 40.0%
! TGAGACAAGGAAAAAAGCAC+TGG + tig0021743:4348-4367 Msa1393500:intron 40.0%
TGAAGCTTCAACCGATAGTT+CGG - tig0021743:4610-4629 None:intergenic 40.0%
AAGAAAACATGACTGGGTTG+AGG + tig0021743:4976-4995 Msa1393500:CDS 40.0%
! AGAAAACATGACTGGGTTGA+GGG + tig0021743:4977-4996 Msa1393500:CDS 40.0%
!!! CCTTAGATTTTGGACTAGTG+AGG - tig0021743:5045-5064 None:intergenic 40.0%
CCTCACTAGTCCAAAATCTA+AGG + tig0021743:5042-5061 Msa1393500:CDS 40.0%
GAGAGCTTCAAAACCTGAAA+AGG + tig0021743:5346-5365 Msa1393500:CDS 40.0%
! CAGATACATCTGTTTTCCCA+CGG + tig0021743:5483-5502 Msa1393500:CDS 40.0%
AGAGGATGTCAAACCTTTCT+CGG + tig0021743:5508-5527 Msa1393500:CDS 40.0%
TGTTTAGTCTGTTCCGAGAA+AGG - tig0021743:5524-5543 None:intergenic 40.0%
!!! TGATTTGGTCCTTTTGCTGA+CGG - tig0021743:5554-5573 None:intergenic 40.0%
GTACAATTAAGCAGTCACTC+AGG + tig0021743:5689-5708 Msa1393500:CDS 40.0%
AATTAAGCAGTCACTCAGGA+GGG + tig0021743:5693-5712 Msa1393500:CDS 40.0%
AGATTCCTTTGTGCCAACTT+TGG - tig0021743:5744-5763 None:intergenic 40.0%
AAAGTTGGCACAAAGGAATC+TGG + tig0021743:5743-5762 Msa1393500:CDS 40.0%
TAAAAGAAAATGGGCCTTGG+AGG + tig0021743:5793-5812 Msa1393500:CDS 40.0%
GAACACAGCAAATGAAAGTC+AGG + tig0021743:5847-5866 Msa1393500:CDS 40.0%
GTCTCATATCAGTTGGCAAT+TGG - tig0021743:6016-6035 None:intergenic 40.0%
ATTGCCAACTGATATGAGAC+CGG + tig0021743:6016-6035 Msa1393500:CDS 40.0%
! GGAATTTTATTGTGGCGACA+AGG - tig0021743:6050-6069 None:intergenic 40.0%
!! TATCCTTTTGGTGGATCCTT+AGG + tig0021743:6204-6223 Msa1393500:intron 40.0%
TATCCTAAGGATCCACCAAA+AGG - tig0021743:6210-6229 None:intergenic 40.0%
ACCCTAAATTAGTTCGCAGT+CGG - tig0021743:6247-6266 None:intergenic 40.0%
TCCTTGACAGTTTAGAAGGA+GGG + tig0021743:6266-6285 Msa1393500:intron 40.0%
CTTGGGAAAAAAAAGGAAGG+AGG + tig0021743:6293-6312 Msa1393500:intron 40.0%
! GTATTGGGGGATAATTTTGG+AGG + tig0021743:6413-6432 Msa1393500:intron 40.0%
TAAAAGCCAAGGCTCTGTTT+GGG - tig0021743:6688-6707 None:intergenic 40.0%
TGGAAAATTCAGTAGCAACC+AGG - tig0021743:6745-6764 None:intergenic 40.0%
! GCTACTGAATTTTCCATCGT+TGG + tig0021743:6749-6768 Msa1393500:intron 40.0%
CTTAATCCCAGTTCCATTGT+TGG + tig0021743:6772-6791 Msa1393500:intron 40.0%
CTGATACCAACAATGGAACT+GGG - tig0021743:6781-6800 None:intergenic 40.0%
ACTGATACCAACAATGGAAC+TGG - tig0021743:6782-6801 None:intergenic 40.0%
TCTGCAGTTCTACGAATGAT+TGG - tig0021743:7008-7027 None:intergenic 40.0%
TCTGATTGATCAGTTTGCAC+GGG - tig0021743:7197-7216 None:intergenic 40.0%
TCAACGCTATTTGAACTGCA+GGG - tig0021743:7247-7266 None:intergenic 40.0%
TTCAACGCTATTTGAACTGC+AGG - tig0021743:7248-7267 None:intergenic 40.0%
TCACCAAAAATATCCAGCTC+GGG - tig0021743:7383-7402 None:intergenic 40.0%
GTTAGGGATCTTTGTAACAC+TGG - tig0021743:7444-7463 None:intergenic 40.0%
!!! CTCTGCTCTTCTTTTAGGTT+AGG - tig0021743:7461-7480 None:intergenic 40.0%
TTTGGATAGTGCAGACTGTA+AGG + tig0021743:7538-7557 Msa1393500:CDS 40.0%
TTGGATAGTGCAGACTGTAA+GGG + tig0021743:7539-7558 Msa1393500:CDS 40.0%
! TCTGAAAACAATGAAGTGCC+AGG + tig0021743:7563-7582 Msa1393500:CDS 40.0%
! CATTAATGGTGGAATCCTTC+TGG - tig0021743:7628-7647 None:intergenic 40.0%
TCCACCATTAATGCAGAGAT+TGG + tig0021743:7635-7654 Msa1393500:CDS 40.0%
! CAGTAAATGGTGCTGAAGTA+GGG + tig0021743:7870-7889 Msa1393500:CDS 40.0%
!! ATTAGGAGGTTTGCTAGTGA+TGG - tig0021743:7930-7949 None:intergenic 40.0%
AGCAAACCTCCTAATACATC+CGG + tig0021743:7935-7954 Msa1393500:intron 40.0%
! TCGAATATTTTCATCGGTCC+CGG - tig0021743:7957-7976 None:intergenic 40.0%
GGACCGATGAAAATATTCGA+AGG + tig0021743:7957-7976 Msa1393500:intron 40.0%
CTTTCTCACCTTCCTTTATG+AGG - tig0021743:8509-8528 None:intergenic 40.0%
CAACGTCACACCTAACAAAA+AGG - tig0021743:8645-8664 None:intergenic 40.0%
! GCAATGTAGCACCATTTTCA+TGG - tig0021743:8726-8745 None:intergenic 40.0%
GTGCTACATTGCGAACAATA+GGG + tig0021743:8734-8753 Msa1393500:three_prime_UTR 40.0%
!!! TGGCCTCTGTAGTTTTGTAT+TGG + tig0021743:8907-8926 Msa1393500:three_prime_UTR 40.0%
CTGCCAATACAAAACTACAG+AGG - tig0021743:8913-8932 None:intergenic 40.0%
CTTCTTGGTACAGCATACAT+AGG - tig0021743:9029-9048 None:intergenic 40.0%
TAGGCAGTTACTTGCTTGGA+TGG + tig0021743:683-702 Msa1393500:five_prime_UTR 45.0%
GTTACTTGCTTGGATGGTGA+TGG + tig0021743:689-708 Msa1393500:five_prime_UTR 45.0%
GTTCATCCACAAGAGCCATT+TGG + tig0021743:909-928 Msa1393500:intron 45.0%
ATTCTGCCAAATGGCTCTTG+TGG - tig0021743:918-937 None:intergenic 45.0%
GATGGACAGTTACGTCTAGA+AGG + tig0021743:1016-1035 Msa1393500:intron 45.0%
TTACGTCTAGAAGGTGGATC+AGG + tig0021743:1025-1044 Msa1393500:intron 45.0%
GGCCACACTTTAACAAAGTC+AGG - tig0021743:1106-1125 None:intergenic 45.0%
! ACCAACTTTTATGGGTGTCC+AGG + tig0021743:1224-1243 Msa1393500:intron 45.0%
! CCAACTTTTATGGGTGTCCA+GGG + tig0021743:1225-1244 Msa1393500:intron 45.0%
GCAGGTAAAGCAACAATCAG+AGG - tig0021743:1293-1312 None:intergenic 45.0%
CGTGATACCTGTCAATTTGC+AGG - tig0021743:1311-1330 None:intergenic 45.0%
! AGGTATCACGCCTTTTGTGT+GGG + tig0021743:1321-1340 Msa1393500:intron 45.0%
AAGGTACATCTGACAGTACG+TGG + tig0021743:1355-1374 Msa1393500:five_prime_UTR 45.0%
TCACGTGACTGAAAGGTCAT+GGG - tig0021743:1913-1932 None:intergenic 45.0%
GTTGTTGTCACGTGACTGAA+AGG - tig0021743:1920-1939 None:intergenic 45.0%
ACAACTTTACCGTTGTGCCA+AGG + tig0021743:1935-1954 Msa1393500:intron 45.0%
TAAGAGACCCATACTGAAGG+GGG - tig0021743:1963-1982 None:intergenic 45.0%
GTCTGTGTCCATTGCTGATA+CGG + tig0021743:2521-2540 Msa1393500:five_prime_UTR 45.0%
TCTGTGTCCATTGCTGATAC+GGG + tig0021743:2522-2541 Msa1393500:five_prime_UTR 45.0%
CATCAACTTCAGGAGGCAAT+AGG - tig0021743:2614-2633 None:intergenic 45.0%
CTATTGCCTCCTGAAGTTGA+TGG + tig0021743:2612-2631 Msa1393500:CDS 45.0%
!! ATTGCCTCCTGAAGTTGATG+GGG + tig0021743:2614-2633 Msa1393500:CDS 45.0%
AACAGATCCCCATCAACTTC+AGG - tig0021743:2624-2643 None:intergenic 45.0%
GGACACAAATAATCAGCTGC+AGG + tig0021743:2668-2687 Msa1393500:CDS 45.0%
AACTGTGTCACCGATCATGA+AGG + tig0021743:2704-2723 Msa1393500:CDS 45.0%
ACTGTGTCACCGATCATGAA+GGG + tig0021743:2705-2724 Msa1393500:CDS 45.0%
!!! GCATGGACTAGTTTTGGCAT+TGG - tig0021743:2859-2878 None:intergenic 45.0%
!!! TCGGTGGGCACTTTTTTAAC+TGG + tig0021743:2915-2934 Msa1393500:CDS 45.0%
!! AAGTCTTCTGGAATCGAGCA+CGG - tig0021743:3109-3128 None:intergenic 45.0%
CCTTCCAAAGGAAAGTCTTC+TGG - tig0021743:3121-3140 None:intergenic 45.0%
CCAGAAGACTTTCCTTTGGA+AGG + tig0021743:3118-3137 Msa1393500:CDS 45.0%
TTAAGAGGATTGTGGGAGAG+AGG + tig0021743:3431-3450 Msa1393500:intron 45.0%
! TTTTAAGCCTTTGGACAGGG+AGG - tig0021743:3586-3605 None:intergenic 45.0%
ACAAAAATGAAGGTGGGAGG+GGG - tig0021743:3642-3661 None:intergenic 45.0%
CTGCCCTCCTCATTTATTGA+AGG + tig0021743:3685-3704 Msa1393500:intron 45.0%
GAATTATAGACAAGGGGGAG+CGG - tig0021743:3731-3750 None:intergenic 45.0%
ATGTCAATGCTAGACCGTGA+TGG - tig0021743:3753-3772 None:intergenic 45.0%
TTCTGTGGAACAGCGCATAT+AGG - tig0021743:4113-4132 None:intergenic 45.0%
! CACACTTCTAAAGGCAAGCA+TGG - tig0021743:4205-4224 None:intergenic 45.0%
! TGCTTGCCTTTAGAAGTGTG+TGG + tig0021743:4205-4224 Msa1393500:intron 45.0%
ACGAAAGTTGTGCTTCTGGA+TGG + tig0021743:4257-4276 Msa1393500:intron 45.0%
GATCGATGCAAGGTTCAGAA+GGG - tig0021743:4425-4444 None:intergenic 45.0%
TGATCGATGCAAGGTTCAGA+AGG - tig0021743:4426-4445 None:intergenic 45.0%
AAGCTTCAACCGATAGTTCG+GGG - tig0021743:4608-4627 None:intergenic 45.0%
GAAGCTTCAACCGATAGTTC+GGG - tig0021743:4609-4628 None:intergenic 45.0%
TGAAGCTTCAGCCGATAGTT+CGG - tig0021743:4739-4758 None:intergenic 45.0%
GATGCTGCAATCTCCTTTGT+TGG - tig0021743:4867-4886 None:intergenic 45.0%
ACGAACCGTAAGCTTTCCAA+GGG + tig0021743:4912-4931 Msa1393500:CDS 45.0%
CAAGTCCCTTGGAAAGCTTA+CGG - tig0021743:4920-4939 None:intergenic 45.0%
ATTAGTGTCAGCAAGTCCCT+TGG - tig0021743:4931-4950 None:intergenic 45.0%
!! CCTTTAGGGCTGCTATAACA+GGG + tig0021743:5144-5163 Msa1393500:CDS 45.0%
TCTTTGCCTTCAGAGCTGAA+GGG - tig0021743:5199-5218 None:intergenic 45.0%
TTCTTTGCCTTCAGAGCTGA+AGG - tig0021743:5200-5219 None:intergenic 45.0%
TGCACGCTTTCTTCTACCAT+TGG - tig0021743:5282-5301 None:intergenic 45.0%
! ATGGTAGAAGAAAGCGTGCA+TGG + tig0021743:5282-5301 Msa1393500:CDS 45.0%
! TGGTAGAAGAAAGCGTGCAT+GGG + tig0021743:5283-5302 Msa1393500:CDS 45.0%
! AAGAAAGCGTGCATGGGATA+GGG + tig0021743:5289-5308 Msa1393500:CDS 45.0%
TGGATTCTTGGCCTGACATT+CGG - tig0021743:5441-5460 None:intergenic 45.0%
! ATCTGTTTTCCCACGGAAAG+AGG + tig0021743:5490-5509 Msa1393500:CDS 45.0%
GTTTGACATCCTCTTTCCGT+GGG - tig0021743:5502-5521 None:intergenic 45.0%
CAATTAAGCAGTCACTCAGG+AGG + tig0021743:5692-5711 Msa1393500:CDS 45.0%
ATTAAGCAGTCACTCAGGAG+GGG + tig0021743:5694-5713 Msa1393500:CDS 45.0%
GCATCAGTTTCTTCTTCAGC+TGG + tig0021743:5716-5735 Msa1393500:CDS 45.0%
! TTTTCTCGCAAGAACCTCCA+AGG - tig0021743:5810-5829 None:intergenic 45.0%
AACACCGGTCTCATATCAGT+TGG - tig0021743:6023-6042 None:intergenic 45.0%
AACTGATATGAGACCGGTGT+TGG + tig0021743:6022-6041 Msa1393500:CDS 45.0%
! TGCCGACTGCGAACTAATTT+AGG + tig0021743:6242-6261 Msa1393500:intron 45.0%
GCCGACTGCGAACTAATTTA+GGG + tig0021743:6243-6262 Msa1393500:intron 45.0%
AGGGTCCTTGACAGTTTAGA+AGG + tig0021743:6262-6281 Msa1393500:intron 45.0%
GTCCTTGACAGTTTAGAAGG+AGG + tig0021743:6265-6284 Msa1393500:intron 45.0%
TCCCTCCTTCTAAACTGTCA+AGG - tig0021743:6270-6289 None:intergenic 45.0%
TTGACAGTTTAGAAGGAGGG+AGG + tig0021743:6269-6288 Msa1393500:intron 45.0%
TGACAGTTTAGAAGGAGGGA+GGG + tig0021743:6270-6289 Msa1393500:intron 45.0%
GGGCTTGGGAAAAAAAAGGA+AGG + tig0021743:6290-6309 Msa1393500:intron 45.0%
! ACGAACTCCCCATTCTAGTT+GGG - tig0021743:6347-6366 None:intergenic 45.0%
AACGAACTCCCCATTCTAGT+TGG - tig0021743:6348-6367 None:intergenic 45.0%
GTAAAAGCCAAGGCTCTGTT+TGG - tig0021743:6689-6708 None:intergenic 45.0%
GTTACCAAACCACAAACACC+TGG + tig0021743:6724-6743 Msa1393500:intron 45.0%
AACTGGGATTAAGCCAACGA+TGG - tig0021743:6765-6784 None:intergenic 45.0%
TCTTCAATAAGCGTTCCGTC+AGG - tig0021743:6974-6993 None:intergenic 45.0%
TAGAACTGCAGACACAGAGT+TGG + tig0021743:7016-7035 Msa1393500:CDS 45.0%
! CATCCCGAGCTGGATATTTT+TGG + tig0021743:7377-7396 Msa1393500:CDS 45.0%
! TGTTTTCTTCAAGCTCGTGG+TGG - tig0021743:7510-7529 None:intergenic 45.0%
TGGATAGTGCAGACTGTAAG+GGG + tig0021743:7540-7559 Msa1393500:CDS 45.0%
! GAAAACAATGAAGTGCCAGG+AGG + tig0021743:7566-7585 Msa1393500:CDS 45.0%
ACTGCATCTCTGTGACAGTT+TGG - tig0021743:7605-7624 None:intergenic 45.0%
GCCAATCTCTGCATTAATGG+TGG - tig0021743:7639-7658 None:intergenic 45.0%
CTGGCCAATCTCTGCATTAA+TGG - tig0021743:7642-7661 None:intergenic 45.0%
TGGTAGGAGTCCAGAAGAAA+CGG - tig0021743:7669-7688 None:intergenic 45.0%
ATTACATGGAGAGGGCAAGA+CGG + tig0021743:7790-7809 Msa1393500:CDS 45.0%
AGTCGCGTTCTTCTTCCTTA+TGG - tig0021743:7841-7860 None:intergenic 45.0%
! GCAGTAAATGGTGCTGAAGT+AGG + tig0021743:7869-7888 Msa1393500:CDS 45.0%
!! GAGGTTTGCTAGTGATGGTA+GGG - tig0021743:7925-7944 None:intergenic 45.0%
GCAAACCTCCTAATACATCC+GGG + tig0021743:7936-7955 Msa1393500:intron 45.0%
! CATTGTTTGACTTCTGGGCA+GGG - tig0021743:8003-8022 None:intergenic 45.0%
! TCATTGTTTGACTTCTGGGC+AGG - tig0021743:8004-8023 None:intergenic 45.0%
ACAGGTAGAAGCCTACATCA+AGG + tig0021743:8365-8384 Msa1393500:intron 45.0%
CCTGATATGCTCCTTGATGT+AGG - tig0021743:8379-8398 None:intergenic 45.0%
! CCTACATCAAGGAGCATATC+AGG + tig0021743:8376-8395 Msa1393500:CDS 45.0%
ATCACACCACTCTTGCACAA+TGG - tig0021743:8402-8421 None:intergenic 45.0%
! GGTGCTACATTGCGAACAAT+AGG + tig0021743:8733-8752 Msa1393500:three_prime_UTR 45.0%
!! TGGGAGGTACTCAAAGTGAA+AGG + tig0021743:8858-8877 Msa1393500:three_prime_UTR 45.0%
ACAAAACTACAGAGGCCATG+AGG - tig0021743:8905-8924 None:intergenic 45.0%
ATTGGCAGATTCTATAGGGG+TGG + tig0021743:8925-8944 Msa1393500:three_prime_UTR 45.0%
GGACAGTTACGTCTAGAAGG+TGG + tig0021743:1019-1038 Msa1393500:intron 50.0%
CCCTGGACACCCATAAAAGT+TGG - tig0021743:1228-1247 None:intergenic 50.0%
! CAGGTATCACGCCTTTTGTG+TGG + tig0021743:1320-1339 Msa1393500:intron 50.0%
ACAGTACGTGGTTATGCCCA+AGG + tig0021743:1367-1386 Msa1393500:five_prime_UTR 50.0%
! ACACGGGAGCTTTAGTGCAT+CGG - tig0021743:1800-1819 None:intergenic 50.0%
ACTAAAGCTCCCGTGTACAC+AGG + tig0021743:1804-1823 Msa1393500:intron 50.0%
CTAAAGCTCCCGTGTACACA+GGG + tig0021743:1805-1824 Msa1393500:intron 50.0%
AAGGTCATGGGTTCAAGTCC+TGG - tig0021743:1901-1920 None:intergenic 50.0%
GTCACGTGACTGAAAGGTCA+TGG - tig0021743:1914-1933 None:intergenic 50.0%
TTCAATAAAGGGGGCTTCCC+TGG + tig0021743:2452-2471 Msa1393500:five_prime_UTR 50.0%
TGTCTCTCCCGTATCAGCAA+TGG - tig0021743:2532-2551 None:intergenic 50.0%
GACAGCTGTGGTTGTCTCAA+TGG + tig0021743:2548-2567 Msa1393500:exon 50.0%
AGGCCTCTCTCACTTGTTTC+TGG - tig0021743:2594-2613 None:intergenic 50.0%
AGATCCCCATCAACTTCAGG+AGG - tig0021743:2621-2640 None:intergenic 50.0%
!! CGTGAACCGAGTAGCTTTGA+TGG + tig0021743:2813-2832 Msa1393500:CDS 50.0%
!! AGTCTTCTGGAATCGAGCAC+GGG - tig0021743:3108-3127 None:intergenic 50.0%
CGTGATTCCCAGTCTAAGAG+TGG - tig0021743:3195-3214 None:intergenic 50.0%
CTTAGACTGGGAATCACGAG+TGG + tig0021743:3197-3216 Msa1393500:intron 50.0%
TTGTGATGACAGTGCCAGAG+TGG + tig0021743:3314-3333 Msa1393500:CDS 50.0%
ATGCAAACCTCCCTGTCCAA+AGG + tig0021743:3576-3595 Msa1393500:intron 50.0%
ATGAGGAGGGCAGAAAGGAA+GGG - tig0021743:3678-3697 None:intergenic 50.0%
AATGAGGAGGGCAGAAAGGA+AGG - tig0021743:3679-3698 None:intergenic 50.0%
AGATGCCAACCCCGAACTAT+CGG + tig0021743:4596-4615 Msa1393500:CDS 50.0%
TTCAACCGATAGTTCGGGGT+TGG - tig0021743:4604-4623 None:intergenic 50.0%
CATTTGACTAGCAGCTGCTC+TGG - tig0021743:4643-4662 None:intergenic 50.0%
AGATGCCAACCCCGAACTAT+CGG + tig0021743:4596-4615 Msa1393500:CDS 50.0%
AAGCTTCAGCCGATAGTTCG+GGG - tig0021743:4737-4756 None:intergenic 50.0%
GAAGCTTCAGCCGATAGTTC+GGG - tig0021743:4738-4757 None:intergenic 50.0%
CATTTGACTAGCAGCTGCTC+TGG - tig0021743:4643-4662 None:intergenic 50.0%
GACGAACCGTAAGCTTTCCA+AGG + tig0021743:4911-4930 Msa1393500:CDS 50.0%
!! GCCTTTAGGGCTGCTATAAC+AGG + tig0021743:5143-5162 Msa1393500:CDS 50.0%
CCCTGTTATAGCAGCCCTAA+AGG - tig0021743:5147-5166 None:intergenic 50.0%
! GTTATCCCCTTCAGCTCTGA+AGG + tig0021743:5190-5209 Msa1393500:CDS 50.0%
CTTTGCCTTCAGAGCTGAAG+GGG - tig0021743:5198-5217 None:intergenic 50.0%
! GAAGAAAGCGTGCATGGGAT+AGG + tig0021743:5288-5307 Msa1393500:CDS 50.0%
GGATTCTTGGCCTGACATTC+GGG - tig0021743:5440-5459 None:intergenic 50.0%
GGTTTGACATCCTCTTTCCG+TGG - tig0021743:5503-5522 None:intergenic 50.0%
AAGATTGTACGTGGTCCAGC+TGG + tig0021743:5662-5681 Msa1393500:CDS 50.0%
! TCTTCAGCTGGTGCCAAAGT+TGG + tig0021743:5728-5747 Msa1393500:CDS 50.0%
! TGGTGCCAAAGTTGGCACAA+AGG + tig0021743:5736-5755 Msa1393500:CDS 50.0%
AATTCCTGTATCCGTGAGGC+AGG + tig0021743:6064-6083 Msa1393500:CDS 50.0%
TAGTTCGCAGTCGGCAGAAA+GGG - tig0021743:6238-6257 None:intergenic 50.0%
TTAGTTCGCAGTCGGCAGAA+AGG - tig0021743:6239-6258 None:intergenic 50.0%
TTTAGAAGGAGGGAGGGCTT+GGG + tig0021743:6276-6295 Msa1393500:intron 50.0%
GGGAGGGCTTGGGAAAAAAA+AGG + tig0021743:6286-6305 Msa1393500:intron 50.0%
ATGGACCCCCCAACTAGAAT+GGG + tig0021743:6336-6355 Msa1393500:intron 50.0%
! AACTCCCCATTCTAGTTGGG+GGG - tig0021743:6344-6363 None:intergenic 50.0%
! GAACTCCCCATTCTAGTTGG+GGG - tig0021743:6345-6364 None:intergenic 50.0%
! CGAACTCCCCATTCTAGTTG+GGG - tig0021743:6346-6365 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG - tig0021743:6542-6561 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - tig0021743:6541-6560 None:intergenic 50.0%
! CTCTGTTTGGGACTTTGCAG+GGG - tig0021743:6676-6695 None:intergenic 50.0%
! GCTCTGTTTGGGACTTTGCA+GGG - tig0021743:6677-6696 None:intergenic 50.0%
CAAAGTCCCAAACAGAGCCT+TGG + tig0021743:6679-6698 Msa1393500:intron 50.0%
GCAACCAGGTGTTTGTGGTT+TGG - tig0021743:6731-6750 None:intergenic 50.0%
CAGTAGCAACCAGGTGTTTG+TGG - tig0021743:6736-6755 None:intergenic 50.0%
TCAATAAGCGTTCCGTCAGG+CGG - tig0021743:6971-6990 None:intergenic 50.0%
! AGTTTGCACGGGTGATGATG+AGG - tig0021743:7186-7205 None:intergenic 50.0%
TTGTTCTTGTGGGGACTGCT+TGG - tig0021743:7299-7318 None:intergenic 50.0%
ACTAGAATCTCATCCCGAGC+TGG + tig0021743:7367-7386 Msa1393500:CDS 50.0%
! GTGACAGTTTGGTGAGCAAG+AGG - tig0021743:7594-7613 None:intergenic 50.0%
TCACAGAGATGCAGTCCAGA+AGG + tig0021743:7610-7629 Msa1393500:CDS 50.0%
AGGAGTCCAGAAGAAACGGA+AGG - tig0021743:7665-7684 None:intergenic 50.0%
TCTGGACTCCTACCATGTGA+AGG + tig0021743:7674-7693 Msa1393500:CDS 50.0%
CAACAGCACCTTCACATGGT+AGG - tig0021743:7685-7704 None:intergenic 50.0%
GGATCAACAGCACCTTCACA+TGG - tig0021743:7689-7708 None:intergenic 50.0%
!! GGAGGTTTGCTAGTGATGGT+AGG - tig0021743:7926-7945 None:intergenic 50.0%
TCATCGGTCCCGGATGTATT+AGG - tig0021743:7947-7966 None:intergenic 50.0%
ATCAGGCCATTGTGCAAGAG+TGG + tig0021743:8393-8412 Msa1393500:CDS 50.0%
GTGCAAGAGTGGTGTGATCA+CGG + tig0021743:8404-8423 Msa1393500:CDS 50.0%
TGATCACGGCTGAACAGTAC+AGG + tig0021743:8418-8437 Msa1393500:CDS 50.0%
AAACTCGCGGAGCAGTATGT+TGG + tig0021743:8534-8553 Msa1393500:CDS 50.0%
GTGCAGTGTGATTCATTCGC+TGG + tig0021743:8796-8815 Msa1393500:three_prime_UTR 50.0%
AAACTACAGAGGCCATGAGG+AGG - tig0021743:8902-8921 None:intergenic 50.0%
! CACGGGAGCTTTAGTGCATC+GGG - tig0021743:1799-1818 None:intergenic 55.0%
TTCCCGAACCCTGTGTACAC+GGG - tig0021743:1816-1835 None:intergenic 55.0%
CTTCCCGAACCCTGTGTACA+CGG - tig0021743:1817-1836 None:intergenic 55.0%
GTGTACACAGGGTTCGGGAA+GGG + tig0021743:1816-1835 Msa1393500:intron 55.0%
TGTACACAGGGTTCGGGAAG+GGG + tig0021743:1817-1836 Msa1393500:intron 55.0%
CAAGGCTCCCCCTTCAGTAT+GGG + tig0021743:1953-1972 Msa1393500:intron 55.0%
TGATACGGGAGAGACAGCTG+TGG + tig0021743:2536-2555 Msa1393500:five_prime_UTR 55.0%
CCTCTTTCTACCAGCCACTC+TGG - tig0021743:3331-3350 None:intergenic 55.0%
CCAGAGTGGCTGGTAGAAAG+AGG + tig0021743:3328-3347 Msa1393500:CDS 55.0%
GAGAGGCAGAGAGAATCGAC+AGG + tig0021743:3448-3467 Msa1393500:intron 55.0%
ATGAAGGTGGGAGGGGGATA+GGG - tig0021743:3636-3655 None:intergenic 55.0%
AATGAAGGTGGGAGGGGGAT+AGG - tig0021743:3637-3656 None:intergenic 55.0%
TTCAGCCGATAGTTCGGGGT+TGG - tig0021743:4733-4752 None:intergenic 55.0%
CTTACCTGCCTCACGGATAC+AGG - tig0021743:6071-6090 None:intergenic 55.0%
GCTACAGCTTACCTGCCTCA+CGG - tig0021743:6078-6097 None:intergenic 55.0%
GTTTAGAAGGAGGGAGGGCT+TGG + tig0021743:6275-6294 Msa1393500:intron 55.0%
GATGGACCCCCCAACTAGAA+TGG + tig0021743:6335-6354 Msa1393500:intron 55.0%
TGGACCCCCCAACTAGAATG+GGG + tig0021743:6337-6356 Msa1393500:intron 55.0%
GAGAGAGAGAGAGAGAGGGA+GGG - tig0021743:6538-6557 None:intergenic 55.0%
AGAGAGAGAGAGAGAGAGGG+AGG - tig0021743:6539-6558 None:intergenic 55.0%
GAGAGAGAGAGAGAGGGAGA+GGG - tig0021743:6630-6649 None:intergenic 55.0%
GAGAGGGAGAGAGAGAGAGA+GGG - tig0021743:6608-6627 None:intergenic 55.0%
AGAGAGGGAGAGAGAGAGAG+AGG - tig0021743:6637-6656 None:intergenic 55.0%
! TTTGCAGGGGAGGGCTTTAG+GGG - tig0021743:6663-6682 None:intergenic 55.0%
CTTTGCAGGGGAGGGCTTTA+GGG - tig0021743:6664-6683 None:intergenic 55.0%
ACTTTGCAGGGGAGGGCTTT+AGG - tig0021743:6665-6684 None:intergenic 55.0%
! GTTTGGGACTTTGCAGGGGA+GGG - tig0021743:6672-6691 None:intergenic 55.0%
! TGTTTGGGACTTTGCAGGGG+AGG - tig0021743:6673-6692 None:intergenic 55.0%
! GGCTCTGTTTGGGACTTTGC+AGG - tig0021743:6678-6697 None:intergenic 55.0%
! TGCACGGGTGATGATGAGGT+TGG - tig0021743:7182-7201 None:intergenic 55.0%
TTCTTGTGGGGACTGCTTGG+AGG - tig0021743:7296-7315 None:intergenic 55.0%
GTCCAGAAGAAACGGAAGGC+TGG - tig0021743:7661-7680 None:intergenic 55.0%
TCGGTCCCGGATGTATTAGG+AGG - tig0021743:7944-7963 None:intergenic 55.0%
TCACGGCTGAACAGTACAGG+TGG + tig0021743:8421-8440 Msa1393500:CDS 55.0%
CACGGCTGAACAGTACAGGT+GGG + tig0021743:8422-8441 Msa1393500:CDS 55.0%
GCTCCCGTGTACACAGGGTT+CGG + tig0021743:1810-1829 Msa1393500:intron 60.0%
CTCCCGTGTACACAGGGTTC+GGG + tig0021743:1811-1830 Msa1393500:intron 60.0%
CGTGTACACAGGGTTCGGGA+AGG + tig0021743:1815-1834 Msa1393500:intron 60.0%
! GGGAAGGGGTCCCACCATTT+TGG + tig0021743:1831-1850 Msa1393500:intron 60.0%
AAGGGGGAGCCTTGGCACAA+CGG - tig0021743:1947-1966 None:intergenic 60.0%
CCATACTGAAGGGGGAGCCT+TGG - tig0021743:1955-1974 None:intergenic 60.0%
CCAAGGCTCCCCCTTCAGTA+TGG + tig0021743:1952-1971 Msa1393500:intron 60.0%
GATGACAGTGCCAGAGTGGC+TGG + tig0021743:3318-3337 Msa1393500:CDS 60.0%
TGAAGGTGGGAGGGGGATAG+GGG - tig0021743:3635-3654 None:intergenic 60.0%
AGGGGGAGCGGAGAGATTTG+AGG - tig0021743:3719-3738 None:intergenic 60.0%
CGGGAGCTCGCTCTGATTCT+GGG - tig0021743:5421-5440 None:intergenic 60.0%
TCGGGAGCTCGCTCTGATTC+TGG - tig0021743:5422-5441 None:intergenic 60.0%
AGAGCGAGCTCCCGAATGTC+AGG + tig0021743:5427-5446 Msa1393500:CDS 60.0%
! TGGCGACAAGGTGCCAACAC+CGG - tig0021743:6038-6057 None:intergenic 60.0%
AGGGAGGGAGAGAGAGAGAG+AGG - tig0021743:6519-6538 None:intergenic 60.0%
GAGAGAGAGAGAGGGAGGGA+GGG - tig0021743:6534-6553 None:intergenic 60.0%
AGAGAGAGAGAGAGGGAGGG+AGG - tig0021743:6535-6554 None:intergenic 60.0%
GAGAGAGAGGGAGAGGGAGA+GGG - tig0021743:6624-6643 None:intergenic 60.0%
AGAGAGAGAGGGAGAGGGAG+AGG - tig0021743:6625-6644 None:intergenic 60.0%
GGAGAGAGAGAGAGAGGGAG+AGG - tig0021743:6631-6650 None:intergenic 60.0%
!! GGGCTTTAGGGGGAGAGAGA+GGG - tig0021743:6652-6671 None:intergenic 60.0%
!! AGGGCTTTAGGGGGAGAGAG+AGG - tig0021743:6653-6672 None:intergenic 60.0%
!! TTGCAGGGGAGGGCTTTAGG+GGG - tig0021743:6662-6681 None:intergenic 60.0%
GACACAGCTGTACCGCCTGA+CGG + tig0021743:6956-6975 Msa1393500:intron 60.0%
GGCCAGCCTTCCGTTTCTTC+TGG + tig0021743:7656-7675 Msa1393500:CDS 60.0%
!! GGTGAGCAAGAGGCACCTCC+TGG - tig0021743:7584-7603 None:intergenic 65.0%
GTGGGAGGGGGATAGGGGAG+AGG - tig0021743:3630-3649 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0021743 gene 640 9090 640 ID=Msa1393500;Name=Msa1393500
tig0021743 mRNA 640 9090 640 ID=Msa1393500-mRNA-1;Parent=Msa1393500;Name=Msa1393500-mRNA-1;_AED=0.02;_eAED=0.02;_QI=376|0.87|0.88|1|1|1|9|506|1039
tig0021743 exon 640 795 640 ID=Msa1393500-mRNA-1:exon:13835;Parent=Msa1393500-mRNA-1
tig0021743 exon 1323 1388 1323 ID=Msa1393500-mRNA-1:exon:13836;Parent=Msa1393500-mRNA-1
tig0021743 exon 2413 2936 2413 ID=Msa1393500-mRNA-1:exon:13837;Parent=Msa1393500-mRNA-1
tig0021743 exon 3059 3139 3059 ID=Msa1393500-mRNA-1:exon:13838;Parent=Msa1393500-mRNA-1
tig0021743 exon 3292 3367 3292 ID=Msa1393500-mRNA-1:exon:13839;Parent=Msa1393500-mRNA-1
tig0021743 exon 4563 5907 4563 ID=Msa1393500-mRNA-1:exon:13840;Parent=Msa1393500-mRNA-1
tig0021743 exon 6011 6085 6011 ID=Msa1393500-mRNA-1:exon:13841;Parent=Msa1393500-mRNA-1
tig0021743 exon 6957 7913 6957 ID=Msa1393500-mRNA-1:exon:13842;Parent=Msa1393500-mRNA-1
tig0021743 exon 8369 9090 8369 ID=Msa1393500-mRNA-1:exon:13843;Parent=Msa1393500-mRNA-1
tig0021743 five_prime_UTR 640 795 640 ID=Msa1393500-mRNA-1:five_prime_utr;Parent=Msa1393500-mRNA-1
tig0021743 five_prime_UTR 1323 1388 1323 ID=Msa1393500-mRNA-1:five_prime_utr;Parent=Msa1393500-mRNA-1
tig0021743 five_prime_UTR 2413 2566 2413 ID=Msa1393500-mRNA-1:five_prime_utr;Parent=Msa1393500-mRNA-1
tig0021743 CDS 2567 2936 2567 ID=Msa1393500-mRNA-1:cds;Parent=Msa1393500-mRNA-1
tig0021743 CDS 3059 3139 3059 ID=Msa1393500-mRNA-1:cds;Parent=Msa1393500-mRNA-1
tig0021743 CDS 3292 3367 3292 ID=Msa1393500-mRNA-1:cds;Parent=Msa1393500-mRNA-1
tig0021743 CDS 4563 5907 4563 ID=Msa1393500-mRNA-1:cds;Parent=Msa1393500-mRNA-1
tig0021743 CDS 6011 6085 6011 ID=Msa1393500-mRNA-1:cds;Parent=Msa1393500-mRNA-1
tig0021743 CDS 6957 7913 6957 ID=Msa1393500-mRNA-1:cds;Parent=Msa1393500-mRNA-1
tig0021743 CDS 8369 8584 8369 ID=Msa1393500-mRNA-1:cds;Parent=Msa1393500-mRNA-1
tig0021743 three_prime_UTR 8585 9090 8585 ID=Msa1393500-mRNA-1:three_prime_utr;Parent=Msa1393500-mRNA-1
Gene Sequence

>Msa1393500

ATGGTTGACCGAAACAAATGGATTCCAGAAACAAGTGAGAGAGGCCTATTGCCTCCTGAAGTTGATGGGGATCTGTTGAATGAGCCATGTAAGTTAATGTCGGACACAAATAATCAGCTGCAGGCAACAGAGAAGACAACTGTGTCACCGATCATGAAGGGAGAAGAACTAGAGCTTTCATTATCACACCCAACTTCTAAATCCTTCGTGCATAGCGATTTAAAGGAAAGTGATAATGGAACAAGACGTGAACCGAGTAGCTTTGATGGAACCAAGTTATTTGATGAGTCCAATGCCAAAACTAGTCCATGCAAAATTGAATCTGATATGGGTCTTCATCTTGGTTTATCGGTGGGCACTTTTTTAACTGTCGATAATGTGGACAAGAGCGAATCAAAAGATCAAGCAACTGATCTCCCGTGCTCGATTCCAGAAGACTTTCCTTTGGAAGGAGATAAACTCGAAATCAATGCTTGTGATGACAGTGCCAGAGTGGCTGGTAGAAAGAGGAAGCATTTTGATTACAGTCATGAGCAAGTTCGTATAAAAGTTGAGGATGAAGATGCCAACCCCGAACTATCGGTTGAAGCTTCACAAAAGAAAACCAGAGCAGCTGCTAGTCAAATGTTTAGAGCTAATGACTCGGTCTATTACAGTCATGAGCAAGTTCGTATAAAAGTTGAGGATGAAGATGCCAACCCCGAACTATCGGCTGAAGCTTCACAAAAGAAAACCAGAGCAGCTGCTAGTCAAATGTTTAGAGCTAATGACTCGGTCGATGTTCAACTTTCTGACAATGCTAAGAAAAGTCCCATTTTAAAACATTCTCCAACAAAGGAGATTGCAGCATCAGATATAATGAATATAGTTAAAGGGACGAACCGTAAGCTTTCCAAGGGACTTGCTGACACTAATGCTAATAAAAAGTTAGCTGAAAAGAAAGAAAACATGACTGGGTTGAGGGTGAAAAAGATTATGAAGAGAGTTTCTGATGATGGAGAATCATCCTCACTAGTCCAAAATCTAAGGAAGGAAATTAGAGAAGCTGTCCGCAACAAATCCTCTATAAACTTTGAGGAAAACCATTTTGATAAAAATCTTCTCGAAGCCTTTAGGGCTGCTATAACAGGGCCTAAAACTGAACTTGTAAATAAGTTATCCCCTTCAGCTCTGAAGGCAAAGAAGTCAATGTTGCAGAAAGGAAAAGTACGTGAAAATCTAACAAGGAAAATTTTTGGGACATCCAATGGTAGAAGAAAGCGTGCATGGGATAGGGATTGTGAAATTGAGTTTTGGAAATATCGTTGCATGAGAGCTTCAAAACCTGAAAAGGTCGAAACTTTAAAATCAGTTCTTGATCTTCTAAGAAAAAGTTCAGAGAACCCAGAATCAGAGCGAGCTCCCGAATGTCAGGCCAAGAATCCAATTCTTTCCAGATTGTATATAGCAGATACATCTGTTTTCCCACGGAAAGAGGATGTCAAACCTTTCTCGGAACAGACTAAACAAAATAATCCGTCAGCAAAAGGACCAAATCAATCTGTTGATGACAAGACTATTAAAGCAACAGAGGTAAATAATCTCTTATCAATGACCAAAGTTTGTTTATCTGAGAAAAAAGTAGATAAGATTGTACGTGGTCCAGCTGGTAAAGTACAATTAAGCAGTCACTCAGGAGGGGCATCAGTTTCTTCTTCAGCTGGTGCCAAAGTTGGCACAAAGGAATCTGGCCTTAAATCTGATTCTGTGAAAGGTGATAAAAGAAAATGGGCCTTGGAGGTTCTTGCGAGAAAAACAGCTGTTGCAAGTAAGAACACAGCAAATGAAAGTCAGGAAGACGATGCAATTTTTAAGGGAAATTATCCTTTGCTTGCCCAATTGCCAACTGATATGAGACCGGTGTTGGCACCTTGTCGCCACAATAAAATTCCTGTATCCGTGAGGCAGACACAGCTGTACCGCCTGACGGAACGCTTATTGAAGAACACAAATCTGCCAATCATTCGTAGAACTGCAGACACAGAGTTGGCTGTTGCAGATGCTATTAATATTGAAAAGGAGGTTGCTGACAGATCAAAAAGCAAGCTAGTTTATCTGAATTTTTGTTCACAAGAGCTACTGCATCGCACAAATAACACAAAATCCAACATAAACACAGACACAACTCTACCAACCTCATCATCACCCGTGCAAACTGATCAATCAGAACTAAATACTGATGATCTTTTGACTGACCCTGCAGTTCAAATAGCGTTGAAAAATGCTGGTTTGTTTTCTGATTCACCTCCAAGCAGTCCCCACAAGAACAATGAAATATGTAATGAAAAGGAAGTGTCAGGGCCTGATGATATACTTGAACTAGAATCTCATCCCGAGCTGGATATTTTTGGTGATTTTGAGTATGATTTGGAAGATGATGATTACATAGGTGCCAGTGTTACAAAGATCCCTAACCTAAAAGAAGAGCAGAGTGAATCAAAAGTGAAACTCGTTTTCTCCACCACGAGCTTGAAGAAAACAAATAATGCTTTGGATAGTGCAGACTGTAAGGGGTCTGAAAACAATGAAGTGCCAGGAGGTGCCTCTTGCTCACCAAACTGTCACAGAGATGCAGTCCAGAAGGATTCCACCATTAATGCAGAGATTGGCCAGCCTTCCGTTTCTTCTGGACTCCTACCATGTGAAGGTGCTGTTGATCCAGTTGATTCAGAATTTGAAGATTTATACGGCCCTGATAAAGAACCACTTATAAAAAAGTTTCCAGATGGTGAATTACAATCATTACATGGAGAGGGCAAGACGGAAACTCAATGCGAGAATAATGATTGCCATAAGGAAGAAGAACGCGACTTAGACAAAGCAGTAAATGGTGCTGAAGTAGGGAATGAGAATCTCACAGAAAATGTAGAAGCCTACATCAAGGAGCATATCAGGCCATTGTGCAAGAGTGGTGTGATCACGGCTGAACAGTACAGGTGGGCTGTTGCAAAAACAACTGAAAAGGTTATGAAGTATCATTGCAAATCAAAGAATGCTAATTTCCTCATAAAGGAAGGTGAGAAAGTAAAGAAACTCGCGGAGCAGTATGTTGGAACAGCCCAACAAAATAGAAAAAGTTGA
Protein sequence

>Msa1393500

MVDRNKWIPETSERGLLPPEVDGDLLNEPCKLMSDTNNQLQATEKTTVSPIMKGEELELSLSHPTSKSFVHSDLKESDNGTRREPSSFDGTKLFDESNAKTSPCKIESDMGLHLGLSVGTFLTVDNVDKSESKDQATDLPCSIPEDFPLEGDKLEINACDDSARVAGRKRKHFDYSHEQVRIKVEDEDANPELSVEASQKKTRAAASQMFRANDSVYYSHEQVRIKVEDEDANPELSAEASQKKTRAAASQMFRANDSVDVQLSDNAKKSPILKHSPTKEIAASDIMNIVKGTNRKLSKGLADTNANKKLAEKKENMTGLRVKKIMKRVSDDGESSSLVQNLRKEIREAVRNKSSINFEENHFDKNLLEAFRAAITGPKTELVNKLSPSALKAKKSMLQKGKVRENLTRKIFGTSNGRRKRAWDRDCEIEFWKYRCMRASKPEKVETLKSVLDLLRKSSENPESERAPECQAKNPILSRLYIADTSVFPRKEDVKPFSEQTKQNNPSAKGPNQSVDDKTIKATEVNNLLSMTKVCLSEKKVDKIVRGPAGKVQLSSHSGGASVSSSAGAKVGTKESGLKSDSVKGDKRKWALEVLARKTAVASKNTANESQEDDAIFKGNYPLLAQLPTDMRPVLAPCRHNKIPVSVRQTQLYRLTERLLKNTNLPIIRRTADTELAVADAINIEKEVADRSKSKLVYLNFCSQELLHRTNNTKSNINTDTTLPTSSSPVQTDQSELNTDDLLTDPAVQIALKNAGLFSDSPPSSPHKNNEICNEKEVSGPDDILELESHPELDIFGDFEYDLEDDDYIGASVTKIPNLKEEQSESKVKLVFSTTSLKKTNNALDSADCKGSENNEVPGGASCSPNCHRDAVQKDSTINAEIGQPSVSSGLLPCEGAVDPVDSEFEDLYGPDKEPLIKKFPDGELQSLHGEGKTETQCENNDCHKEEERDLDKAVNGAEVGNENLTENVEAYIKEHIRPLCKSGVITAEQYRWAVAKTTEKVMKYHCKSKNANFLIKEGEKVKKLAEQYVGTAQQNRKS*