Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707500 | XP_003630686.1 | 98.431 | 510 | 8 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1030 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707500 | sp|P29677|MPPA_SOLTU | 73.137 | 510 | 131 | 2 | 1 | 510 | 1 | 504 | 0.0 | 746 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707500 | G7L7C9 | 98.431 | 510 | 8 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1030 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0707500 | Msa1450990 | 0.905105 | 6.098446e-80 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707500 | MtrunA17_Chr8g0389651 | 98.431 | 510 | 8 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1030 |
| Msa0707500 | MtrunA17_Chr8g0340831 | 71.176 | 510 | 144 | 1 | 1 | 510 | 1 | 507 | 0.0 | 724 |
| Msa0707500 | MtrunA17_Chr7g0234701 | 32.071 | 449 | 278 | 16 | 69 | 500 | 82 | 520 | 5.59e-61 | 209 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707500 | AT1G51980.1 | 65.551 | 508 | 170 | 4 | 1 | 508 | 1 | 503 | 0.0 | 645 |
| Msa0707500 | AT3G16480.1 | 68.874 | 453 | 139 | 2 | 56 | 508 | 49 | 499 | 0.0 | 620 |
| Msa0707500 | AT1G51980.2 | 65.275 | 455 | 153 | 4 | 1 | 455 | 1 | 450 | 0.0 | 568 |
| Msa0707500 | AT3G02090.1 | 31.377 | 443 | 279 | 14 | 80 | 510 | 96 | 525 | 6.83e-58 | 201 |
| Msa0707500 | AT3G02090.2 | 32.126 | 414 | 261 | 12 | 80 | 482 | 96 | 500 | 4.58e-56 | 196 |
Find 140 sgRNAs with CRISPR-Local
Find 493 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACCTGTGTATACTGATTT+TGG | 0.186959 | 4_4:-80804564 | None:intergenic |
| TCTGCTTTAGGTGGTTTATT+TGG | 0.229094 | 4_4:+80802392 | Msa0707500:CDS |
| CTTCACGCCTTAGAGCTTTC+AGG | 0.230620 | 4_4:+80802003 | Msa0707500:CDS |
| CCTCTAGATTTCCCACTTCC+TGG | 0.252710 | 4_4:+80802449 | Msa0707500:CDS |
| ATTCTCACAGTTGCCACTTC+TGG | 0.252866 | 4_4:+80808050 | Msa0707500:CDS |
| TATGAGACCCCATTAACTTT+TGG | 0.282250 | 4_4:+80802765 | Msa0707500:CDS |
| GCTCTGGCATTTGAACTTCC+TGG | 0.297177 | 4_4:+80804732 | Msa0707500:CDS |
| CACAATCATTAAATTTCATT+TGG | 0.300256 | 4_4:+80809016 | Msa0707500:three_prime_UTR |
| ACAAGCAACTCCACCATTTC+AGG | 0.304283 | 4_4:-80802945 | None:intergenic |
| TTTAGGCTCGTTCGTGCAAT+AGG | 0.306233 | 4_4:+80802312 | Msa0707500:intron |
| TCAGCAGTAAATAGACTAAA+TGG | 0.315220 | 4_4:+80804273 | Msa0707500:CDS |
| CGAATAGTACTTGCAGCTTC+TGG | 0.330623 | 4_4:+80804465 | Msa0707500:CDS |
| GGATTCCAAATTCATCAAAA+TGG | 0.331765 | 4_4:-80808223 | None:intergenic |
| AAACAATCCTCGTCTGCTTT+AGG | 0.338691 | 4_4:+80802380 | Msa0707500:CDS |
| TTACATAATTCAGATGCTAT+TGG | 0.340743 | 4_4:+80804943 | Msa0707500:intron |
| GTTCAAATGCCAGAGCAAAA+TGG | 0.340749 | 4_4:-80804725 | None:intergenic |
| TACATAATTCAGATGCTATT+GGG | 0.340761 | 4_4:+80804944 | Msa0707500:intron |
| AGAACTTGAACTTGCAAATC+TGG | 0.344149 | 4_4:-80802348 | None:intergenic |
| GAGGCGACTTTAACTCCATT+TGG | 0.349938 | 4_4:-80802536 | None:intergenic |
| TATCGTTGTCAAAGTGAAAC+AGG | 0.356292 | 4_4:+80804591 | Msa0707500:CDS |
| GAGTTAAATAAATATATATA+TGG | 0.365713 | 4_4:+80809124 | Msa0707500:three_prime_UTR |
| GGAACCCTGCGTTTCTTGAT+TGG | 0.370363 | 4_4:+80802979 | Msa0707500:CDS |
| CTCAGCTTCTAGAGAGCAAA+TGG | 0.370717 | 4_4:+80802890 | Msa0707500:CDS |
| CTTTAGGTGGTTTATTTGGA+TGG | 0.371121 | 4_4:+80802396 | Msa0707500:CDS |
| GTGTAGCCCCAAAAGTTAAT+GGG | 0.373375 | 4_4:-80802773 | None:intergenic |
| TACTAACCCTGAAAGCTCTA+AGG | 0.383892 | 4_4:-80802010 | None:intergenic |
| TGTGTAGCCCCAAAAGTTAA+TGG | 0.385100 | 4_4:-80802774 | None:intergenic |
| GGCAGATTTCGTAGCTTGTT+TGG | 0.386723 | 4_4:-80808202 | None:intergenic |
| CAGTCTCCTGCTGCTTCAAT+AGG | 0.390652 | 4_4:+80802717 | Msa0707500:intron |
| CAGCTGGTGGGCCTGGTAAA+GGG | 0.394120 | 4_4:+80804984 | Msa0707500:CDS |
| GAACCCTGCGTTTCTTGATT+GGG | 0.398292 | 4_4:+80802980 | Msa0707500:CDS |
| TTCCCAGGCGCTACATGATC+AGG | 0.400517 | 4_4:-80802494 | None:intergenic |
| AGGCGACTTTAACTCCATTT+GGG | 0.408007 | 4_4:-80802535 | None:intergenic |
| GTTCGGGAGGTGGAGGCAAT+TGG | 0.414574 | 4_4:+80802852 | Msa0707500:CDS |
| TCAGCTGGTGGGCCTGGTAA+AGG | 0.414881 | 4_4:+80804983 | Msa0707500:CDS |
| CCTGTTTACAGTGGTCTTGA+AGG | 0.419039 | 4_4:-80802814 | None:intergenic |
| GAGCAATGCTGCATTATATT+CGG | 0.420496 | 4_4:+80809053 | Msa0707500:three_prime_UTR |
| AAACCCTCAAGACTTGCTAT+TGG | 0.423179 | 4_4:+80804191 | Msa0707500:CDS |
| TTCACGCCTTAGAGCTTTCA+GGG | 0.423821 | 4_4:+80802004 | Msa0707500:CDS |
| TTCAAATGCCAGAGCAAAAT+GGG | 0.424354 | 4_4:-80804724 | None:intergenic |
| CTGCTCACTGATTCGTAGCT+TGG | 0.426370 | 4_4:-80808822 | None:intergenic |
| TTGGAGGCAATTCATTCTGC+TGG | 0.430435 | 4_4:+80804210 | Msa0707500:CDS |
| TCATTCTCAGCTGGTGGGCC+TGG | 0.430849 | 4_4:+80804977 | Msa0707500:CDS |
| AACAATATTTACAATAATAC+CGG | 0.433486 | 4_4:+80805356 | Msa0707500:CDS |
| CATTTGAACTTCCTGGCGGC+TGG | 0.435621 | 4_4:+80804739 | Msa0707500:CDS |
| GCTTTCGTTTGCAGTTGATC+AGG | 0.443499 | 4_4:+80808164 | Msa0707500:intron |
| ACGTGGAACACTGGGTAAAT+CGG | 0.446147 | 4_4:-80804532 | None:intergenic |
| CCTTCAAGACCACTGTAAAC+AGG | 0.448500 | 4_4:+80802814 | Msa0707500:CDS |
| TGGCGGCTGGCATAACTTGA+AGG | 0.449075 | 4_4:+80804752 | Msa0707500:CDS |
| TCCACAAGTTCATTCGATAT+CGG | 0.450885 | 4_4:+80805328 | Msa0707500:CDS |
| GAAGACCTATGTTCCTGAAA+TGG | 0.455623 | 4_4:+80802932 | Msa0707500:CDS |
| TTGCCTGATCATGTAGCGCC+TGG | 0.456505 | 4_4:+80802491 | Msa0707500:CDS |
| ATGGTTGTTTCAGAAGATAT+AGG | 0.461616 | 4_4:+80808445 | Msa0707500:CDS |
| CCTCCAATAGCAAGTCTTGA+GGG | 0.463091 | 4_4:-80804194 | None:intergenic |
| CCTCTCACAATGGCATCATA+TGG | 0.464688 | 4_4:+80808701 | Msa0707500:CDS |
| CTGAAAGTGAAGGCTGAGAT+TGG | 0.468579 | 4_4:+80804156 | Msa0707500:CDS |
| GACAGAAGAAGTGGATGATC+CGG | 0.481212 | 4_4:-80802423 | None:intergenic |
| GGGCTACACATTTGCTCGAA+CGG | 0.481223 | 4_4:+80802787 | Msa0707500:CDS |
| TCGTGTGGTTCGGGAGGTGG+AGG | 0.481573 | 4_4:+80802845 | Msa0707500:CDS |
| CTCATTAGCTGCAATATCAA+TGG | 0.483463 | 4_4:-80808027 | None:intergenic |
| ATTTGGGAGCGTAGTAATAA+CGG | 0.488694 | 4_4:-80802519 | None:intergenic |
| GGCAATTGGTGGCAATGTGC+AGG | 0.489712 | 4_4:+80802866 | Msa0707500:CDS |
| CTCTTCAGGACGTGGAACAC+TGG | 0.491349 | 4_4:-80804541 | None:intergenic |
| CGCGAATACATCCCTTTACC+AGG | 0.496570 | 4_4:-80804995 | None:intergenic |
| CCCTCAAGACTTGCTATTGG+AGG | 0.497371 | 4_4:+80804194 | Msa0707500:CDS |
| AAATATGACATGGTCGTACA+TGG | 0.503648 | 4_4:-80809086 | None:intergenic |
| TAAATTTATTGACAACAAGA+AGG | 0.504189 | 4_4:-80808946 | None:intergenic |
| GTTATTACTACGCTCCCAAA+TGG | 0.506094 | 4_4:+80802521 | Msa0707500:CDS |
| CCCTGCGTTTCTTGATTGGG+AGG | 0.507845 | 4_4:+80802983 | Msa0707500:CDS |
| TTAGGCTCGTTCGTGCAATA+GGG | 0.512338 | 4_4:+80802313 | Msa0707500:intron |
| GGTGGATCATTCTCAGCTGG+TGG | 0.512878 | 4_4:+80804971 | Msa0707500:CDS |
| GGAAGTGTAACACCAGGAAG+TGG | 0.514628 | 4_4:-80802461 | None:intergenic |
| CGGGAGGTGGAGGCAATTGG+TGG | 0.515419 | 4_4:+80802855 | Msa0707500:CDS |
| GGTTTATTTGGATGGCTCAC+CGG | 0.515600 | 4_4:+80802404 | Msa0707500:CDS |
| GGCGGTGGATCATTCTCAGC+TGG | 0.517181 | 4_4:+80804968 | Msa0707500:CDS |
| GCATAACTTGAAGGATGCTA+TGG | 0.518450 | 4_4:+80804761 | Msa0707500:CDS |
| GAAGCTGCAAGTACTATTCG+AGG | 0.520541 | 4_4:-80804462 | None:intergenic |
| TGAAGAAACGTTCCTGTACA+TGG | 0.522192 | 4_4:-80801985 | None:intergenic |
| GCTGATTCTGAAGCTAAAAG+AGG | 0.522365 | 4_4:-80804255 | None:intergenic |
| ACATGATCAGGCAATGGAGC+GGG | 0.525018 | 4_4:-80802482 | None:intergenic |
| TTCAAGTTATGCCAGCCGCC+AGG | 0.525656 | 4_4:-80804750 | None:intergenic |
| TAAATCGGACAAAAGAGGTT+CGG | 0.527264 | 4_4:-80804517 | None:intergenic |
| TGATTGGGAGGTCAATGAGC+AGG | 0.535046 | 4_4:+80802995 | Msa0707500:CDS |
| GCCGATATCGAATGAACTTG+TGG | 0.536829 | 4_4:-80805329 | None:intergenic |
| TCGATTCATTCACCATGTAC+AGG | 0.537766 | 4_4:+80801973 | Msa0707500:exon |
| AGGGACTTACTGTTGTGACT+TGG | 0.538586 | 4_4:-80805391 | None:intergenic |
| TATAGACCTATTGAAGCAGC+AGG | 0.539149 | 4_4:-80802723 | None:intergenic |
| AGCAGACGAGGATTGTTTCG+AGG | 0.541779 | 4_4:-80802375 | None:intergenic |
| TACACATTTGCTCGAACGGA+TGG | 0.542154 | 4_4:+80802791 | Msa0707500:CDS |
| CTGGTAAAGGGATGTATTCG+CGG | 0.542817 | 4_4:+80804996 | Msa0707500:CDS |
| CAATGTACCTTGTCCAGAAG+TGG | 0.546813 | 4_4:-80808063 | None:intergenic |
| GTGGATCATTCTCAGCTGGT+GGG | 0.548891 | 4_4:+80804972 | Msa0707500:CDS |
| CAATCCTCGTCTGCTTTAGG+TGG | 0.549840 | 4_4:+80802383 | Msa0707500:CDS |
| AGTGGACGAAGTAACTTTGA+AGG | 0.562537 | 4_4:+80808643 | Msa0707500:CDS |
| CTTGCAAATCTGGTAGTGGC+AGG | 0.563200 | 4_4:-80802338 | None:intergenic |
| TCTTCAGGACGTGGAACACT+GGG | 0.569641 | 4_4:-80804540 | None:intergenic |
| TGAACTTGCAAATCTGGTAG+TGG | 0.570423 | 4_4:-80802342 | None:intergenic |
| TATGTAGCTTCTGAAAGTGA+AGG | 0.570547 | 4_4:+80804146 | Msa0707500:intron |
| GCCTCCAATAGCAAGTCTTG+AGG | 0.576645 | 4_4:-80804195 | None:intergenic |
| CATTTCGTCACCTCTCACAA+TGG | 0.577598 | 4_4:+80808691 | Msa0707500:CDS |
| CTCCACCATTTCAGGAACAT+AGG | 0.580519 | 4_4:-80802937 | None:intergenic |
| ACCTCCCAATCAAGAAACGC+AGG | 0.581477 | 4_4:-80802984 | None:intergenic |
| CTGGGTAAATCGGACAAAAG+AGG | 0.582618 | 4_4:-80804522 | None:intergenic |
| CAGATGCTATTGGGAGGCGG+TGG | 0.582698 | 4_4:+80804953 | Msa0707500:intron |
| AGCTTCTGGTGTTGAGCATG+AGG | 0.584438 | 4_4:+80804479 | Msa0707500:CDS |
| TAGAGGTGGGACAGAAGAAG+TGG | 0.588518 | 4_4:-80802432 | None:intergenic |
| GGCGCTACATGATCAGGCAA+TGG | 0.589582 | 4_4:-80802488 | None:intergenic |
| TGCCTGATCATGTAGCGCCT+GGG | 0.591064 | 4_4:+80802492 | Msa0707500:CDS |
| GGACAAAAGAGGTTCGGCAA+TGG | 0.592591 | 4_4:-80804511 | None:intergenic |
| ACAATGGCATCATATGGAGA+TGG | 0.608918 | 4_4:+80808707 | Msa0707500:CDS |
| TCATACCGGTGATGTTTCAG+AGG | 0.611414 | 4_4:-80802555 | None:intergenic |
| ACAGTTGCCACTTCTGGACA+AGG | 0.624060 | 4_4:+80808056 | Msa0707500:CDS |
| GATAATCAAGACCTGAAGAA+CGG | 0.625024 | 4_4:-80804790 | None:intergenic |
| TCAGCTTCTAGAGAGCAAAT+GGG | 0.627001 | 4_4:+80802891 | Msa0707500:CDS |
| GGAAGTGGGAAATCTAGAGG+TGG | 0.628061 | 4_4:-80802446 | None:intergenic |
| CATTTGCTCTCTAGAAGCTG+AGG | 0.630139 | 4_4:-80802889 | None:intergenic |
| CCAGGAAGTGGGAAATCTAG+AGG | 0.630653 | 4_4:-80802449 | None:intergenic |
| ATTCAGATGCTATTGGGAGG+CGG | 0.630948 | 4_4:+80804950 | Msa0707500:intron |
| GACCTATGTTCCTGAAATGG+TGG | 0.631367 | 4_4:+80802935 | Msa0707500:CDS |
| AGTCGCCTCTGAAACATCAC+CGG | 0.632879 | 4_4:+80802550 | Msa0707500:CDS |
| GAAGTGGGAAATCTAGAGGT+GGG | 0.637022 | 4_4:-80802445 | None:intergenic |
| AGTTGCTTGTTGATATTGTG+AGG | 0.637501 | 4_4:+80802958 | Msa0707500:CDS |
| ATCGTTGTCAAAGTGAAACA+GGG | 0.638854 | 4_4:+80804592 | Msa0707500:CDS |
| TACATGATCAGGCAATGGAG+CGG | 0.640929 | 4_4:-80802483 | None:intergenic |
| CCATATGATGCCATTGTGAG+AGG | 0.648207 | 4_4:-80808701 | None:intergenic |
| AGCTAAAAGAGGATTAGCCA+AGG | 0.651532 | 4_4:-80804244 | None:intergenic |
| TGTAGCCCCAAAAGTTAATG+GGG | 0.658605 | 4_4:-80802772 | None:intergenic |
| GAAGTGTAACACCAGGAAGT+GGG | 0.664342 | 4_4:-80802460 | None:intergenic |
| GGAGCGGGAAGTGTAACACC+AGG | 0.669770 | 4_4:-80802467 | None:intergenic |
| GAGCCAAAATCAGTATACAC+AGG | 0.672733 | 4_4:+80804561 | Msa0707500:CDS |
| GTCCTTACTCAGGAAACCTG+TGG | 0.672973 | 4_4:+80808604 | Msa0707500:intron |
| CCTCCCAATCAAGAAACGCA+GGG | 0.677811 | 4_4:-80802983 | None:intergenic |
| ATAATTCAGATGCTATTGGG+AGG | 0.684827 | 4_4:+80804947 | Msa0707500:intron |
| TAAACCACCTAAAGCAGACG+AGG | 0.687764 | 4_4:-80802387 | None:intergenic |
| CCAAAATCAGTATACACAGG+TGG | 0.699521 | 4_4:+80804564 | Msa0707500:CDS |
| ATAGGTCTATATGTAGACTG+TGG | 0.700595 | 4_4:+80802735 | Msa0707500:CDS |
| ATTGATCAATAAATATGACA+TGG | 0.711264 | 4_4:-80809096 | None:intergenic |
| AAAATGACTCCTGTTTACAG+TGG | 0.720128 | 4_4:-80802823 | None:intergenic |
| TCGTTGTCAAAGTGAAACAG+GGG | 0.731053 | 4_4:+80804593 | Msa0707500:CDS |
| CTGGCATTTGAACTTCCTGG+CGG | 0.735748 | 4_4:+80804735 | Msa0707500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTTTTTTTTTAAAAA+TGG | - | chr4_4:80805101-80805120 | None:intergenic | 0.0% |
| !! | AAAAAAATAGAAAATATTTG+GGG | - | chr4_4:80802068-80802087 | None:intergenic | 10.0% |
| !!! | TAGATTTAAAATTTATCATA+AGG | + | chr4_4:80802219-80802238 | Msa0707500:intron | 10.0% |
| !!! | TACATATTTTATATTTCTTA+GGG | - | chr4_4:80805236-80805255 | None:intergenic | 10.0% |
| !!! | ATACATATTTTATATTTCTT+AGG | - | chr4_4:80805237-80805256 | None:intergenic | 10.0% |
| !! | AATGATAATTAAGAAATAAA+AGG | + | chr4_4:80806191-80806210 | Msa0707500:intron | 10.0% |
| !! | ATGATAATTAAGAAATAAAA+GGG | + | chr4_4:80806192-80806211 | Msa0707500:intron | 10.0% |
| !! | TTATTCTCATTTATATATTA+GGG | + | chr4_4:80807984-80808003 | Msa0707500:intron | 10.0% |
| !! | GAGTTAAATAAATATATATA+TGG | + | chr4_4:80809124-80809143 | Msa0707500:three_prime_UTR | 10.0% |
| !!! | ATCTAATTTTGTAAAATATC+AGG | + | chr4_4:80804425-80804444 | Msa0707500:intron | 15.0% |
| !!! | ACATATTTTATATTTCTTAG+GGG | - | chr4_4:80805235-80805254 | None:intergenic | 15.0% |
| !! | AACAATATTTACAATAATAC+CGG | + | chr4_4:80805356-80805375 | Msa0707500:CDS | 15.0% |
| !! | GAAATATTTATAATGAAGTA+TGG | + | chr4_4:80805942-80805961 | Msa0707500:intron | 15.0% |
| !! | AAATGATAATTAAGAAATAC+AGG | + | chr4_4:80806315-80806334 | Msa0707500:intron | 15.0% |
| !!! | AAACATCAATTTTTATTGAA+AGG | - | chr4_4:80806413-80806432 | None:intergenic | 15.0% |
| !!! | ATGTTTTTATACTTCTAAAT+CGG | + | chr4_4:80806427-80806446 | Msa0707500:intron | 15.0% |
| !! | TAACATGACAAAAAATATAA+TGG | + | chr4_4:80806468-80806487 | Msa0707500:intron | 15.0% |
| !!! | TTATTTTTCATTTAAACATC+TGG | + | chr4_4:80806621-80806640 | Msa0707500:intron | 15.0% |
| !!! | TATTTTTCATTTAAACATCT+GGG | + | chr4_4:80806622-80806641 | Msa0707500:intron | 15.0% |
| !! | GATAAAACTTGAAAAAAATT+AGG | + | chr4_4:80806715-80806734 | Msa0707500:intron | 15.0% |
| !!! | TTTAAAGAAATTTTAATTGG+TGG | + | chr4_4:80806752-80806771 | Msa0707500:intron | 15.0% |
| !!! | TTAAAGAAATTTTAATTGGT+GGG | + | chr4_4:80806753-80806772 | Msa0707500:intron | 15.0% |
| !! | AATTTAATCAATCAAATTTG+TGG | + | chr4_4:80806798-80806817 | Msa0707500:intron | 15.0% |
| !! | TTGTAACAATTAAAAATTTG+AGG | + | chr4_4:80807194-80807213 | Msa0707500:intron | 15.0% |
| !! | TGTAACAATTAAAAATTTGA+GGG | + | chr4_4:80807195-80807214 | Msa0707500:intron | 15.0% |
| !!! | CATAGTTTCTATTATATTTT+TGG | - | chr4_4:80807244-80807263 | None:intergenic | 15.0% |
| !! | ACTTGATAAAAAAAAAAAAG+TGG | + | chr4_4:80807501-80807520 | Msa0707500:intron | 15.0% |
| !! | CTTGATAAAAAAAAAAAAGT+GGG | + | chr4_4:80807502-80807521 | Msa0707500:intron | 15.0% |
| !!! | ATGTTTGTTTTTTTATTTCA+TGG | + | chr4_4:80807841-80807860 | Msa0707500:intron | 15.0% |
| !! | CTAATATATAAATGAGAATA+AGG | - | chr4_4:80807985-80808004 | None:intergenic | 15.0% |
| !! | CTTATTCTCATTTATATATT+AGG | + | chr4_4:80807983-80808002 | Msa0707500:intron | 15.0% |
| !! | GATTCATGAATTTGTATATA+GGG | - | chr4_4:80802104-80802123 | None:intergenic | 20.0% |
| !! | TGATTCATGAATTTGTATAT+AGG | - | chr4_4:80802105-80802124 | None:intergenic | 20.0% |
| !!! | TGTCTAATAGTTTTTTATTG+TGG | + | chr4_4:80802277-80802296 | Msa0707500:intron | 20.0% |
| !! | TAATATATCTCTTAGAATCA+TGG | - | chr4_4:80803274-80803293 | None:intergenic | 20.0% |
| !! | TAGATACTCTATAACTTTAT+CGG | + | chr4_4:80803916-80803935 | Msa0707500:intron | 20.0% |
| !!! | ATATCTCTATTTTTTCAGTT+AGG | + | chr4_4:80804656-80804675 | Msa0707500:intron | 20.0% |
| !!! | TATCTCTATTTTTTCAGTTA+GGG | + | chr4_4:80804657-80804676 | Msa0707500:intron | 20.0% |
| !! | AAATAATATGGAGTCATATA+CGG | - | chr4_4:80805162-80805181 | None:intergenic | 20.0% |
| !!! | CATATTTTATATTTCTTAGG+GGG | - | chr4_4:80805234-80805253 | None:intergenic | 20.0% |
| !! | TAATAAAAACAAGGATGTTA+AGG | - | chr4_4:80805279-80805298 | None:intergenic | 20.0% |
| !!! | AGATATTGGAATTTTTATGT+TGG | + | chr4_4:80805434-80805453 | Msa0707500:intron | 20.0% |
| !! | TAATCTAAATAAATGAACCA+CGG | - | chr4_4:80805703-80805722 | None:intergenic | 20.0% |
| !! | GTTACAATTATATAGTGTAT+AGG | + | chr4_4:80805773-80805792 | Msa0707500:intron | 20.0% |
| !!! | TTTTGCCTAAAAAAGTAAAT+AGG | + | chr4_4:80805881-80805900 | Msa0707500:intron | 20.0% |
| !! | TTTGCCTAAAAAAGTAAATA+GGG | + | chr4_4:80805882-80805901 | Msa0707500:intron | 20.0% |
| !! | AAATAAAATAATTCCAACCA+AGG | - | chr4_4:80806143-80806162 | None:intergenic | 20.0% |
| !! | CATGTATCACTAATATTTAA+AGG | + | chr4_4:80806166-80806185 | Msa0707500:intron | 20.0% |
| !!! | ATTTTGATTATGTGTGATTT+TGG | + | chr4_4:80806519-80806538 | Msa0707500:intron | 20.0% |
| !! | AAGAAAAACAAGAAAAATCA+AGG | - | chr4_4:80806589-80806608 | None:intergenic | 20.0% |
| !!! | GGGTTTAAAGAAATTTTAAT+TGG | + | chr4_4:80806749-80806768 | Msa0707500:intron | 20.0% |
| !!! | ACACACTATATTTTTTCAAT+TGG | - | chr4_4:80807327-80807346 | None:intergenic | 20.0% |
| !! | ATAAAAAAAAAAAAGTGGGA+AGG | + | chr4_4:80807506-80807525 | Msa0707500:intron | 20.0% |
| !!! | AAATAGTGTTAATTTTCACA+TGG | - | chr4_4:80807608-80807627 | None:intergenic | 20.0% |
| !! | AATCTATTGTCTAATATGTT+CGG | - | chr4_4:80807708-80807727 | None:intergenic | 20.0% |
| !!! | TTCAACTAATATTCTTTTAG+TGG | + | chr4_4:80807727-80807746 | Msa0707500:intron | 20.0% |
| !! | TAAATTTATTGACAACAAGA+AGG | - | chr4_4:80808949-80808968 | None:intergenic | 20.0% |
| !! | CACAATCATTAAATTTCATT+TGG | + | chr4_4:80809016-80809035 | Msa0707500:three_prime_UTR | 20.0% |
| !! | ATTGATCAATAAATATGACA+TGG | - | chr4_4:80809099-80809118 | None:intergenic | 20.0% |
| ! | AAAAAGGTTAACAGTCTAAT+AGG | + | chr4_4:80801871-80801890 | Msa0707500:five_prime_UTR | 25.0% |
| ! | AAAATAGAAAATATTTGGGG+AGG | - | chr4_4:80802065-80802084 | None:intergenic | 25.0% |
| !! | CAATTTTTCCTTAAAGCAAT+GGG | - | chr4_4:80803164-80803183 | None:intergenic | 25.0% |
| !! | ACAATTTTTCCTTAAAGCAA+TGG | - | chr4_4:80803165-80803184 | None:intergenic | 25.0% |
| !! | ACCATTTAAAGTTTAAACCA+CGG | - | chr4_4:80803747-80803766 | None:intergenic | 25.0% |
| ! | AAATGGTGATAGTTATTCTT+TGG | + | chr4_4:80803760-80803779 | Msa0707500:intron | 25.0% |
| ! | ATAACAGCAGAAAAATCAAA+AGG | - | chr4_4:80804112-80804131 | None:intergenic | 25.0% |
| ! | TTACATAATTCAGATGCTAT+TGG | + | chr4_4:80804943-80804962 | Msa0707500:intron | 25.0% |
| ! | TACATAATTCAGATGCTATT+GGG | + | chr4_4:80804944-80804963 | Msa0707500:intron | 25.0% |
| !! | TTAATGTATTCAGTCTTTTC+TGG | + | chr4_4:80805033-80805052 | Msa0707500:intron | 25.0% |
| ! | TTATATGTAACTGACTAACT+AGG | - | chr4_4:80805134-80805153 | None:intergenic | 25.0% |
| ! | AATAATATGGAGTCATATAC+GGG | - | chr4_4:80805161-80805180 | None:intergenic | 25.0% |
| ! | ATCTGCAAGTAATAAAAACA+AGG | - | chr4_4:80805288-80805307 | None:intergenic | 25.0% |
| ! | AATTCCAATATCTCCAATAT+GGG | - | chr4_4:80805427-80805446 | None:intergenic | 25.0% |
| ! | AAATTCCAATATCTCCAATA+TGG | - | chr4_4:80805428-80805447 | None:intergenic | 25.0% |
| ! | GTTACATTACCTATAAACAT+TGG | - | chr4_4:80805460-80805479 | None:intergenic | 25.0% |
| ! | GTTTATAGGTAATGTAACTA+AGG | + | chr4_4:80805462-80805481 | Msa0707500:intron | 25.0% |
| !!! | ATGTCCCTATTTACTTTTTT+AGG | - | chr4_4:80805889-80805908 | None:intergenic | 25.0% |
| ! | ATAATGAAGTATGGAAGAAA+TGG | + | chr4_4:80805951-80805970 | Msa0707500:intron | 25.0% |
| ! | TTTACCTCTTGTGTAAAATA+GGG | - | chr4_4:80806297-80806316 | None:intergenic | 25.0% |
| !! | TTTTACCTCTTGTGTAAAAT+AGG | - | chr4_4:80806298-80806317 | None:intergenic | 25.0% |
| ! | ACAGGCAAATAAATCAAAAT+TGG | + | chr4_4:80806333-80806352 | Msa0707500:intron | 25.0% |
| !! | ATTGAAAAGTGTAGCATTTA+AGG | + | chr4_4:80806364-80806383 | Msa0707500:intron | 25.0% |
| !!! | TGGCTTATTTTTTACTCTTT+TGG | + | chr4_4:80806488-80806507 | Msa0707500:intron | 25.0% |
| ! | CACACATAATCAAAATCAAA+GGG | - | chr4_4:80806515-80806534 | None:intergenic | 25.0% |
| ! | TCACACATAATCAAAATCAA+AGG | - | chr4_4:80806516-80806535 | None:intergenic | 25.0% |
| ! | AAAAATTAGGATGTGAGATT+AGG | + | chr4_4:80806728-80806747 | Msa0707500:intron | 25.0% |
| ! | AAAATTAGGATGTGAGATTA+GGG | + | chr4_4:80806729-80806748 | Msa0707500:intron | 25.0% |
| !!! | TTTTTTCAATTGGTCATATC+AGG | - | chr4_4:80807317-80807336 | None:intergenic | 25.0% |
| !!! | TTTTTTTAGTAGGTAAAACG+TGG | + | chr4_4:80807351-80807370 | Msa0707500:intron | 25.0% |
| !!! | TTTTTTAGTAGGTAAAACGT+GGG | + | chr4_4:80807352-80807371 | Msa0707500:intron | 25.0% |
| !!! | TTTTTTATCAAGTAGCTTAG+TGG | - | chr4_4:80807494-80807513 | None:intergenic | 25.0% |
| !! | TTTTGGACAAGAAAAAACTT+CGG | - | chr4_4:80807660-80807679 | None:intergenic | 25.0% |
| !! | ATACAGAAAGGATCAAATTT+TGG | - | chr4_4:80807677-80807696 | None:intergenic | 25.0% |
| ! | TTTGTTAGTTACAGATATGA+TGG | - | chr4_4:80807760-80807779 | None:intergenic | 25.0% |
| ! | CTTGATTATCACGTTTAAAT+TGG | + | chr4_4:80808113-80808132 | Msa0707500:intron | 25.0% |
| ! | AAGTAAACATTCATTTGAGA+TGG | - | chr4_4:80808262-80808281 | None:intergenic | 25.0% |
| ! | ATCTCAAATGAATGTTTACT+TGG | + | chr4_4:80808261-80808280 | Msa0707500:intron | 25.0% |
| !! | TTATTACTATCTGATTCGTA+CGG | + | chr4_4:80808404-80808423 | Msa0707500:intron | 25.0% |
| ! | TTTGCTGATTACTGCTATAT+AGG | + | chr4_4:80802127-80802146 | Msa0707500:intron | 30.0% |
| TCGATATCATTTGATTAGCA+TGG | + | chr4_4:80802174-80802193 | Msa0707500:intron | 30.0% | |
| TGTGGTTAATCAATGAGTTT+AGG | + | chr4_4:80802295-80802314 | Msa0707500:intron | 30.0% | |
| ! | CTAAAAGTGACAATCTGTTT+TGG | - | chr4_4:80802652-80802671 | None:intergenic | 30.0% |
| ACCTTTCATGAATCTTTATG+AGG | + | chr4_4:80803019-80803038 | Msa0707500:intron | 30.0% | |
| TCCTCATAAAGATTCATGAA+AGG | - | chr4_4:80803023-80803042 | None:intergenic | 30.0% | |
| ATAAGAGTTGAATGCAACAT+TGG | + | chr4_4:80803207-80803226 | Msa0707500:intron | 30.0% | |
| CATAAATGAAACGTAGCTAT+AGG | + | chr4_4:80803331-80803350 | Msa0707500:intron | 30.0% | |
| ! | CATTCATGTAGATTCTTTTG+GGG | - | chr4_4:80803360-80803379 | None:intergenic | 30.0% |
| ! | GCATTCATGTAGATTCTTTT+GGG | - | chr4_4:80803361-80803380 | None:intergenic | 30.0% |
| ! | TGCATTCATGTAGATTCTTT+TGG | - | chr4_4:80803362-80803381 | None:intergenic | 30.0% |
| TGTGTGATAGTAAAACCTAA+TGG | + | chr4_4:80803382-80803401 | Msa0707500:intron | 30.0% | |
| GTGTGATAGTAAAACCTAAT+GGG | + | chr4_4:80803383-80803402 | Msa0707500:intron | 30.0% | |
| TGTGATAGTAAAACCTAATG+GGG | + | chr4_4:80803384-80803403 | Msa0707500:intron | 30.0% | |
| CATCACATAAACACACAAAT+AGG | - | chr4_4:80803632-80803651 | None:intergenic | 30.0% | |
| CTATTTGTGTGTTTATGTGA+TGG | + | chr4_4:80803630-80803649 | Msa0707500:intron | 30.0% | |
| TATGGGGTAATCAAACTAAA+GGG | - | chr4_4:80803707-80803726 | None:intergenic | 30.0% | |
| ACCGTGGTTTAAACTTTAAA+TGG | + | chr4_4:80803743-80803762 | Msa0707500:intron | 30.0% | |
| AATATGTTAGTAAGCAAGCA+TGG | + | chr4_4:80804006-80804025 | Msa0707500:intron | 30.0% | |
| TCAGAAGCTACATAAAATTG+TGG | - | chr4_4:80804140-80804159 | None:intergenic | 30.0% | |
| TCAGCAGTAAATAGACTAAA+TGG | + | chr4_4:80804273-80804292 | Msa0707500:CDS | 30.0% | |
| ! | GTCTTCTTTTCCATTTTGTA+TGG | + | chr4_4:80804821-80804840 | Msa0707500:intron | 30.0% |
| ! | TTCTTTTCCATTTTGTATGG+TGG | + | chr4_4:80804824-80804843 | Msa0707500:intron | 30.0% |
| TGACTCCATATTATTTGTGA+CGG | + | chr4_4:80805166-80805185 | Msa0707500:intron | 30.0% | |
| ! | TACAATAATACCGGCATTTT+TGG | + | chr4_4:80805365-80805384 | Msa0707500:CDS | 30.0% |
| CAATATGGGTAAGATTCAAA+GGG | - | chr4_4:80805413-80805432 | None:intergenic | 30.0% | |
| TTATGTTGGCCAATGTTTAT+AGG | + | chr4_4:80805448-80805467 | Msa0707500:intron | 30.0% | |
| GGTAATGTAACTAAGGAATA+AGG | + | chr4_4:80805469-80805488 | Msa0707500:intron | 30.0% | |
| AGCGATTGATGAATTATCTA+AGG | - | chr4_4:80805553-80805572 | None:intergenic | 30.0% | |
| CATCAATACTTGTGATTTGA+GGG | - | chr4_4:80805589-80805608 | None:intergenic | 30.0% | |
| TCATCAATACTTGTGATTTG+AGG | - | chr4_4:80805590-80805609 | None:intergenic | 30.0% | |
| ATTATATAGTGTATAGGAGC+TGG | + | chr4_4:80805779-80805798 | Msa0707500:intron | 30.0% | |
| TTTGTGACAGTATTCATAGA+AGG | - | chr4_4:80806055-80806074 | None:intergenic | 30.0% | |
| ! | CTTGAGAAGAGTATATAAAG+AGG | + | chr4_4:80806916-80806935 | Msa0707500:intron | 30.0% |
| TGATACCATGTTGAAATTTG+GGG | - | chr4_4:80806987-80807006 | None:intergenic | 30.0% | |
| CTGATACCATGTTGAAATTT+GGG | - | chr4_4:80806988-80807007 | None:intergenic | 30.0% | |
| TCTGATACCATGTTGAAATT+TGG | - | chr4_4:80806989-80807008 | None:intergenic | 30.0% | |
| CTTGAGAAGAGAATATAAAG+AGG | + | chr4_4:80807101-80807120 | Msa0707500:intron | 30.0% | |
| AATCCCTTCTGTTGAAATTT+GGG | - | chr4_4:80807173-80807192 | None:intergenic | 30.0% | |
| TACCAATTGAGATAAACTCA+CGG | - | chr4_4:80807388-80807407 | None:intergenic | 30.0% | |
| TGAGTTTATCTCAATTGGTA+GGG | + | chr4_4:80807388-80807407 | Msa0707500:intron | 30.0% | |
| TCCATTTATTCACCTTTAAG+AGG | + | chr4_4:80807457-80807476 | Msa0707500:intron | 30.0% | |
| ACCTCTTAAAGGTGAATAAA+TGG | - | chr4_4:80807461-80807480 | None:intergenic | 30.0% | |
| GGTGACAGGATAAAAATATA+AGG | - | chr4_4:80807639-80807658 | None:intergenic | 30.0% | |
| TCGGTTTAATACATACAGAA+AGG | - | chr4_4:80807689-80807708 | None:intergenic | 30.0% | |
| ! | TTAGTTACAGATATGATGGA+AGG | - | chr4_4:80807756-80807775 | None:intergenic | 30.0% |
| ACTAACTGCTATGTTTAGTT+AGG | + | chr4_4:80807779-80807798 | Msa0707500:intron | 30.0% | |
| CTAACTGCTATGTTTAGTTA+GGG | + | chr4_4:80807780-80807799 | Msa0707500:intron | 30.0% | |
| ATGTTTAGTTAGGGCAATTA+AGG | + | chr4_4:80807789-80807808 | Msa0707500:intron | 30.0% | |
| TGTTTAGTTAGGGCAATTAA+GGG | + | chr4_4:80807790-80807809 | Msa0707500:intron | 30.0% | |
| ! | TGTTTGTTACACTGATCAAA+GGG | - | chr4_4:80807822-80807841 | None:intergenic | 30.0% |
| ! | ATGTTTGTTACACTGATCAA+AGG | - | chr4_4:80807823-80807842 | None:intergenic | 30.0% |
| !!! | ATCTGCCATTTTGATGAATT+TGG | + | chr4_4:80808218-80808237 | Msa0707500:CDS | 30.0% |
| GGATTCCAAATTCATCAAAA+TGG | - | chr4_4:80808226-80808245 | None:intergenic | 30.0% | |
| ! | ATGGTTGTTTCAGAAGATAT+AGG | + | chr4_4:80808445-80808464 | Msa0707500:CDS | 30.0% |
| !! | AAGTTTTGACATATGGTGAA+AGG | + | chr4_4:80808473-80808492 | Msa0707500:CDS | 30.0% |
| !! | ATGTCATTCCAAAAAGTACT+TGG | + | chr4_4:80808508-80808527 | Msa0707500:intron | 30.0% |
| ! | AATAGCTTCCAAGTACTTTT+TGG | - | chr4_4:80808519-80808538 | None:intergenic | 30.0% |
| !!! | GCGTACATCTTGTTATTTTT+TGG | + | chr4_4:80808991-80809010 | Msa0707500:three_prime_UTR | 30.0% |
| !! | GCAGAGTTTGATTCGTTTTA+GGG | - | chr4_4:80801930-80801949 | None:intergenic | 35.0% |
| !! | AGCAGAGTTTGATTCGTTTT+AGG | - | chr4_4:80801931-80801950 | None:intergenic | 35.0% |
| AGAACTTGAACTTGCAAATC+TGG | - | chr4_4:80802351-80802370 | None:intergenic | 35.0% | |
| ! | TCTGCTTTAGGTGGTTTATT+TGG | + | chr4_4:80802392-80802411 | Msa0707500:CDS | 35.0% |
| CTTTAGGTGGTTTATTTGGA+TGG | + | chr4_4:80802396-80802415 | Msa0707500:CDS | 35.0% | |
| ! | ATTTGGGAGCGTAGTAATAA+CGG | - | chr4_4:80802522-80802541 | None:intergenic | 35.0% |
| GACCAACAGTTAATTCATAC+CGG | - | chr4_4:80802572-80802591 | None:intergenic | 35.0% | |
| ATAGGTCTATATGTAGACTG+TGG | + | chr4_4:80802735-80802754 | Msa0707500:CDS | 35.0% | |
| ! | TATGAGACCCCATTAACTTT+TGG | + | chr4_4:80802765-80802784 | Msa0707500:CDS | 35.0% |
| ! | ATGAGACCCCATTAACTTTT+GGG | + | chr4_4:80802766-80802785 | Msa0707500:CDS | 35.0% |
| AAAATGACTCCTGTTTACAG+TGG | - | chr4_4:80802826-80802845 | None:intergenic | 35.0% | |
| ! | AGTTGCTTGTTGATATTGTG+AGG | + | chr4_4:80802958-80802977 | Msa0707500:CDS | 35.0% |
| ! | TACTGTCTTTTGGCATTTTG+GGG | - | chr4_4:80803134-80803153 | None:intergenic | 35.0% |
| ! | CTACTGTCTTTTGGCATTTT+GGG | - | chr4_4:80803135-80803154 | None:intergenic | 35.0% |
| ! | TTTCCTTAAAGCAATGGGTT+TGG | - | chr4_4:80803159-80803178 | None:intergenic | 35.0% |
| AAATGAAACGTAGCTATAGG+AGG | + | chr4_4:80803334-80803353 | Msa0707500:intron | 35.0% | |
| CAATTAAGCAAGAAAACACC+GGG | - | chr4_4:80803550-80803569 | None:intergenic | 35.0% | |
| CCAATTAAGCAAGAAAACAC+CGG | - | chr4_4:80803551-80803570 | None:intergenic | 35.0% | |
| !! | TGTTTATGTGATGGTGTTGT+TGG | + | chr4_4:80803639-80803658 | Msa0707500:intron | 35.0% |
| !! | GTTTATGTGATGGTGTTGTT+GGG | + | chr4_4:80803640-80803659 | Msa0707500:intron | 35.0% |
| !!! | TGGTGTTGTTGGGTTTTATT+TGG | + | chr4_4:80803650-80803669 | Msa0707500:intron | 35.0% |
| ! | ACTAAAGGGTAATTTGAGAC+AGG | - | chr4_4:80803693-80803712 | None:intergenic | 35.0% |
| CTATGGGGTAATCAAACTAA+AGG | - | chr4_4:80803708-80803727 | None:intergenic | 35.0% | |
| TAGTTTGATTACCCCATAGA+TGG | + | chr4_4:80803709-80803728 | Msa0707500:intron | 35.0% | |
| AGTTTGATTACCCCATAGAT+GGG | + | chr4_4:80803710-80803729 | Msa0707500:intron | 35.0% | |
| TAAGCAAGCATGGTTCATAT+GGG | + | chr4_4:80804016-80804035 | Msa0707500:intron | 35.0% | |
| !! | TATGGGTGGTGTTGTATAAA+AGG | + | chr4_4:80804033-80804052 | Msa0707500:intron | 35.0% |
| ACAAATGTTAAGCATCAGGA+AGG | - | chr4_4:80804084-80804103 | None:intergenic | 35.0% | |
| ! | TATGTAGCTTCTGAAAGTGA+AGG | + | chr4_4:80804146-80804165 | Msa0707500:intron | 35.0% |
| !!! | ATTCATTCTGCTGGTTTTTC+TGG | + | chr4_4:80804219-80804238 | Msa0707500:CDS | 35.0% |
| TAAATCGGACAAAAGAGGTT+CGG | - | chr4_4:80804520-80804539 | None:intergenic | 35.0% | |
| !!! | TATACTGATTTTGGCTCTTC+AGG | - | chr4_4:80804558-80804577 | None:intergenic | 35.0% |
| TATCGTTGTCAAAGTGAAAC+AGG | + | chr4_4:80804591-80804610 | Msa0707500:CDS | 35.0% | |
| ATCGTTGTCAAAGTGAAACA+GGG | + | chr4_4:80804592-80804611 | Msa0707500:CDS | 35.0% | |
| ATGTTAGACTTGACAAATGC+TGG | - | chr4_4:80804685-80804704 | None:intergenic | 35.0% | |
| AACATTCCTTTAATTGCCAG+AGG | + | chr4_4:80804700-80804719 | Msa0707500:intron | 35.0% | |
| TTCAAATGCCAGAGCAAAAT+GGG | - | chr4_4:80804727-80804746 | None:intergenic | 35.0% | |
| GATAATCAAGACCTGAAGAA+CGG | - | chr4_4:80804793-80804812 | None:intergenic | 35.0% | |
| TTTCAAGCCACCATACAAAA+TGG | - | chr4_4:80804834-80804853 | None:intergenic | 35.0% | |
| TTTGTATGGTGGCTTGAAAT+AGG | + | chr4_4:80804835-80804854 | Msa0707500:intron | 35.0% | |
| GCTTGAAATAGGTTCAAGAA+TGG | + | chr4_4:80804846-80804865 | Msa0707500:intron | 35.0% | |
| ATAATTCAGATGCTATTGGG+AGG | + | chr4_4:80804947-80804966 | Msa0707500:intron | 35.0% | |
| CCAAACCGTCACAAATAATA+TGG | - | chr4_4:80805174-80805193 | None:intergenic | 35.0% | |
| CCATATTATTTGTGACGGTT+TGG | + | chr4_4:80805171-80805190 | Msa0707500:intron | 35.0% | |
| TCCACAAGTTCATTCGATAT+CGG | + | chr4_4:80805328-80805347 | Msa0707500:CDS | 35.0% | |
| CCAATATGGGTAAGATTCAA+AGG | - | chr4_4:80805414-80805433 | None:intergenic | 35.0% | |
| CCTTTGAATCTTACCCATAT+TGG | + | chr4_4:80805411-80805430 | Msa0707500:intron | 35.0% | |
| CTTACCCATATTGGAGATAT+TGG | + | chr4_4:80805420-80805439 | Msa0707500:intron | 35.0% | |
| TAAGAAATAAAAGGGCAACC+CGG | + | chr4_4:80806200-80806219 | Msa0707500:intron | 35.0% | |
| TGTACAATACACCAAATGGT+GGG | - | chr4_4:80806266-80806285 | None:intergenic | 35.0% | |
| CTCTTGTGTAAAATAGGGTA+AGG | - | chr4_4:80806292-80806311 | None:intergenic | 35.0% | |
| ! | CTTACCCTATTTTACACAAG+AGG | + | chr4_4:80806290-80806309 | Msa0707500:intron | 35.0% |
| !! | TATGTGTGATTTTGGCACTT+TGG | + | chr4_4:80806527-80806546 | Msa0707500:intron | 35.0% |
| !! | TGATTTTGGCACTTTGGTTT+TGG | + | chr4_4:80806533-80806552 | Msa0707500:intron | 35.0% |
| TCATTTAAACATCTGGGTCT+TGG | + | chr4_4:80806628-80806647 | Msa0707500:intron | 35.0% | |
| ! | GAGAAGAGTATATAAAGAGG+AGG | + | chr4_4:80806919-80806938 | Msa0707500:intron | 35.0% |
| CTAACTCATCCTTACAAAAC+CGG | - | chr4_4:80806963-80806982 | None:intergenic | 35.0% | |
| GAGAAGAGAATATAAAGAGG+AGG | + | chr4_4:80807104-80807123 | Msa0707500:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr4_4:80806963-80806982 | None:intergenic | 35.0% | |
| ATCCCTTCTGTTGAAATTTG+GGG | - | chr4_4:80807172-80807191 | None:intergenic | 35.0% | |
| CAATCCCTTCTGTTGAAATT+TGG | - | chr4_4:80807174-80807193 | None:intergenic | 35.0% | |
| !!! | GTGTGTGCACTTTTTTTAGT+AGG | + | chr4_4:80807341-80807360 | Msa0707500:intron | 35.0% |
| ACCAATTGAGATAAACTCAC+GGG | - | chr4_4:80807387-80807406 | None:intergenic | 35.0% | |
| GTGAGTTTATCTCAATTGGT+AGG | + | chr4_4:80807387-80807406 | Msa0707500:intron | 35.0% | |
| AGGTGAATAAATGGAGTGTA+CGG | - | chr4_4:80807452-80807471 | None:intergenic | 35.0% | |
| GCTAGAAATTCACCTCTTAA+AGG | - | chr4_4:80807472-80807491 | None:intergenic | 35.0% | |
| TTCTCGTTCATGTACAGAAA+AGG | - | chr4_4:80807560-80807579 | None:intergenic | 35.0% | |
| AGATGGATATACAAGCTCAA+TGG | - | chr4_4:80807882-80807901 | None:intergenic | 35.0% | |
| CTAATAAAAGACTCTGCAGA+CGG | - | chr4_4:80807935-80807954 | None:intergenic | 35.0% | |
| CTCATTAGCTGCAATATCAA+TGG | - | chr4_4:80808030-80808049 | None:intergenic | 35.0% | |
| AAAGACTTAATGTGACTGGA+AGG | - | chr4_4:80808142-80808161 | None:intergenic | 35.0% | |
| ! | TCCAGTCACATTAAGTCTTT+TGG | + | chr4_4:80808142-80808161 | Msa0707500:intron | 35.0% |
| ! | TGAGATGGATTTACATACTC+TGG | - | chr4_4:80808247-80808266 | None:intergenic | 35.0% |
| ! | GTACTTGATGTGTTTTCAGA+TGG | + | chr4_4:80808426-80808445 | Msa0707500:intron | 35.0% |
| !! | GGAAGACAAGTTTTGACATA+TGG | + | chr4_4:80808466-80808485 | Msa0707500:CDS | 35.0% |
| ACCAAAAATTGTCCTTACTC+AGG | + | chr4_4:80808594-80808613 | Msa0707500:intron | 35.0% | |
| ! | TCCTGAGTAAGGACAATTTT+TGG | - | chr4_4:80808598-80808617 | None:intergenic | 35.0% |
| GCTTTCAAAAAATCTTCCAC+AGG | - | chr4_4:80808623-80808642 | None:intergenic | 35.0% | |
| !!! | GGAAGATTTTTTGAAAGCAG+TGG | + | chr4_4:80808625-80808644 | Msa0707500:CDS | 35.0% |
| ! | GTCTACAGTCTCATTTTGAA+CGG | - | chr4_4:80808854-80808873 | None:intergenic | 35.0% |
| GAGCAATGCTGCATTATATT+CGG | + | chr4_4:80809053-80809072 | Msa0707500:three_prime_UTR | 35.0% | |
| AAATATGACATGGTCGTACA+TGG | - | chr4_4:80809089-80809108 | None:intergenic | 35.0% | |
| !!! | GAGTTTGATTCGTTTTAGGG+CGG | - | chr4_4:80801927-80801946 | None:intergenic | 40.0% |
| TCGATTCATTCACCATGTAC+AGG | + | chr4_4:80801973-80801992 | Msa0707500:exon | 40.0% | |
| TGAAGAAACGTTCCTGTACA+TGG | - | chr4_4:80801988-80802007 | None:intergenic | 40.0% | |
| TACTAACCCTGAAAGCTCTA+AGG | - | chr4_4:80802013-80802032 | None:intergenic | 40.0% | |
| TGAACTTGCAAATCTGGTAG+TGG | - | chr4_4:80802345-80802364 | None:intergenic | 40.0% | |
| AAACAATCCTCGTCTGCTTT+AGG | + | chr4_4:80802380-80802399 | Msa0707500:CDS | 40.0% | |
| ! | GTAGTAATAACGGTTTTCCC+AGG | - | chr4_4:80802512-80802531 | None:intergenic | 40.0% |
| GTTATTACTACGCTCCCAAA+TGG | + | chr4_4:80802521-80802540 | Msa0707500:CDS | 40.0% | |
| AGGCGACTTTAACTCCATTT+GGG | - | chr4_4:80802538-80802557 | None:intergenic | 40.0% | |
| CACCGGTATGAATTAACTGT+TGG | + | chr4_4:80802567-80802586 | Msa0707500:intron | 40.0% | |
| TATAGACCTATTGAAGCAGC+AGG | - | chr4_4:80802726-80802745 | None:intergenic | 40.0% | |
| ! | TGAGACCCCATTAACTTTTG+GGG | + | chr4_4:80802767-80802786 | Msa0707500:CDS | 40.0% |
| TGTAGCCCCAAAAGTTAATG+GGG | - | chr4_4:80802775-80802794 | None:intergenic | 40.0% | |
| GTGTAGCCCCAAAAGTTAAT+GGG | - | chr4_4:80802776-80802795 | None:intergenic | 40.0% | |
| TGTGTAGCCCCAAAAGTTAA+TGG | - | chr4_4:80802777-80802796 | None:intergenic | 40.0% | |
| !! | AAACAGGAGTCATTTTCGTG+TGG | + | chr4_4:80802830-80802849 | Msa0707500:CDS | 40.0% |
| ! | TCAGCTTCTAGAGAGCAAAT+GGG | + | chr4_4:80802891-80802910 | Msa0707500:CDS | 40.0% |
| GAAGACCTATGTTCCTGAAA+TGG | + | chr4_4:80802932-80802951 | Msa0707500:CDS | 40.0% | |
| !! | ACAACTCAGAGTATTGCTGT+TGG | + | chr4_4:80803075-80803094 | Msa0707500:intron | 40.0% |
| ! | GGAAAGTGTAAGTTGTCTTG+AGG | + | chr4_4:80803102-80803121 | Msa0707500:intron | 40.0% |
| ! | CCTACTGTCTTTTGGCATTT+TGG | - | chr4_4:80803136-80803155 | None:intergenic | 40.0% |
| CCAAAATGCCAAAAGACAGT+AGG | + | chr4_4:80803133-80803152 | Msa0707500:intron | 40.0% | |
| TAGTAAAACCTAATGGGGAC+TGG | + | chr4_4:80803389-80803408 | Msa0707500:intron | 40.0% | |
| GGACAAAATATGGCTGACAA+AGG | - | chr4_4:80803529-80803548 | None:intergenic | 40.0% | |
| ! | TTGTCAGCCATATTTTGTCC+CGG | + | chr4_4:80803529-80803548 | Msa0707500:intron | 40.0% |
| GAAAACACCGGGACAAAATA+TGG | - | chr4_4:80803539-80803558 | None:intergenic | 40.0% | |
| ! | CCGGTGTTTTCTTGCTTAAT+TGG | + | chr4_4:80803548-80803567 | Msa0707500:intron | 40.0% |
| AGGAGGCTATATAAAACAGC+TGG | - | chr4_4:80803575-80803594 | None:intergenic | 40.0% | |
| GATGTAGTATGACAGTAGTC+AGG | - | chr4_4:80803595-80803614 | None:intergenic | 40.0% | |
| AGTTTAAACCACGGTACATG+AGG | - | chr4_4:80803738-80803757 | None:intergenic | 40.0% | |
| GTAAGCAAGCATGGTTCATA+TGG | + | chr4_4:80804015-80804034 | Msa0707500:intron | 40.0% | |
| CGTGACAAATGTTAAGCATC+AGG | - | chr4_4:80804088-80804107 | None:intergenic | 40.0% | |
| ! | TAGCAAGTCTTGAGGGTTTT+TGG | - | chr4_4:80804190-80804209 | None:intergenic | 40.0% |
| !! | AAACCCTCAAGACTTGCTAT+TGG | + | chr4_4:80804191-80804210 | Msa0707500:CDS | 40.0% |
| !! | AGCTAAAAGAGGATTAGCCA+AGG | - | chr4_4:80804247-80804266 | None:intergenic | 40.0% |
| !! | GCTGATTCTGAAGCTAAAAG+AGG | - | chr4_4:80804258-80804277 | None:intergenic | 40.0% |
| GAGCCAAAATCAGTATACAC+AGG | + | chr4_4:80804561-80804580 | Msa0707500:CDS | 40.0% | |
| !!! | CCACCTGTGTATACTGATTT+TGG | - | chr4_4:80804567-80804586 | None:intergenic | 40.0% |
| CCAAAATCAGTATACACAGG+TGG | + | chr4_4:80804564-80804583 | Msa0707500:CDS | 40.0% | |
| TCGTTGTCAAAGTGAAACAG+GGG | + | chr4_4:80804593-80804612 | Msa0707500:CDS | 40.0% | |
| GTTCAAATGCCAGAGCAAAA+TGG | - | chr4_4:80804728-80804747 | None:intergenic | 40.0% | |
| GCATAACTTGAAGGATGCTA+TGG | + | chr4_4:80804761-80804780 | Msa0707500:CDS | 40.0% | |
| !!! | TATGGTTTTGACCGTTCTTC+AGG | + | chr4_4:80804779-80804798 | Msa0707500:CDS | 40.0% |
| GACTTGGATACCAAAAATGC+CGG | - | chr4_4:80805378-80805397 | None:intergenic | 40.0% | |
| AGGGTTATGGTCTGCTTTAA+GGG | - | chr4_4:80805509-80805528 | None:intergenic | 40.0% | |
| ACACATTGAAGTCAGGGTTA+TGG | - | chr4_4:80805522-80805541 | None:intergenic | 40.0% | |
| TCCTAGACACATTGAAGTCA+GGG | - | chr4_4:80805528-80805547 | None:intergenic | 40.0% | |
| TGATGCCTTAGTGTGTATGT+TGG | + | chr4_4:80805621-80805640 | Msa0707500:intron | 40.0% | |
| CAAAGCCAACATACACACTA+AGG | - | chr4_4:80805629-80805648 | None:intergenic | 40.0% | |
| !! | CTTAGTGTGTATGTTGGCTT+TGG | + | chr4_4:80805627-80805646 | Msa0707500:intron | 40.0% |
| !! | TGTTGGCTTTGGTAGGTTTA+TGG | + | chr4_4:80805638-80805657 | Msa0707500:intron | 40.0% |
| TGTCTTCAGCTTATTATCCG+TGG | + | chr4_4:80805683-80805702 | Msa0707500:intron | 40.0% | |
| CCTCAAGTTTCATATGAGAG+CGG | - | chr4_4:80805825-80805844 | None:intergenic | 40.0% | |
| CGCTCTCATATGAAACTTGA+GGG | + | chr4_4:80805823-80805842 | Msa0707500:intron | 40.0% | |
| GTAAATAGGGACATCTGTTC+TGG | + | chr4_4:80805895-80805914 | Msa0707500:intron | 40.0% | |
| !! | TAATGCTGCTTTCTTTGCCT+TGG | + | chr4_4:80806123-80806142 | Msa0707500:intron | 40.0% |
| GTGTACAATACACCAAATGG+TGG | - | chr4_4:80806267-80806286 | None:intergenic | 40.0% | |
| GCTGTGTACAATACACCAAA+TGG | - | chr4_4:80806270-80806289 | None:intergenic | 40.0% | |
| GTCATGTTAACAAGTGCTCT+AGG | - | chr4_4:80806457-80806476 | None:intergenic | 40.0% | |
| TTTCAGTCAGTAGTGCTCTT+GGG | - | chr4_4:80806560-80806579 | None:intergenic | 40.0% | |
| ! | TTTTCAGTCAGTAGTGCTCT+TGG | - | chr4_4:80806561-80806580 | None:intergenic | 40.0% |
| ! | GAGTCTTATCTATCCGATGT+GGG | - | chr4_4:80806897-80806916 | None:intergenic | 40.0% |
| ! | AGAGTCTTATCTATCCGATG+TGG | - | chr4_4:80806898-80806917 | None:intergenic | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr4_4:80806961-80806980 | Msa0707500:intron | 40.0% |
| TTAGGCCCCAAATTTCAACA+TGG | + | chr4_4:80806979-80806998 | Msa0707500:intron | 40.0% | |
| ! | GAGTCTTATCTATCCGATGT+GGG | - | chr4_4:80806897-80806916 | None:intergenic | 40.0% |
| ! | AGAGTCTTATCTATCCGATG+TGG | - | chr4_4:80806898-80806917 | None:intergenic | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr4_4:80806961-80806980 | Msa0707500:intron | 40.0% |
| TTAGTAGGTAAAACGTGGGA+AGG | + | chr4_4:80807356-80807375 | Msa0707500:intron | 40.0% | |
| CCAATTGAGATAAACTCACG+GGG | - | chr4_4:80807386-80807405 | None:intergenic | 40.0% | |
| GCATTGTAATATGCATGTGC+CGG | + | chr4_4:80807416-80807435 | Msa0707500:intron | 40.0% | |
| CATTGTAATATGCATGTGCC+GGG | + | chr4_4:80807417-80807436 | Msa0707500:intron | 40.0% | |
| ATTGTAATATGCATGTGCCG+GGG | + | chr4_4:80807418-80807437 | Msa0707500:intron | 40.0% | |
| GTGAATAAATGGAGTGTACG+GGG | - | chr4_4:80807450-80807469 | None:intergenic | 40.0% | |
| GGTGAATAAATGGAGTGTAC+GGG | - | chr4_4:80807451-80807470 | None:intergenic | 40.0% | |
| AAAGTCTCCGTTGGAATTTG+AGG | + | chr4_4:80807532-80807551 | Msa0707500:intron | 40.0% | |
| AAGTCTCCGTTGGAATTTGA+GGG | + | chr4_4:80807533-80807552 | Msa0707500:intron | 40.0% | |
| AAAGGTCCCTCAAATTCCAA+CGG | - | chr4_4:80807542-80807561 | None:intergenic | 40.0% | |
| CAAGAAAAAACTTCGGTGAC+AGG | - | chr4_4:80807653-80807672 | None:intergenic | 40.0% | |
| AATAGATCGCAGACATCAGA+TGG | - | chr4_4:80807899-80807918 | None:intergenic | 40.0% | |
| GCCAAAAGACTTAATGTGAC+TGG | - | chr4_4:80808146-80808165 | None:intergenic | 40.0% | |
| AGTGGACGAAGTAACTTTGA+AGG | + | chr4_4:80808643-80808662 | Msa0707500:CDS | 40.0% | |
| ACAATGGCATCATATGGAGA+TGG | + | chr4_4:80808707-80808726 | Msa0707500:CDS | 40.0% | |
| TTCACGCCTTAGAGCTTTCA+GGG | + | chr4_4:80802004-80802023 | Msa0707500:CDS | 45.0% | |
| TTTAGGCTCGTTCGTGCAAT+AGG | + | chr4_4:80802312-80802331 | Msa0707500:intron | 45.0% | |
| TTAGGCTCGTTCGTGCAATA+GGG | + | chr4_4:80802313-80802332 | Msa0707500:intron | 45.0% | |
| TAAACCACCTAAAGCAGACG+AGG | - | chr4_4:80802390-80802409 | None:intergenic | 45.0% | |
| GGTTTATTTGGATGGCTCAC+CGG | + | chr4_4:80802404-80802423 | Msa0707500:CDS | 45.0% | |
| GACAGAAGAAGTGGATGATC+CGG | - | chr4_4:80802426-80802445 | None:intergenic | 45.0% | |
| GAAGTGGGAAATCTAGAGGT+GGG | - | chr4_4:80802448-80802467 | None:intergenic | 45.0% | |
| GAAGTGTAACACCAGGAAGT+GGG | - | chr4_4:80802463-80802482 | None:intergenic | 45.0% | |
| TACATGATCAGGCAATGGAG+CGG | - | chr4_4:80802486-80802505 | None:intergenic | 45.0% | |
| GAGGCGACTTTAACTCCATT+TGG | - | chr4_4:80802539-80802558 | None:intergenic | 45.0% | |
| TCATACCGGTGATGTTTCAG+AGG | - | chr4_4:80802558-80802577 | None:intergenic | 45.0% | |
| TACACATTTGCTCGAACGGA+TGG | + | chr4_4:80802791-80802810 | Msa0707500:CDS | 45.0% | |
| ! | CCTGTTTACAGTGGTCTTGA+AGG | - | chr4_4:80802817-80802836 | None:intergenic | 45.0% |
| CCTTCAAGACCACTGTAAAC+AGG | + | chr4_4:80802814-80802833 | Msa0707500:CDS | 45.0% | |
| !! | GGAGTCATTTTCGTGTGGTT+CGG | + | chr4_4:80802835-80802854 | Msa0707500:CDS | 45.0% |
| !! | GAGTCATTTTCGTGTGGTTC+GGG | + | chr4_4:80802836-80802855 | Msa0707500:CDS | 45.0% |
| ! | CATTTGCTCTCTAGAAGCTG+AGG | - | chr4_4:80802892-80802911 | None:intergenic | 45.0% |
| ! | CTCAGCTTCTAGAGAGCAAA+TGG | + | chr4_4:80802890-80802909 | Msa0707500:CDS | 45.0% |
| GACCTATGTTCCTGAAATGG+TGG | + | chr4_4:80802935-80802954 | Msa0707500:CDS | 45.0% | |
| CTCCACCATTTCAGGAACAT+AGG | - | chr4_4:80802940-80802959 | None:intergenic | 45.0% | |
| ACAAGCAACTCCACCATTTC+AGG | - | chr4_4:80802948-80802967 | None:intergenic | 45.0% | |
| GAACCCTGCGTTTCTTGATT+GGG | + | chr4_4:80802980-80802999 | Msa0707500:CDS | 45.0% | |
| !! | CAGAGTATTGCTGTTGGAAC+TGG | + | chr4_4:80803081-80803100 | Msa0707500:intron | 45.0% |
| AGGCCAAACCCATTGCTTTA+AGG | + | chr4_4:80803153-80803172 | Msa0707500:intron | 45.0% | |
| TCAACTTTCCAGTCCCCATT+AGG | - | chr4_4:80803400-80803419 | None:intergenic | 45.0% | |
| GTAGTATGACAGTAGTCAGG+AGG | - | chr4_4:80803592-80803611 | None:intergenic | 45.0% | |
| ! | TGGCTTGCCTTATTGAACCA+CGG | + | chr4_4:80803780-80803799 | Msa0707500:intron | 45.0% |
| AAACCAGTAGAACTAGCTCC+AGG | - | chr4_4:80803808-80803827 | None:intergenic | 45.0% | |
| CTGAAAGTGAAGGCTGAGAT+TGG | + | chr4_4:80804156-80804175 | Msa0707500:CDS | 45.0% | |
| CCTCCAATAGCAAGTCTTGA+GGG | - | chr4_4:80804197-80804216 | None:intergenic | 45.0% | |
| TTGGAGGCAATTCATTCTGC+TGG | + | chr4_4:80804210-80804229 | Msa0707500:CDS | 45.0% | |
| GAAGCTGCAAGTACTATTCG+AGG | - | chr4_4:80804465-80804484 | None:intergenic | 45.0% | |
| CGAATAGTACTTGCAGCTTC+TGG | + | chr4_4:80804465-80804484 | Msa0707500:CDS | 45.0% | |
| CTGGGTAAATCGGACAAAAG+AGG | - | chr4_4:80804525-80804544 | None:intergenic | 45.0% | |
| ACGTGGAACACTGGGTAAAT+CGG | - | chr4_4:80804535-80804554 | None:intergenic | 45.0% | |
| ATGGGTCCTCTGGCAATTAA+AGG | - | chr4_4:80804709-80804728 | None:intergenic | 45.0% | |
| ATTCAGATGCTATTGGGAGG+CGG | + | chr4_4:80804950-80804969 | Msa0707500:intron | 45.0% | |
| CTGGTAAAGGGATGTATTCG+CGG | + | chr4_4:80804996-80805015 | Msa0707500:CDS | 45.0% | |
| GCCGATATCGAATGAACTTG+TGG | - | chr4_4:80805332-80805351 | None:intergenic | 45.0% | |
| AGGGACTTACTGTTGTGACT+TGG | - | chr4_4:80805394-80805413 | None:intergenic | 45.0% | |
| CAGGGTTATGGTCTGCTTTA+AGG | - | chr4_4:80805510-80805529 | None:intergenic | 45.0% | |
| ACCCTGACTTCAATGTGTCT+AGG | + | chr4_4:80805524-80805543 | Msa0707500:intron | 45.0% | |
| CTCCTAGACACATTGAAGTC+AGG | - | chr4_4:80805529-80805548 | None:intergenic | 45.0% | |
| !! | GTGTGTATGTTGGCTTTGGT+AGG | + | chr4_4:80805631-80805650 | Msa0707500:intron | 45.0% |
| CCGCTCTCATATGAAACTTG+AGG | + | chr4_4:80805822-80805841 | Msa0707500:intron | 45.0% | |
| GAAAAACCCAAGTCCCACAT+CGG | + | chr4_4:80806881-80806900 | Msa0707500:intron | 45.0% | |
| ATCTATCCGATGTGGGACTT+GGG | - | chr4_4:80806890-80806909 | None:intergenic | 45.0% | |
| TATCTATCCGATGTGGGACT+TGG | - | chr4_4:80806891-80806910 | None:intergenic | 45.0% | |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr4_4:80806954-80806973 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr4_4:80806951-80806970 | Msa0707500:intron | 45.0% |
| ! | CTTGGTGCGTGAATAGGTTT+AGG | - | chr4_4:80807016-80807035 | None:intergenic | 45.0% |
| GAAAAACCCAAGTCCCACAT+CGG | + | chr4_4:80806881-80806900 | Msa0707500:intron | 45.0% | |
| ATCTATCCGATGTGGGACTT+GGG | - | chr4_4:80806890-80806909 | None:intergenic | 45.0% | |
| TATCTATCCGATGTGGGACT+TGG | - | chr4_4:80806891-80806910 | None:intergenic | 45.0% | |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr4_4:80806954-80806973 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr4_4:80806951-80806970 | Msa0707500:intron | 45.0% |
| AGGCCCCAAATTTCAACAGA+AGG | + | chr4_4:80807166-80807185 | Msa0707500:intron | 45.0% | |
| GGCCCCAAATTTCAACAGAA+GGG | + | chr4_4:80807167-80807186 | Msa0707500:intron | 45.0% | |
| CCCCGTGAGTTTATCTCAAT+TGG | + | chr4_4:80807383-80807402 | Msa0707500:intron | 45.0% | |
| ! | ATTCTCACAGTTGCCACTTC+TGG | + | chr4_4:80808050-80808069 | Msa0707500:CDS | 45.0% |
| CAATGTACCTTGTCCAGAAG+TGG | - | chr4_4:80808066-80808085 | None:intergenic | 45.0% | |
| GCTTTCGTTTGCAGTTGATC+AGG | + | chr4_4:80808164-80808183 | Msa0707500:intron | 45.0% | |
| !! | GGCAGATTTCGTAGCTTGTT+TGG | - | chr4_4:80808205-80808224 | None:intergenic | 45.0% |
| TTCCACAGGTTTCCTGAGTA+AGG | - | chr4_4:80808609-80808628 | None:intergenic | 45.0% | |
| CATTTCGTCACCTCTCACAA+TGG | + | chr4_4:80808691-80808710 | Msa0707500:CDS | 45.0% | |
| CCATATGATGCCATTGTGAG+AGG | - | chr4_4:80808704-80808723 | None:intergenic | 45.0% | |
| CCTCTCACAATGGCATCATA+TGG | + | chr4_4:80808701-80808720 | Msa0707500:CDS | 45.0% | |
| !! | AAAAAAAATAGAAAATATTT+GGG | - | chr4_4:80802069-80802088 | None:intergenic | 5.0% |
| !! | AAAAAAAAATAGAAAATATT+TGG | - | chr4_4:80802070-80802089 | None:intergenic | 5.0% |
| !!! | AATAAATATAAACATATTTT+AGG | - | chr4_4:80804887-80804906 | None:intergenic | 5.0% |
| CTTCACGCCTTAGAGCTTTC+AGG | + | chr4_4:80802003-80802022 | Msa0707500:CDS | 50.0% | |
| !! | CTTGCAAATCTGGTAGTGGC+AGG | - | chr4_4:80802341-80802360 | None:intergenic | 50.0% |
| AGCAGACGAGGATTGTTTCG+AGG | - | chr4_4:80802378-80802397 | None:intergenic | 50.0% | |
| ! | CAATCCTCGTCTGCTTTAGG+TGG | + | chr4_4:80802383-80802402 | Msa0707500:CDS | 50.0% |
| TAGAGGTGGGACAGAAGAAG+TGG | - | chr4_4:80802435-80802454 | None:intergenic | 50.0% | |
| GGAAGTGGGAAATCTAGAGG+TGG | - | chr4_4:80802449-80802468 | None:intergenic | 50.0% | |
| CCAGGAAGTGGGAAATCTAG+AGG | - | chr4_4:80802452-80802471 | None:intergenic | 50.0% | |
| CCTCTAGATTTCCCACTTCC+TGG | + | chr4_4:80802449-80802468 | Msa0707500:CDS | 50.0% | |
| ! | GGAAGTGTAACACCAGGAAG+TGG | - | chr4_4:80802464-80802483 | None:intergenic | 50.0% |
| ACATGATCAGGCAATGGAGC+GGG | - | chr4_4:80802485-80802504 | None:intergenic | 50.0% | |
| !! | AGTCGCCTCTGAAACATCAC+CGG | + | chr4_4:80802550-80802569 | Msa0707500:CDS | 50.0% |
| GACAAATGCGACAGTGATCG+TGG | - | chr4_4:80802617-80802636 | None:intergenic | 50.0% | |
| ! | CAGTCTCCTGCTGCTTCAAT+AGG | + | chr4_4:80802717-80802736 | Msa0707500:intron | 50.0% |
| GGGCTACACATTTGCTCGAA+CGG | + | chr4_4:80802787-80802806 | Msa0707500:CDS | 50.0% | |
| !! | TCATTTTCGTGTGGTTCGGG+AGG | + | chr4_4:80802839-80802858 | Msa0707500:CDS | 50.0% |
| GGAACCCTGCGTTTCTTGAT+TGG | + | chr4_4:80802979-80802998 | Msa0707500:CDS | 50.0% | |
| CCTCCCAATCAAGAAACGCA+GGG | - | chr4_4:80802986-80803005 | None:intergenic | 50.0% | |
| ACCTCCCAATCAAGAAACGC+AGG | - | chr4_4:80802987-80803006 | None:intergenic | 50.0% | |
| TGATTGGGAGGTCAATGAGC+AGG | + | chr4_4:80802995-80803014 | Msa0707500:CDS | 50.0% | |
| ! | GGGTTTGGCCTACTGTCTTT+TGG | - | chr4_4:80803144-80803163 | None:intergenic | 50.0% |
| ! | TACATGAGGCGCCCATCTAT+GGG | - | chr4_4:80803724-80803743 | None:intergenic | 50.0% |
| ! | CCAGGTACCGTGGTTCAATA+AGG | - | chr4_4:80803790-80803809 | None:intergenic | 50.0% |
| CCTTATTGAACCACGGTACC+TGG | + | chr4_4:80803787-80803806 | Msa0707500:intron | 50.0% | |
| !! | GTACCTGGAGCTAGTTCTAC+TGG | + | chr4_4:80803802-80803821 | Msa0707500:intron | 50.0% |
| GCAAGCATGGTTCATATGGG+TGG | + | chr4_4:80804019-80804038 | Msa0707500:intron | 50.0% | |
| !! | CCCTCAAGACTTGCTATTGG+AGG | + | chr4_4:80804194-80804213 | Msa0707500:CDS | 50.0% |
| GCCTCCAATAGCAAGTCTTG+AGG | - | chr4_4:80804198-80804217 | None:intergenic | 50.0% | |
| !!! | TGCTGGTTTTTCTGGTGCCT+TGG | + | chr4_4:80804227-80804246 | Msa0707500:CDS | 50.0% |
| ! | AGCTTCTGGTGTTGAGCATG+AGG | + | chr4_4:80804479-80804498 | Msa0707500:CDS | 50.0% |
| GGACAAAAGAGGTTCGGCAA+TGG | - | chr4_4:80804514-80804533 | None:intergenic | 50.0% | |
| TCTTCAGGACGTGGAACACT+GGG | - | chr4_4:80804543-80804562 | None:intergenic | 50.0% | |
| !!! | GATTTTGGCTCTTCAGGACG+TGG | - | chr4_4:80804552-80804571 | None:intergenic | 50.0% |
| GCTCTGGCATTTGAACTTCC+TGG | + | chr4_4:80804732-80804751 | Msa0707500:CDS | 50.0% | |
| CTGGCATTTGAACTTCCTGG+CGG | + | chr4_4:80804735-80804754 | Msa0707500:CDS | 50.0% | |
| GTGGATCATTCTCAGCTGGT+GGG | + | chr4_4:80804972-80804991 | Msa0707500:CDS | 50.0% | |
| CGCGAATACATCCCTTTACC+AGG | - | chr4_4:80804998-80805017 | None:intergenic | 50.0% | |
| GCGGATAACCTGAACAGCTT+GGG | - | chr4_4:80805806-80805825 | None:intergenic | 50.0% | |
| AGCGGATAACCTGAACAGCT+TGG | - | chr4_4:80805807-80805826 | None:intergenic | 50.0% | |
| ! | GCTGCTTTCTTTGCCTTGGT+TGG | + | chr4_4:80806127-80806146 | Msa0707500:intron | 50.0% |
| ACTAGAGCTCCTGCATATGC+AGG | + | chr4_4:80806226-80806245 | Msa0707500:intron | 50.0% | |
| CTAGAGCTCCTGCATATGCA+GGG | + | chr4_4:80806227-80806246 | Msa0707500:intron | 50.0% | |
| GCAATCCTCACCTTACAAGC+CGG | + | chr4_4:80806941-80806960 | Msa0707500:intron | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr4_4:80806949-80806968 | None:intergenic | 50.0% |
| !! | TTTGGGCTTGGTGCGTGAAT+AGG | - | chr4_4:80807022-80807041 | None:intergenic | 50.0% |
| GCAATCCTCACCTTACAAGC+CGG | + | chr4_4:80806941-80806960 | Msa0707500:intron | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr4_4:80806949-80806968 | None:intergenic | 50.0% |
| GTAGGTAAAACGTGGGAAGG+TGG | + | chr4_4:80807359-80807378 | Msa0707500:intron | 50.0% | |
| GGAAGGTAGAAAGTCTCCGT+TGG | + | chr4_4:80807523-80807542 | Msa0707500:intron | 50.0% | |
| ! | ACAGTTGCCACTTCTGGACA+AGG | + | chr4_4:80808056-80808075 | Msa0707500:CDS | 50.0% |
| GTCCTTACTCAGGAAACCTG+TGG | + | chr4_4:80808604-80808623 | Msa0707500:intron | 50.0% | |
| !! | CTGCTCACTGATTCGTAGCT+TGG | - | chr4_4:80808825-80808844 | None:intergenic | 50.0% |
| GGCGCTACATGATCAGGCAA+TGG | - | chr4_4:80802491-80802510 | None:intergenic | 55.0% | |
| TTGCCTGATCATGTAGCGCC+TGG | + | chr4_4:80802491-80802510 | Msa0707500:CDS | 55.0% | |
| TGCCTGATCATGTAGCGCCT+GGG | + | chr4_4:80802492-80802511 | Msa0707500:CDS | 55.0% | |
| TTCCCAGGCGCTACATGATC+AGG | - | chr4_4:80802497-80802516 | None:intergenic | 55.0% | |
| !! | TTTTCGTGTGGTTCGGGAGG+TGG | + | chr4_4:80802842-80802861 | Msa0707500:CDS | 55.0% |
| ! | GGCAATTGGTGGCAATGTGC+AGG | + | chr4_4:80802866-80802885 | Msa0707500:CDS | 55.0% |
| CCCTGCGTTTCTTGATTGGG+AGG | + | chr4_4:80802983-80803002 | Msa0707500:CDS | 55.0% | |
| ! | ACATGAGGCGCCCATCTATG+GGG | - | chr4_4:80803723-80803742 | None:intergenic | 55.0% |
| ! | GTACATGAGGCGCCCATCTA+TGG | - | chr4_4:80803725-80803744 | None:intergenic | 55.0% |
| ! | AGAACTAGCTCCAGGTACCG+TGG | - | chr4_4:80803800-80803819 | None:intergenic | 55.0% |
| CTCTTCAGGACGTGGAACAC+TGG | - | chr4_4:80804544-80804563 | None:intergenic | 55.0% | |
| CCAGAGCAAAATGGGTCCTC+TGG | - | chr4_4:80804719-80804738 | None:intergenic | 55.0% | |
| ! | CCAGAGGACCCATTTTGCTC+TGG | + | chr4_4:80804716-80804735 | Msa0707500:intron | 55.0% |
| CATTTGAACTTCCTGGCGGC+TGG | + | chr4_4:80804739-80804758 | Msa0707500:CDS | 55.0% | |
| ! | TTCAAGTTATGCCAGCCGCC+AGG | - | chr4_4:80804753-80804772 | None:intergenic | 55.0% |
| TGGCGGCTGGCATAACTTGA+AGG | + | chr4_4:80804752-80804771 | Msa0707500:CDS | 55.0% | |
| GGTGGATCATTCTCAGCTGG+TGG | + | chr4_4:80804971-80804990 | Msa0707500:CDS | 55.0% | |
| ! | ATGCAGGAGCTCTAGTGCAC+CGG | - | chr4_4:80806222-80806241 | None:intergenic | 55.0% |
| !! | ACCAAGCCCAAAGAGTGCTG+AGG | + | chr4_4:80807030-80807049 | Msa0707500:intron | 55.0% |
| !! | CCAAGCCCAAAGAGTGCTGA+GGG | + | chr4_4:80807031-80807050 | Msa0707500:intron | 55.0% |
| !! | CAAGCCCAAAGAGTGCTGAG+GGG | + | chr4_4:80807032-80807051 | Msa0707500:intron | 55.0% |
| !! | AAGCCCAAAGAGTGCTGAGG+GGG | + | chr4_4:80807033-80807052 | Msa0707500:intron | 55.0% |
| AGTGTACGGGGTTCAAACCC+CGG | - | chr4_4:80807438-80807457 | None:intergenic | 55.0% | |
| ! | GGAGCGGGAAGTGTAACACC+AGG | - | chr4_4:80802470-80802489 | None:intergenic | 60.0% |
| GTTCGGGAGGTGGAGGCAAT+TGG | + | chr4_4:80802852-80802871 | Msa0707500:CDS | 60.0% | |
| CAGATGCTATTGGGAGGCGG+TGG | + | chr4_4:80804953-80804972 | Msa0707500:intron | 60.0% | |
| GGCGGTGGATCATTCTCAGC+TGG | + | chr4_4:80804968-80804987 | Msa0707500:CDS | 60.0% | |
| ! | TCATTCTCAGCTGGTGGGCC+TGG | + | chr4_4:80804977-80804996 | Msa0707500:CDS | 60.0% |
| ! | TCAGCTGGTGGGCCTGGTAA+AGG | + | chr4_4:80804983-80805002 | Msa0707500:CDS | 60.0% |
| ! | CAGCTGGTGGGCCTGGTAAA+GGG | + | chr4_4:80804984-80805003 | Msa0707500:CDS | 60.0% |
| GAGCTGGACCCAAGCTGTTC+AGG | + | chr4_4:80805795-80805814 | Msa0707500:intron | 60.0% | |
| ! | TGCAGGAGCTCTAGTGCACC+GGG | - | chr4_4:80806221-80806240 | None:intergenic | 60.0% |
| GCTCCTGCATATGCAGGGTC+CGG | + | chr4_4:80806232-80806251 | Msa0707500:intron | 60.0% | |
| CTCCTGCATATGCAGGGTCC+GGG | + | chr4_4:80806233-80806252 | Msa0707500:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+AGG | - | chr4_4:80806238-80806257 | None:intergenic | 60.0% | |
| TGCATATGCAGGGTCCGGGA+AGG | + | chr4_4:80806237-80806256 | Msa0707500:intron | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | + | chr4_4:80806238-80806257 | Msa0707500:intron | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | + | chr4_4:80806239-80806258 | Msa0707500:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr4_4:80806254-80806273 | None:intergenic | 60.0% |
| CCCTCAGCACTCTTTGGGCT+TGG | - | chr4_4:80807034-80807053 | None:intergenic | 60.0% | |
| !! | AGCCCAAAGAGTGCTGAGGG+GGG | + | chr4_4:80807034-80807053 | Msa0707500:intron | 60.0% |
| ACCCCCCCTCAGCACTCTTT+GGG | - | chr4_4:80807039-80807058 | None:intergenic | 60.0% | |
| ! | AGTGCTGAGGGGGGGTGTAT+TGG | + | chr4_4:80807043-80807062 | Msa0707500:intron | 60.0% |
| ! | GTGCTGAGGGGGGGTGTATT+GGG | + | chr4_4:80807044-80807063 | Msa0707500:intron | 60.0% |
| ! | TCGTGTGGTTCGGGAGGTGG+AGG | + | chr4_4:80802845-80802864 | Msa0707500:CDS | 65.0% |
| CGGGAGGTGGAGGCAATTGG+TGG | + | chr4_4:80802855-80802874 | Msa0707500:CDS | 65.0% | |
| GATGGGCGCCTCATGTACCG+TGG | + | chr4_4:80803727-80803746 | Msa0707500:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr4_4:80806252-80806271 | Msa0707500:intron | 65.0% | |
| !! | GCCCAAAGAGTGCTGAGGGG+GGG | + | chr4_4:80807035-80807054 | Msa0707500:intron | 65.0% |
| CACCCCCCCTCAGCACTCTT+TGG | - | chr4_4:80807040-80807059 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 80801862 | 80809166 | 80801862 | ID=Msa0707500;Name=Msa0707500 |
| chr4_4 | mRNA | 80801862 | 80809166 | 80801862 | ID=Msa0707500-mRNA-1;Parent=Msa0707500;Name=Msa0707500-mRNA-1;_AED=0.09;_eAED=0.09;_QI=125|1|1|1|1|1|13|303|510 |
| chr4_4 | exon | 80801862 | 80802025 | 80801862 | ID=Msa0707500-mRNA-1:exon:26365;Parent=Msa0707500-mRNA-1 |
| chr4_4 | exon | 80802317 | 80802571 | 80802317 | ID=Msa0707500-mRNA-1:exon:26366;Parent=Msa0707500-mRNA-1 |
| chr4_4 | exon | 80802720 | 80803016 | 80802720 | ID=Msa0707500-mRNA-1:exon:26367;Parent=Msa0707500-mRNA-1 |
| chr4_4 | exon | 80804153 | 80804320 | 80804153 | ID=Msa0707500-mRNA-1:exon:26368;Parent=Msa0707500-mRNA-1 |
| chr4_4 | exon | 80804447 | 80804614 | 80804447 | ID=Msa0707500-mRNA-1:exon:26369;Parent=Msa0707500-mRNA-1 |
| chr4_4 | exon | 80804720 | 80804800 | 80804720 | ID=Msa0707500-mRNA-1:exon:26370;Parent=Msa0707500-mRNA-1 |
| chr4_4 | exon | 80804956 | 80805022 | 80804956 | ID=Msa0707500-mRNA-1:exon:26371;Parent=Msa0707500-mRNA-1 |
| chr4_4 | exon | 80805306 | 80805403 | 80805306 | ID=Msa0707500-mRNA-1:exon:26372;Parent=Msa0707500-mRNA-1 |
| chr4_4 | exon | 80808005 | 80808077 | 80808005 | ID=Msa0707500-mRNA-1:exon:26373;Parent=Msa0707500-mRNA-1 |
| chr4_4 | exon | 80808178 | 80808248 | 80808178 | ID=Msa0707500-mRNA-1:exon:26374;Parent=Msa0707500-mRNA-1 |
| chr4_4 | exon | 80808445 | 80808494 | 80808445 | ID=Msa0707500-mRNA-1:exon:26375;Parent=Msa0707500-mRNA-1 |
| chr4_4 | exon | 80808616 | 80808728 | 80808616 | ID=Msa0707500-mRNA-1:exon:26376;Parent=Msa0707500-mRNA-1 |
| chr4_4 | exon | 80808811 | 80809166 | 80808811 | ID=Msa0707500-mRNA-1:exon:26377;Parent=Msa0707500-mRNA-1 |
| chr4_4 | five_prime_UTR | 80801862 | 80801986 | 80801862 | ID=Msa0707500-mRNA-1:five_prime_utr;Parent=Msa0707500-mRNA-1 |
| chr4_4 | CDS | 80801987 | 80802025 | 80801987 | ID=Msa0707500-mRNA-1:cds;Parent=Msa0707500-mRNA-1 |
| chr4_4 | CDS | 80802317 | 80802571 | 80802317 | ID=Msa0707500-mRNA-1:cds;Parent=Msa0707500-mRNA-1 |
| chr4_4 | CDS | 80802720 | 80803016 | 80802720 | ID=Msa0707500-mRNA-1:cds;Parent=Msa0707500-mRNA-1 |
| chr4_4 | CDS | 80804153 | 80804320 | 80804153 | ID=Msa0707500-mRNA-1:cds;Parent=Msa0707500-mRNA-1 |
| chr4_4 | CDS | 80804447 | 80804614 | 80804447 | ID=Msa0707500-mRNA-1:cds;Parent=Msa0707500-mRNA-1 |
| chr4_4 | CDS | 80804720 | 80804800 | 80804720 | ID=Msa0707500-mRNA-1:cds;Parent=Msa0707500-mRNA-1 |
| chr4_4 | CDS | 80804956 | 80805022 | 80804956 | ID=Msa0707500-mRNA-1:cds;Parent=Msa0707500-mRNA-1 |
| chr4_4 | CDS | 80805306 | 80805403 | 80805306 | ID=Msa0707500-mRNA-1:cds;Parent=Msa0707500-mRNA-1 |
| chr4_4 | CDS | 80808005 | 80808077 | 80808005 | ID=Msa0707500-mRNA-1:cds;Parent=Msa0707500-mRNA-1 |
| chr4_4 | CDS | 80808178 | 80808248 | 80808178 | ID=Msa0707500-mRNA-1:cds;Parent=Msa0707500-mRNA-1 |
| chr4_4 | CDS | 80808445 | 80808494 | 80808445 | ID=Msa0707500-mRNA-1:cds;Parent=Msa0707500-mRNA-1 |
| chr4_4 | CDS | 80808616 | 80808728 | 80808616 | ID=Msa0707500-mRNA-1:cds;Parent=Msa0707500-mRNA-1 |
| chr4_4 | CDS | 80808811 | 80808863 | 80808811 | ID=Msa0707500-mRNA-1:cds;Parent=Msa0707500-mRNA-1 |
| chr4_4 | three_prime_UTR | 80808864 | 80809166 | 80808864 | ID=Msa0707500-mRNA-1:three_prime_utr;Parent=Msa0707500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
