Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450990 | sp|P29677|MPPA_SOLTU | 73.137 | 510 | 131 | 2 | 1 | 510 | 1 | 504 | 0.0 | 746 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450990 | G7L7C9 | 98.431 | 510 | 8 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1030 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0707500 | Msa1450990 | 0.905105 | 6.098446e-80 | -8.615850e-47 |
| Msa1289930 | Msa1450990 | 0.854108 | 1.532657e-61 | -8.615850e-47 |
| Msa1069730 | Msa1450990 | 0.806590 | 7.639466e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450990 | MtrunA17_Chr8g0389651 | 98.431 | 510 | 8 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1030 |
| Msa1450990 | MtrunA17_Chr8g0340831 | 71.176 | 510 | 144 | 1 | 1 | 510 | 1 | 507 | 0.0 | 724 |
| Msa1450990 | MtrunA17_Chr7g0234701 | 32.071 | 449 | 278 | 16 | 69 | 500 | 82 | 520 | 5.59e-61 | 209 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450990 | AT1G51980.1 | 65.551 | 508 | 170 | 4 | 1 | 508 | 1 | 503 | 0.0 | 645 |
| Msa1450990 | AT3G16480.1 | 68.874 | 453 | 139 | 2 | 56 | 508 | 49 | 499 | 0.0 | 620 |
| Msa1450990 | AT1G51980.2 | 65.275 | 455 | 153 | 4 | 1 | 455 | 1 | 450 | 0.0 | 568 |
| Msa1450990 | AT3G02090.1 | 31.377 | 443 | 279 | 14 | 80 | 510 | 96 | 525 | 6.83e-58 | 201 |
| Msa1450990 | AT3G02090.2 | 32.126 | 414 | 261 | 12 | 80 | 482 | 96 | 500 | 4.58e-56 | 196 |
Find 140 sgRNAs with CRISPR-Local
Find 495 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACCTGTGTATACTGATTT+TGG | 0.186959 | tig0033178:+15723 | None:intergenic |
| TCTGCTTTAGGTGGTTTATT+TGG | 0.229094 | tig0033178:-17894 | Msa1450990:CDS |
| CTTCACGCCTTAGAGCTTTC+AGG | 0.230620 | tig0033178:-18283 | Msa1450990:CDS |
| CCTCTAGATTTCCCACTTCC+TGG | 0.252710 | tig0033178:-17837 | Msa1450990:CDS |
| ATTCTCACAGTTGCCACTTC+TGG | 0.252866 | tig0033178:-12236 | Msa1450990:CDS |
| TATGAGACCCCATTAACTTT+TGG | 0.282250 | tig0033178:-17521 | Msa1450990:CDS |
| GCTCTGGCATTTGAACTTCC+TGG | 0.297177 | tig0033178:-15555 | Msa1450990:CDS |
| CACAATCATTAAATTTCATT+TGG | 0.300256 | tig0033178:-11271 | Msa1450990:three_prime_UTR |
| ACAAGCAACTCCACCATTTC+AGG | 0.304283 | tig0033178:+17341 | None:intergenic |
| TTTAGGCTCGTTCGTGCAAT+AGG | 0.306233 | tig0033178:-17974 | Msa1450990:intron |
| TCAGCAGTAAATAGACTAAA+TGG | 0.315220 | tig0033178:-16014 | Msa1450990:CDS |
| CGAATAGTACTTGCAGCTTC+TGG | 0.330623 | tig0033178:-15822 | Msa1450990:CDS |
| GGATTCCAAATTCATCAAAA+TGG | 0.331765 | tig0033178:+12063 | None:intergenic |
| AAACAATCCTCGTCTGCTTT+AGG | 0.338691 | tig0033178:-17906 | Msa1450990:CDS |
| TTACATAATTCAGATGCTAT+TGG | 0.340743 | tig0033178:-15344 | Msa1450990:intron |
| GTTCAAATGCCAGAGCAAAA+TGG | 0.340749 | tig0033178:+15562 | None:intergenic |
| TACATAATTCAGATGCTATT+GGG | 0.340761 | tig0033178:-15343 | Msa1450990:intron |
| AGAACTTGAACTTGCAAATC+TGG | 0.344149 | tig0033178:+17938 | None:intergenic |
| GAGGCGACTTTAACTCCATT+TGG | 0.349938 | tig0033178:+17750 | None:intergenic |
| TATCGTTGTCAAAGTGAAAC+AGG | 0.356292 | tig0033178:-15696 | Msa1450990:CDS |
| GAGTTAAATAAATATATATA+TGG | 0.365713 | tig0033178:-11163 | Msa1450990:three_prime_UTR |
| GGAACCCTGCGTTTCTTGAT+TGG | 0.370363 | tig0033178:-17307 | Msa1450990:CDS |
| CTCAGCTTCTAGAGAGCAAA+TGG | 0.370717 | tig0033178:-17396 | Msa1450990:CDS |
| CTTTAGGTGGTTTATTTGGA+TGG | 0.371121 | tig0033178:-17890 | Msa1450990:CDS |
| GTGTAGCCCCAAAAGTTAAT+GGG | 0.373375 | tig0033178:+17513 | None:intergenic |
| TACTAACCCTGAAAGCTCTA+AGG | 0.383892 | tig0033178:+18276 | None:intergenic |
| TGTGTAGCCCCAAAAGTTAA+TGG | 0.385100 | tig0033178:+17512 | None:intergenic |
| GGCAGATTTCGTAGCTTGTT+TGG | 0.386723 | tig0033178:+12084 | None:intergenic |
| CAGTCTCCTGCTGCTTCAAT+AGG | 0.390652 | tig0033178:-17569 | Msa1450990:CDS |
| CAGCTGGTGGGCCTGGTAAA+GGG | 0.394120 | tig0033178:-15303 | Msa1450990:CDS |
| GAACCCTGCGTTTCTTGATT+GGG | 0.398292 | tig0033178:-17306 | Msa1450990:CDS |
| TTCCCAGGCGCTACATGATC+AGG | 0.400517 | tig0033178:+17792 | None:intergenic |
| AGGCGACTTTAACTCCATTT+GGG | 0.408007 | tig0033178:+17751 | None:intergenic |
| GTTCGGGAGGTGGAGGCAAT+TGG | 0.414574 | tig0033178:-17434 | Msa1450990:CDS |
| TCAGCTGGTGGGCCTGGTAA+AGG | 0.414881 | tig0033178:-15304 | Msa1450990:CDS |
| CCTGTTTACAGTGGTCTTGA+AGG | 0.419039 | tig0033178:+17472 | None:intergenic |
| GAGCAATGCTGCATTATATT+CGG | 0.420496 | tig0033178:-11234 | Msa1450990:three_prime_UTR |
| AAACCCTCAAGACTTGCTAT+TGG | 0.423179 | tig0033178:-16096 | Msa1450990:CDS |
| TTCACGCCTTAGAGCTTTCA+GGG | 0.423821 | tig0033178:-18282 | Msa1450990:intron |
| TTCAAATGCCAGAGCAAAAT+GGG | 0.424354 | tig0033178:+15563 | None:intergenic |
| CTGCTCACTGATTCGTAGCT+TGG | 0.426370 | tig0033178:+11465 | None:intergenic |
| TTGGAGGCAATTCATTCTGC+TGG | 0.430435 | tig0033178:-16077 | Msa1450990:CDS |
| TCATTCTCAGCTGGTGGGCC+TGG | 0.430849 | tig0033178:-15310 | Msa1450990:CDS |
| AACAATATTTACAATAATAC+CGG | 0.433486 | tig0033178:-14931 | Msa1450990:CDS |
| CATTTGAACTTCCTGGCGGC+TGG | 0.435621 | tig0033178:-15548 | Msa1450990:CDS |
| GCTTTCGTTTGCAGTTGATC+AGG | 0.443499 | tig0033178:-12122 | Msa1450990:intron |
| ACGTGGAACACTGGGTAAAT+CGG | 0.446147 | tig0033178:+15755 | None:intergenic |
| CCTTCAAGACCACTGTAAAC+AGG | 0.448500 | tig0033178:-17472 | Msa1450990:CDS |
| TGGCGGCTGGCATAACTTGA+AGG | 0.449075 | tig0033178:-15535 | Msa1450990:CDS |
| TCCACAAGTTCATTCGATAT+CGG | 0.450885 | tig0033178:-14959 | Msa1450990:CDS |
| GAAGACCTATGTTCCTGAAA+TGG | 0.455623 | tig0033178:-17354 | Msa1450990:CDS |
| TTGCCTGATCATGTAGCGCC+TGG | 0.456505 | tig0033178:-17795 | Msa1450990:CDS |
| ATGGTTGTTTCAGAAGATAT+AGG | 0.461616 | tig0033178:-11841 | Msa1450990:CDS |
| CCTCCAATAGCAAGTCTTGA+GGG | 0.463091 | tig0033178:+16093 | None:intergenic |
| CCTCTCACAATGGCATCATA+TGG | 0.464688 | tig0033178:-11585 | Msa1450990:CDS |
| CTGAAAGTGAAGGCTGAGAT+TGG | 0.468579 | tig0033178:-16131 | Msa1450990:CDS |
| GACAGAAGAAGTGGATGATC+CGG | 0.481212 | tig0033178:+17863 | None:intergenic |
| GGGCTACACATTTGCTCGAA+CGG | 0.481223 | tig0033178:-17499 | Msa1450990:CDS |
| TCGTGTGGTTCGGGAGGTGG+AGG | 0.481573 | tig0033178:-17441 | Msa1450990:CDS |
| CTCATTAGCTGCAATATCAA+TGG | 0.483463 | tig0033178:+12259 | None:intergenic |
| ATTTGGGAGCGTAGTAATAA+CGG | 0.488694 | tig0033178:+17767 | None:intergenic |
| GGCAATTGGTGGCAATGTGC+AGG | 0.489712 | tig0033178:-17420 | Msa1450990:CDS |
| CTCTTCAGGACGTGGAACAC+TGG | 0.491349 | tig0033178:+15746 | None:intergenic |
| CGCGAATACATCCCTTTACC+AGG | 0.496570 | tig0033178:+15292 | None:intergenic |
| CCCTCAAGACTTGCTATTGG+AGG | 0.497371 | tig0033178:-16093 | Msa1450990:CDS |
| AAATATGACATGGTCGTACA+TGG | 0.503648 | tig0033178:+11201 | None:intergenic |
| TAAATTTATTGACAACAAGA+AGG | 0.504189 | tig0033178:+11341 | None:intergenic |
| GTTATTACTACGCTCCCAAA+TGG | 0.506094 | tig0033178:-17765 | Msa1450990:CDS |
| CCCTGCGTTTCTTGATTGGG+AGG | 0.507845 | tig0033178:-17303 | Msa1450990:CDS |
| TTAGGCTCGTTCGTGCAATA+GGG | 0.512338 | tig0033178:-17973 | Msa1450990:intron |
| GGTGGATCATTCTCAGCTGG+TGG | 0.512878 | tig0033178:-15316 | Msa1450990:CDS |
| GGAAGTGTAACACCAGGAAG+TGG | 0.514628 | tig0033178:+17825 | None:intergenic |
| CGGGAGGTGGAGGCAATTGG+TGG | 0.515419 | tig0033178:-17431 | Msa1450990:CDS |
| GGTTTATTTGGATGGCTCAC+CGG | 0.515600 | tig0033178:-17882 | Msa1450990:CDS |
| GGCGGTGGATCATTCTCAGC+TGG | 0.517181 | tig0033178:-15319 | Msa1450990:CDS |
| GCATAACTTGAAGGATGCTA+TGG | 0.518450 | tig0033178:-15526 | Msa1450990:CDS |
| GAAGCTGCAAGTACTATTCG+AGG | 0.520541 | tig0033178:+15825 | None:intergenic |
| TGAAGAAACGTTCCTGTACA+TGG | 0.522192 | tig0033178:+18301 | None:intergenic |
| GCTGATTCTGAAGCTAAAAG+AGG | 0.522365 | tig0033178:+16032 | None:intergenic |
| ACATGATCAGGCAATGGAGC+GGG | 0.525018 | tig0033178:+17804 | None:intergenic |
| TTCAAGTTATGCCAGCCGCC+AGG | 0.525656 | tig0033178:+15537 | None:intergenic |
| TAAATCGGACAAAAGAGGTT+CGG | 0.527264 | tig0033178:+15770 | None:intergenic |
| TGATTGGGAGGTCAATGAGC+AGG | 0.535046 | tig0033178:-17291 | Msa1450990:intron |
| GCCGATATCGAATGAACTTG+TGG | 0.536829 | tig0033178:+14958 | None:intergenic |
| TCGATTCATTCACCATGTAC+AGG | 0.537766 | tig0033178:-18313 | Msa1450990:exon |
| AGGGACTTACTGTTGTGACT+TGG | 0.538586 | tig0033178:+14896 | None:intergenic |
| TATAGACCTATTGAAGCAGC+AGG | 0.539149 | tig0033178:+17563 | None:intergenic |
| AGCAGACGAGGATTGTTTCG+AGG | 0.541779 | tig0033178:+17911 | None:intergenic |
| TACACATTTGCTCGAACGGA+TGG | 0.542154 | tig0033178:-17495 | Msa1450990:CDS |
| CTGGTAAAGGGATGTATTCG+CGG | 0.542817 | tig0033178:-15291 | Msa1450990:CDS |
| CAATGTACCTTGTCCAGAAG+TGG | 0.546813 | tig0033178:+12223 | None:intergenic |
| GTGGATCATTCTCAGCTGGT+GGG | 0.548891 | tig0033178:-15315 | Msa1450990:CDS |
| CAATCCTCGTCTGCTTTAGG+TGG | 0.549840 | tig0033178:-17903 | Msa1450990:CDS |
| AGTGGACGAAGTAACTTTGA+AGG | 0.562537 | tig0033178:-11643 | Msa1450990:CDS |
| CTTGCAAATCTGGTAGTGGC+AGG | 0.563200 | tig0033178:+17948 | None:intergenic |
| TCTTCAGGACGTGGAACACT+GGG | 0.569641 | tig0033178:+15747 | None:intergenic |
| TGAACTTGCAAATCTGGTAG+TGG | 0.570423 | tig0033178:+17944 | None:intergenic |
| TATGTAGCTTCTGAAAGTGA+AGG | 0.570547 | tig0033178:-16141 | Msa1450990:intron |
| GCCTCCAATAGCAAGTCTTG+AGG | 0.576645 | tig0033178:+16092 | None:intergenic |
| CATTTCGTCACCTCTCACAA+TGG | 0.577598 | tig0033178:-11595 | Msa1450990:CDS |
| CTCCACCATTTCAGGAACAT+AGG | 0.580519 | tig0033178:+17349 | None:intergenic |
| ACCTCCCAATCAAGAAACGC+AGG | 0.581477 | tig0033178:+17302 | None:intergenic |
| CTGGGTAAATCGGACAAAAG+AGG | 0.582618 | tig0033178:+15765 | None:intergenic |
| CAGATGCTATTGGGAGGCGG+TGG | 0.582698 | tig0033178:-15334 | Msa1450990:CDS |
| AGCTTCTGGTGTTGAGCATG+AGG | 0.584438 | tig0033178:-15808 | Msa1450990:CDS |
| TAGAGGTGGGACAGAAGAAG+TGG | 0.588518 | tig0033178:+17854 | None:intergenic |
| GGCGCTACATGATCAGGCAA+TGG | 0.589582 | tig0033178:+17798 | None:intergenic |
| TGCCTGATCATGTAGCGCCT+GGG | 0.591064 | tig0033178:-17794 | Msa1450990:CDS |
| GGACAAAAGAGGTTCGGCAA+TGG | 0.592591 | tig0033178:+15776 | None:intergenic |
| ACAATGGCATCATATGGAGA+TGG | 0.608918 | tig0033178:-11579 | Msa1450990:intron |
| TCATACCGGTGATGTTTCAG+AGG | 0.611414 | tig0033178:+17731 | None:intergenic |
| ACAGTTGCCACTTCTGGACA+AGG | 0.624060 | tig0033178:-12230 | Msa1450990:intron |
| GATAATCAAGACCTGAAGAA+CGG | 0.625024 | tig0033178:+15497 | None:intergenic |
| TCAGCTTCTAGAGAGCAAAT+GGG | 0.627001 | tig0033178:-17395 | Msa1450990:CDS |
| GGAAGTGGGAAATCTAGAGG+TGG | 0.628061 | tig0033178:+17840 | None:intergenic |
| CATTTGCTCTCTAGAAGCTG+AGG | 0.630139 | tig0033178:+17397 | None:intergenic |
| CCAGGAAGTGGGAAATCTAG+AGG | 0.630653 | tig0033178:+17837 | None:intergenic |
| ATTCAGATGCTATTGGGAGG+CGG | 0.630948 | tig0033178:-15337 | Msa1450990:intron |
| GACCTATGTTCCTGAAATGG+TGG | 0.631367 | tig0033178:-17351 | Msa1450990:CDS |
| AGTCGCCTCTGAAACATCAC+CGG | 0.632879 | tig0033178:-17736 | Msa1450990:intron |
| GAAGTGGGAAATCTAGAGGT+GGG | 0.637022 | tig0033178:+17841 | None:intergenic |
| AGTTGCTTGTTGATATTGTG+AGG | 0.637501 | tig0033178:-17328 | Msa1450990:CDS |
| ATCGTTGTCAAAGTGAAACA+GGG | 0.638854 | tig0033178:-15695 | Msa1450990:CDS |
| TACATGATCAGGCAATGGAG+CGG | 0.640929 | tig0033178:+17803 | None:intergenic |
| CCATATGATGCCATTGTGAG+AGG | 0.648207 | tig0033178:+11585 | None:intergenic |
| AGCTAAAAGAGGATTAGCCA+AGG | 0.651532 | tig0033178:+16043 | None:intergenic |
| TGTAGCCCCAAAAGTTAATG+GGG | 0.658605 | tig0033178:+17514 | None:intergenic |
| GAAGTGTAACACCAGGAAGT+GGG | 0.664342 | tig0033178:+17826 | None:intergenic |
| GGAGCGGGAAGTGTAACACC+AGG | 0.669770 | tig0033178:+17819 | None:intergenic |
| GAGCCAAAATCAGTATACAC+AGG | 0.672733 | tig0033178:-15726 | Msa1450990:CDS |
| GTCCTTACTCAGGAAACCTG+TGG | 0.672973 | tig0033178:-11682 | Msa1450990:intron |
| CCTCCCAATCAAGAAACGCA+GGG | 0.677811 | tig0033178:+17303 | None:intergenic |
| ATAATTCAGATGCTATTGGG+AGG | 0.684827 | tig0033178:-15340 | Msa1450990:intron |
| TAAACCACCTAAAGCAGACG+AGG | 0.687764 | tig0033178:+17899 | None:intergenic |
| CCAAAATCAGTATACACAGG+TGG | 0.699521 | tig0033178:-15723 | Msa1450990:CDS |
| ATAGGTCTATATGTAGACTG+TGG | 0.700595 | tig0033178:-17551 | Msa1450990:CDS |
| ATTGATCAATAAATATGACA+TGG | 0.711264 | tig0033178:+11191 | None:intergenic |
| AAAATGACTCCTGTTTACAG+TGG | 0.720128 | tig0033178:+17463 | None:intergenic |
| TCGTTGTCAAAGTGAAACAG+GGG | 0.731053 | tig0033178:-15694 | Msa1450990:intron |
| CTGGCATTTGAACTTCCTGG+CGG | 0.735748 | tig0033178:-15552 | Msa1450990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTTTTTTTTTAAAAA+TGG | + | tig0033178:14379-14398 | None:intergenic | 0.0% |
| !! | AAAAAAATAGAAAATATTTG+GGG | + | tig0033178:11347-11366 | None:intergenic | 10.0% |
| !!! | TAGATTTAAAATTTATCATA+AGG | - | tig0033178:11498-11517 | Msa1450990:intron | 10.0% |
| !!! | TACATATTTTATATTTCTTA+GGG | + | tig0033178:14514-14533 | None:intergenic | 10.0% |
| !!! | ATACATATTTTATATTTCTT+AGG | + | tig0033178:14515-14534 | None:intergenic | 10.0% |
| !! | AATGATAATTAAGAAATAAA+AGG | - | tig0033178:15469-15488 | Msa1450990:intron | 10.0% |
| !! | ATGATAATTAAGAAATAAAA+GGG | - | tig0033178:15470-15489 | Msa1450990:intron | 10.0% |
| !! | TTGATAAAAAAAAAAAAAGT+GGG | - | tig0033178:16781-16800 | Msa1450990:intron | 10.0% |
| !! | TTATTCTCATTTATATATTA+GGG | - | tig0033178:17263-17282 | Msa1450990:intron | 10.0% |
| !! | GAGTTAAATAAATATATATA+TGG | - | tig0033178:18402-18421 | Msa1450990:five_prime_UTR | 10.0% |
| !!! | ATCTAATTTTGTAAAATATC+AGG | - | tig0033178:13703-13722 | Msa1450990:intron | 15.0% |
| !!! | ACATATTTTATATTTCTTAG+GGG | + | tig0033178:14513-14532 | None:intergenic | 15.0% |
| !! | AACAATATTTACAATAATAC+CGG | - | tig0033178:14634-14653 | Msa1450990:intron | 15.0% |
| !! | GAAATATTTATAATGAAGTA+TGG | - | tig0033178:15220-15239 | Msa1450990:intron | 15.0% |
| !! | AAATGATAATTAAGAAATAC+AGG | - | tig0033178:15593-15612 | Msa1450990:intron | 15.0% |
| !!! | AAACATCAATTTTTATTGAA+AGG | + | tig0033178:15691-15710 | None:intergenic | 15.0% |
| !!! | ATGTTTTTATACTTCTAAAT+CGG | - | tig0033178:15705-15724 | Msa1450990:CDS | 15.0% |
| !! | TAACATGACAAAAAATATAA+TGG | - | tig0033178:15746-15765 | Msa1450990:CDS | 15.0% |
| !!! | TTATTTTTCATTTAAACATC+TGG | - | tig0033178:15899-15918 | Msa1450990:intron | 15.0% |
| !!! | TATTTTTCATTTAAACATCT+GGG | - | tig0033178:15900-15919 | Msa1450990:intron | 15.0% |
| !! | GATAAAACTTGAAAAAAATT+AGG | - | tig0033178:15993-16012 | Msa1450990:CDS | 15.0% |
| !!! | TTTAAAGAAATTTTAATTGG+TGG | - | tig0033178:16030-16049 | Msa1450990:CDS | 15.0% |
| !!! | TTAAAGAAATTTTAATTGGT+GGG | - | tig0033178:16031-16050 | Msa1450990:CDS | 15.0% |
| !! | AATTTAATCAATCAAATTTG+TGG | - | tig0033178:16076-16095 | Msa1450990:CDS | 15.0% |
| !! | TTGTAACAATTAAAAATTTG+AGG | - | tig0033178:16472-16491 | Msa1450990:intron | 15.0% |
| !! | TGTAACAATTAAAAATTTGA+GGG | - | tig0033178:16473-16492 | Msa1450990:intron | 15.0% |
| !!! | CATAGTTTCTATTATATTTT+TGG | + | tig0033178:16522-16541 | None:intergenic | 15.0% |
| !! | CTTGATAAAAAAAAAAAAAG+TGG | - | tig0033178:16780-16799 | Msa1450990:intron | 15.0% |
| !!! | ATGTTTGTTTTTTTATTTCA+TGG | - | tig0033178:17120-17139 | Msa1450990:intron | 15.0% |
| !! | CTAATATATAAATGAGAATA+AGG | + | tig0033178:17264-17283 | None:intergenic | 15.0% |
| !! | CTTATTCTCATTTATATATT+AGG | - | tig0033178:17262-17281 | Msa1450990:intron | 15.0% |
| !! | GATTCATGAATTTGTATATA+GGG | + | tig0033178:11383-11402 | None:intergenic | 20.0% |
| !! | TGATTCATGAATTTGTATAT+AGG | + | tig0033178:11384-11403 | None:intergenic | 20.0% |
| !!! | TGTCTAATAGTTTTTTATTG+TGG | - | tig0033178:11556-11575 | Msa1450990:intron | 20.0% |
| !! | TAATATATCTCTTAGAATCA+TGG | + | tig0033178:12553-12572 | None:intergenic | 20.0% |
| !! | TAGATACTCTATAACTTTAT+CGG | - | tig0033178:13194-13213 | Msa1450990:intron | 20.0% |
| !!! | ATATCTCTATTTTTTCAGTT+AGG | - | tig0033178:13934-13953 | Msa1450990:intron | 20.0% |
| !!! | TATCTCTATTTTTTCAGTTA+GGG | - | tig0033178:13935-13954 | Msa1450990:intron | 20.0% |
| !! | AAATAATATGGAGTCATATA+CGG | + | tig0033178:14440-14459 | None:intergenic | 20.0% |
| !!! | CATATTTTATATTTCTTAGG+GGG | + | tig0033178:14512-14531 | None:intergenic | 20.0% |
| !! | TAATAAAAACAAGGATGTTA+AGG | + | tig0033178:14557-14576 | None:intergenic | 20.0% |
| !!! | AGATATTGGAATTTTTATGT+TGG | - | tig0033178:14712-14731 | Msa1450990:intron | 20.0% |
| !! | TAATCTAAATAAATGAACCA+CGG | + | tig0033178:14981-15000 | None:intergenic | 20.0% |
| !! | GTTACAATTATATAGTGTAT+AGG | - | tig0033178:15051-15070 | Msa1450990:intron | 20.0% |
| !!! | TTTTGCCTAAAAAAGTAAAT+AGG | - | tig0033178:15159-15178 | Msa1450990:intron | 20.0% |
| !! | TTTGCCTAAAAAAGTAAATA+GGG | - | tig0033178:15160-15179 | Msa1450990:intron | 20.0% |
| !! | AAATAAAATAATTCCAACCA+AGG | + | tig0033178:15421-15440 | None:intergenic | 20.0% |
| !! | CATGTATCACTAATATTTAA+AGG | - | tig0033178:15444-15463 | Msa1450990:intron | 20.0% |
| !!! | ATTTTGATTATGTGTGATTT+TGG | - | tig0033178:15797-15816 | Msa1450990:CDS | 20.0% |
| !! | AAGAAAAACAAGAAAAATCA+AGG | + | tig0033178:15867-15886 | None:intergenic | 20.0% |
| !!! | GGGTTTAAAGAAATTTTAAT+TGG | - | tig0033178:16027-16046 | Msa1450990:CDS | 20.0% |
| !!! | ACACACTATATTTTTTCAAT+TGG | + | tig0033178:16605-16624 | None:intergenic | 20.0% |
| !! | TAAAAAAAAAAAAAGTGGGA+AGG | - | tig0033178:16785-16804 | Msa1450990:intron | 20.0% |
| !!! | AAATAGTGTTAATTTTCACA+TGG | + | tig0033178:16887-16906 | None:intergenic | 20.0% |
| !! | AATCTATTGTCTAATATGTT+CGG | + | tig0033178:16987-17006 | None:intergenic | 20.0% |
| !!! | TTCAACTAATATTCTTTTAG+TGG | - | tig0033178:17006-17025 | Msa1450990:intron | 20.0% |
| !! | TAAATTTATTGACAACAAGA+AGG | + | tig0033178:18227-18246 | None:intergenic | 20.0% |
| !! | CACAATCATTAAATTTCATT+TGG | - | tig0033178:18294-18313 | Msa1450990:CDS | 20.0% |
| !! | ATTGATCAATAAATATGACA+TGG | + | tig0033178:18377-18396 | None:intergenic | 20.0% |
| ! | AAAAAGGTTAACAGTCTAAT+AGG | - | tig0033178:11152-11171 | Msa1450990:three_prime_UTR | 25.0% |
| ! | AAAATAGAAAATATTTGGGG+AGG | + | tig0033178:11344-11363 | None:intergenic | 25.0% |
| !! | CAATTTTTCCTTAAAGCAAT+GGG | + | tig0033178:12443-12462 | None:intergenic | 25.0% |
| !! | ACAATTTTTCCTTAAAGCAA+TGG | + | tig0033178:12444-12463 | None:intergenic | 25.0% |
| !! | ACCATTTAAAGTTTAAACCA+CGG | + | tig0033178:13025-13044 | None:intergenic | 25.0% |
| ! | AAATGGTGATAGTTATTCTT+TGG | - | tig0033178:13038-13057 | Msa1450990:intron | 25.0% |
| ! | ATAACAGCAGAAAAATCAAA+AGG | + | tig0033178:13390-13409 | None:intergenic | 25.0% |
| ! | TTACATAATTCAGATGCTAT+TGG | - | tig0033178:14221-14240 | Msa1450990:intron | 25.0% |
| ! | TACATAATTCAGATGCTATT+GGG | - | tig0033178:14222-14241 | Msa1450990:intron | 25.0% |
| !! | TTAATGTATTCAGTCTTTTC+TGG | - | tig0033178:14311-14330 | Msa1450990:intron | 25.0% |
| ! | TTATATGTAACTGACTAACT+AGG | + | tig0033178:14412-14431 | None:intergenic | 25.0% |
| ! | AATAATATGGAGTCATATAC+GGG | + | tig0033178:14439-14458 | None:intergenic | 25.0% |
| ! | ATCTGCAAGTAATAAAAACA+AGG | + | tig0033178:14566-14585 | None:intergenic | 25.0% |
| ! | AATTCCAATATCTCCAATAT+GGG | + | tig0033178:14705-14724 | None:intergenic | 25.0% |
| ! | AAATTCCAATATCTCCAATA+TGG | + | tig0033178:14706-14725 | None:intergenic | 25.0% |
| ! | GTTACATTACCTATAAACAT+TGG | + | tig0033178:14738-14757 | None:intergenic | 25.0% |
| ! | GTTTATAGGTAATGTAACTA+AGG | - | tig0033178:14740-14759 | Msa1450990:intron | 25.0% |
| !!! | ATGTCCCTATTTACTTTTTT+AGG | + | tig0033178:15167-15186 | None:intergenic | 25.0% |
| ! | ATAATGAAGTATGGAAGAAA+TGG | - | tig0033178:15229-15248 | Msa1450990:intron | 25.0% |
| ! | TTTACCTCTTGTGTAAAATA+GGG | + | tig0033178:15575-15594 | None:intergenic | 25.0% |
| !! | TTTTACCTCTTGTGTAAAAT+AGG | + | tig0033178:15576-15595 | None:intergenic | 25.0% |
| ! | ACAGGCAAATAAATCAAAAT+TGG | - | tig0033178:15611-15630 | Msa1450990:intron | 25.0% |
| !! | ATTGAAAAGTGTAGCATTTA+AGG | - | tig0033178:15642-15661 | Msa1450990:intron | 25.0% |
| !!! | TGGCTTATTTTTTACTCTTT+TGG | - | tig0033178:15766-15785 | Msa1450990:CDS | 25.0% |
| ! | CACACATAATCAAAATCAAA+GGG | + | tig0033178:15793-15812 | None:intergenic | 25.0% |
| ! | TCACACATAATCAAAATCAA+AGG | + | tig0033178:15794-15813 | None:intergenic | 25.0% |
| ! | AAAAATTAGGATGTGAGATT+AGG | - | tig0033178:16006-16025 | Msa1450990:CDS | 25.0% |
| ! | AAAATTAGGATGTGAGATTA+GGG | - | tig0033178:16007-16026 | Msa1450990:CDS | 25.0% |
| ! | GAATTTGAGAGATGAATAAA+TGG | - | tig0033178:16117-16136 | Msa1450990:CDS | 25.0% |
| !!! | TTTTTTCAATTGGTCATATC+AGG | + | tig0033178:16595-16614 | None:intergenic | 25.0% |
| !!! | TTTTTTTAGTAGGTAAAACG+TGG | - | tig0033178:16629-16648 | Msa1450990:intron | 25.0% |
| !!! | TTTTTTAGTAGGTAAAACGT+GGG | - | tig0033178:16630-16649 | Msa1450990:intron | 25.0% |
| !!! | TTTTTTATCAAGTAGCTTAG+TGG | + | tig0033178:16772-16791 | None:intergenic | 25.0% |
| !! | TTTTGGACAAGAAAAAACTT+CGG | + | tig0033178:16939-16958 | None:intergenic | 25.0% |
| !! | ATACAGAAAGGATCAAATTT+TGG | + | tig0033178:16956-16975 | None:intergenic | 25.0% |
| ! | TTTGTTAGTTACAGATATGA+TGG | + | tig0033178:17039-17058 | None:intergenic | 25.0% |
| ! | CTTGATTATCACGTTTAAAT+TGG | - | tig0033178:17392-17411 | Msa1450990:CDS | 25.0% |
| ! | AAGTAAACATTCATTTGAGA+TGG | + | tig0033178:17541-17560 | None:intergenic | 25.0% |
| ! | ATCTCAAATGAATGTTTACT+TGG | - | tig0033178:17540-17559 | Msa1450990:CDS | 25.0% |
| !! | TTATTACTATCTGATTCGTA+CGG | - | tig0033178:17683-17702 | Msa1450990:intron | 25.0% |
| ! | TTTGCTGATTACTGCTATAT+AGG | - | tig0033178:11406-11425 | Msa1450990:three_prime_UTR | 30.0% |
| TCGATATCATTTGATTAGCA+TGG | - | tig0033178:11453-11472 | Msa1450990:CDS | 30.0% | |
| TGTGGTTAATCAATGAGTTT+AGG | - | tig0033178:11574-11593 | Msa1450990:intron | 30.0% | |
| ! | CTAAAAGTGACAATCTGTTT+TGG | + | tig0033178:11931-11950 | None:intergenic | 30.0% |
| ACCTTTCATGAATCTTTATG+AGG | - | tig0033178:12298-12317 | Msa1450990:intron | 30.0% | |
| TCCTCATAAAGATTCATGAA+AGG | + | tig0033178:12302-12321 | None:intergenic | 30.0% | |
| ATAAGAGTTGAATGCAACAT+TGG | - | tig0033178:12486-12505 | Msa1450990:intron | 30.0% | |
| CATAAATGAAACGTAGCTAT+AGG | - | tig0033178:12610-12629 | Msa1450990:intron | 30.0% | |
| ! | CATTCATGTAGATTCTTTTG+GGG | + | tig0033178:12639-12658 | None:intergenic | 30.0% |
| ! | GCATTCATGTAGATTCTTTT+GGG | + | tig0033178:12640-12659 | None:intergenic | 30.0% |
| ! | TGCATTCATGTAGATTCTTT+TGG | + | tig0033178:12641-12660 | None:intergenic | 30.0% |
| TGTGTGATAGTAAAACCTAA+TGG | - | tig0033178:12661-12680 | Msa1450990:intron | 30.0% | |
| GTGTGATAGTAAAACCTAAT+GGG | - | tig0033178:12662-12681 | Msa1450990:intron | 30.0% | |
| TGTGATAGTAAAACCTAATG+GGG | - | tig0033178:12663-12682 | Msa1450990:intron | 30.0% | |
| CATCACATAAACACACAAAT+AGG | + | tig0033178:12910-12929 | None:intergenic | 30.0% | |
| CTATTTGTGTGTTTATGTGA+TGG | - | tig0033178:12908-12927 | Msa1450990:intron | 30.0% | |
| TATGGGGTAATCAAACTAAA+GGG | + | tig0033178:12985-13004 | None:intergenic | 30.0% | |
| ACCGTGGTTTAAACTTTAAA+TGG | - | tig0033178:13021-13040 | Msa1450990:intron | 30.0% | |
| AATATGTTAGTAAGCAAGCA+TGG | - | tig0033178:13284-13303 | Msa1450990:intron | 30.0% | |
| TCAGAAGCTACATAAAATTG+TGG | + | tig0033178:13418-13437 | None:intergenic | 30.0% | |
| TCAGCAGTAAATAGACTAAA+TGG | - | tig0033178:13551-13570 | Msa1450990:intron | 30.0% | |
| ! | GTCTTCTTTTCCATTTTGTA+TGG | - | tig0033178:14099-14118 | Msa1450990:intron | 30.0% |
| ! | TTCTTTTCCATTTTGTATGG+TGG | - | tig0033178:14102-14121 | Msa1450990:intron | 30.0% |
| TGACTCCATATTATTTGTGA+CGG | - | tig0033178:14444-14463 | Msa1450990:intron | 30.0% | |
| ! | TACAATAATACCGGCATTTT+TGG | - | tig0033178:14643-14662 | Msa1450990:intron | 30.0% |
| CAATATGGGTAAGATTCAAA+GGG | + | tig0033178:14691-14710 | None:intergenic | 30.0% | |
| TTATGTTGGCCAATGTTTAT+AGG | - | tig0033178:14726-14745 | Msa1450990:intron | 30.0% | |
| GGTAATGTAACTAAGGAATA+AGG | - | tig0033178:14747-14766 | Msa1450990:intron | 30.0% | |
| AGCGATTGATGAATTATCTA+AGG | + | tig0033178:14831-14850 | None:intergenic | 30.0% | |
| CATCAATACTTGTGATTTGA+GGG | + | tig0033178:14867-14886 | None:intergenic | 30.0% | |
| TCATCAATACTTGTGATTTG+AGG | + | tig0033178:14868-14887 | None:intergenic | 30.0% | |
| ATTATATAGTGTATAGGAGC+TGG | - | tig0033178:15057-15076 | Msa1450990:intron | 30.0% | |
| TTTGTGACAGTATTCATAGA+AGG | + | tig0033178:15333-15352 | None:intergenic | 30.0% | |
| ! | CTTGAGAAGAGTATATAAAG+AGG | - | tig0033178:16194-16213 | Msa1450990:intron | 30.0% |
| TGATACCATGTTGAAATTTG+GGG | + | tig0033178:16265-16284 | None:intergenic | 30.0% | |
| CTGATACCATGTTGAAATTT+GGG | + | tig0033178:16266-16285 | None:intergenic | 30.0% | |
| TCTGATACCATGTTGAAATT+TGG | + | tig0033178:16267-16286 | None:intergenic | 30.0% | |
| CTTGAGAAGAGAATATAAAG+AGG | - | tig0033178:16379-16398 | Msa1450990:intron | 30.0% | |
| AATCCCTTCTGTTGAAATTT+GGG | + | tig0033178:16451-16470 | None:intergenic | 30.0% | |
| TACCAATTGAGATAAACTCA+CGG | + | tig0033178:16666-16685 | None:intergenic | 30.0% | |
| TGAGTTTATCTCAATTGGTA+GGG | - | tig0033178:16666-16685 | Msa1450990:intron | 30.0% | |
| TCCATTTATTCACCTTTAAG+AGG | - | tig0033178:16735-16754 | Msa1450990:intron | 30.0% | |
| ACCTCTTAAAGGTGAATAAA+TGG | + | tig0033178:16739-16758 | None:intergenic | 30.0% | |
| GGTGACAGGATAAAAATATA+AGG | + | tig0033178:16918-16937 | None:intergenic | 30.0% | |
| TCGGTTTAATACATACAGAA+AGG | + | tig0033178:16968-16987 | None:intergenic | 30.0% | |
| ! | TTAGTTACAGATATGATGGA+AGG | + | tig0033178:17035-17054 | None:intergenic | 30.0% |
| ACTAACTGCTATGTTTAGTT+AGG | - | tig0033178:17058-17077 | Msa1450990:intron | 30.0% | |
| CTAACTGCTATGTTTAGTTA+GGG | - | tig0033178:17059-17078 | Msa1450990:intron | 30.0% | |
| ATGTTTAGTTAGGGCAATTA+AGG | - | tig0033178:17068-17087 | Msa1450990:intron | 30.0% | |
| TGTTTAGTTAGGGCAATTAA+GGG | - | tig0033178:17069-17088 | Msa1450990:intron | 30.0% | |
| ! | TGTTTGTTACACTGATCAAA+GGG | + | tig0033178:17101-17120 | None:intergenic | 30.0% |
| ! | ATGTTTGTTACACTGATCAA+AGG | + | tig0033178:17102-17121 | None:intergenic | 30.0% |
| !!! | ATCTGCCATTTTGATGAATT+TGG | - | tig0033178:17497-17516 | Msa1450990:CDS | 30.0% |
| GGATTCCAAATTCATCAAAA+TGG | + | tig0033178:17505-17524 | None:intergenic | 30.0% | |
| ! | ATGGTTGTTTCAGAAGATAT+AGG | - | tig0033178:17724-17743 | Msa1450990:intron | 30.0% |
| !! | AAGTTTTGACATATGGTGAA+AGG | - | tig0033178:17752-17771 | Msa1450990:CDS | 30.0% |
| !! | ATGTCATTCCAAAAAGTACT+TGG | - | tig0033178:17787-17806 | Msa1450990:CDS | 30.0% |
| ! | AATAGCTTCCAAGTACTTTT+TGG | + | tig0033178:17798-17817 | None:intergenic | 30.0% |
| !!! | GCGTACATCTTGTTATTTTT+TGG | - | tig0033178:18269-18288 | Msa1450990:intron | 30.0% |
| !! | GCAGAGTTTGATTCGTTTTA+GGG | + | tig0033178:11211-11230 | None:intergenic | 35.0% |
| !! | AGCAGAGTTTGATTCGTTTT+AGG | + | tig0033178:11212-11231 | None:intergenic | 35.0% |
| AGAACTTGAACTTGCAAATC+TGG | + | tig0033178:11630-11649 | None:intergenic | 35.0% | |
| ! | TCTGCTTTAGGTGGTTTATT+TGG | - | tig0033178:11671-11690 | Msa1450990:CDS | 35.0% |
| CTTTAGGTGGTTTATTTGGA+TGG | - | tig0033178:11675-11694 | Msa1450990:intron | 35.0% | |
| ! | ATTTGGGAGCGTAGTAATAA+CGG | + | tig0033178:11801-11820 | None:intergenic | 35.0% |
| GACCAACAGTTAATTCATAC+CGG | + | tig0033178:11851-11870 | None:intergenic | 35.0% | |
| ATAGGTCTATATGTAGACTG+TGG | - | tig0033178:12014-12033 | Msa1450990:intron | 35.0% | |
| ! | TATGAGACCCCATTAACTTT+TGG | - | tig0033178:12044-12063 | Msa1450990:intron | 35.0% |
| ! | ATGAGACCCCATTAACTTTT+GGG | - | tig0033178:12045-12064 | Msa1450990:intron | 35.0% |
| AAAATGACTCCTGTTTACAG+TGG | + | tig0033178:12105-12124 | None:intergenic | 35.0% | |
| ! | AGTTGCTTGTTGATATTGTG+AGG | - | tig0033178:12237-12256 | Msa1450990:CDS | 35.0% |
| ! | TACTGTCTTTTGGCATTTTG+GGG | + | tig0033178:12413-12432 | None:intergenic | 35.0% |
| ! | CTACTGTCTTTTGGCATTTT+GGG | + | tig0033178:12414-12433 | None:intergenic | 35.0% |
| ! | TTTCCTTAAAGCAATGGGTT+TGG | + | tig0033178:12438-12457 | None:intergenic | 35.0% |
| AAATGAAACGTAGCTATAGG+AGG | - | tig0033178:12613-12632 | Msa1450990:intron | 35.0% | |
| CAATTAAGCAAGAAAACACC+GGG | + | tig0033178:12828-12847 | None:intergenic | 35.0% | |
| CCAATTAAGCAAGAAAACAC+CGG | + | tig0033178:12829-12848 | None:intergenic | 35.0% | |
| !! | TGTTTATGTGATGGTGTTGT+TGG | - | tig0033178:12917-12936 | Msa1450990:intron | 35.0% |
| !! | GTTTATGTGATGGTGTTGTT+GGG | - | tig0033178:12918-12937 | Msa1450990:intron | 35.0% |
| !!! | TGGTGTTGTTGGGTTTTATT+TGG | - | tig0033178:12928-12947 | Msa1450990:intron | 35.0% |
| ! | ACTAAAGGGTAATTTGAGAC+AGG | + | tig0033178:12971-12990 | None:intergenic | 35.0% |
| CTATGGGGTAATCAAACTAA+AGG | + | tig0033178:12986-13005 | None:intergenic | 35.0% | |
| TAGTTTGATTACCCCATAGA+TGG | - | tig0033178:12987-13006 | Msa1450990:intron | 35.0% | |
| AGTTTGATTACCCCATAGAT+GGG | - | tig0033178:12988-13007 | Msa1450990:intron | 35.0% | |
| TAAGCAAGCATGGTTCATAT+GGG | - | tig0033178:13294-13313 | Msa1450990:intron | 35.0% | |
| !! | TATGGGTGGTGTTGTATAAA+AGG | - | tig0033178:13311-13330 | Msa1450990:intron | 35.0% |
| ACAAATGTTAAGCATCAGGA+AGG | + | tig0033178:13362-13381 | None:intergenic | 35.0% | |
| ! | TATGTAGCTTCTGAAAGTGA+AGG | - | tig0033178:13424-13443 | Msa1450990:intron | 35.0% |
| !!! | ATTCATTCTGCTGGTTTTTC+TGG | - | tig0033178:13497-13516 | Msa1450990:intron | 35.0% |
| TAAATCGGACAAAAGAGGTT+CGG | + | tig0033178:13798-13817 | None:intergenic | 35.0% | |
| !!! | TATACTGATTTTGGCTCTTC+AGG | + | tig0033178:13836-13855 | None:intergenic | 35.0% |
| TATCGTTGTCAAAGTGAAAC+AGG | - | tig0033178:13869-13888 | Msa1450990:intron | 35.0% | |
| ATCGTTGTCAAAGTGAAACA+GGG | - | tig0033178:13870-13889 | Msa1450990:intron | 35.0% | |
| ATGTTAGACTTGACAAATGC+TGG | + | tig0033178:13963-13982 | None:intergenic | 35.0% | |
| AACATTCCTTTAATTGCCAG+AGG | - | tig0033178:13978-13997 | Msa1450990:intron | 35.0% | |
| TTCAAATGCCAGAGCAAAAT+GGG | + | tig0033178:14005-14024 | None:intergenic | 35.0% | |
| GATAATCAAGACCTGAAGAA+CGG | + | tig0033178:14071-14090 | None:intergenic | 35.0% | |
| TTTCAAGCCACCATACAAAA+TGG | + | tig0033178:14112-14131 | None:intergenic | 35.0% | |
| TTTGTATGGTGGCTTGAAAT+AGG | - | tig0033178:14113-14132 | Msa1450990:intron | 35.0% | |
| GCTTGAAATAGGTTCAAGAA+TGG | - | tig0033178:14124-14143 | Msa1450990:intron | 35.0% | |
| ATAATTCAGATGCTATTGGG+AGG | - | tig0033178:14225-14244 | Msa1450990:intron | 35.0% | |
| CCAAACCGTCACAAATAATA+TGG | + | tig0033178:14452-14471 | None:intergenic | 35.0% | |
| CCATATTATTTGTGACGGTT+TGG | - | tig0033178:14449-14468 | Msa1450990:intron | 35.0% | |
| TCCACAAGTTCATTCGATAT+CGG | - | tig0033178:14606-14625 | Msa1450990:intron | 35.0% | |
| CCAATATGGGTAAGATTCAA+AGG | + | tig0033178:14692-14711 | None:intergenic | 35.0% | |
| CCTTTGAATCTTACCCATAT+TGG | - | tig0033178:14689-14708 | Msa1450990:intron | 35.0% | |
| CTTACCCATATTGGAGATAT+TGG | - | tig0033178:14698-14717 | Msa1450990:intron | 35.0% | |
| TAAGAAATAAAAGGGCAACC+CGG | - | tig0033178:15478-15497 | Msa1450990:intron | 35.0% | |
| TGTACAATACACCAAATGGT+GGG | + | tig0033178:15544-15563 | None:intergenic | 35.0% | |
| CTCTTGTGTAAAATAGGGTA+AGG | + | tig0033178:15570-15589 | None:intergenic | 35.0% | |
| ! | CTTACCCTATTTTACACAAG+AGG | - | tig0033178:15568-15587 | Msa1450990:CDS | 35.0% |
| !! | TATGTGTGATTTTGGCACTT+TGG | - | tig0033178:15805-15824 | Msa1450990:CDS | 35.0% |
| !! | TGATTTTGGCACTTTGGTTT+TGG | - | tig0033178:15811-15830 | Msa1450990:CDS | 35.0% |
| TCATTTAAACATCTGGGTCT+TGG | - | tig0033178:15906-15925 | Msa1450990:intron | 35.0% | |
| ! | GAGAAGAGTATATAAAGAGG+AGG | - | tig0033178:16197-16216 | Msa1450990:intron | 35.0% |
| CTAACTCATCCTTACAAAAC+CGG | + | tig0033178:16241-16260 | None:intergenic | 35.0% | |
| GAGAAGAGAATATAAAGAGG+AGG | - | tig0033178:16382-16401 | Msa1450990:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | + | tig0033178:16241-16260 | None:intergenic | 35.0% | |
| ATCCCTTCTGTTGAAATTTG+GGG | + | tig0033178:16450-16469 | None:intergenic | 35.0% | |
| CAATCCCTTCTGTTGAAATT+TGG | + | tig0033178:16452-16471 | None:intergenic | 35.0% | |
| !!! | GTGTGTGCACTTTTTTTAGT+AGG | - | tig0033178:16619-16638 | Msa1450990:intron | 35.0% |
| ACCAATTGAGATAAACTCAC+GGG | + | tig0033178:16665-16684 | None:intergenic | 35.0% | |
| GTGAGTTTATCTCAATTGGT+AGG | - | tig0033178:16665-16684 | Msa1450990:intron | 35.0% | |
| AGGTGAATAAATGGAGTGTA+CGG | + | tig0033178:16730-16749 | None:intergenic | 35.0% | |
| GCTAGAAATTCACCTCTTAA+AGG | + | tig0033178:16750-16769 | None:intergenic | 35.0% | |
| TTCTCGTTCATGTACAGAAA+AGG | + | tig0033178:16839-16858 | None:intergenic | 35.0% | |
| AGATGGATATACAAGCTCAA+TGG | + | tig0033178:17161-17180 | None:intergenic | 35.0% | |
| CTAATAAAAGACTCTGCAGA+CGG | + | tig0033178:17214-17233 | None:intergenic | 35.0% | |
| CTCATTAGCTGCAATATCAA+TGG | + | tig0033178:17309-17328 | None:intergenic | 35.0% | |
| AAAGACTTAATGTGACTGGA+AGG | + | tig0033178:17421-17440 | None:intergenic | 35.0% | |
| ! | TCCAGTCACATTAAGTCTTT+TGG | - | tig0033178:17421-17440 | Msa1450990:CDS | 35.0% |
| ! | TGAGATGGATTTACATACTC+TGG | + | tig0033178:17526-17545 | None:intergenic | 35.0% |
| ! | GTACTTGATGTGTTTTCAGA+TGG | - | tig0033178:17705-17724 | Msa1450990:intron | 35.0% |
| !! | GGAAGACAAGTTTTGACATA+TGG | - | tig0033178:17745-17764 | Msa1450990:CDS | 35.0% |
| ACCAAAAATTGTCCTTACTC+AGG | - | tig0033178:17873-17892 | Msa1450990:CDS | 35.0% | |
| ! | TCCTGAGTAAGGACAATTTT+TGG | + | tig0033178:17877-17896 | None:intergenic | 35.0% |
| GCTTTCAAAAAATCTTCCAC+AGG | + | tig0033178:17902-17921 | None:intergenic | 35.0% | |
| !!! | GGAAGATTTTTTGAAAGCAG+TGG | - | tig0033178:17904-17923 | Msa1450990:CDS | 35.0% |
| ! | GTCTACAGTCTCATTTTGAA+CGG | + | tig0033178:18132-18151 | None:intergenic | 35.0% |
| GAGCAATGCTGCATTATATT+CGG | - | tig0033178:18331-18350 | Msa1450990:five_prime_UTR | 35.0% | |
| AAATATGACATGGTCGTACA+TGG | + | tig0033178:18367-18386 | None:intergenic | 35.0% | |
| !!! | GAGTTTGATTCGTTTTAGGG+CGG | + | tig0033178:11208-11227 | None:intergenic | 40.0% |
| TCGATTCATTCACCATGTAC+AGG | - | tig0033178:11252-11271 | Msa1450990:three_prime_UTR | 40.0% | |
| TGAAGAAACGTTCCTGTACA+TGG | + | tig0033178:11267-11286 | None:intergenic | 40.0% | |
| TACTAACCCTGAAAGCTCTA+AGG | + | tig0033178:11292-11311 | None:intergenic | 40.0% | |
| TGAACTTGCAAATCTGGTAG+TGG | + | tig0033178:11624-11643 | None:intergenic | 40.0% | |
| AAACAATCCTCGTCTGCTTT+AGG | - | tig0033178:11659-11678 | Msa1450990:CDS | 40.0% | |
| ! | GTAGTAATAACGGTTTTCCC+AGG | + | tig0033178:11791-11810 | None:intergenic | 40.0% |
| GTTATTACTACGCTCCCAAA+TGG | - | tig0033178:11800-11819 | Msa1450990:intron | 40.0% | |
| AGGCGACTTTAACTCCATTT+GGG | + | tig0033178:11817-11836 | None:intergenic | 40.0% | |
| CACCGGTATGAATTAACTGT+TGG | - | tig0033178:11846-11865 | Msa1450990:intron | 40.0% | |
| TATAGACCTATTGAAGCAGC+AGG | + | tig0033178:12005-12024 | None:intergenic | 40.0% | |
| ! | TGAGACCCCATTAACTTTTG+GGG | - | tig0033178:12046-12065 | Msa1450990:intron | 40.0% |
| TGTAGCCCCAAAAGTTAATG+GGG | + | tig0033178:12054-12073 | None:intergenic | 40.0% | |
| GTGTAGCCCCAAAAGTTAAT+GGG | + | tig0033178:12055-12074 | None:intergenic | 40.0% | |
| TGTGTAGCCCCAAAAGTTAA+TGG | + | tig0033178:12056-12075 | None:intergenic | 40.0% | |
| !! | AAACAGGAGTCATTTTCGTG+TGG | - | tig0033178:12109-12128 | Msa1450990:CDS | 40.0% |
| ! | TCAGCTTCTAGAGAGCAAAT+GGG | - | tig0033178:12170-12189 | Msa1450990:intron | 40.0% |
| GAAGACCTATGTTCCTGAAA+TGG | - | tig0033178:12211-12230 | Msa1450990:intron | 40.0% | |
| !! | ACAACTCAGAGTATTGCTGT+TGG | - | tig0033178:12354-12373 | Msa1450990:intron | 40.0% |
| ! | CCTACTGTCTTTTGGCATTT+TGG | + | tig0033178:12415-12434 | None:intergenic | 40.0% |
| CCAAAATGCCAAAAGACAGT+AGG | - | tig0033178:12412-12431 | Msa1450990:intron | 40.0% | |
| TAGTAAAACCTAATGGGGAC+TGG | - | tig0033178:12668-12687 | Msa1450990:intron | 40.0% | |
| GGACAAAATATGGCTGACAA+AGG | + | tig0033178:12807-12826 | None:intergenic | 40.0% | |
| ! | TTGTCAGCCATATTTTGTCC+CGG | - | tig0033178:12807-12826 | Msa1450990:intron | 40.0% |
| GAAAACACCGGGACAAAATA+TGG | + | tig0033178:12817-12836 | None:intergenic | 40.0% | |
| ! | CCGGTGTTTTCTTGCTTAAT+TGG | - | tig0033178:12826-12845 | Msa1450990:intron | 40.0% |
| AGGAGGCTATATAAAACAGC+TGG | + | tig0033178:12853-12872 | None:intergenic | 40.0% | |
| GATGTAGTATGACAGTAGTC+AGG | + | tig0033178:12873-12892 | None:intergenic | 40.0% | |
| AGTTTAAACCACGGTACATG+AGG | + | tig0033178:13016-13035 | None:intergenic | 40.0% | |
| GTAAGCAAGCATGGTTCATA+TGG | - | tig0033178:13293-13312 | Msa1450990:intron | 40.0% | |
| CGTGACAAATGTTAAGCATC+AGG | + | tig0033178:13366-13385 | None:intergenic | 40.0% | |
| ! | TAGCAAGTCTTGAGGGTTTT+TGG | + | tig0033178:13468-13487 | None:intergenic | 40.0% |
| !! | AAACCCTCAAGACTTGCTAT+TGG | - | tig0033178:13469-13488 | Msa1450990:intron | 40.0% |
| !! | AGCTAAAAGAGGATTAGCCA+AGG | + | tig0033178:13525-13544 | None:intergenic | 40.0% |
| !! | GCTGATTCTGAAGCTAAAAG+AGG | + | tig0033178:13536-13555 | None:intergenic | 40.0% |
| GAGCCAAAATCAGTATACAC+AGG | - | tig0033178:13839-13858 | Msa1450990:intron | 40.0% | |
| !!! | CCACCTGTGTATACTGATTT+TGG | + | tig0033178:13845-13864 | None:intergenic | 40.0% |
| CCAAAATCAGTATACACAGG+TGG | - | tig0033178:13842-13861 | Msa1450990:intron | 40.0% | |
| TCGTTGTCAAAGTGAAACAG+GGG | - | tig0033178:13871-13890 | Msa1450990:intron | 40.0% | |
| GTTCAAATGCCAGAGCAAAA+TGG | + | tig0033178:14006-14025 | None:intergenic | 40.0% | |
| GCATAACTTGAAGGATGCTA+TGG | - | tig0033178:14039-14058 | Msa1450990:intron | 40.0% | |
| !!! | TATGGTTTTGACCGTTCTTC+AGG | - | tig0033178:14057-14076 | Msa1450990:intron | 40.0% |
| GACTTGGATACCAAAAATGC+CGG | + | tig0033178:14656-14675 | None:intergenic | 40.0% | |
| AGGGTTATGGTCTGCTTTAA+GGG | + | tig0033178:14787-14806 | None:intergenic | 40.0% | |
| ACACATTGAAGTCAGGGTTA+TGG | + | tig0033178:14800-14819 | None:intergenic | 40.0% | |
| TCCTAGACACATTGAAGTCA+GGG | + | tig0033178:14806-14825 | None:intergenic | 40.0% | |
| TGATGCCTTAGTGTGTATGT+TGG | - | tig0033178:14899-14918 | Msa1450990:intron | 40.0% | |
| CAAAGCCAACATACACACTA+AGG | + | tig0033178:14907-14926 | None:intergenic | 40.0% | |
| !! | CTTAGTGTGTATGTTGGCTT+TGG | - | tig0033178:14905-14924 | Msa1450990:intron | 40.0% |
| !! | TGTTGGCTTTGGTAGGTTTA+TGG | - | tig0033178:14916-14935 | Msa1450990:CDS | 40.0% |
| TGTCTTCAGCTTATTATCCG+TGG | - | tig0033178:14961-14980 | Msa1450990:CDS | 40.0% | |
| CCTCAAGTTTCATATGAGAG+CGG | + | tig0033178:15103-15122 | None:intergenic | 40.0% | |
| CGCTCTCATATGAAACTTGA+GGG | - | tig0033178:15101-15120 | Msa1450990:intron | 40.0% | |
| GTAAATAGGGACATCTGTTC+TGG | - | tig0033178:15173-15192 | Msa1450990:intron | 40.0% | |
| !! | TAATGCTGCTTTCTTTGCCT+TGG | - | tig0033178:15401-15420 | Msa1450990:intron | 40.0% |
| GTGTACAATACACCAAATGG+TGG | + | tig0033178:15545-15564 | None:intergenic | 40.0% | |
| GCTGTGTACAATACACCAAA+TGG | + | tig0033178:15548-15567 | None:intergenic | 40.0% | |
| GTCATGTTAACAAGTGCTCT+AGG | + | tig0033178:15735-15754 | None:intergenic | 40.0% | |
| TTTCAGTCAGTAGTGCTCTT+GGG | + | tig0033178:15838-15857 | None:intergenic | 40.0% | |
| ! | TTTTCAGTCAGTAGTGCTCT+TGG | + | tig0033178:15839-15858 | None:intergenic | 40.0% |
| ! | GAGTCTTATCTATCCGATGT+GGG | + | tig0033178:16175-16194 | None:intergenic | 40.0% |
| ! | AGAGTCTTATCTATCCGATG+TGG | + | tig0033178:16176-16195 | None:intergenic | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | - | tig0033178:16239-16258 | Msa1450990:intron | 40.0% |
| TTAGGCCCCAAATTTCAACA+TGG | - | tig0033178:16257-16276 | Msa1450990:intron | 40.0% | |
| ! | GAGTCTTATCTATCCGATGT+GGG | + | tig0033178:16175-16194 | None:intergenic | 40.0% |
| ! | AGAGTCTTATCTATCCGATG+TGG | + | tig0033178:16176-16195 | None:intergenic | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | - | tig0033178:16239-16258 | Msa1450990:intron | 40.0% |
| TTAGTAGGTAAAACGTGGGA+AGG | - | tig0033178:16634-16653 | Msa1450990:intron | 40.0% | |
| CCAATTGAGATAAACTCACG+GGG | + | tig0033178:16664-16683 | None:intergenic | 40.0% | |
| GCATTGTAATATGCATGTGC+CGG | - | tig0033178:16694-16713 | Msa1450990:intron | 40.0% | |
| CATTGTAATATGCATGTGCC+GGG | - | tig0033178:16695-16714 | Msa1450990:intron | 40.0% | |
| ATTGTAATATGCATGTGCCG+GGG | - | tig0033178:16696-16715 | Msa1450990:intron | 40.0% | |
| GTGAATAAATGGAGTGTACG+GGG | + | tig0033178:16728-16747 | None:intergenic | 40.0% | |
| GGTGAATAAATGGAGTGTAC+GGG | + | tig0033178:16729-16748 | None:intergenic | 40.0% | |
| AAAGTCTCCGTTGGAATTTG+AGG | - | tig0033178:16811-16830 | Msa1450990:intron | 40.0% | |
| AAGTCTCCGTTGGAATTTGA+GGG | - | tig0033178:16812-16831 | Msa1450990:intron | 40.0% | |
| AAAGGTCCCTCAAATTCCAA+CGG | + | tig0033178:16821-16840 | None:intergenic | 40.0% | |
| CAAGAAAAAACTTCGGTGAC+AGG | + | tig0033178:16932-16951 | None:intergenic | 40.0% | |
| AATAGATCGCAGACATCAGA+TGG | + | tig0033178:17178-17197 | None:intergenic | 40.0% | |
| GCCAAAAGACTTAATGTGAC+TGG | + | tig0033178:17425-17444 | None:intergenic | 40.0% | |
| AGTGGACGAAGTAACTTTGA+AGG | - | tig0033178:17922-17941 | Msa1450990:CDS | 40.0% | |
| ACAATGGCATCATATGGAGA+TGG | - | tig0033178:17986-18005 | Msa1450990:intron | 40.0% | |
| TTCACGCCTTAGAGCTTTCA+GGG | - | tig0033178:11283-11302 | Msa1450990:three_prime_UTR | 45.0% | |
| TTTAGGCTCGTTCGTGCAAT+AGG | - | tig0033178:11591-11610 | Msa1450990:CDS | 45.0% | |
| TTAGGCTCGTTCGTGCAATA+GGG | - | tig0033178:11592-11611 | Msa1450990:CDS | 45.0% | |
| TAAACCACCTAAAGCAGACG+AGG | + | tig0033178:11669-11688 | None:intergenic | 45.0% | |
| GGTTTATTTGGATGGCTCAC+CGG | - | tig0033178:11683-11702 | Msa1450990:intron | 45.0% | |
| GACAGAAGAAGTGGATGATC+CGG | + | tig0033178:11705-11724 | None:intergenic | 45.0% | |
| GAAGTGGGAAATCTAGAGGT+GGG | + | tig0033178:11727-11746 | None:intergenic | 45.0% | |
| GAAGTGTAACACCAGGAAGT+GGG | + | tig0033178:11742-11761 | None:intergenic | 45.0% | |
| TACATGATCAGGCAATGGAG+CGG | + | tig0033178:11765-11784 | None:intergenic | 45.0% | |
| GAGGCGACTTTAACTCCATT+TGG | + | tig0033178:11818-11837 | None:intergenic | 45.0% | |
| TCATACCGGTGATGTTTCAG+AGG | + | tig0033178:11837-11856 | None:intergenic | 45.0% | |
| TACACATTTGCTCGAACGGA+TGG | - | tig0033178:12070-12089 | Msa1450990:CDS | 45.0% | |
| ! | CCTGTTTACAGTGGTCTTGA+AGG | + | tig0033178:12096-12115 | None:intergenic | 45.0% |
| CCTTCAAGACCACTGTAAAC+AGG | - | tig0033178:12093-12112 | Msa1450990:CDS | 45.0% | |
| !! | GGAGTCATTTTCGTGTGGTT+CGG | - | tig0033178:12114-12133 | Msa1450990:intron | 45.0% |
| !! | GAGTCATTTTCGTGTGGTTC+GGG | - | tig0033178:12115-12134 | Msa1450990:intron | 45.0% |
| ! | CATTTGCTCTCTAGAAGCTG+AGG | + | tig0033178:12171-12190 | None:intergenic | 45.0% |
| ! | CTCAGCTTCTAGAGAGCAAA+TGG | - | tig0033178:12169-12188 | Msa1450990:intron | 45.0% |
| GACCTATGTTCCTGAAATGG+TGG | - | tig0033178:12214-12233 | Msa1450990:intron | 45.0% | |
| CTCCACCATTTCAGGAACAT+AGG | + | tig0033178:12219-12238 | None:intergenic | 45.0% | |
| ACAAGCAACTCCACCATTTC+AGG | + | tig0033178:12227-12246 | None:intergenic | 45.0% | |
| GAACCCTGCGTTTCTTGATT+GGG | - | tig0033178:12259-12278 | Msa1450990:CDS | 45.0% | |
| !! | CAGAGTATTGCTGTTGGAAC+TGG | - | tig0033178:12360-12379 | Msa1450990:intron | 45.0% |
| ! | GGAAAGTGTAAGTCGTCTTG+AGG | - | tig0033178:12381-12400 | Msa1450990:intron | 45.0% |
| AGGCCAAACCCATTGCTTTA+AGG | - | tig0033178:12432-12451 | Msa1450990:intron | 45.0% | |
| TCAACTTTCCAGTCCCCATT+AGG | + | tig0033178:12679-12698 | None:intergenic | 45.0% | |
| GTAGTATGACAGTAGTCAGG+AGG | + | tig0033178:12870-12889 | None:intergenic | 45.0% | |
| ! | TGGCTTGCCTTATTGAACCA+CGG | - | tig0033178:13058-13077 | Msa1450990:intron | 45.0% |
| AAACCAGTAGAACTAGCTCC+AGG | + | tig0033178:13086-13105 | None:intergenic | 45.0% | |
| CTGAAAGTGAAGGCTGAGAT+TGG | - | tig0033178:13434-13453 | Msa1450990:intron | 45.0% | |
| CCTCCAATAGCAAGTCTTGA+GGG | + | tig0033178:13475-13494 | None:intergenic | 45.0% | |
| TTGGAGGCAATTCATTCTGC+TGG | - | tig0033178:13488-13507 | Msa1450990:intron | 45.0% | |
| GAAGCTGCAAGTACTATTCG+AGG | + | tig0033178:13743-13762 | None:intergenic | 45.0% | |
| CGAATAGTACTTGCAGCTTC+TGG | - | tig0033178:13743-13762 | Msa1450990:intron | 45.0% | |
| CTGGGTAAATCGGACAAAAG+AGG | + | tig0033178:13803-13822 | None:intergenic | 45.0% | |
| ACGTGGAACACTGGGTAAAT+CGG | + | tig0033178:13813-13832 | None:intergenic | 45.0% | |
| ATGGGTCCTCTGGCAATTAA+AGG | + | tig0033178:13987-14006 | None:intergenic | 45.0% | |
| ATTCAGATGCTATTGGGAGG+CGG | - | tig0033178:14228-14247 | Msa1450990:intron | 45.0% | |
| CTGGTAAAGGGATGTATTCG+CGG | - | tig0033178:14274-14293 | Msa1450990:intron | 45.0% | |
| GCCGATATCGAATGAACTTG+TGG | + | tig0033178:14610-14629 | None:intergenic | 45.0% | |
| AGGGACTTACTGTTGTGACT+TGG | + | tig0033178:14672-14691 | None:intergenic | 45.0% | |
| CAGGGTTATGGTCTGCTTTA+AGG | + | tig0033178:14788-14807 | None:intergenic | 45.0% | |
| ACCCTGACTTCAATGTGTCT+AGG | - | tig0033178:14802-14821 | Msa1450990:intron | 45.0% | |
| CTCCTAGACACATTGAAGTC+AGG | + | tig0033178:14807-14826 | None:intergenic | 45.0% | |
| !! | GTGTGTATGTTGGCTTTGGT+AGG | - | tig0033178:14909-14928 | Msa1450990:CDS | 45.0% |
| CCGCTCTCATATGAAACTTG+AGG | - | tig0033178:15100-15119 | Msa1450990:intron | 45.0% | |
| GAAAAACCCAAGTCCCACAT+CGG | - | tig0033178:16159-16178 | Msa1450990:intron | 45.0% | |
| ATCTATCCGATGTGGGACTT+GGG | + | tig0033178:16168-16187 | None:intergenic | 45.0% | |
| TATCTATCCGATGTGGGACT+TGG | + | tig0033178:16169-16188 | None:intergenic | 45.0% | |
| !! | CCTTACAAAACCGGCTTGTA+AGG | + | tig0033178:16232-16251 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | - | tig0033178:16229-16248 | Msa1450990:intron | 45.0% |
| ! | CTTGGTGCGTGAATAGGTTT+AGG | + | tig0033178:16294-16313 | None:intergenic | 45.0% |
| GAAAAACCCAAGTCCCACAT+CGG | - | tig0033178:16159-16178 | Msa1450990:intron | 45.0% | |
| ATCTATCCGATGTGGGACTT+GGG | + | tig0033178:16168-16187 | None:intergenic | 45.0% | |
| TATCTATCCGATGTGGGACT+TGG | + | tig0033178:16169-16188 | None:intergenic | 45.0% | |
| !! | CCTTACAAAACCGGCTTGTA+AGG | + | tig0033178:16232-16251 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | - | tig0033178:16229-16248 | Msa1450990:intron | 45.0% |
| AGGCCCCAAATTTCAACAGA+AGG | - | tig0033178:16444-16463 | Msa1450990:intron | 45.0% | |
| GGCCCCAAATTTCAACAGAA+GGG | - | tig0033178:16445-16464 | Msa1450990:intron | 45.0% | |
| CCCCGTGAGTTTATCTCAAT+TGG | - | tig0033178:16661-16680 | Msa1450990:intron | 45.0% | |
| ! | ATTCTCACAGTTGCCACTTC+TGG | - | tig0033178:17329-17348 | Msa1450990:CDS | 45.0% |
| CAATGTACCTTGTCCAGAAG+TGG | + | tig0033178:17345-17364 | None:intergenic | 45.0% | |
| GCTTTCGTTTGCAGTTGATC+AGG | - | tig0033178:17443-17462 | Msa1450990:CDS | 45.0% | |
| !! | GGCAGATTTCGTAGCTTGTT+TGG | + | tig0033178:17484-17503 | None:intergenic | 45.0% |
| TTCCACAGGTTTCCTGAGTA+AGG | + | tig0033178:17888-17907 | None:intergenic | 45.0% | |
| CATTTCGTCACCTCTCACAA+TGG | - | tig0033178:17970-17989 | Msa1450990:CDS | 45.0% | |
| CCATATGATGCCATTGTGAG+AGG | + | tig0033178:17983-18002 | None:intergenic | 45.0% | |
| CCTCTCACAATGGCATCATA+TGG | - | tig0033178:17980-17999 | Msa1450990:intron | 45.0% | |
| !! | AAAAAAAATAGAAAATATTT+GGG | + | tig0033178:11348-11367 | None:intergenic | 5.0% |
| !! | AAAAAAAAATAGAAAATATT+TGG | + | tig0033178:11349-11368 | None:intergenic | 5.0% |
| !!! | AATAAATATAAACATATTTT+AGG | + | tig0033178:14165-14184 | None:intergenic | 5.0% |
| CTTCACGCCTTAGAGCTTTC+AGG | - | tig0033178:11282-11301 | Msa1450990:three_prime_UTR | 50.0% | |
| !! | CTTGCAAATCTGGTAGTGGC+AGG | + | tig0033178:11620-11639 | None:intergenic | 50.0% |
| AGCAGACGAGGATTGTTTCG+AGG | + | tig0033178:11657-11676 | None:intergenic | 50.0% | |
| ! | CAATCCTCGTCTGCTTTAGG+TGG | - | tig0033178:11662-11681 | Msa1450990:CDS | 50.0% |
| TAGAGGTGGGACAGAAGAAG+TGG | + | tig0033178:11714-11733 | None:intergenic | 50.0% | |
| GGAAGTGGGAAATCTAGAGG+TGG | + | tig0033178:11728-11747 | None:intergenic | 50.0% | |
| CCAGGAAGTGGGAAATCTAG+AGG | + | tig0033178:11731-11750 | None:intergenic | 50.0% | |
| CCTCTAGATTTCCCACTTCC+TGG | - | tig0033178:11728-11747 | Msa1450990:intron | 50.0% | |
| ! | GGAAGTGTAACACCAGGAAG+TGG | + | tig0033178:11743-11762 | None:intergenic | 50.0% |
| ACATGATCAGGCAATGGAGC+GGG | + | tig0033178:11764-11783 | None:intergenic | 50.0% | |
| !! | AGTCGCCTCTGAAACATCAC+CGG | - | tig0033178:11829-11848 | Msa1450990:CDS | 50.0% |
| GACAAATGCGACAGTGATCG+TGG | + | tig0033178:11896-11915 | None:intergenic | 50.0% | |
| ! | CAGTCTCCTGCTGCTTCAAT+AGG | - | tig0033178:11996-12015 | Msa1450990:intron | 50.0% |
| GGGCTACACATTTGCTCGAA+CGG | - | tig0033178:12066-12085 | Msa1450990:CDS | 50.0% | |
| !! | TCATTTTCGTGTGGTTCGGG+AGG | - | tig0033178:12118-12137 | Msa1450990:intron | 50.0% |
| GGAACCCTGCGTTTCTTGAT+TGG | - | tig0033178:12258-12277 | Msa1450990:CDS | 50.0% | |
| CCTCCCAATCAAGAAACGCA+GGG | + | tig0033178:12265-12284 | None:intergenic | 50.0% | |
| ACCTCCCAATCAAGAAACGC+AGG | + | tig0033178:12266-12285 | None:intergenic | 50.0% | |
| TGATTGGGAGGTCAATGAGC+AGG | - | tig0033178:12274-12293 | Msa1450990:CDS | 50.0% | |
| ! | GGGTTTGGCCTACTGTCTTT+TGG | + | tig0033178:12423-12442 | None:intergenic | 50.0% |
| ! | TACATGAGGCGCCCATCTAT+GGG | + | tig0033178:13002-13021 | None:intergenic | 50.0% |
| ! | CCAGGTACCGTGGTTCAATA+AGG | + | tig0033178:13068-13087 | None:intergenic | 50.0% |
| CCTTATTGAACCACGGTACC+TGG | - | tig0033178:13065-13084 | Msa1450990:intron | 50.0% | |
| !! | GTACCTGGAGCTAGTTCTAC+TGG | - | tig0033178:13080-13099 | Msa1450990:intron | 50.0% |
| GCAAGCATGGTTCATATGGG+TGG | - | tig0033178:13297-13316 | Msa1450990:intron | 50.0% | |
| !! | CCCTCAAGACTTGCTATTGG+AGG | - | tig0033178:13472-13491 | Msa1450990:intron | 50.0% |
| GCCTCCAATAGCAAGTCTTG+AGG | + | tig0033178:13476-13495 | None:intergenic | 50.0% | |
| !!! | TGCTGGTTTTTCTGGTGCCT+TGG | - | tig0033178:13505-13524 | Msa1450990:intron | 50.0% |
| ! | AGCTTCTGGTGTTGAGCATG+AGG | - | tig0033178:13757-13776 | Msa1450990:intron | 50.0% |
| GGACAAAAGAGGTTCGGCAA+TGG | + | tig0033178:13792-13811 | None:intergenic | 50.0% | |
| TCTTCAGGACGTGGAACACT+GGG | + | tig0033178:13821-13840 | None:intergenic | 50.0% | |
| !!! | GATTTTGGCTCTTCAGGACG+TGG | + | tig0033178:13830-13849 | None:intergenic | 50.0% |
| GCTCTGGCATTTGAACTTCC+TGG | - | tig0033178:14010-14029 | Msa1450990:intron | 50.0% | |
| CTGGCATTTGAACTTCCTGG+CGG | - | tig0033178:14013-14032 | Msa1450990:intron | 50.0% | |
| GTGGATCATTCTCAGCTGGT+GGG | - | tig0033178:14250-14269 | Msa1450990:intron | 50.0% | |
| CGCGAATACATCCCTTTACC+AGG | + | tig0033178:14276-14295 | None:intergenic | 50.0% | |
| GCGGATAACCTGAACAGCTT+GGG | + | tig0033178:15084-15103 | None:intergenic | 50.0% | |
| AGCGGATAACCTGAACAGCT+TGG | + | tig0033178:15085-15104 | None:intergenic | 50.0% | |
| ! | GCTGCTTTCTTTGCCTTGGT+TGG | - | tig0033178:15405-15424 | Msa1450990:intron | 50.0% |
| GCAATCCTCACCTTACAAGC+CGG | - | tig0033178:16219-16238 | Msa1450990:intron | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | + | tig0033178:16227-16246 | None:intergenic | 50.0% |
| !! | TTTGGGCTTGGTGCGTGAAT+AGG | + | tig0033178:16300-16319 | None:intergenic | 50.0% |
| GCAATCCTCACCTTACAAGC+CGG | - | tig0033178:16219-16238 | Msa1450990:intron | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | + | tig0033178:16227-16246 | None:intergenic | 50.0% |
| GTAGGTAAAACGTGGGAAGG+TGG | - | tig0033178:16637-16656 | Msa1450990:intron | 50.0% | |
| GGAAGGTAGAAAGTCTCCGT+TGG | - | tig0033178:16802-16821 | Msa1450990:intron | 50.0% | |
| ! | ACAGTTGCCACTTCTGGACA+AGG | - | tig0033178:17335-17354 | Msa1450990:CDS | 50.0% |
| GTCCTTACTCAGGAAACCTG+TGG | - | tig0033178:17883-17902 | Msa1450990:CDS | 50.0% | |
| !! | CTGCTCACTGATTCGTAGCT+TGG | + | tig0033178:18103-18122 | None:intergenic | 50.0% |
| GGCGCTACATGATCAGGCAA+TGG | + | tig0033178:11770-11789 | None:intergenic | 55.0% | |
| TTGCCTGATCATGTAGCGCC+TGG | - | tig0033178:11770-11789 | Msa1450990:intron | 55.0% | |
| TGCCTGATCATGTAGCGCCT+GGG | - | tig0033178:11771-11790 | Msa1450990:intron | 55.0% | |
| TTCCCAGGCGCTACATGATC+AGG | + | tig0033178:11776-11795 | None:intergenic | 55.0% | |
| !! | TTTTCGTGTGGTTCGGGAGG+TGG | - | tig0033178:12121-12140 | Msa1450990:intron | 55.0% |
| ! | GGCAATTGGTGGCAATGTGC+AGG | - | tig0033178:12145-12164 | Msa1450990:intron | 55.0% |
| CCCTGCGTTTCTTGATTGGG+AGG | - | tig0033178:12262-12281 | Msa1450990:CDS | 55.0% | |
| ! | ACATGAGGCGCCCATCTATG+GGG | + | tig0033178:13001-13020 | None:intergenic | 55.0% |
| ! | GTACATGAGGCGCCCATCTA+TGG | + | tig0033178:13003-13022 | None:intergenic | 55.0% |
| ! | AGAACTAGCTCCAGGTACCG+TGG | + | tig0033178:13078-13097 | None:intergenic | 55.0% |
| CTCTTCAGGACGTGGAACAC+TGG | + | tig0033178:13822-13841 | None:intergenic | 55.0% | |
| CCAGAGCAAAATGGGTCCTC+TGG | + | tig0033178:13997-14016 | None:intergenic | 55.0% | |
| ! | CCAGAGGACCCATTTTGCTC+TGG | - | tig0033178:13994-14013 | Msa1450990:intron | 55.0% |
| CATTTGAACTTCCTGGCGGC+TGG | - | tig0033178:14017-14036 | Msa1450990:intron | 55.0% | |
| ! | TTCAAGTTATGCCAGCCGCC+AGG | + | tig0033178:14031-14050 | None:intergenic | 55.0% |
| TGGCGGCTGGCATAACTTGA+AGG | - | tig0033178:14030-14049 | Msa1450990:intron | 55.0% | |
| GGTGGATCATTCTCAGCTGG+TGG | - | tig0033178:14249-14268 | Msa1450990:intron | 55.0% | |
| ACTAGAGCTCCCGCATATGC+AGG | - | tig0033178:15504-15523 | Msa1450990:intron | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | - | tig0033178:15505-15524 | Msa1450990:intron | 55.0% | |
| !! | ACCAAGCCCAAAGAGTGCTG+AGG | - | tig0033178:16308-16327 | Msa1450990:intron | 55.0% |
| !! | CCAAGCCCAAAGAGTGCTGA+GGG | - | tig0033178:16309-16328 | Msa1450990:intron | 55.0% |
| !! | CAAGCCCAAAGAGTGCTGAG+GGG | - | tig0033178:16310-16329 | Msa1450990:intron | 55.0% |
| !! | AAGCCCAAAGAGTGCTGAGG+GGG | - | tig0033178:16311-16330 | Msa1450990:intron | 55.0% |
| AGTGTACGGGGTTCAAACCC+CGG | + | tig0033178:16716-16735 | None:intergenic | 55.0% | |
| ! | GGAGCGGGAAGTGTAACACC+AGG | + | tig0033178:11749-11768 | None:intergenic | 60.0% |
| GTTCGGGAGGTGGAGGCAAT+TGG | - | tig0033178:12131-12150 | Msa1450990:intron | 60.0% | |
| CAGATGCTATTGGGAGGCGG+TGG | - | tig0033178:14231-14250 | Msa1450990:intron | 60.0% | |
| GGCGGTGGATCATTCTCAGC+TGG | - | tig0033178:14246-14265 | Msa1450990:intron | 60.0% | |
| ! | TCATTCTCAGCTGGTGGGCC+TGG | - | tig0033178:14255-14274 | Msa1450990:intron | 60.0% |
| ! | TCAGCTGGTGGGCCTGGTAA+AGG | - | tig0033178:14261-14280 | Msa1450990:intron | 60.0% |
| ! | CAGCTGGTGGGCCTGGTAAA+GGG | - | tig0033178:14262-14281 | Msa1450990:intron | 60.0% |
| GAGCTGGACCCAAGCTGTTC+AGG | - | tig0033178:15073-15092 | Msa1450990:intron | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | + | tig0033178:15500-15519 | None:intergenic | 60.0% |
| TTCCCGGACCCTGCATATGC+GGG | + | tig0033178:15516-15535 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | tig0033178:15517-15536 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | - | tig0033178:15516-15535 | Msa1450990:CDS | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | - | tig0033178:15517-15536 | Msa1450990:CDS | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | tig0033178:15532-15551 | None:intergenic | 60.0% |
| CCCTCAGCACTCTTTGGGCT+TGG | + | tig0033178:16312-16331 | None:intergenic | 60.0% | |
| !! | AGCCCAAAGAGTGCTGAGGG+GGG | - | tig0033178:16312-16331 | Msa1450990:intron | 60.0% |
| ACCCCCCCTCAGCACTCTTT+GGG | + | tig0033178:16317-16336 | None:intergenic | 60.0% | |
| ! | AGTGCTGAGGGGGGGTGTAT+TGG | - | tig0033178:16321-16340 | Msa1450990:intron | 60.0% |
| ! | GTGCTGAGGGGGGGTGTATT+GGG | - | tig0033178:16322-16341 | Msa1450990:intron | 60.0% |
| ! | TCGTGTGGTTCGGGAGGTGG+AGG | - | tig0033178:12124-12143 | Msa1450990:intron | 65.0% |
| CGGGAGGTGGAGGCAATTGG+TGG | - | tig0033178:12134-12153 | Msa1450990:intron | 65.0% | |
| GATGGGCGCCTCATGTACCG+TGG | - | tig0033178:13005-13024 | Msa1450990:intron | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | + | tig0033178:15499-15518 | None:intergenic | 65.0% |
| GCTCCCGCATATGCAGGGTC+CGG | - | tig0033178:15510-15529 | Msa1450990:CDS | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | tig0033178:15511-15530 | Msa1450990:CDS | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | - | tig0033178:15515-15534 | Msa1450990:CDS | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | tig0033178:15530-15549 | Msa1450990:CDS | 65.0% | |
| !! | GCCCAAAGAGTGCTGAGGGG+GGG | - | tig0033178:16313-16332 | Msa1450990:intron | 65.0% |
| CACCCCCCCTCAGCACTCTT+TGG | + | tig0033178:16318-16337 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0033178 | gene | 11143 | 18444 | 11143 | ID=Msa1450990;Name=Msa1450990 |
| tig0033178 | mRNA | 11143 | 18444 | 11143 | ID=Msa1450990-mRNA-1;Parent=Msa1450990;Name=Msa1450990-mRNA-1;_AED=0.11;_eAED=0.11;_QI=123|1|1|1|1|1|13|303|510 |
| tig0033178 | exon | 11143 | 11498 | 11143 | ID=Msa1450990-mRNA-1:exon:17796;Parent=Msa1450990-mRNA-1 |
| tig0033178 | exon | 11580 | 11692 | 11580 | ID=Msa1450990-mRNA-1:exon:17795;Parent=Msa1450990-mRNA-1 |
| tig0033178 | exon | 11814 | 11863 | 11814 | ID=Msa1450990-mRNA-1:exon:17794;Parent=Msa1450990-mRNA-1 |
| tig0033178 | exon | 12060 | 12130 | 12060 | ID=Msa1450990-mRNA-1:exon:17793;Parent=Msa1450990-mRNA-1 |
| tig0033178 | exon | 12231 | 12303 | 12231 | ID=Msa1450990-mRNA-1:exon:17792;Parent=Msa1450990-mRNA-1 |
| tig0033178 | exon | 14906 | 15003 | 14906 | ID=Msa1450990-mRNA-1:exon:17791;Parent=Msa1450990-mRNA-1 |
| tig0033178 | exon | 15287 | 15353 | 15287 | ID=Msa1450990-mRNA-1:exon:17790;Parent=Msa1450990-mRNA-1 |
| tig0033178 | exon | 15509 | 15589 | 15509 | ID=Msa1450990-mRNA-1:exon:17789;Parent=Msa1450990-mRNA-1 |
| tig0033178 | exon | 15695 | 15862 | 15695 | ID=Msa1450990-mRNA-1:exon:17788;Parent=Msa1450990-mRNA-1 |
| tig0033178 | exon | 15989 | 16156 | 15989 | ID=Msa1450990-mRNA-1:exon:17787;Parent=Msa1450990-mRNA-1 |
| tig0033178 | exon | 17292 | 17588 | 17292 | ID=Msa1450990-mRNA-1:exon:17786;Parent=Msa1450990-mRNA-1 |
| tig0033178 | exon | 17737 | 17991 | 17737 | ID=Msa1450990-mRNA-1:exon:17785;Parent=Msa1450990-mRNA-1 |
| tig0033178 | exon | 18283 | 18444 | 18283 | ID=Msa1450990-mRNA-1:exon:17784;Parent=Msa1450990-mRNA-1 |
| tig0033178 | five_prime_UTR | 18322 | 18444 | 18322 | ID=Msa1450990-mRNA-1:five_prime_utr;Parent=Msa1450990-mRNA-1 |
| tig0033178 | CDS | 18283 | 18321 | 18283 | ID=Msa1450990-mRNA-1:cds;Parent=Msa1450990-mRNA-1 |
| tig0033178 | CDS | 17737 | 17991 | 17737 | ID=Msa1450990-mRNA-1:cds;Parent=Msa1450990-mRNA-1 |
| tig0033178 | CDS | 17292 | 17588 | 17292 | ID=Msa1450990-mRNA-1:cds;Parent=Msa1450990-mRNA-1 |
| tig0033178 | CDS | 15989 | 16156 | 15989 | ID=Msa1450990-mRNA-1:cds;Parent=Msa1450990-mRNA-1 |
| tig0033178 | CDS | 15695 | 15862 | 15695 | ID=Msa1450990-mRNA-1:cds;Parent=Msa1450990-mRNA-1 |
| tig0033178 | CDS | 15509 | 15589 | 15509 | ID=Msa1450990-mRNA-1:cds;Parent=Msa1450990-mRNA-1 |
| tig0033178 | CDS | 15287 | 15353 | 15287 | ID=Msa1450990-mRNA-1:cds;Parent=Msa1450990-mRNA-1 |
| tig0033178 | CDS | 14906 | 15003 | 14906 | ID=Msa1450990-mRNA-1:cds;Parent=Msa1450990-mRNA-1 |
| tig0033178 | CDS | 12231 | 12303 | 12231 | ID=Msa1450990-mRNA-1:cds;Parent=Msa1450990-mRNA-1 |
| tig0033178 | CDS | 12060 | 12130 | 12060 | ID=Msa1450990-mRNA-1:cds;Parent=Msa1450990-mRNA-1 |
| tig0033178 | CDS | 11814 | 11863 | 11814 | ID=Msa1450990-mRNA-1:cds;Parent=Msa1450990-mRNA-1 |
| tig0033178 | CDS | 11580 | 11692 | 11580 | ID=Msa1450990-mRNA-1:cds;Parent=Msa1450990-mRNA-1 |
| tig0033178 | CDS | 11446 | 11498 | 11446 | ID=Msa1450990-mRNA-1:cds;Parent=Msa1450990-mRNA-1 |
| tig0033178 | three_prime_UTR | 11143 | 11445 | 11143 | ID=Msa1450990-mRNA-1:three_prime_utr;Parent=Msa1450990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
