Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0708170 | XP_013463822.1 | 72.855 | 571 | 153 | 2 | 3 | 572 | 1 | 570 | 0.0 | 863 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0708170 | A0A072V7U4 | 72.855 | 571 | 153 | 2 | 3 | 572 | 1 | 570 | 0.0 | 863 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012340 | Msa0708170 | 0.940776 | 1.306960e-100 | -8.615850e-47 |
| Msa0708170 | Msa1026900 | 0.930049 | 2.880119e-93 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0708170 | MtrunA17_Chr2g0304851 | 77.865 | 384 | 66 | 1 | 3 | 386 | 1 | 365 | 0.0 | 625 |
| Msa0708170 | MtrunA17_Chr1g0167871 | 62.124 | 499 | 175 | 6 | 2 | 496 | 198 | 686 | 0.0 | 622 |
| Msa0708170 | MtrunA17_Chr5g0393521 | 53.271 | 321 | 122 | 3 | 253 | 572 | 1 | 294 | 1.45e-111 | 335 |
| Msa0708170 | MtrunA17_Chr7g0231491 | 66.376 | 229 | 74 | 1 | 2 | 227 | 27 | 255 | 1.87e-102 | 310 |
| Msa0708170 | MtrunA17_Chr7g0223511 | 66.977 | 215 | 45 | 3 | 1 | 215 | 22 | 210 | 6.27e-93 | 285 |
| Msa0708170 | MtrunA17_Chr5g0393531 | 62.443 | 221 | 73 | 2 | 8 | 228 | 2 | 212 | 2.39e-91 | 280 |
| Msa0708170 | MtrunA17_Chr8g0347361 | 73.256 | 172 | 40 | 2 | 1 | 172 | 9 | 174 | 4.36e-82 | 255 |
| Msa0708170 | MtrunA17_Chr5g0420451 | 61.058 | 208 | 68 | 1 | 8 | 215 | 3 | 197 | 5.36e-82 | 256 |
| Msa0708170 | MtrunA17_Chr5g0417421 | 62.567 | 187 | 65 | 1 | 292 | 478 | 108 | 289 | 3.69e-78 | 248 |
| Msa0708170 | MtrunA17_Chr5g0417421 | 64.211 | 95 | 24 | 2 | 121 | 215 | 18 | 102 | 5.22e-31 | 122 |
| Msa0708170 | MtrunA17_Chr4g0026601 | 67.974 | 153 | 44 | 1 | 28 | 180 | 35 | 182 | 6.73e-65 | 210 |
| Msa0708170 | MtrunA17_Chr8g0372151 | 45.926 | 270 | 49 | 3 | 9 | 278 | 8 | 180 | 1.35e-64 | 210 |
| Msa0708170 | MtrunA17_Chr6g0462951 | 63.768 | 138 | 50 | 0 | 88 | 225 | 2 | 139 | 2.05e-62 | 202 |
| Msa0708170 | MtrunA17_Chr4g0044661 | 30.328 | 488 | 268 | 11 | 1 | 479 | 1 | 425 | 7.00e-61 | 209 |
| Msa0708170 | MtrunA17_Chr6g0481111 | 70.370 | 135 | 39 | 1 | 9 | 142 | 3 | 137 | 7.72e-59 | 192 |
| Msa0708170 | MtrunA17_Chr1g0172341 | 72.072 | 111 | 31 | 0 | 8 | 118 | 4 | 114 | 3.65e-49 | 166 |
| Msa0708170 | MtrunA17_Chr5g0393801 | 60.377 | 106 | 42 | 0 | 9 | 114 | 3 | 108 | 1.03e-39 | 140 |
| Msa0708170 | MtrunA17_Chr7g0234461 | 63.542 | 96 | 35 | 0 | 46 | 141 | 1 | 96 | 1.20e-36 | 132 |
| Msa0708170 | MtrunA17_Chr5g0421991 | 33.981 | 206 | 130 | 3 | 253 | 457 | 1 | 201 | 9.16e-28 | 112 |
| Msa0708170 | MtrunA17_Chr6g0453011 | 61.290 | 93 | 14 | 1 | 2 | 72 | 28 | 120 | 1.37e-26 | 104 |
| Msa0708170 | MtrunA17_Chr1g0171051 | 31.624 | 234 | 122 | 7 | 1 | 196 | 41 | 274 | 3.51e-26 | 110 |
| Msa0708170 | MtrunA17_Chr1g0148611 | 36.970 | 165 | 99 | 4 | 53 | 215 | 2 | 163 | 4.07e-23 | 96.3 |
| Msa0708170 | MtrunA17_Chr1g0206481 | 28.873 | 284 | 183 | 8 | 6 | 281 | 3 | 275 | 1.63e-22 | 98.2 |
| Msa0708170 | MtrunA17_Chr7g0231501 | 50.000 | 78 | 39 | 0 | 211 | 288 | 2 | 79 | 9.09e-21 | 86.7 |
| Msa0708170 | MtrunA17_Chr2g0278111 | 25.685 | 292 | 195 | 7 | 14 | 294 | 8 | 288 | 2.69e-20 | 92.0 |
| Msa0708170 | MtrunA17_Chr5g0411141 | 25.685 | 292 | 195 | 7 | 14 | 294 | 9 | 289 | 2.91e-20 | 92.0 |
| Msa0708170 | MtrunA17_Chr8g0363071 | 37.324 | 142 | 86 | 3 | 70 | 209 | 18 | 158 | 6.37e-20 | 87.0 |
| Msa0708170 | MtrunA17_Chr2g0280031 | 28.509 | 228 | 149 | 4 | 28 | 242 | 3 | 229 | 5.36e-19 | 87.4 |
| Msa0708170 | MtrunA17_Chr5g0423441 | 26.695 | 236 | 162 | 5 | 14 | 242 | 8 | 239 | 6.44e-19 | 86.7 |
| Msa0708170 | MtrunA17_Chr5g0426561 | 76.087 | 46 | 11 | 0 | 9 | 54 | 3 | 48 | 9.02e-19 | 80.5 |
| Msa0708170 | MtrunA17_Chr5g0421841 | 28.641 | 206 | 136 | 5 | 14 | 212 | 8 | 209 | 2.38e-17 | 81.3 |
| Msa0708170 | MtrunA17_Chr6g0469931 | 29.694 | 229 | 149 | 7 | 22 | 244 | 18 | 240 | 2.93e-15 | 79.0 |
| Msa0708170 | MtrunA17_Chr6g0464321 | 73.171 | 41 | 11 | 0 | 9 | 49 | 3 | 43 | 2.30e-14 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0708170 | AT2G05642.1 | 23.761 | 585 | 338 | 24 | 25 | 572 | 19 | 532 | 1.91e-18 | 89.4 |
| Msa0708170 | AT1G52950.1 | 22.967 | 418 | 284 | 14 | 15 | 410 | 8 | 409 | 3.87e-17 | 85.1 |
Find 129 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAATTCTGTTGCTGAAAA+AGG | 0.130039 | 4_4:-81653607 | Msa0708170:CDS |
| TTCAGCCAAGTCATCCATTA+TGG | 0.207746 | 4_4:+81654193 | None:intergenic |
| CCCTGAGATCAATCTCTTTC+GGG | 0.209111 | 4_4:-81655038 | Msa0708170:CDS |
| CCCGACACAATCTCAGAAAA+TGG | 0.223390 | 4_4:+81655642 | None:intergenic |
| CTGAGATTGTGTCGGGAAAA+TGG | 0.226545 | 4_4:-81655635 | Msa0708170:CDS |
| TCACAAACAAGAAAGATTTC+TGG | 0.266324 | 4_4:-81656057 | Msa0708170:CDS |
| AGCCACTGATTGGTGTAATC+TGG | 0.275824 | 4_4:+81653689 | None:intergenic |
| TAAGTATTTGATACACTTAA+TGG | 0.280049 | 4_4:+81655094 | None:intergenic |
| CTTTGAATTTCCTCCCATAA+TGG | 0.288516 | 4_4:-81654207 | Msa0708170:CDS |
| AACTCGACGGGTCTTACTTT+TGG | 0.312179 | 4_4:+81656091 | None:intergenic |
| CCTGAGACAGGGGCAGAATC+TGG | 0.316365 | 4_4:+81654819 | None:intergenic |
| TTGTCCCCTTTAGCAATCTT+TGG | 0.325042 | 4_4:+81654603 | None:intergenic |
| TCATTAGAAGCGGTTGGATT+AGG | 0.329939 | 4_4:+81653882 | None:intergenic |
| AAGCTTTCATTGACCGAGTC+AGG | 0.334605 | 4_4:-81654097 | Msa0708170:CDS |
| TCCCTGAGATCAATCTCTTT+CGG | 0.336045 | 4_4:-81655039 | Msa0708170:CDS |
| ATCACAAGTATAAATTGATA+TGG | 0.344326 | 4_4:-81655731 | Msa0708170:CDS |
| ATCCAGTGTACACAGTCTTA+TGG | 0.354953 | 4_4:-81654884 | Msa0708170:CDS |
| TTGAACTTAATGCTAGGGTT+AGG | 0.355302 | 4_4:+81655666 | None:intergenic |
| TAAGGATGGCAAGGAGCATT+TGG | 0.363399 | 4_4:-81655996 | Msa0708170:CDS |
| AATAATCATACCACAAGGTT+GGG | 0.368682 | 4_4:+81654065 | None:intergenic |
| CCAGATTCTGCCCCTGTCTC+AGG | 0.375552 | 4_4:-81654819 | Msa0708170:CDS |
| TTGCAGGTGTGATCTCATTA+TGG | 0.379405 | 4_4:+81653512 | None:intergenic |
| CTCAGGGATGTTCTCATTGA+TGG | 0.381168 | 4_4:+81655054 | None:intergenic |
| CGCGAGGTGACTCAGATGTT+AGG | 0.383445 | 4_4:-81654374 | Msa0708170:CDS |
| CAAACTACTTACAGTTGAAA+TGG | 0.384017 | 4_4:+81653851 | None:intergenic |
| GACATCAGCTGCTCATCTTT+AGG | 0.385108 | 4_4:+81654917 | None:intergenic |
| GTAATCTGGGTCAAACCATC+AGG | 0.388666 | 4_4:+81653703 | None:intergenic |
| GAAACTAAATGTTCGAGTTA+AGG | 0.394600 | 4_4:-81656035 | Msa0708170:CDS |
| TTAAGGCGCCAAAATGGAAA+TGG | 0.397181 | 4_4:-81656119 | None:intergenic |
| GGACAAATGGACTGTTGTTA+AGG | 0.403910 | 4_4:-81656014 | Msa0708170:CDS |
| ATTCAAGTTGTTATTCCAAC+TGG | 0.408476 | 4_4:-81655852 | Msa0708170:CDS |
| AAGTATTTGATACACTTAAT+GGG | 0.409633 | 4_4:+81655095 | None:intergenic |
| TCAGCCAAGTCATCCATTAT+GGG | 0.420555 | 4_4:+81654194 | None:intergenic |
| CTATGGTCTTTAAGGTCAAA+TGG | 0.421947 | 4_4:-81654166 | Msa0708170:CDS |
| GCATTCTTTAAGCCACTGAT+TGG | 0.425871 | 4_4:+81653679 | None:intergenic |
| AACAGTTCTGTCCATGTCAT+AGG | 0.434723 | 4_4:+81654412 | None:intergenic |
| TTCTGTAAACTGCACTTTGT+GGG | 0.438600 | 4_4:-81655317 | Msa0708170:CDS |
| CGCTACTGTCAGCTGAATGA+AGG | 0.449869 | 4_4:-81655472 | Msa0708170:CDS |
| TCCTCCCATAATGGATGACT+TGG | 0.453063 | 4_4:-81654198 | Msa0708170:CDS |
| TATCATGTTACTGCGGAGTT+GGG | 0.456873 | 4_4:+81654340 | None:intergenic |
| TGTTATTCCAACTGGTTACA+AGG | 0.460003 | 4_4:-81655844 | Msa0708170:CDS |
| ACAGCTAGATTCTCAATCTC+TGG | 0.465810 | 4_4:+81653930 | None:intergenic |
| TTTAACAAGGATAGGAAAGA+AGG | 0.471359 | 4_4:-81655268 | Msa0708170:CDS |
| AGAAAGACTCTCGCAACTCA+TGG | 0.471366 | 4_4:+81653648 | None:intergenic |
| TCCCGAAAGAGATTGATCTC+AGG | 0.477644 | 4_4:+81655037 | None:intergenic |
| GAATCTGGGAATTAGATAGA+AGG | 0.478851 | 4_4:+81654834 | None:intergenic |
| TGAACTTAATGCTAGGGTTA+GGG | 0.480649 | 4_4:+81655667 | None:intergenic |
| ACATCTTCATTAGAAGCGGT+TGG | 0.481108 | 4_4:+81653876 | None:intergenic |
| GTCAGCTGAATGAAGGGAAT+GGG | 0.483197 | 4_4:-81655465 | Msa0708170:CDS |
| ATCAGTGGCTTAAAGAATGC+TGG | 0.483558 | 4_4:-81653676 | Msa0708170:CDS |
| ATACTGAGACCGAGATTGTC+AGG | 0.487969 | 4_4:-81654551 | Msa0708170:intron |
| GTATCATGTTACTGCGGAGT+TGG | 0.488551 | 4_4:+81654339 | None:intergenic |
| ATGTTCGAGTTAAGGACAAA+TGG | 0.490659 | 4_4:-81656027 | Msa0708170:CDS |
| GGGAGGAAATTCAAAGCGAT+TGG | 0.492909 | 4_4:+81654214 | None:intergenic |
| GGTCCTCTTCAGTAGCAACT+TGG | 0.493894 | 4_4:+81654855 | None:intergenic |
| TCTGTTGTATGTTACAAAGA+AGG | 0.495254 | 4_4:-81654122 | Msa0708170:CDS |
| CTGAGACAGGGGCAGAATCT+GGG | 0.495844 | 4_4:+81654820 | None:intergenic |
| AAGTGTCCAAAGATTGCTAA+AGG | 0.496090 | 4_4:-81654609 | Msa0708170:CDS |
| TAATAATCATACCACAAGGT+TGG | 0.496202 | 4_4:+81654064 | None:intergenic |
| AGTGTCCAAAGATTGCTAAA+GGG | 0.496382 | 4_4:-81654608 | Msa0708170:CDS |
| TGCCCATCGTCACATGTGTA+AGG | 0.499698 | 4_4:+81654576 | None:intergenic |
| AAGACTGTGTACACTGGATC+TGG | 0.503556 | 4_4:+81654888 | None:intergenic |
| AATGGCTTGAACTTAATGCT+AGG | 0.510979 | 4_4:+81655660 | None:intergenic |
| GCCACTGATTGGTGTAATCT+GGG | 0.513566 | 4_4:+81653690 | None:intergenic |
| TCAGTTGCAGCCATCTTATG+AGG | 0.515548 | 4_4:+81653556 | None:intergenic |
| CAAGCTGGATAACCTGAGAC+AGG | 0.518189 | 4_4:+81654807 | None:intergenic |
| AGATCAATCTCTTTCGGGAA+AGG | 0.520159 | 4_4:-81655033 | Msa0708170:intron |
| TTTCTGTAAACTGCACTTTG+TGG | 0.521710 | 4_4:-81655318 | Msa0708170:CDS |
| GCGAGGTGACTCAGATGTTA+GGG | 0.521994 | 4_4:-81654373 | Msa0708170:CDS |
| TCATTAAGTTTAACAAGGAT+AGG | 0.522536 | 4_4:-81655276 | Msa0708170:CDS |
| TGAAATTACTCCTCATAAGA+TGG | 0.524440 | 4_4:-81653566 | Msa0708170:CDS |
| TGTCAGCTGAATGAAGGGAA+TGG | 0.527101 | 4_4:-81655466 | Msa0708170:CDS |
| CAAAACAGACTTCATCAAAG+AGG | 0.529735 | 4_4:-81653492 | Msa0708170:CDS |
| CCCGAAAGAGATTGATCTCA+GGG | 0.531026 | 4_4:+81655038 | None:intergenic |
| ATGGCTTGAACTTAATGCTA+GGG | 0.536346 | 4_4:+81655661 | None:intergenic |
| ACTCCGCAGTAACATGATAC+AGG | 0.538727 | 4_4:-81654336 | Msa0708170:intron |
| AAGTATAAATTGATATGGAC+TGG | 0.538846 | 4_4:-81655726 | Msa0708170:CDS |
| GACTGTTGTTAAGGATGGCA+AGG | 0.547769 | 4_4:-81656005 | Msa0708170:CDS |
| GTCCTCTTCAGTAGCAACTT+GGG | 0.548162 | 4_4:+81654856 | None:intergenic |
| ACAGAGCAAGATTTCCACCT+TGG | 0.548824 | 4_4:+81654140 | None:intergenic |
| TGAGGAGTAATTTCAACAGT+AGG | 0.550787 | 4_4:+81653574 | None:intergenic |
| AAATTCATACCACGTCAAGC+TGG | 0.552957 | 4_4:+81654792 | None:intergenic |
| TGCTAGGGTTAGGGATGTCG+TGG | 0.554820 | 4_4:+81655676 | None:intergenic |
| TACTGCAAGATCAAAGAAGA+AGG | 0.556084 | 4_4:-81655220 | Msa0708170:intron |
| TCTAGCTGTTGATGTGATGA+TGG | 0.556499 | 4_4:-81653916 | Msa0708170:CDS |
| GAAAGACTCTCGCAACTCAT+GGG | 0.563641 | 4_4:+81653649 | None:intergenic |
| TAGTTAAGCATAACTATGAC+AGG | 0.563843 | 4_4:+81655241 | None:intergenic |
| AAATGGACTGTTGTTAAGGA+TGG | 0.564477 | 4_4:-81656010 | Msa0708170:CDS |
| CACCCAAGTTGCTACTGAAG+AGG | 0.565830 | 4_4:-81654858 | Msa0708170:CDS |
| GTTACTGCGGAGTTGGGCAG+CGG | 0.569978 | 4_4:+81654346 | None:intergenic |
| CAATTTATACTTGTGATCAG+AGG | 0.571382 | 4_4:+81655737 | None:intergenic |
| ATTGCAGCAATGAACTCGAC+GGG | 0.572634 | 4_4:+81656079 | None:intergenic |
| GTGTCCAAAGATTGCTAAAG+GGG | 0.572826 | 4_4:-81654607 | Msa0708170:CDS |
| CTCCTTACACATGTGACGAT+GGG | 0.577478 | 4_4:-81654578 | Msa0708170:CDS |
| GCAACAGAATTGAAAGAACC+TGG | 0.585219 | 4_4:+81653616 | None:intergenic |
| GGTAACATCTTCATTAGAAG+CGG | 0.585686 | 4_4:+81653872 | None:intergenic |
| TATAAATTGATATGGACTGG+TGG | 0.586012 | 4_4:-81655723 | Msa0708170:CDS |
| ACTTTGGTTTGAAAGACTTG+AGG | 0.589756 | 4_4:-81655426 | Msa0708170:intron |
| TCTTCTGAATATGACCCTGA+TGG | 0.592479 | 4_4:-81653718 | Msa0708170:CDS |
| GGCTAAGTTCCCCAACCTTG+TGG | 0.593205 | 4_4:-81654075 | Msa0708170:intron |
| GTTGATCATAGTTGATGCTA+AGG | 0.594007 | 4_4:-81655972 | Msa0708170:intron |
| TATAACATACCTGACAATCT+CGG | 0.594795 | 4_4:+81654542 | None:intergenic |
| ATAATCATACCACAAGGTTG+GGG | 0.595471 | 4_4:+81654066 | None:intergenic |
| AAAGTTAGATAATGTGTATG+TGG | 0.602431 | 4_4:+81655791 | None:intergenic |
| AGCTTTCATTGACCGAGTCA+GGG | 0.602620 | 4_4:-81654096 | Msa0708170:CDS |
| TTCCATAAGACTGTGTACAC+TGG | 0.603468 | 4_4:+81654882 | None:intergenic |
| CCTCCTTACACATGTGACGA+TGG | 0.604605 | 4_4:-81654579 | Msa0708170:CDS |
| TGTAAACTGCACTTTGTGGG+AGG | 0.606036 | 4_4:-81655314 | Msa0708170:CDS |
| AGTCTTTCTCAACTCACACC+AGG | 0.611490 | 4_4:-81653634 | Msa0708170:CDS |
| CAAACAGCCTTGTAACCAGT+TGG | 0.614260 | 4_4:+81655837 | None:intergenic |
| TGGGGAACTTAGCCCTGACT+CGG | 0.615150 | 4_4:+81654084 | None:intergenic |
| AAAACAGACTTCATCAAAGA+GGG | 0.616443 | 4_4:-81653491 | Msa0708170:CDS |
| AAAGTTCATTAAGTTTAACA+AGG | 0.620574 | 4_4:-81655281 | Msa0708170:CDS |
| ACCCAGATTACACCAATCAG+TGG | 0.621520 | 4_4:-81653691 | Msa0708170:CDS |
| GCTACTGTCAGCTGAATGAA+GGG | 0.623531 | 4_4:-81655471 | Msa0708170:CDS |
| AGCTGGATAACCTGAGACAG+GGG | 0.626283 | 4_4:+81654809 | None:intergenic |
| AGGTCAAATGGCAACCAAGG+TGG | 0.634130 | 4_4:-81654154 | Msa0708170:CDS |
| AAGCTGGATAACCTGAGACA+GGG | 0.638075 | 4_4:+81654808 | None:intergenic |
| TTAAGGTCAAATGGCAACCA+AGG | 0.639792 | 4_4:-81654157 | Msa0708170:CDS |
| GATTGCAGCAATGAACTCGA+CGG | 0.640629 | 4_4:+81656078 | None:intergenic |
| GCCAAGTCATCCATTATGGG+AGG | 0.650001 | 4_4:+81654197 | None:intergenic |
| CCATCGTCACATGTGTAAGG+AGG | 0.651049 | 4_4:+81654579 | None:intergenic |
| AACAAGGATAGGAAAGAAGG+TGG | 0.654602 | 4_4:-81655265 | Msa0708170:CDS |
| TAATCTGGGTCAAACCATCA+GGG | 0.657518 | 4_4:+81653704 | None:intergenic |
| GATGGATGTTTCCTATGACA+TGG | 0.657586 | 4_4:-81654423 | Msa0708170:CDS |
| TCAGGTTATCCAGCTTGACG+TGG | 0.658180 | 4_4:-81654801 | Msa0708170:intron |
| CATATTCAGAAGATGCAGAG+AGG | 0.712555 | 4_4:+81653728 | None:intergenic |
| AAACCTGTATCATGTTACTG+CGG | 0.742791 | 4_4:+81654333 | None:intergenic |
| CTAACATCTGAGTCACCTCG+CGG | 0.748415 | 4_4:+81654375 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATGCTATTTGTTTTATTAT+AGG | - | chr4_4:81653685-81653704 | Msa0708170:CDS | 15.0% |
| !!! | ATGCTATTTGTTTTATTATA+GGG | - | chr4_4:81653686-81653705 | Msa0708170:CDS | 15.0% |
| !! | TTCTGAATATATATGTTATA+GGG | + | chr4_4:81654590-81654609 | None:intergenic | 15.0% |
| !! | ATCACAAGTATAAATTGATA+TGG | - | chr4_4:81653837-81653856 | Msa0708170:intron | 20.0% |
| !!! | GTCATTTTAATAGATGTTAT+TGG | - | chr4_4:81654057-81654076 | Msa0708170:intron | 20.0% |
| !! | AAAGTTCATTAAGTTTAACA+AGG | - | chr4_4:81654287-81654306 | Msa0708170:intron | 20.0% |
| !! | AAGTATTTGATACACTTAAT+GGG | + | chr4_4:81654476-81654495 | None:intergenic | 20.0% |
| !! | TAAGTATTTGATACACTTAA+TGG | + | chr4_4:81654477-81654496 | None:intergenic | 20.0% |
| !!! | GTTCTGAATATATATGTTAT+AGG | + | chr4_4:81654591-81654610 | None:intergenic | 20.0% |
| !! | AATATAAAGACATAGAAGTT+AGG | + | chr4_4:81654618-81654637 | None:intergenic | 20.0% |
| !! | TCAATTAGTGAATTAAATGA+AGG | + | chr4_4:81655585-81655604 | None:intergenic | 20.0% |
| !! | TTTAATGTCATGTAATATCA+TGG | - | chr4_4:81655771-81655790 | Msa0708170:CDS | 20.0% |
| ! | ATAAATCACATAGTGAAAAG+TGG | + | chr4_4:81653627-81653646 | None:intergenic | 25.0% |
| ! | AAAGTTAGATAATGTGTATG+TGG | + | chr4_4:81653780-81653799 | None:intergenic | 25.0% |
| ! | AAGTATAAATTGATATGGAC+TGG | - | chr4_4:81653842-81653861 | Msa0708170:intron | 25.0% |
| ! | CAATACATGTACAGAAATTT+AGG | + | chr4_4:81654024-81654043 | None:intergenic | 25.0% |
| ! | AAAAAGCTACAAGTTAACTT+TGG | - | chr4_4:81654126-81654145 | Msa0708170:CDS | 25.0% |
| !! | AGGTGAACAACTTATATTTT+AGG | - | chr4_4:81654162-81654181 | Msa0708170:CDS | 25.0% |
| ! | TCATTAAGTTTAACAAGGAT+AGG | - | chr4_4:81654292-81654311 | Msa0708170:intron | 25.0% |
| ! | TTGTAAGTTTACATTGTCTT+TGG | - | chr4_4:81654386-81654405 | Msa0708170:CDS | 25.0% |
| !! | AGAGTTTTTAATGAAAACGT+AGG | - | chr4_4:81654444-81654463 | Msa0708170:intron | 25.0% |
| !! | GAGTTTTTAATGAAAACGTA+GGG | - | chr4_4:81654445-81654464 | Msa0708170:intron | 25.0% |
| !!! | CTTATTGATACCCTTATTTT+AGG | - | chr4_4:81655111-81655130 | Msa0708170:intron | 25.0% |
| !! | ACACATTTTCACAAACTATT+GGG | - | chr4_4:81655272-81655291 | Msa0708170:CDS | 25.0% |
| ! | TGAAAAAACTATGGTCTTTA+AGG | - | chr4_4:81655394-81655413 | Msa0708170:intron | 25.0% |
| ! | CATATAATAATCATACCACA+AGG | + | chr4_4:81655511-81655530 | None:intergenic | 25.0% |
| ! | TTATTATATGTCACAAACCT+TGG | - | chr4_4:81655521-81655540 | Msa0708170:intron | 25.0% |
| ! | ATTAGTGAATTAAATGAAGG+AGG | + | chr4_4:81655582-81655601 | None:intergenic | 25.0% |
| !! | TAATTTGTCCATCATATTTC+AGG | - | chr4_4:81655607-81655626 | Msa0708170:intron | 25.0% |
| !! | CAATAATTCAGGTTAGTAAA+AGG | + | chr4_4:81655797-81655816 | None:intergenic | 25.0% |
| ! | AACATAGTTGACAATAATTC+AGG | + | chr4_4:81655808-81655827 | None:intergenic | 25.0% |
| TCACAAACAAGAAAGATTTC+TGG | - | chr4_4:81653511-81653530 | Msa0708170:CDS | 30.0% | |
| ! | GAAACTAAATGTTCGAGTTA+AGG | - | chr4_4:81653533-81653552 | Msa0708170:CDS | 30.0% |
| !! | ATTCAAGTTGTTATTCCAAC+TGG | - | chr4_4:81653716-81653735 | Msa0708170:CDS | 30.0% |
| CAATTTATACTTGTGATCAG+AGG | + | chr4_4:81653834-81653853 | None:intergenic | 30.0% | |
| !! | TATAAATTGATATGGACTGG+TGG | - | chr4_4:81653845-81653864 | Msa0708170:intron | 30.0% |
| TCATATCCCTATACTAATTG+TGG | - | chr4_4:81654206-81654225 | Msa0708170:CDS | 30.0% | |
| GACAAACCACAATTAGTATA+GGG | + | chr4_4:81654215-81654234 | None:intergenic | 30.0% | |
| AGACAAACCACAATTAGTAT+AGG | + | chr4_4:81654216-81654235 | None:intergenic | 30.0% | |
| TTTAACAAGGATAGGAAAGA+AGG | - | chr4_4:81654300-81654319 | Msa0708170:intron | 30.0% | |
| TAGTTAAGCATAACTATGAC+AGG | + | chr4_4:81654330-81654349 | None:intergenic | 30.0% | |
| ! | TTTTTAATGAAAACGTAGGG+CGG | - | chr4_4:81654448-81654467 | Msa0708170:intron | 30.0% |
| ! | AAAGTAGTACCAACCATTTT+TGG | + | chr4_4:81654930-81654949 | None:intergenic | 30.0% |
| TATAACATACCTGACAATCT+CGG | + | chr4_4:81655029-81655048 | None:intergenic | 30.0% | |
| CCATACTTAATACGCATATA+GGG | + | chr4_4:81655059-81655078 | None:intergenic | 30.0% | |
| TCCATACTTAATACGCATAT+AGG | + | chr4_4:81655060-81655079 | None:intergenic | 30.0% | |
| ATTAAGTATGGAATGACTCT+TGG | - | chr4_4:81655068-81655087 | Msa0708170:CDS | 30.0% | |
| CAAGCTTGTACCTAAAATAA+GGG | + | chr4_4:81655124-81655143 | None:intergenic | 30.0% | |
| TCAAGCTTGTACCTAAAATA+AGG | + | chr4_4:81655125-81655144 | None:intergenic | 30.0% | |
| ! | ATAGTTTGTGAAAATGTGTG+AGG | + | chr4_4:81655271-81655290 | None:intergenic | 30.0% |
| ! | CACACATTTTCACAAACTAT+TGG | - | chr4_4:81655271-81655290 | Msa0708170:CDS | 30.0% |
| TTTCACAAACTATTGGGTTT+AGG | - | chr4_4:81655278-81655297 | Msa0708170:CDS | 30.0% | |
| AATGTTTCAACTGTCTTATC+AGG | - | chr4_4:81655322-81655341 | Msa0708170:CDS | 30.0% | |
| TCTGTTGTATGTTACAAAGA+AGG | - | chr4_4:81655446-81655465 | Msa0708170:CDS | 30.0% | |
| AATAATCATACCACAAGGTT+GGG | + | chr4_4:81655506-81655525 | None:intergenic | 30.0% | |
| TAATAATCATACCACAAGGT+TGG | + | chr4_4:81655507-81655526 | None:intergenic | 30.0% | |
| CAAACTACTTACAGTTGAAA+TGG | + | chr4_4:81655720-81655739 | None:intergenic | 30.0% | |
| TTCAATTCTGTTGCTGAAAA+AGG | - | chr4_4:81655961-81655980 | Msa0708170:intron | 30.0% | |
| TGAAATTACTCCTCATAAGA+TGG | - | chr4_4:81656002-81656021 | Msa0708170:CDS | 30.0% | |
| AAAACAGACTTCATCAAAGA+GGG | - | chr4_4:81656077-81656096 | Msa0708170:CDS | 30.0% | |
| ! | ATGTTCGAGTTAAGGACAAA+TGG | - | chr4_4:81653541-81653560 | Msa0708170:CDS | 35.0% |
| !! | AAATGGACTGTTGTTAAGGA+TGG | - | chr4_4:81653558-81653577 | Msa0708170:CDS | 35.0% |
| ! | GTTGATCATAGTTGATGCTA+AGG | - | chr4_4:81653596-81653615 | Msa0708170:CDS | 35.0% |
| TGTTATTCCAACTGGTTACA+AGG | - | chr4_4:81653724-81653743 | Msa0708170:CDS | 35.0% | |
| ! | TGTATGTGGTGTTTTCTAGA+AGG | + | chr4_4:81653766-81653785 | None:intergenic | 35.0% |
| TGAACTTAATGCTAGGGTTA+GGG | + | chr4_4:81653904-81653923 | None:intergenic | 35.0% | |
| TTGAACTTAATGCTAGGGTT+AGG | + | chr4_4:81653905-81653924 | None:intergenic | 35.0% | |
| ATGGCTTGAACTTAATGCTA+GGG | + | chr4_4:81653910-81653929 | None:intergenic | 35.0% | |
| AATGGCTTGAACTTAATGCT+AGG | + | chr4_4:81653911-81653930 | None:intergenic | 35.0% | |
| !! | ACTTTGGTTTGAAAGACTTG+AGG | - | chr4_4:81654142-81654161 | Msa0708170:CDS | 35.0% |
| TTTCTGTAAACTGCACTTTG+TGG | - | chr4_4:81654250-81654269 | Msa0708170:intron | 35.0% | |
| TTCTGTAAACTGCACTTTGT+GGG | - | chr4_4:81654251-81654270 | Msa0708170:intron | 35.0% | |
| TACTGCAAGATCAAAGAAGA+AGG | - | chr4_4:81654348-81654367 | Msa0708170:CDS | 35.0% | |
| AAAGACATAGAAGTTAGGAC+TGG | + | chr4_4:81654613-81654632 | None:intergenic | 35.0% | |
| GAATCTGGGAATTAGATAGA+AGG | + | chr4_4:81654737-81654756 | None:intergenic | 35.0% | |
| ! | ATAGTGAATCTGAGAGTATG+TGG | + | chr4_4:81654817-81654836 | None:intergenic | 35.0% |
| AACCATCTCACATATCAAAC+TGG | - | chr4_4:81654844-81654863 | Msa0708170:CDS | 35.0% | |
| ATCCAGTTTGATATGTGAGA+TGG | + | chr4_4:81654849-81654868 | None:intergenic | 35.0% | |
| AAAGTGAACTCGACCAAAAA+TGG | - | chr4_4:81654914-81654933 | Msa0708170:CDS | 35.0% | |
| AAGTGTCCAAAGATTGCTAA+AGG | - | chr4_4:81654959-81654978 | Msa0708170:intron | 35.0% | |
| AGTGTCCAAAGATTGCTAAA+GGG | - | chr4_4:81654960-81654979 | Msa0708170:intron | 35.0% | |
| CCCTATATGCGTATTAAGTA+TGG | - | chr4_4:81655056-81655075 | Msa0708170:CDS | 35.0% | |
| !! | TTTTAGGTACAAGCTTGAGA+TGG | - | chr4_4:81655127-81655146 | Msa0708170:intron | 35.0% |
| AAACCTGTATCATGTTACTG+CGG | + | chr4_4:81655238-81655257 | None:intergenic | 35.0% | |
| GACAGTTGAAACATTAGTGT+AGG | + | chr4_4:81655317-81655336 | None:intergenic | 35.0% | |
| CTTTGAATTTCCTCCCATAA+TGG | - | chr4_4:81655361-81655380 | Msa0708170:intron | 35.0% | |
| ! | TGACTTGGCTGAAAAAACTA+TGG | - | chr4_4:81655385-81655404 | Msa0708170:intron | 35.0% |
| !! | CTATGGTCTTTAAGGTCAAA+TGG | - | chr4_4:81655402-81655421 | Msa0708170:intron | 35.0% |
| ATAATCATACCACAAGGTTG+GGG | + | chr4_4:81655505-81655524 | None:intergenic | 35.0% | |
| TTTGTCCATCATATTTCAGG+AGG | - | chr4_4:81655610-81655629 | Msa0708170:intron | 35.0% | |
| GGTAACATCTTCATTAGAAG+CGG | + | chr4_4:81655699-81655718 | None:intergenic | 35.0% | |
| TGAGGAGTAATTTCAACAGT+AGG | + | chr4_4:81655997-81656016 | None:intergenic | 35.0% | |
| ! | ACTGATGATTTTTGCAATGC+TGG | - | chr4_4:81656030-81656049 | Msa0708170:CDS | 35.0% |
| ! | TTTGATGAAGTCTGTTTTGC+AGG | + | chr4_4:81656075-81656094 | None:intergenic | 35.0% |
| CAAAACAGACTTCATCAAAG+AGG | - | chr4_4:81656076-81656095 | Msa0708170:CDS | 35.0% | |
| !! | GGACAAATGGACTGTTGTTA+AGG | - | chr4_4:81653554-81653573 | Msa0708170:CDS | 40.0% |
| ! | TCATAGTTGATGCTAAGGTG+AGG | - | chr4_4:81653601-81653620 | Msa0708170:CDS | 40.0% |
| !!! | GCCATTTTCTGAGATTGTGT+CGG | - | chr4_4:81653925-81653944 | Msa0708170:CDS | 40.0% |
| !!! | CCATTTTCTGAGATTGTGTC+GGG | - | chr4_4:81653926-81653945 | Msa0708170:CDS | 40.0% |
| AACAAGGATAGGAAAGAAGG+TGG | - | chr4_4:81654303-81654322 | Msa0708170:intron | 40.0% | |
| TCCCTGAGATCAATCTCTTT+CGG | - | chr4_4:81654529-81654548 | Msa0708170:intron | 40.0% | |
| AGATCAATCTCTTTCGGGAA+AGG | - | chr4_4:81654535-81654554 | Msa0708170:intron | 40.0% | |
| ATCCAGTGTACACAGTCTTA+TGG | - | chr4_4:81654684-81654703 | Msa0708170:CDS | 40.0% | |
| TTCCATAAGACTGTGTACAC+TGG | + | chr4_4:81654689-81654708 | None:intergenic | 40.0% | |
| AAATTCATACCACGTCAAGC+TGG | + | chr4_4:81654779-81654798 | None:intergenic | 40.0% | |
| TGAACTCGACCAAAAATGGT+TGG | - | chr4_4:81654918-81654937 | Msa0708170:CDS | 40.0% | |
| GTGTCCAAAGATTGCTAAAG+GGG | - | chr4_4:81654961-81654980 | Msa0708170:intron | 40.0% | |
| TTGTCCCCTTTAGCAATCTT+TGG | + | chr4_4:81654968-81654987 | None:intergenic | 40.0% | |
| GATGGATGTTTCCTATGACA+TGG | - | chr4_4:81655145-81655164 | Msa0708170:intron | 40.0% | |
| AACAGTTCTGTCCATGTCAT+AGG | + | chr4_4:81655159-81655178 | None:intergenic | 40.0% | |
| !!! | ACAGAACTGTTTTTGTCGTC+TGG | - | chr4_4:81655168-81655187 | Msa0708170:intron | 40.0% |
| !!! | CAGAACTGTTTTTGTCGTCT+GGG | - | chr4_4:81655169-81655188 | Msa0708170:intron | 40.0% |
| TATCATGTTACTGCGGAGTT+GGG | + | chr4_4:81655231-81655250 | None:intergenic | 40.0% | |
| TTTCAACTGTCTTATCAGGC+TGG | - | chr4_4:81655326-81655345 | Msa0708170:CDS | 40.0% | |
| TCAGCCAAGTCATCCATTAT+GGG | + | chr4_4:81655377-81655396 | None:intergenic | 40.0% | |
| TTCAGCCAAGTCATCCATTA+TGG | + | chr4_4:81655378-81655397 | None:intergenic | 40.0% | |
| TTAAGGTCAAATGGCAACCA+AGG | - | chr4_4:81655411-81655430 | Msa0708170:intron | 40.0% | |
| TTCAGCCTCCTGAAATATGA+TGG | + | chr4_4:81655618-81655637 | None:intergenic | 40.0% | |
| ACAGCTAGATTCTCAATCTC+TGG | + | chr4_4:81655641-81655660 | None:intergenic | 40.0% | |
| TCTAGCTGTTGATGTGATGA+TGG | - | chr4_4:81655652-81655671 | Msa0708170:CDS | 40.0% | |
| TCATTAGAAGCGGTTGGATT+AGG | + | chr4_4:81655689-81655708 | None:intergenic | 40.0% | |
| ACATCTTCATTAGAAGCGGT+TGG | + | chr4_4:81655695-81655714 | None:intergenic | 40.0% | |
| CATATTCAGAAGATGCAGAG+AGG | + | chr4_4:81655843-81655862 | None:intergenic | 40.0% | |
| TCTTCTGAATATGACCCTGA+TGG | - | chr4_4:81655850-81655869 | Msa0708170:CDS | 40.0% | |
| TAATCTGGGTCAAACCATCA+GGG | + | chr4_4:81655867-81655886 | None:intergenic | 40.0% | |
| GCATTCTTTAAGCCACTGAT+TGG | + | chr4_4:81655892-81655911 | None:intergenic | 40.0% | |
| ATCAGTGGCTTAAAGAATGC+TGG | - | chr4_4:81655892-81655911 | Msa0708170:intron | 40.0% | |
| GCAACAGAATTGAAAGAACC+TGG | + | chr4_4:81655955-81655974 | None:intergenic | 40.0% | |
| ! | GATGATTTTTGCAATGCTGG+TGG | - | chr4_4:81656033-81656052 | Msa0708170:CDS | 40.0% |
| TTGCAGGTGTGATCTCATTA+TGG | + | chr4_4:81656059-81656078 | None:intergenic | 40.0% | |
| ! | AACTCGACGGGTCTTACTTT+TGG | + | chr4_4:81653480-81653499 | None:intergenic | 45.0% |
| ATTGCAGCAATGAACTCGAC+GGG | + | chr4_4:81653492-81653511 | None:intergenic | 45.0% | |
| GATTGCAGCAATGAACTCGA+CGG | + | chr4_4:81653493-81653512 | None:intergenic | 45.0% | |
| GACTGTTGTTAAGGATGGCA+AGG | - | chr4_4:81653563-81653582 | Msa0708170:CDS | 45.0% | |
| !! | TAAGGATGGCAAGGAGCATT+TGG | - | chr4_4:81653572-81653591 | Msa0708170:CDS | 45.0% |
| ! | CAAACAGCCTTGTAACCAGT+TGG | + | chr4_4:81653734-81653753 | None:intergenic | 45.0% |
| CCCGACACAATCTCAGAAAA+TGG | + | chr4_4:81653929-81653948 | None:intergenic | 45.0% | |
| CTGAGATTGTGTCGGGAAAA+TGG | - | chr4_4:81653933-81653952 | Msa0708170:CDS | 45.0% | |
| GCTACTGTCAGCTGAATGAA+GGG | - | chr4_4:81654097-81654116 | Msa0708170:CDS | 45.0% | |
| TGTCAGCTGAATGAAGGGAA+TGG | - | chr4_4:81654102-81654121 | Msa0708170:CDS | 45.0% | |
| GTCAGCTGAATGAAGGGAAT+GGG | - | chr4_4:81654103-81654122 | Msa0708170:CDS | 45.0% | |
| TGTAAACTGCACTTTGTGGG+AGG | - | chr4_4:81654254-81654273 | Msa0708170:intron | 45.0% | |
| CTCAGGGATGTTCTCATTGA+TGG | + | chr4_4:81654517-81654536 | None:intergenic | 45.0% | |
| CCCGAAAGAGATTGATCTCA+GGG | + | chr4_4:81654533-81654552 | None:intergenic | 45.0% | |
| CCCTGAGATCAATCTCTTTC+GGG | - | chr4_4:81654530-81654549 | Msa0708170:intron | 45.0% | |
| TCCCGAAAGAGATTGATCTC+AGG | + | chr4_4:81654534-81654553 | None:intergenic | 45.0% | |
| GACATCAGCTGCTCATCTTT+AGG | + | chr4_4:81654654-81654673 | None:intergenic | 45.0% | |
| AAGACTGTGTACACTGGATC+TGG | + | chr4_4:81654683-81654702 | None:intergenic | 45.0% | |
| GTCCTCTTCAGTAGCAACTT+GGG | + | chr4_4:81654715-81654734 | None:intergenic | 45.0% | |
| AAGCTGGATAACCTGAGACA+GGG | + | chr4_4:81654763-81654782 | None:intergenic | 45.0% | |
| ! | ATCTGAGAGTATGTGGTGAG+TGG | + | chr4_4:81654810-81654829 | None:intergenic | 45.0% |
| CTCCTTACACATGTGACGAT+GGG | - | chr4_4:81654990-81655009 | Msa0708170:intron | 45.0% | |
| ATACTGAGACCGAGATTGTC+AGG | - | chr4_4:81655017-81655036 | Msa0708170:intron | 45.0% | |
| GTATCATGTTACTGCGGAGT+TGG | + | chr4_4:81655232-81655251 | None:intergenic | 45.0% | |
| ACTCCGCAGTAACATGATAC+AGG | - | chr4_4:81655232-81655251 | Msa0708170:CDS | 45.0% | |
| GGGAGGAAATTCAAAGCGAT+TGG | + | chr4_4:81655357-81655376 | None:intergenic | 45.0% | |
| !! | TCCTCCCATAATGGATGACT+TGG | - | chr4_4:81655370-81655389 | Msa0708170:intron | 45.0% |
| ACAGAGCAAGATTTCCACCT+TGG | + | chr4_4:81655431-81655450 | None:intergenic | 45.0% | |
| AAGCTTTCATTGACCGAGTC+AGG | - | chr4_4:81655471-81655490 | Msa0708170:CDS | 45.0% | |
| AGCTTTCATTGACCGAGTCA+GGG | - | chr4_4:81655472-81655491 | Msa0708170:CDS | 45.0% | |
| ! | TGTCACAAACCTTGGTAGTC+TGG | - | chr4_4:81655529-81655548 | Msa0708170:intron | 45.0% |
| AAGATTCAGCCAGACTACCA+AGG | + | chr4_4:81655541-81655560 | None:intergenic | 45.0% | |
| GTAATCTGGGTCAAACCATC+AGG | + | chr4_4:81655868-81655887 | None:intergenic | 45.0% | |
| ACCCAGATTACACCAATCAG+TGG | - | chr4_4:81655877-81655896 | Msa0708170:intron | 45.0% | |
| ! | GCCACTGATTGGTGTAATCT+GGG | + | chr4_4:81655881-81655900 | None:intergenic | 45.0% |
| ! | AGCCACTGATTGGTGTAATC+TGG | + | chr4_4:81655882-81655901 | None:intergenic | 45.0% |
| GAAAGACTCTCGCAACTCAT+GGG | + | chr4_4:81655922-81655941 | None:intergenic | 45.0% | |
| AGAAAGACTCTCGCAACTCA+TGG | + | chr4_4:81655923-81655942 | None:intergenic | 45.0% | |
| AGTCTTTCTCAACTCACACC+AGG | - | chr4_4:81655934-81655953 | Msa0708170:intron | 45.0% | |
| TCAGTTGCAGCCATCTTATG+AGG | + | chr4_4:81656015-81656034 | None:intergenic | 45.0% | |
| CGCTACTGTCAGCTGAATGA+AGG | - | chr4_4:81654096-81654115 | Msa0708170:CDS | 50.0% | |
| CACCCAAGTTGCTACTGAAG+AGG | - | chr4_4:81654710-81654729 | Msa0708170:intron | 50.0% | |
| GGTCCTCTTCAGTAGCAACT+TGG | + | chr4_4:81654716-81654735 | None:intergenic | 50.0% | |
| AGCTGGATAACCTGAGACAG+GGG | + | chr4_4:81654762-81654781 | None:intergenic | 50.0% | |
| CAAGCTGGATAACCTGAGAC+AGG | + | chr4_4:81654764-81654783 | None:intergenic | 50.0% | |
| TCAGGTTATCCAGCTTGACG+TGG | - | chr4_4:81654767-81654786 | Msa0708170:intron | 50.0% | |
| CCATCGTCACATGTGTAAGG+AGG | + | chr4_4:81654992-81655011 | None:intergenic | 50.0% | |
| CCTCCTTACACATGTGACGA+TGG | - | chr4_4:81654989-81655008 | Msa0708170:intron | 50.0% | |
| TGCCCATCGTCACATGTGTA+AGG | + | chr4_4:81654995-81655014 | None:intergenic | 50.0% | |
| CTAACATCTGAGTCACCTCG+CGG | + | chr4_4:81655196-81655215 | None:intergenic | 50.0% | |
| GCGAGGTGACTCAGATGTTA+GGG | - | chr4_4:81655195-81655214 | Msa0708170:intron | 50.0% | |
| GCCAAGTCATCCATTATGGG+AGG | + | chr4_4:81655374-81655393 | None:intergenic | 50.0% | |
| AGGTCAAATGGCAACCAAGG+TGG | - | chr4_4:81655414-81655433 | Msa0708170:intron | 50.0% | |
| TGCTAGGGTTAGGGATGTCG+TGG | + | chr4_4:81653895-81653914 | None:intergenic | 55.0% | |
| CTGAGACAGGGGCAGAATCT+GGG | + | chr4_4:81654751-81654770 | None:intergenic | 55.0% | |
| CGCGAGGTGACTCAGATGTT+AGG | - | chr4_4:81655194-81655213 | Msa0708170:intron | 55.0% | |
| TGGGGAACTTAGCCCTGACT+CGG | + | chr4_4:81655487-81655506 | None:intergenic | 55.0% | |
| GGCTAAGTTCCCCAACCTTG+TGG | - | chr4_4:81655493-81655512 | Msa0708170:CDS | 55.0% | |
| CCTGAGACAGGGGCAGAATC+TGG | + | chr4_4:81654752-81654771 | None:intergenic | 60.0% | |
| CCAGATTCTGCCCCTGTCTC+AGG | - | chr4_4:81654749-81654768 | Msa0708170:intron | 60.0% | |
| !! | TTTTGTCGTCTGGGACCGCG+AGG | - | chr4_4:81655178-81655197 | Msa0708170:intron | 60.0% |
| GTTACTGCGGAGTTGGGCAG+CGG | + | chr4_4:81655225-81655244 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 81653462 | 81656128 | 81653462 | ID=Msa0708170;Name=Msa0708170 |
| chr4_4 | mRNA | 81653462 | 81656128 | 81653462 | ID=Msa0708170-mRNA-1;Parent=Msa0708170;Name=Msa0708170-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.6|0.27|1|1|1|11|0|572 |
| chr4_4 | exon | 81655973 | 81656128 | 81655973 | ID=Msa0708170-mRNA-1:exon:26799;Parent=Msa0708170-mRNA-1 |
| chr4_4 | exon | 81655616 | 81655883 | 81655616 | ID=Msa0708170-mRNA-1:exon:26798;Parent=Msa0708170-mRNA-1 |
| chr4_4 | exon | 81655427 | 81655520 | 81655427 | ID=Msa0708170-mRNA-1:exon:26797;Parent=Msa0708170-mRNA-1 |
| chr4_4 | exon | 81655221 | 81655345 | 81655221 | ID=Msa0708170-mRNA-1:exon:26796;Parent=Msa0708170-mRNA-1 |
| chr4_4 | exon | 81655034 | 81655124 | 81655034 | ID=Msa0708170-mRNA-1:exon:26795;Parent=Msa0708170-mRNA-1 |
| chr4_4 | exon | 81654802 | 81654943 | 81654802 | ID=Msa0708170-mRNA-1:exon:26794;Parent=Msa0708170-mRNA-1 |
| chr4_4 | exon | 81654552 | 81654709 | 81654552 | ID=Msa0708170-mRNA-1:exon:26793;Parent=Msa0708170-mRNA-1 |
| chr4_4 | exon | 81654337 | 81654457 | 81654337 | ID=Msa0708170-mRNA-1:exon:26792;Parent=Msa0708170-mRNA-1 |
| chr4_4 | exon | 81654076 | 81654246 | 81654076 | ID=Msa0708170-mRNA-1:exon:26791;Parent=Msa0708170-mRNA-1 |
| chr4_4 | exon | 81653863 | 81653961 | 81653863 | ID=Msa0708170-mRNA-1:exon:26790;Parent=Msa0708170-mRNA-1 |
| chr4_4 | exon | 81653462 | 81653755 | 81653462 | ID=Msa0708170-mRNA-1:exon:26789;Parent=Msa0708170-mRNA-1 |
| chr4_4 | CDS | 81655973 | 81656128 | 81655973 | ID=Msa0708170-mRNA-1:cds;Parent=Msa0708170-mRNA-1 |
| chr4_4 | CDS | 81655616 | 81655883 | 81655616 | ID=Msa0708170-mRNA-1:cds;Parent=Msa0708170-mRNA-1 |
| chr4_4 | CDS | 81655427 | 81655520 | 81655427 | ID=Msa0708170-mRNA-1:cds;Parent=Msa0708170-mRNA-1 |
| chr4_4 | CDS | 81655221 | 81655345 | 81655221 | ID=Msa0708170-mRNA-1:cds;Parent=Msa0708170-mRNA-1 |
| chr4_4 | CDS | 81655034 | 81655124 | 81655034 | ID=Msa0708170-mRNA-1:cds;Parent=Msa0708170-mRNA-1 |
| chr4_4 | CDS | 81654802 | 81654943 | 81654802 | ID=Msa0708170-mRNA-1:cds;Parent=Msa0708170-mRNA-1 |
| chr4_4 | CDS | 81654552 | 81654709 | 81654552 | ID=Msa0708170-mRNA-1:cds;Parent=Msa0708170-mRNA-1 |
| chr4_4 | CDS | 81654337 | 81654457 | 81654337 | ID=Msa0708170-mRNA-1:cds;Parent=Msa0708170-mRNA-1 |
| chr4_4 | CDS | 81654076 | 81654246 | 81654076 | ID=Msa0708170-mRNA-1:cds;Parent=Msa0708170-mRNA-1 |
| chr4_4 | CDS | 81653863 | 81653961 | 81653863 | ID=Msa0708170-mRNA-1:cds;Parent=Msa0708170-mRNA-1 |
| chr4_4 | CDS | 81653462 | 81653755 | 81653462 | ID=Msa0708170-mRNA-1:cds;Parent=Msa0708170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
