AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0713740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0713740 MtrunA17_Chr5g0400821 92.767 318 9 3 1 313 1 309 0.0 580
Msa0713740 MtrunA17_Chr4g0054391 54.232 319 107 12 1 310 1 289 7.27e-93 277
Msa0713740 MtrunA17_Chr1g0152011 78.107 169 32 2 1 166 1 167 6.79e-91 274
Msa0713740 MtrunA17_Chr3g0135311 69.942 173 50 1 1 173 1 171 2.46e-85 260
Msa0713740 MtrunA17_Chr4g0072751 95.495 111 5 0 1 111 1 111 6.41e-76 236
Msa0713740 MtrunA17_Chr4g0028311 85.124 121 18 0 1 121 1 121 4.28e-75 233
Msa0713740 MtrunA17_Chr7g0264641 69.718 142 43 0 1 142 1 142 1.39e-72 225
Msa0713740 MtrunA17_Chr2g0327351 88.288 111 13 0 1 111 1 111 1.47e-71 224
Msa0713740 MtrunA17_Chr1g0151941 77.966 118 26 0 1 118 1 118 1.11e-67 212
Msa0713740 MtrunA17_Chr6g0487491 70.079 127 30 1 1 119 1 127 2.63e-62 198
Msa0713740 MtrunA17_Chr6g0452271 64.407 118 41 1 1 118 1 117 2.72e-54 180
Msa0713740 MtrunA17_Chr3g0103281 66.387 119 39 1 1 119 1 118 1.34e-53 178
Msa0713740 MtrunA17_Chr3g0115821 63.559 118 42 1 1 118 1 117 5.20e-52 174
Msa0713740 MtrunA17_Chr6g0453471 64.103 117 41 1 1 117 1 116 5.28e-51 172
Msa0713740 MtrunA17_Chr4g0039971 62.712 118 43 1 1 118 2 118 1.17e-50 171
Msa0713740 MtrunA17_Chr1g0167691 53.548 155 67 4 1 154 1 151 1.58e-50 168
Msa0713740 MtrunA17_Chr7g0217741 64.103 117 41 1 1 117 1 116 2.13e-50 169
Msa0713740 MtrunA17_Chr1g0187761 55.944 143 55 2 1 143 1 135 3.01e-50 167
Msa0713740 MtrunA17_Chr4g0042671 65.812 117 39 1 1 117 1 116 3.90e-50 171
Msa0713740 MtrunA17_Chr7g0217221 63.636 121 43 1 1 121 1 120 6.93e-50 167
Msa0713740 MtrunA17_Chr1g0167661 44.907 216 105 7 1 215 1 203 7.84e-50 166
Msa0713740 MtrunA17_Chr8g0346561 60.000 125 46 2 1 125 1 121 1.01e-49 167
Msa0713740 MtrunA17_Chr4g0037141 59.167 120 48 1 1 120 1 119 1.10e-49 166
Msa0713740 MtrunA17_Chr5g0410961 62.712 118 43 1 1 118 1 117 1.81e-49 167
Msa0713740 MtrunA17_Chr1g0203411 46.857 175 83 4 1 166 1 174 2.22e-49 166
Msa0713740 MtrunA17_Chr7g0275911 58.065 124 51 1 1 124 1 123 3.68e-49 164
Msa0713740 MtrunA17_Chr4g0048511 62.185 119 43 2 1 118 1 118 7.49e-49 166
Msa0713740 MtrunA17_Chr2g0323411 62.712 118 43 1 1 118 1 117 8.82e-49 165
Msa0713740 MtrunA17_Chr2g0281071 62.185 119 43 2 1 118 1 118 9.32e-49 166
Msa0713740 MtrunA17_Chr3g0131121 58.333 120 49 1 1 120 1 119 1.13e-48 164
Msa0713740 MtrunA17_Chr7g0261281 53.285 137 63 1 1 137 1 136 1.72e-48 163
Msa0713740 MtrunA17_Chr4g0060721 46.286 175 90 3 1 173 2 174 2.39e-48 164
Msa0713740 MtrunA17_Chr8g0385321 59.167 120 48 1 1 120 1 119 8.98e-48 162
Msa0713740 MtrunA17_Chr8g0349261 59.664 119 47 1 1 118 1 119 9.22e-48 162
Msa0713740 MtrunA17_Chr7g0274581 59.829 117 46 1 1 117 1 116 1.05e-47 159
Msa0713740 MtrunA17_Chr3g0092401 47.436 156 81 1 1 156 2 156 1.64e-47 162
Msa0713740 MtrunA17_Chr4g0058631 61.017 118 45 1 1 118 1 117 3.05e-47 162
Msa0713740 MtrunA17_Chr7g0228891 44.262 183 89 4 1 171 1 182 3.07e-47 160
Msa0713740 MtrunA17_Chr7g0254411 60.684 117 45 1 1 117 1 116 2.23e-46 159
Msa0713740 MtrunA17_Chr2g0323351 53.030 132 61 1 1 132 1 131 2.33e-46 157
Msa0713740 MtrunA17_Chr4g0057031 59.322 118 47 1 1 118 1 117 2.60e-46 157
Msa0713740 MtrunA17_Chr5g0435101 56.897 116 49 1 3 118 2 116 3.49e-46 155
Msa0713740 MtrunA17_Chr1g0193371 45.652 184 95 4 1 182 1 181 3.60e-46 160
Msa0713740 MtrunA17_Chr7g0270891 42.466 219 105 5 1 200 1 217 9.79e-46 159
Msa0713740 MtrunA17_Chr3g0117091 59.322 118 47 1 1 118 1 117 1.37e-45 157
Msa0713740 MtrunA17_Chr5g0395281 58.475 118 48 1 1 118 1 117 1.48e-45 156
Msa0713740 MtrunA17_Chr4g0070611 56.098 123 53 1 1 123 1 122 1.62e-45 156
Msa0713740 MtrunA17_Chr4g0070641 58.120 117 48 1 1 117 1 116 2.11e-45 152
Msa0713740 MtrunA17_Chr1g0193801 59.167 120 48 1 1 120 1 119 2.46e-45 158
Msa0713740 MtrunA17_Chr6g0453211 63.063 111 40 1 1 111 1 110 3.93e-45 155
Msa0713740 MtrunA17_Chr3g0110351 59.829 117 46 1 1 117 1 116 3.96e-45 155
Msa0713740 MtrunA17_Chr4g0022901 52.143 140 64 3 1 138 1 139 4.64e-45 154
Msa0713740 MtrunA17_Chr5g0434571 40.826 218 111 4 1 204 37 250 5.93e-45 156
Msa0713740 MtrunA17_Chr4g0068061 56.410 117 50 1 1 117 1 116 6.04e-45 155
Msa0713740 MtrunA17_Chr4g0022931 56.557 122 51 2 1 121 1 121 7.26e-45 154
Msa0713740 MtrunA17_Chr2g0311221 59.459 111 44 1 2 112 4 113 8.72e-45 155
Msa0713740 MtrunA17_Chr4g0022891 49.640 139 69 1 1 139 1 138 1.36e-44 152
Msa0713740 MtrunA17_Chr3g0121241 56.034 116 50 1 5 120 35 149 1.41e-44 154
Msa0713740 MtrunA17_Chr8g0387421 57.265 117 49 1 1 117 1 116 2.59e-44 154
Msa0713740 MtrunA17_Chr1g0211161 57.759 116 48 1 3 118 4 118 4.84e-44 150
Msa0713740 MtrunA17_Chr2g0330041 55.833 120 52 1 1 120 1 119 1.88e-43 153
Msa0713740 MtrunA17_Chr8g0342541 55.932 118 51 1 1 118 1 117 9.79e-43 150
Msa0713740 MtrunA17_Chr1g0194951 55.556 117 51 1 1 117 1 116 1.08e-42 150
Msa0713740 MtrunA17_Chr7g0271241 60.909 110 42 1 1 110 1 109 1.35e-42 150
Msa0713740 MtrunA17_Chr5g0397231 58.559 111 45 1 1 111 1 110 1.47e-42 149
Msa0713740 MtrunA17_Chr8g0342521 55.000 120 53 1 1 120 1 119 3.65e-42 149
Msa0713740 MtrunA17_Chr4g0022911 46.309 149 68 3 1 138 1 148 4.29e-42 147
Msa0713740 MtrunA17_Chr8g0342481 53.782 119 55 0 1 119 1 119 7.00e-42 149
Msa0713740 MtrunA17_Chr2g0309911 53.913 115 52 1 6 120 5 118 6.39e-41 144
Msa0713740 MtrunA17_Chr4g0022881 54.783 115 51 1 1 115 1 114 2.73e-40 140
Msa0713740 MtrunA17_Chr4g0044421 52.941 119 54 2 3 120 2 119 4.53e-40 139
Msa0713740 MtrunA17_Chr7g0269831 58.120 117 48 1 1 117 1 116 5.23e-40 143
Msa0713740 MtrunA17_Chr1g0203441 51.145 131 62 2 1 130 1 130 1.73e-39 139
Msa0713740 MtrunA17_Chr5g0417821 57.009 107 45 1 12 118 7 112 4.37e-39 139
Msa0713740 MtrunA17_Chr2g0328771 56.604 106 45 1 12 117 20 124 8.78e-39 139
Msa0713740 MtrunA17_Chr8g0354661 57.143 105 44 1 12 116 37 140 1.56e-38 142
Msa0713740 MtrunA17_Chr6g0470971 51.969 127 60 1 4 130 6 131 1.64e-38 137
Msa0713740 MtrunA17_Chr3g0099131 57.009 107 45 1 10 116 39 144 2.10e-38 142
Msa0713740 MtrunA17_Chr5g0434931 55.963 109 47 1 12 120 35 142 4.80e-38 136
Msa0713740 MtrunA17_Chr3g0088461 55.455 110 48 1 8 117 18 126 8.50e-38 137
Msa0713740 MtrunA17_Chr4g0055981 52.459 122 57 1 9 130 52 172 8.65e-38 134
Msa0713740 MtrunA17_Chr7g0220341 52.419 124 56 2 12 133 25 147 9.05e-38 135
Msa0713740 MtrunA17_Chr4g0032401 56.604 106 45 1 12 117 17 121 1.19e-37 136
Msa0713740 MtrunA17_Chr5g0434911 53.509 114 52 1 7 120 16 128 3.54e-37 134
Msa0713740 MtrunA17_Chr8g0343831 56.410 117 46 2 1 117 1 112 3.92e-37 133
Msa0713740 MtrunA17_Chr3g0080861 56.190 105 45 1 12 116 37 140 4.95e-37 138
Msa0713740 MtrunA17_Chr7g0228231 52.893 121 54 2 11 131 13 130 7.32e-37 131
Msa0713740 MtrunA17_Chr6g0450101 41.053 190 95 5 1 184 1 179 1.65e-36 130
Msa0713740 MtrunA17_Chr7g0240821 54.867 113 50 1 17 129 6 117 2.45e-36 130
Msa0713740 MtrunA17_Chr7g0228991 55.046 109 48 1 12 120 29 136 6.97e-36 130
Msa0713740 MtrunA17_Chr1g0194301 54.128 109 49 1 8 116 29 136 7.56e-35 127
Msa0713740 MtrunA17_Chr5g0440781 53.271 107 48 2 10 115 10 115 1.49e-34 124
Msa0713740 MtrunA17_Chr1g0180391 37.255 204 118 6 10 211 17 212 2.00e-34 125
Msa0713740 MtrunA17_Chr1g0209661 54.286 105 47 1 12 116 27 130 2.41e-34 127
Msa0713740 MtrunA17_Chr2g0322521 55.556 108 47 1 9 116 26 132 2.44e-34 129
Msa0713740 MtrunA17_Chr4g0042611 59.551 89 35 1 1 89 1 88 3.98e-34 120
Msa0713740 MtrunA17_Chr8g0360111 57.843 102 42 1 12 113 25 125 4.07e-34 125
Msa0713740 MtrunA17_Chr5g0434831 53.271 107 49 1 12 118 7 112 4.55e-34 123
Msa0713740 MtrunA17_Chr5g0434841 52.294 109 51 1 12 120 20 127 7.84e-34 126
Msa0713740 MtrunA17_Chr1g0168661 54.808 104 46 1 13 116 22 124 9.04e-34 124
Msa0713740 MtrunA17_Chr1g0186061 53.846 104 47 1 13 116 21 123 9.50e-34 124
Msa0713740 MtrunA17_Chr5g0440761 53.271 107 48 2 10 115 10 115 1.05e-33 124
Msa0713740 MtrunA17_Chr5g0441141 53.271 107 48 2 10 115 10 115 1.16e-33 124
Msa0713740 MtrunA17_Chr1g0192411 51.376 109 52 1 8 116 8 115 1.49e-33 127
Msa0713740 MtrunA17_Chr1g0194291 52.294 109 51 1 8 116 17 124 6.55e-33 122
Msa0713740 MtrunA17_Chr1g0154031 50.476 105 51 1 12 116 76 179 1.25e-31 122
Msa0713740 MtrunA17_Chr4g0068921 52.586 116 52 2 8 123 20 132 1.35e-31 117
Msa0713740 MtrunA17_Chr5g0441131 51.402 107 50 2 10 115 7 112 2.25e-31 116
Msa0713740 MtrunA17_Chr2g0294811 54.839 93 41 1 1 93 1 92 5.39e-31 113
Msa0713740 MtrunA17_Chr2g0327821 43.704 135 71 2 12 144 6 137 1.87e-30 115
Msa0713740 MtrunA17_Chr7g0247131 54.639 97 42 1 46 140 11 107 1.90e-30 115
Msa0713740 MtrunA17_Chr2g0293911 51.724 116 53 2 8 123 20 132 4.10e-30 116
Msa0713740 MtrunA17_Chr3g0099141 54.545 88 39 1 8 95 36 122 6.14e-29 108
Msa0713740 MtrunA17_Chr5g0401731 45.082 122 65 2 14 135 15 134 1.05e-28 112
Msa0713740 MtrunA17_Chr8g0334881 47.706 109 55 2 8 115 6 113 3.52e-28 111
Msa0713740 MtrunA17_Chr4g0053431 36.559 186 106 5 14 193 5 184 5.74e-28 109
Msa0713740 MtrunA17_Chr4g0008551 50.000 106 51 2 14 119 38 141 1.57e-27 110
Msa0713740 MtrunA17_Chr8g0342461 52.222 90 43 0 1 90 1 90 2.12e-27 104
Msa0713740 MtrunA17_Chr8g0342471 52.222 90 43 0 1 90 1 90 2.67e-27 103
Msa0713740 MtrunA17_Chr3g0133601 47.706 109 55 2 8 116 31 137 2.86e-27 106
Msa0713740 MtrunA17_Chr8g0342511 53.409 88 40 1 1 88 1 87 3.33e-27 102
Msa0713740 MtrunA17_Chr4g0030881 46.018 113 49 3 13 116 8 117 3.84e-27 107
Msa0713740 MtrunA17_Chr8g0342531 52.222 90 42 1 1 90 1 89 6.64e-27 103
Msa0713740 MtrunA17_Chr6g0454921 48.544 103 51 2 14 116 15 115 7.35e-27 104
Msa0713740 MtrunA17_Chr4g0013361 46.789 109 56 2 8 115 6 113 1.45e-26 106
Msa0713740 MtrunA17_Chr5g0434901 64.286 70 25 0 45 114 5 74 1.64e-26 101
Msa0713740 MtrunA17_Chr2g0323321 48.387 93 46 2 1 93 1 91 3.47e-26 100
Msa0713740 MtrunA17_Chr5g0395221 51.685 89 42 1 1 89 1 88 7.43e-26 98.6
Msa0713740 MtrunA17_Chr3g0093811 56.627 83 33 1 38 117 4 86 5.37e-25 101
Msa0713740 MtrunA17_Chr7g0229131 42.857 105 58 1 46 148 5 109 5.05e-24 96.3
Msa0713740 MtrunA17_Chr7g0229101 60.870 69 27 0 46 114 5 73 5.26e-24 97.4
Msa0713740 MtrunA17_Chr4g0042501 34.177 158 88 5 14 165 105 252 8.55e-24 100
Msa0713740 MtrunA17_Chr5g0429661 44.660 103 55 2 14 116 122 222 2.77e-23 98.2
Msa0713740 MtrunA17_Chr6g0480581 40.179 112 60 3 14 125 4 108 5.32e-23 95.5
Msa0713740 MtrunA17_Chr5g0417621 34.857 175 95 7 14 184 134 293 1.08e-22 97.8
Msa0713740 MtrunA17_Chr6g0460661 41.379 116 62 4 14 125 16 129 1.58e-22 92.0
Msa0713740 MtrunA17_Chr5g0437321 46.000 100 52 2 14 113 19 116 8.63e-22 93.2
Msa0713740 MtrunA17_Chr4g0058991 42.593 108 60 2 9 116 204 309 2.10e-21 94.0
Msa0713740 MtrunA17_Chr5g0425591 49.425 87 42 2 11 96 8 93 5.61e-21 85.9
Msa0713740 MtrunA17_Chr6g0460671 38.525 122 69 3 14 135 99 214 1.11e-20 90.9
Msa0713740 MtrunA17_Chr3g0117511 41.667 108 61 2 9 116 178 283 1.46e-20 91.7
Msa0713740 MtrunA17_Chr7g0254261 31.522 184 118 3 14 197 89 264 5.86e-20 89.0
Msa0713740 MtrunA17_Chr3g0125801 40.833 120 63 3 8 121 10 127 6.86e-20 87.8
Msa0713740 MtrunA17_Chr6g0453751 43.617 94 43 3 12 96 20 112 1.10e-19 83.6
Msa0713740 MtrunA17_Chr7g0238631 43.269 104 57 2 14 117 113 214 1.79e-19 89.0
Msa0713740 MtrunA17_Chr3g0139671 41.346 104 59 2 14 117 85 186 5.35e-19 87.8
Msa0713740 MtrunA17_Chr3g0139671 35.644 101 62 3 14 113 33 131 9.46e-11 62.8
Msa0713740 MtrunA17_Chr7g0238651 42.268 97 53 2 17 111 10 105 2.77e-18 84.3
Msa0713740 MtrunA17_Chr7g0228401 34.746 118 75 2 37 154 301 416 1.04e-17 83.6
Msa0713740 MtrunA17_Chr1g0157731 40.385 104 60 2 14 117 91 192 1.26e-17 83.6
Msa0713740 MtrunA17_Chr1g0157731 35.644 101 62 3 14 113 39 137 2.04e-11 64.7
Msa0713740 MtrunA17_Chr7g0228531 29.677 155 106 3 11 165 217 368 1.34e-17 82.8
Msa0713740 MtrunA17_Chr5g0397841 43.000 100 55 2 11 110 107 204 6.30e-17 80.9
Msa0713740 MtrunA17_Chr7g0233061 31.757 148 87 4 10 149 176 317 1.55e-16 79.3
Msa0713740 MtrunA17_Chr1g0177901 46.154 78 42 0 34 111 12 89 1.76e-16 76.6
Msa0713740 MtrunA17_Chr5g0416341 36.434 129 74 3 17 145 29 149 2.51e-15 76.3
Msa0713740 MtrunA17_Chr8g0362231 40.000 100 58 2 17 116 25 122 3.64e-15 75.5
Msa0713740 MtrunA17_Chr7g0228481 28.395 162 109 5 11 170 217 373 1.76e-14 73.6
Msa0713740 MtrunA17_Chr7g0247141 55.319 47 21 0 1 47 1 47 3.41e-14 66.2
Msa0713740 MtrunA17_Chr1g0193901 52.542 59 26 2 12 69 11 68 1.94e-13 65.9
Msa0713740 MtrunA17_Chr1g0193891 52.542 59 26 2 12 69 11 68 1.94e-13 65.9
Msa0713740 MtrunA17_Chr1g0193871 52.542 59 26 2 12 69 11 68 1.94e-13 65.9
Msa0713740 MtrunA17_Chr1g0193881 52.542 59 26 2 12 69 11 68 1.94e-13 65.9
Msa0713740 MtrunA17_Chr5g0434871 56.818 44 19 0 75 118 2 45 1.23e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0713740 AT3G49690.1 48.232 311 126 6 1 284 1 303 3.99e-86 261
Msa0713740 AT5G65790.1 87.943 141 10 2 1 141 1 134 2.90e-85 261
Msa0713740 AT5G57620.1 90.244 123 12 0 1 123 1 123 8.99e-81 248
Msa0713740 AT4G37780.1 79.545 132 27 0 1 132 1 132 2.19e-76 236
Msa0713740 AT2G36890.1 83.193 119 20 0 1 119 1 119 3.52e-72 225
Msa0713740 AT2G36890.2 83.193 119 20 0 1 119 42 160 5.03e-72 226
Msa0713740 AT5G23000.1 64.286 154 55 0 1 154 1 154 1.81e-69 219
Msa0713740 AT5G56110.1 68.067 119 37 1 1 119 1 118 3.94e-55 182
Msa0713740 AT3G01140.2 64.407 118 41 1 1 118 1 117 1.79e-52 176
Msa0713740 AT5G15310.4 63.559 118 42 1 1 118 1 117 2.96e-52 172
Msa0713740 AT5G15310.1 63.559 118 42 1 1 118 1 117 1.14e-51 173
Msa0713740 AT5G15310.2 63.559 118 42 1 1 118 1 117 1.31e-51 173
Msa0713740 AT1G16490.1 63.793 116 41 1 2 117 4 118 1.95e-50 168
Msa0713740 AT5G16770.4 62.712 118 43 1 1 118 1 117 2.07e-50 170
Msa0713740 AT5G16770.3 62.712 118 43 1 1 118 1 117 2.07e-50 170
Msa0713740 AT3G02940.2 61.017 118 45 1 1 118 1 117 2.22e-50 169
Msa0713740 AT3G23250.1 63.248 117 42 1 1 117 1 116 3.10e-50 168
Msa0713740 AT3G02940.1 61.017 118 45 1 1 118 1 117 3.98e-50 169
Msa0713740 AT3G02940.3 61.017 118 45 1 1 118 1 117 3.98e-50 169
Msa0713740 AT5G16770.1 62.712 118 43 1 1 118 1 117 4.28e-50 169
Msa0713740 AT5G16770.2 62.712 118 43 1 1 118 1 117 4.28e-50 169
Msa0713740 AT3G61250.1 61.864 118 44 1 1 118 1 117 5.72e-50 168
Msa0713740 AT4G21440.1 61.864 118 44 1 1 118 1 117 8.06e-50 169
Msa0713740 AT4G28110.1 62.712 118 43 1 1 118 1 117 8.08e-50 167
Msa0713740 AT4G05100.1 63.866 119 41 2 1 118 1 118 1.54e-49 167
Msa0713740 AT3G47600.1 64.103 117 41 1 1 117 1 116 1.57e-49 168
Msa0713740 AT1G22640.1 45.455 176 80 2 1 176 1 160 1.64e-49 166
Msa0713740 AT2G16720.1 59.167 120 48 1 1 120 1 119 2.56e-49 165
Msa0713740 AT3G01140.1 63.478 115 41 1 4 118 47 160 2.74e-49 169
Msa0713740 AT1G08810.1 43.158 190 101 3 1 190 1 183 5.25e-49 165
Msa0713740 AT1G79180.1 62.931 116 42 1 2 117 4 118 5.32e-49 165
Msa0713740 AT4G17785.2 63.025 119 42 2 1 118 1 118 6.88e-49 167
Msa0713740 AT3G62610.1 59.055 127 51 1 1 127 1 126 7.28e-49 166
Msa0713740 AT5G62470.2 63.248 117 42 1 1 117 1 116 7.80e-49 167
Msa0713740 AT2G31180.1 63.248 117 42 1 1 117 1 116 8.75e-49 163
Msa0713740 AT4G34990.1 60.833 120 46 1 1 120 1 119 8.94e-49 164
Msa0713740 AT4G17785.1 63.025 119 42 2 1 118 1 118 9.75e-49 166
Msa0713740 AT4G38620.1 57.500 120 50 1 1 120 1 119 9.98e-49 164
Msa0713740 AT5G65230.1 61.017 118 45 1 1 118 1 117 1.69e-48 164
Msa0713740 AT4G09460.1 59.322 118 47 1 1 118 1 117 1.92e-48 162
Msa0713740 AT5G60890.1 42.291 227 114 5 1 216 1 221 2.17e-48 164
Msa0713740 AT1G35515.1 57.500 120 50 1 1 120 1 119 3.81e-48 160
Msa0713740 AT3G28470.1 63.063 111 40 1 1 111 1 110 4.40e-48 164
Msa0713740 AT1G34670.1 61.864 118 44 1 1 118 1 117 4.54e-48 165
Msa0713740 AT1G74650.1 62.712 118 43 1 1 118 1 117 6.29e-48 164
Msa0713740 AT5G07690.1 62.500 120 44 1 1 120 1 119 6.63e-48 164
Msa0713740 AT5G61420.2 62.712 118 43 1 1 118 1 117 8.50e-48 164
Msa0713740 AT3G28910.1 63.248 117 42 1 1 117 1 116 1.21e-47 162
Msa0713740 AT1G06180.1 61.983 121 45 1 1 121 1 120 1.48e-47 160
Msa0713740 AT1G56160.1 60.345 116 45 1 2 117 4 118 1.84e-47 161
Msa0713740 AT1G57560.1 41.518 224 106 5 1 217 1 206 2.66e-47 161
Msa0713740 AT5G10280.1 59.322 118 47 1 1 118 1 117 2.92e-47 162
Msa0713740 AT4G12350.1 61.864 118 44 1 1 118 1 117 3.62e-47 160
Msa0713740 AT4G22680.1 46.821 173 72 2 1 173 1 153 7.14e-47 159
Msa0713740 AT5G62470.1 63.248 117 41 2 1 117 1 115 8.38e-47 161
Msa0713740 AT3G12820.1 59.322 118 47 1 3 120 5 121 1.87e-46 157
Msa0713740 AT4G01680.3 60.684 117 45 1 1 117 1 116 1.96e-46 157
Msa0713740 AT5G16600.1 43.415 205 93 4 1 186 1 201 2.92e-46 159
Msa0713740 AT5G26660.1 58.333 120 49 1 1 120 1 119 4.25e-46 159
Msa0713740 AT1G18570.1 61.157 121 45 2 1 120 1 120 4.62e-46 159
Msa0713740 AT3G13540.1 58.261 115 47 1 4 118 15 128 6.35e-46 156
Msa0713740 AT2G47460.1 54.688 128 57 1 1 128 1 127 6.35e-46 159
Msa0713740 AT4G01680.1 60.684 117 45 1 1 117 1 116 7.80e-46 158
Msa0713740 AT5G07700.1 47.305 167 83 2 1 163 1 166 2.39e-45 157
Msa0713740 AT5G07700.2 47.305 167 83 2 1 163 1 166 2.39e-45 157
Msa0713740 AT1G57560.2 58.333 120 49 1 1 120 1 119 3.86e-45 155
Msa0713740 AT1G63910.1 52.593 135 63 1 1 135 1 134 4.96e-45 157
Msa0713740 AT5G49330.1 57.265 117 49 1 1 117 1 116 8.86e-45 155
Msa0713740 AT5G54230.1 60.169 118 46 1 1 118 1 117 1.14e-44 155
Msa0713740 AT1G09540.1 58.197 122 48 2 1 122 1 119 2.12e-44 155
Msa0713740 AT1G74080.1 57.500 120 50 1 1 120 1 119 3.33e-44 154
Msa0713740 AT1G66230.1 58.974 117 47 1 1 117 1 116 6.44e-44 152
Msa0713740 AT5G14340.1 56.410 117 50 1 1 117 13 128 7.08e-44 151
Msa0713740 AT5G62320.1 54.472 123 50 1 2 118 3 125 1.07e-43 150
Msa0713740 AT3G13890.2 55.932 118 51 1 1 118 1 117 2.61e-43 152
Msa0713740 AT4G01680.2 55.039 129 45 2 1 117 1 128 1.13e-42 150
Msa0713740 AT1G79180.2 48.993 149 42 2 2 117 4 151 2.59e-42 149
Msa0713740 AT3G12720.1 54.783 115 51 1 6 120 16 129 1.96e-41 146
Msa0713740 AT5G14750.1 55.652 115 50 1 13 127 17 130 2.79e-41 142
Msa0713740 AT5G52600.1 60.185 108 42 1 9 116 9 115 1.47e-40 140
Msa0713740 AT3G13890.1 51.969 127 51 2 1 118 1 126 3.12e-40 144
Msa0713740 AT3G27920.1 57.944 107 44 1 13 119 15 120 7.17e-40 140
Msa0713740 AT1G74430.1 54.167 120 54 1 1 120 1 119 8.08e-40 141
Msa0713740 AT5G12870.1 58.491 106 43 1 12 117 18 122 6.87e-39 139
Msa0713740 AT5G40330.1 56.190 105 45 1 13 117 13 116 1.23e-38 136
Msa0713740 AT5G55020.1 57.547 106 44 1 12 117 26 130 1.37e-38 143
Msa0713740 AT5G06100.1 55.963 109 47 1 8 116 28 135 1.50e-37 139
Msa0713740 AT1G18710.1 51.282 117 56 1 1 117 1 116 1.74e-37 134
Msa0713740 AT2G32460.1 56.190 105 45 1 12 116 18 121 2.03e-37 139
Msa0713740 AT2G32460.2 56.190 105 45 1 12 116 6 109 2.28e-37 139
Msa0713740 AT3G08500.1 56.364 110 47 1 8 117 26 134 2.68e-37 136
Msa0713740 AT5G06100.5 55.963 109 47 1 8 116 28 135 5.00e-37 139
Msa0713740 AT5G06100.2 55.963 109 47 1 8 116 28 135 5.00e-37 139
Msa0713740 AT5G06100.3 55.963 109 47 1 8 116 28 135 5.00e-37 139
Msa0713740 AT5G06100.4 55.963 109 47 1 8 116 28 135 5.00e-37 139
Msa0713740 AT5G35550.1 51.724 116 55 1 9 124 11 125 5.16e-37 133
Msa0713740 AT4G26930.1 55.769 104 45 1 12 115 19 121 1.01e-36 135
Msa0713740 AT3G27810.1 37.198 207 118 4 9 214 17 212 1.90e-36 130
Msa0713740 AT3G11440.2 51.852 108 51 1 9 116 38 144 2.62e-36 136
Msa0713740 AT3G01530.1 50.909 110 53 1 8 117 21 129 7.59e-36 129
Msa0713740 AT3G11440.3 51.852 108 51 1 9 116 38 144 1.07e-35 135
Msa0713740 AT3G11440.4 51.852 108 51 1 9 116 38 144 1.07e-35 135
Msa0713740 AT3G11440.1 51.852 108 51 1 9 116 38 144 1.07e-35 135
Msa0713740 AT4G25560.1 55.963 109 47 1 13 121 11 118 1.30e-35 130
Msa0713740 AT5G52260.1 57.522 113 47 1 9 121 9 120 2.46e-35 129
Msa0713740 AT5G40350.1 53.211 109 50 1 10 118 15 122 3.82e-35 127
Msa0713740 AT1G48000.1 57.798 109 43 2 12 118 32 139 4.03e-35 127
Msa0713740 AT3G48920.1 48.438 128 64 2 9 136 15 140 6.83e-35 127
Msa0713740 AT1G25340.1 56.075 107 46 1 10 116 16 121 1.33e-34 127
Msa0713740 AT2G26960.1 51.402 107 51 1 9 115 17 122 3.87e-34 129
Msa0713740 AT1G66370.1 50.862 116 52 2 1 116 1 111 4.10e-34 125
Msa0713740 AT4G13480.1 45.865 133 69 2 13 145 7 136 4.25e-33 123
Msa0713740 AT3G24310.1 54.808 104 46 1 13 116 19 121 5.46e-33 123
Msa0713740 AT2G47190.1 36.866 217 121 6 8 214 16 226 6.78e-33 122
Msa0713740 AT3G30210.1 40.854 164 87 4 13 167 28 190 6.89e-33 123
Msa0713740 AT1G68320.1 53.333 105 48 1 12 116 19 122 1.06e-32 122
Msa0713740 AT1G66380.1 55.238 105 46 1 12 116 8 111 1.13e-32 118
Msa0713740 AT5G14750.3 57.303 89 35 1 39 127 11 96 6.26e-32 117
Msa0713740 AT3G06490.1 55.556 108 47 1 8 115 15 121 1.78e-31 120
Msa0713740 AT1G66390.1 54.286 105 47 1 12 116 8 111 1.80e-31 118
Msa0713740 AT1G56650.1 54.286 105 47 1 12 116 8 111 3.69e-31 117
Msa0713740 AT5G26660.2 59.756 82 33 0 39 120 7 88 6.32e-31 119
Msa0713740 AT1G25340.2 53.271 107 44 2 10 116 16 116 6.47e-30 115
Msa0713740 AT1G25340.3 53.271 107 44 2 10 116 16 116 1.03e-29 115
Msa0713740 AT3G53200.1 52.381 105 49 1 12 116 9 112 1.71e-29 113
Msa0713740 AT5G49620.1 52.778 108 50 1 8 115 22 128 2.19e-29 114
Msa0713740 AT5G59780.3 46.364 110 58 1 13 122 9 117 7.01e-29 111
Msa0713740 AT3G46130.1 46.364 110 58 1 13 122 10 118 7.24e-29 112
Msa0713740 AT5G35550.2 58.140 86 36 0 39 124 43 128 1.00e-28 111
Msa0713740 AT3G47600.2 65.753 73 25 0 45 117 38 110 5.20e-28 111
Msa0713740 AT2G26950.1 43.750 112 61 2 9 120 13 122 8.42e-28 111
Msa0713740 AT2G23290.1 51.456 103 48 2 14 116 13 113 1.00e-27 110
Msa0713740 AT5G67300.1 34.831 178 109 3 10 182 2 177 1.17e-27 109
Msa0713740 AT3G27810.2 36.257 171 98 3 45 214 3 163 2.22e-27 105
Msa0713740 AT3G60460.1 47.222 108 55 2 9 115 8 114 3.16e-27 108
Msa0713740 AT3G12820.2 61.111 72 28 0 49 120 2 73 5.10e-27 105
Msa0713740 AT3G50060.1 43.511 131 65 3 10 133 2 130 9.35e-27 107
Msa0713740 AT1G18960.1 45.192 104 53 2 14 117 10 109 2.84e-26 105
Msa0713740 AT4G37260.1 48.544 103 51 2 14 116 13 113 4.57e-26 105
Msa0713740 AT5G40350.2 58.108 74 31 0 45 118 4 77 4.57e-26 102
Msa0713740 AT5G49620.2 46.400 125 46 3 8 115 22 142 7.34e-26 105
Msa0713740 AT1G66380.3 63.889 72 26 0 45 116 7 78 1.03e-25 99.0
Msa0713740 AT3G53200.2 61.644 73 28 0 44 116 7 79 1.43e-25 101
Msa0713740 AT5G59780.2 54.430 79 36 0 44 122 18 96 5.77e-25 100
Msa0713740 AT3G46130.4 54.430 79 36 0 44 122 18 96 8.49e-25 100
Msa0713740 AT1G17950.1 44.954 109 56 3 14 122 5 109 1.18e-24 100
Msa0713740 AT3G27785.1 46.296 108 56 2 9 116 184 289 1.42e-24 103
Msa0713740 AT5G58850.1 41.270 126 71 3 11 135 102 225 3.79e-24 102
Msa0713740 AT3G46130.3 54.545 77 35 0 46 122 10 86 4.37e-24 98.2
Msa0713740 AT5G17800.1 39.516 124 73 2 14 137 93 214 9.08e-24 99.4
Msa0713740 AT3G09230.1 45.714 105 55 2 14 118 55 157 9.46e-24 100
Msa0713740 AT2G39880.1 48.544 103 51 2 14 116 50 150 1.27e-23 99.8
Msa0713740 AT3G55730.1 49.515 103 50 2 14 116 56 156 1.38e-23 100
Msa0713740 AT1G69560.1 38.889 126 70 3 9 134 102 220 1.84e-23 99.0
Msa0713740 AT1G69560.2 38.889 126 70 3 9 134 118 236 2.13e-23 99.0
Msa0713740 AT5G40360.1 42.241 116 64 3 12 127 156 268 2.75e-23 99.0
Msa0713740 AT2G25230.1 46.602 103 53 2 9 111 21 121 4.05e-23 95.9
Msa0713740 AT1G22640.3 38.983 118 57 1 59 176 1 103 3.61e-22 92.4
Msa0713740 AT4G18770.1 42.202 109 61 2 9 117 212 318 8.36e-22 95.5
Msa0713740 AT5G14750.4 55.072 69 31 0 59 127 1 69 1.02e-21 89.7
Msa0713740 AT5G14750.2 55.072 69 31 0 59 127 1 69 1.02e-21 89.7
Msa0713740 AT1G26780.1 38.211 123 70 3 14 136 98 214 3.61e-21 91.7
Msa0713740 AT1G73410.1 46.602 103 53 2 14 116 6 106 4.54e-21 90.5
Msa0713740 AT5G11050.1 38.983 118 68 3 11 128 102 215 4.78e-21 93.2
Msa0713740 AT1G26780.2 38.211 123 70 3 14 136 98 214 5.63e-21 92.4
Msa0713740 AT3G09370.2 44.660 103 55 2 14 116 135 235 5.92e-21 93.6
Msa0713740 AT1G73410.2 32.571 175 104 4 14 184 6 170 6.03e-21 89.4
Msa0713740 AT3G09370.1 44.660 103 55 2 14 116 130 230 6.35e-21 93.2
Msa0713740 AT3G09370.3 44.660 103 55 2 14 116 143 243 7.11e-21 93.2
Msa0713740 AT1G71030.2 53.731 67 31 0 52 118 5 71 1.08e-20 87.8
Msa0713740 AT1G71030.1 53.731 67 31 0 52 118 19 85 1.26e-20 88.2
Msa0713740 AT3G23250.2 62.712 59 22 0 59 117 1 59 2.53e-20 88.2
Msa0713740 AT4G33450.1 40.741 108 62 2 9 116 14 119 5.02e-20 87.8
Msa0713740 AT5G02320.1 42.308 104 58 2 14 117 127 228 1.17e-19 89.7
Msa0713740 AT5G02320.1 34.653 101 63 3 14 113 75 173 4.50e-11 63.9
Msa0713740 AT5G02320.2 42.308 104 58 2 14 117 127 228 1.17e-19 89.7
Msa0713740 AT5G02320.2 34.653 101 63 3 14 113 75 173 4.50e-11 63.9
Msa0713740 AT5G02320.3 42.308 104 58 2 14 117 67 168 1.24e-19 89.4
Msa0713740 AT5G02320.3 34.653 101 63 3 14 113 15 113 4.68e-11 63.9
Msa0713740 AT2G02820.3 30.476 210 127 8 17 221 33 228 6.49e-19 86.3
Msa0713740 AT5G40430.1 35.938 128 72 3 9 136 49 166 9.16e-19 84.3
Msa0713740 AT2G02820.1 39.496 119 64 3 17 135 33 143 2.90e-18 85.5
Msa0713740 AT2G02820.2 39.496 119 64 3 17 135 33 143 3.73e-18 85.1
Msa0713740 AT4G32730.1 40.385 104 60 2 14 117 87 188 5.25e-18 85.1
Msa0713740 AT4G32730.5 40.385 104 60 2 14 117 87 188 5.30e-18 85.1
Msa0713740 AT4G32730.4 40.385 104 60 2 14 117 87 188 5.30e-18 85.1
Msa0713740 AT4G32730.3 40.385 104 60 2 14 117 87 188 5.30e-18 85.1
Msa0713740 AT4G32730.2 40.385 104 60 2 14 117 87 188 5.30e-18 85.1
Msa0713740 AT3G29020.1 36.538 104 64 2 14 117 65 166 6.37e-18 81.6
Msa0713740 AT1G66380.2 46.341 82 43 1 12 93 8 88 9.62e-18 77.8
Msa0713740 AT3G29020.2 33.071 127 77 3 14 140 67 185 1.27e-17 82.0
Msa0713740 AT5G11510.3 39.423 104 61 2 14 117 81 182 1.69e-17 83.6
Msa0713740 AT5G11510.1 39.423 104 61 2 14 117 81 182 1.69e-17 83.6
Msa0713740 AT5G11510.4 39.423 104 61 2 14 117 81 182 1.69e-17 83.6
Msa0713740 AT5G11510.5 39.423 104 61 2 14 117 81 182 1.72e-17 83.6
Msa0713740 AT5G11510.2 39.423 104 61 2 14 117 81 182 1.76e-17 83.6
Msa0713740 AT2G37630.1 38.938 113 62 4 17 127 7 114 2.09e-16 79.3
Msa0713740 AT1G14350.2 42.000 100 56 2 17 116 28 125 5.62e-16 78.6
Msa0713740 AT1G14350.1 42.000 100 56 2 17 116 28 125 5.62e-16 78.6
Msa0713740 AT4G00540.2 39.823 113 57 3 11 117 100 207 1.68e-15 77.0
Msa0713740 AT4G00540.1 39.823 113 57 3 11 117 98 205 2.44e-15 76.6
Msa0713740 AT5G39700.1 34.513 113 71 3 9 121 51 160 7.42e-14 69.3
Msa0713740 AT4G25560.2 56.000 50 22 0 72 121 3 52 3.60e-12 65.1
Msa0713740 AT3G18100.3 36.735 98 60 2 12 109 496 591 7.59e-11 63.5
Msa0713740 AT5G59780.1 51.020 49 24 0 74 122 4 52 8.02e-11 60.5
Msa0713740 AT3G18100.1 36.735 98 60 2 12 109 544 639 8.30e-11 63.5
Msa0713740 AT3G18100.4 36.735 98 60 2 12 109 383 478 8.93e-11 63.2
Msa0713740 AT3G18100.2 36.735 98 60 2 12 109 331 426 9.99e-11 63.2

Find 73 sgRNAs with CRISPR-Local

Find 196 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGCCACCATGTTTAATATT+TGG 0.164222 5_1:-6081306 None:intergenic
TTTGAGGAGTCTAGGTATTT+TGG 0.172232 5_1:+6082253 Msa0713740:CDS
ATATGAGTTCAGCTCCTTAT+TGG 0.208038 5_1:+6081822 Msa0713740:CDS
GTATTACTCACAATGGAAAA+AGG 0.210111 5_1:-6081950 None:intergenic
CAATAAAGGATTTGTGTATA+TGG 0.227093 5_1:+6082286 Msa0713740:exon
GTTCATATCATAATCAATTA+TGG 0.256120 5_1:-6081888 None:intergenic
TTGGAATGCAAATGCAATAA+AGG 0.260472 5_1:+6082272 Msa0713740:CDS
GAATTTGATGGTGGCGGCTT+CGG 0.274867 5_1:+6081790 Msa0713740:CDS
AATTTGATGGTGGCGGCTTC+GGG 0.281895 5_1:+6081791 Msa0713740:CDS
AACCCTTGAAATATATTTGA+TGG 0.289827 5_1:-6082001 None:intergenic
AAAATGGTACTGGTGGAAAT+TGG 0.309864 5_1:+6081026 Msa0713740:CDS
TTCTATCCATTATTTGTTGT+TGG 0.313622 5_1:-6082066 None:intergenic
TGTGAACCAACAACAAATAA+TGG 0.320313 5_1:+6082060 Msa0713740:CDS
TTGGGGAGATATGAACTCTT+TGG 0.325613 5_1:+6082174 Msa0713740:CDS
ATTATGGATGAATTTGAAAC+TGG 0.368691 5_1:-6081872 None:intergenic
GAATACTCTGCAGGCCAATA+AGG 0.382763 5_1:-6081836 None:intergenic
CTTGTTTCATGTTGCTAACT+CGG 0.393201 5_1:-6081745 None:intergenic
AATAATGTCGTCTTCTTCTT+CGG 0.393994 5_1:-6081331 None:intergenic
AATAAAGGATTTGTGTATAT+GGG 0.405339 5_1:+6082287 Msa0713740:exon
GGAAAAGCTGTCGTCTTAGA+TGG 0.410472 5_1:+6081268 Msa0713740:CDS
ATAATGGATAGAACAATTGA+TGG 0.418211 5_1:+6082076 Msa0713740:CDS
CAACCATCAAATATATTTCA+AGG 0.418574 5_1:+6081998 Msa0713740:CDS
AAGTCTTACATAGAACAAAA+TGG 0.418654 5_1:+6081010 Msa0713740:CDS
GGAGCTCTTCCCATGTTTGT+TGG 0.421948 5_1:-6080926 None:intergenic
GCTCCTTCCTTTGTTTCCCA+AGG 0.424838 5_1:-6081700 None:intergenic
TTCAACAGAAAGCACTAGTT+GGG 0.432311 5_1:+6082156 Msa0713740:CDS
CTTGTGGAACTGATCCTTGT+TGG 0.444815 5_1:-6082219 None:intergenic
CTTGAAATATATTTGATGGT+TGG 0.466174 5_1:-6081997 None:intergenic
GGTTGAAGAAGAAGCTCCTT+GGG 0.469664 5_1:+6081684 Msa0713740:CDS
CTTCAACAGAAAGCACTAGT+TGG 0.476988 5_1:+6082155 Msa0713740:CDS
ATTGCTCTACCTCAAAAGAT+AGG 0.485817 5_1:+6081049 Msa0713740:CDS
AGAAATAAATCAGAATTTGA+TGG 0.487396 5_1:+6081778 Msa0713740:CDS
ATAATGATATAAAGAACTAC+TGG 0.487898 5_1:+6081654 Msa0713740:CDS
CATCAACTCATAATAAAGGT+TGG 0.499561 5_1:+6080884 None:intergenic
ACAAGCTCACTTAAATCCCT+TGG 0.501931 5_1:-6082034 None:intergenic
TACATAGAACAAAATGGTAC+TGG 0.506829 5_1:+6081016 Msa0713740:CDS
AAATCAGAATTTGATGGTGG+CGG 0.512314 5_1:+6081784 Msa0713740:CDS
AACCATCAAATATATTTCAA+GGG 0.521432 5_1:+6081999 Msa0713740:CDS
GCATCTTCTTCAGGTGACCA+TGG 0.528317 5_1:-6080980 None:intergenic
AGGTTGAAGAAGAAGCTCCT+TGG 0.531276 5_1:+6081683 Msa0713740:CDS
TCTTTGGTTTATGACTATGA+AGG 0.535991 5_1:+6082190 Msa0713740:CDS
TCTATGTTAGCATCGGAAGC+AGG 0.539728 5_1:+6081361 Msa0713740:CDS
TGCAGCCTCTATGTTAGCAT+CGG 0.545351 5_1:+6081354 Msa0713740:CDS
ATATCATTATCCGTTCGTCC+TGG 0.550639 5_1:-6081641 None:intergenic
GGATGAACAGAATACTCTGC+AGG 0.563118 5_1:-6081845 None:intergenic
TGTAATTGTATTACTCACAA+TGG 0.565477 5_1:-6081957 None:intergenic
TAAAGAACTACTGGAACACT+AGG 0.569888 5_1:+6081663 Msa0713740:CDS
ATCATAGCAGCACAATTACC+AGG 0.572301 5_1:+6081623 Msa0713740:CDS
AAAACTCATACCAACAAACA+TGG 0.575376 5_1:+6080916 Msa0713740:exon
AAAGGATTTGTGTATATGGG+GGG 0.578676 5_1:+6082290 Msa0713740:exon
AGAAGCTCCTTGGGAAACAA+AGG 0.580754 5_1:+6081693 Msa0713740:CDS
ATCCAGGACTTAAGAGATGT+GGG 0.582703 5_1:+6081247 Msa0713740:intron
CTTAGACCAAATATTAAACA+TGG 0.584666 5_1:+6081300 Msa0713740:CDS
TATGAAGGTTGTTGCCAACA+AGG 0.584761 5_1:+6082205 Msa0713740:CDS
ATAGAACAAAATGGTACTGG+TGG 0.585934 5_1:+6081019 Msa0713740:CDS
TCAAAAGCAATAGCATCTTG+TGG 0.589541 5_1:-6082235 None:intergenic
ATAAAGGATTTGTGTATATG+GGG 0.592865 5_1:+6082288 Msa0713740:exon
TGCTTCCGATGCTAACATAG+AGG 0.594035 5_1:-6081359 None:intergenic
AGTAATACAATTACAAACAA+TGG 0.595870 5_1:+6081965 Msa0713740:CDS
TCTATTGACATGAGCAATGG+TGG 0.599559 5_1:+6082115 Msa0713740:CDS
TAAAGGATTTGTGTATATGG+GGG 0.611554 5_1:+6082289 Msa0713740:exon
GATCCAGGACTTAAGAGATG+TGG 0.613640 5_1:+6081246 Msa0713740:intron
AGCACAATTACCAGGACGAA+CGG 0.615114 5_1:+6081631 Msa0713740:CDS
ACATTGGCTTTGTCACAGCA+AGG 0.615641 5_1:-6080947 None:intergenic
AATACAATTACAAACAATGG+TGG 0.622206 5_1:+6081968 Msa0713740:CDS
GATGAATTTGAAACTGGCAT+AGG 0.626545 5_1:-6081866 None:intergenic
GCTCCTTGGGAAACAAAGGA+AGG 0.636745 5_1:+6081697 Msa0713740:CDS
AATAAATCAGAATTTGATGG+TGG 0.642797 5_1:+6081781 Msa0713740:CDS
GAATCTATTGACATGAGCAA+TGG 0.644932 5_1:+6082112 Msa0713740:CDS
AGACCAAATATTAAACATGG+TGG 0.648958 5_1:+6081303 Msa0713740:CDS
AAGGATTTGTGTATATGGGG+GGG 0.656070 5_1:+6082291 Msa0713740:exon
AAACTCATACCAACAAACAT+GGG 0.665666 5_1:+6080917 Msa0713740:exon
TCAACAGAAAGCACTAGTTG+GGG 0.700480 5_1:+6082157 Msa0713740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAATTAATCATTATGTA+TGG - chr5_1:6081148-6081167 None:intergenic 10.0%
!!! CTAATTAATTAATAAGTTTT+AGG - chr5_1:6081457-6081476 None:intergenic 10.0%
!! ATTAAATTAATCATTATGTA+TGG - chr5_1:6081148-6081167 None:intergenic 10.0%
!!! CTAATTAATTAATAAGTTTT+AGG - chr5_1:6081457-6081476 None:intergenic 10.0%
!!! AATTTATTTGTTTATTTCTG+TGG + chr5_1:6081215-6081234 Msa0713740:intron 15.0%
!!! AATTTATTTGTTTATTTCTG+TGG + chr5_1:6081215-6081234 Msa0713740:intron 15.0%
!! TTCTTTGAATATGTATATGT+AGG + chr5_1:6081594-6081613 Msa0713740:intron 20.0%
!! ATAATGATATAAAGAACTAC+TGG + chr5_1:6081654-6081673 Msa0713740:CDS 20.0%
!! AGAAATAAATCAGAATTTGA+TGG + chr5_1:6081778-6081797 Msa0713740:CDS 20.0%
!! GTTCATATCATAATCAATTA+TGG - chr5_1:6081891-6081910 None:intergenic 20.0%
!! AGTAATACAATTACAAACAA+TGG + chr5_1:6081965-6081984 Msa0713740:CDS 20.0%
!! AACCATCAAATATATTTCAA+GGG + chr5_1:6081999-6082018 Msa0713740:CDS 20.0%
!! AATAAAGGATTTGTGTATAT+GGG + chr5_1:6082287-6082306 Msa0713740:exon 20.0%
!! TTCTTTGAATATGTATATGT+AGG + chr5_1:6081594-6081613 Msa0713740:intron 20.0%
!! ATAATGATATAAAGAACTAC+TGG + chr5_1:6081654-6081673 Msa0713740:CDS 20.0%
!! AGAAATAAATCAGAATTTGA+TGG + chr5_1:6081778-6081797 Msa0713740:CDS 20.0%
!! GTTCATATCATAATCAATTA+TGG - chr5_1:6081891-6081910 None:intergenic 20.0%
!! AGTAATACAATTACAAACAA+TGG + chr5_1:6081965-6081984 Msa0713740:CDS 20.0%
!! AACCATCAAATATATTTCAA+GGG + chr5_1:6081999-6082018 Msa0713740:CDS 20.0%
!! AATAAAGGATTTGTGTATAT+GGG + chr5_1:6082287-6082306 Msa0713740:exon 20.0%
! AAGTCTTACATAGAACAAAA+TGG + chr5_1:6081010-6081029 Msa0713740:CDS 25.0%
! CTTAGACCAAATATTAAACA+TGG + chr5_1:6081300-6081319 Msa0713740:CDS 25.0%
! AATTAGAGTCTACAAAGTTA+TGG - chr5_1:6081561-6081580 None:intergenic 25.0%
! TTTGAATATGTATATGTAGG+TGG + chr5_1:6081597-6081616 Msa0713740:intron 25.0%
! AATAAATCAGAATTTGATGG+TGG + chr5_1:6081781-6081800 Msa0713740:CDS 25.0%
!! ATTATGGATGAATTTGAAAC+TGG - chr5_1:6081875-6081894 None:intergenic 25.0%
! TATTACTCACAATGGAAAAA+GGG - chr5_1:6081952-6081971 None:intergenic 25.0%
! TGTAATTGTATTACTCACAA+TGG - chr5_1:6081960-6081979 None:intergenic 25.0%
! AATACAATTACAAACAATGG+TGG + chr5_1:6081968-6081987 Msa0713740:CDS 25.0%
!! CTTGAAATATATTTGATGGT+TGG - chr5_1:6082000-6082019 None:intergenic 25.0%
! CAACCATCAAATATATTTCA+AGG + chr5_1:6081998-6082017 Msa0713740:CDS 25.0%
! AACCCTTGAAATATATTTGA+TGG - chr5_1:6082004-6082023 None:intergenic 25.0%
!!! TTCTATCCATTATTTGTTGT+TGG - chr5_1:6082069-6082088 None:intergenic 25.0%
!!! ATAATGGATAGAACAATTGA+TGG + chr5_1:6082076-6082095 Msa0713740:CDS 25.0%
!!! AGAACAATTGATGGTTTTTA+TGG + chr5_1:6082085-6082104 Msa0713740:CDS 25.0%
!!! AATTGATGGTTTTTATGGAA+TGG + chr5_1:6082090-6082109 Msa0713740:CDS 25.0%
! CAATAAAGGATTTGTGTATA+TGG + chr5_1:6082286-6082305 Msa0713740:exon 25.0%
! ATAAAGGATTTGTGTATATG+GGG + chr5_1:6082288-6082307 Msa0713740:exon 25.0%
! AAGTCTTACATAGAACAAAA+TGG + chr5_1:6081010-6081029 Msa0713740:CDS 25.0%
! CTTAGACCAAATATTAAACA+TGG + chr5_1:6081300-6081319 Msa0713740:CDS 25.0%
! AATTAGAGTCTACAAAGTTA+TGG - chr5_1:6081561-6081580 None:intergenic 25.0%
! TTTGAATATGTATATGTAGG+TGG + chr5_1:6081597-6081616 Msa0713740:intron 25.0%
! AATAAATCAGAATTTGATGG+TGG + chr5_1:6081781-6081800 Msa0713740:CDS 25.0%
!! ATTATGGATGAATTTGAAAC+TGG - chr5_1:6081875-6081894 None:intergenic 25.0%
! TATTACTCACAATGGAAAAA+GGG - chr5_1:6081952-6081971 None:intergenic 25.0%
! TGTAATTGTATTACTCACAA+TGG - chr5_1:6081960-6081979 None:intergenic 25.0%
! AATACAATTACAAACAATGG+TGG + chr5_1:6081968-6081987 Msa0713740:CDS 25.0%
!! CTTGAAATATATTTGATGGT+TGG - chr5_1:6082000-6082019 None:intergenic 25.0%
! CAACCATCAAATATATTTCA+AGG + chr5_1:6081998-6082017 Msa0713740:CDS 25.0%
! AACCCTTGAAATATATTTGA+TGG - chr5_1:6082004-6082023 None:intergenic 25.0%
!!! TTCTATCCATTATTTGTTGT+TGG - chr5_1:6082069-6082088 None:intergenic 25.0%
!!! ATAATGGATAGAACAATTGA+TGG + chr5_1:6082076-6082095 Msa0713740:CDS 25.0%
!!! AGAACAATTGATGGTTTTTA+TGG + chr5_1:6082085-6082104 Msa0713740:CDS 25.0%
!!! AATTGATGGTTTTTATGGAA+TGG + chr5_1:6082090-6082109 Msa0713740:CDS 25.0%
! CAATAAAGGATTTGTGTATA+TGG + chr5_1:6082286-6082305 Msa0713740:exon 25.0%
! ATAAAGGATTTGTGTATATG+GGG + chr5_1:6082288-6082307 Msa0713740:exon 25.0%
AAAACTCATACCAACAAACA+TGG + chr5_1:6080916-6080935 Msa0713740:exon 30.0%
AAACTCATACCAACAAACAT+GGG + chr5_1:6080917-6080936 Msa0713740:exon 30.0%
TACATAGAACAAAATGGTAC+TGG + chr5_1:6081016-6081035 Msa0713740:CDS 30.0%
AGACCAAATATTAAACATGG+TGG + chr5_1:6081303-6081322 Msa0713740:CDS 30.0%
AAGCCACCATGTTTAATATT+TGG - chr5_1:6081309-6081328 None:intergenic 30.0%
AATAATGTCGTCTTCTTCTT+CGG - chr5_1:6081334-6081353 None:intergenic 30.0%
TTATTTCCAAGTAGATAGCT+CGG - chr5_1:6081515-6081534 None:intergenic 30.0%
GTATTACTCACAATGGAAAA+AGG - chr5_1:6081953-6081972 None:intergenic 30.0%
! AAGGGTTTGAAAATTTTCCA+AGG + chr5_1:6082017-6082036 Msa0713740:CDS 30.0%
! AGGGTTTGAAAATTTTCCAA+GGG + chr5_1:6082018-6082037 Msa0713740:CDS 30.0%
TGTGAACCAACAACAAATAA+TGG + chr5_1:6082060-6082079 Msa0713740:CDS 30.0%
! TCTTTGGTTTATGACTATGA+AGG + chr5_1:6082190-6082209 Msa0713740:CDS 30.0%
TTGGAATGCAAATGCAATAA+AGG + chr5_1:6082272-6082291 Msa0713740:CDS 30.0%
TAAAGGATTTGTGTATATGG+GGG + chr5_1:6082289-6082308 Msa0713740:exon 30.0%
AAAACTCATACCAACAAACA+TGG + chr5_1:6080916-6080935 Msa0713740:exon 30.0%
AAACTCATACCAACAAACAT+GGG + chr5_1:6080917-6080936 Msa0713740:exon 30.0%
TACATAGAACAAAATGGTAC+TGG + chr5_1:6081016-6081035 Msa0713740:CDS 30.0%
AGACCAAATATTAAACATGG+TGG + chr5_1:6081303-6081322 Msa0713740:CDS 30.0%
AAGCCACCATGTTTAATATT+TGG - chr5_1:6081309-6081328 None:intergenic 30.0%
AATAATGTCGTCTTCTTCTT+CGG - chr5_1:6081334-6081353 None:intergenic 30.0%
TTATTTCCAAGTAGATAGCT+CGG - chr5_1:6081515-6081534 None:intergenic 30.0%
GTATTACTCACAATGGAAAA+AGG - chr5_1:6081953-6081972 None:intergenic 30.0%
! AAGGGTTTGAAAATTTTCCA+AGG + chr5_1:6082017-6082036 Msa0713740:CDS 30.0%
! AGGGTTTGAAAATTTTCCAA+GGG + chr5_1:6082018-6082037 Msa0713740:CDS 30.0%
TGTGAACCAACAACAAATAA+TGG + chr5_1:6082060-6082079 Msa0713740:CDS 30.0%
! TCTTTGGTTTATGACTATGA+AGG + chr5_1:6082190-6082209 Msa0713740:CDS 30.0%
TTGGAATGCAAATGCAATAA+AGG + chr5_1:6082272-6082291 Msa0713740:CDS 30.0%
TAAAGGATTTGTGTATATGG+GGG + chr5_1:6082289-6082308 Msa0713740:exon 30.0%
GACAAAGCCAATGTCAAAAA+AGG + chr5_1:6080956-6080975 Msa0713740:CDS 35.0%
! TTGAGTTTTGCATCTTCTTC+AGG - chr5_1:6080992-6081011 None:intergenic 35.0%
! ATAGAACAAAATGGTACTGG+TGG + chr5_1:6081019-6081038 Msa0713740:CDS 35.0%
!! AAAATGGTACTGGTGGAAAT+TGG + chr5_1:6081026-6081045 Msa0713740:CDS 35.0%
ATTGCTCTACCTCAAAAGAT+AGG + chr5_1:6081049-6081068 Msa0713740:CDS 35.0%
! TGTAGCATACCTATCTTTTG+AGG - chr5_1:6081061-6081080 None:intergenic 35.0%
CAAAAGATAGGTATGCTACA+TGG + chr5_1:6081061-6081080 Msa0713740:intron 35.0%
TAAAGAACTACTGGAACACT+AGG + chr5_1:6081663-6081682 Msa0713740:CDS 35.0%
CTTGTTTCATGTTGCTAACT+CGG - chr5_1:6081748-6081767 None:intergenic 35.0%
!! AAATCAGAATTTGATGGTGG+CGG + chr5_1:6081784-6081803 Msa0713740:CDS 35.0%
ATATGAGTTCAGCTCCTTAT+TGG + chr5_1:6081822-6081841 Msa0713740:CDS 35.0%
! GATGAATTTGAAACTGGCAT+AGG - chr5_1:6081869-6081888 None:intergenic 35.0%
GAATCTATTGACATGAGCAA+TGG + chr5_1:6082112-6082131 Msa0713740:CDS 35.0%
!! TTCAACAGAAAGCACTAGTT+GGG + chr5_1:6082156-6082175 Msa0713740:CDS 35.0%
TCAAAAGCAATAGCATCTTG+TGG - chr5_1:6082238-6082257 None:intergenic 35.0%
!! ACAAGATGCTATTGCTTTTG+AGG + chr5_1:6082237-6082256 Msa0713740:CDS 35.0%
! TTTGAGGAGTCTAGGTATTT+TGG + chr5_1:6082253-6082272 Msa0713740:CDS 35.0%
AAAGGATTTGTGTATATGGG+GGG + chr5_1:6082290-6082309 Msa0713740:exon 35.0%
GACAAAGCCAATGTCAAAAA+AGG + chr5_1:6080956-6080975 Msa0713740:CDS 35.0%
! TTGAGTTTTGCATCTTCTTC+AGG - chr5_1:6080992-6081011 None:intergenic 35.0%
! ATAGAACAAAATGGTACTGG+TGG + chr5_1:6081019-6081038 Msa0713740:CDS 35.0%
!! AAAATGGTACTGGTGGAAAT+TGG + chr5_1:6081026-6081045 Msa0713740:CDS 35.0%
ATTGCTCTACCTCAAAAGAT+AGG + chr5_1:6081049-6081068 Msa0713740:CDS 35.0%
! TGTAGCATACCTATCTTTTG+AGG - chr5_1:6081061-6081080 None:intergenic 35.0%
CAAAAGATAGGTATGCTACA+TGG + chr5_1:6081061-6081080 Msa0713740:intron 35.0%
TAAAGAACTACTGGAACACT+AGG + chr5_1:6081663-6081682 Msa0713740:CDS 35.0%
CTTGTTTCATGTTGCTAACT+CGG - chr5_1:6081748-6081767 None:intergenic 35.0%
!! AAATCAGAATTTGATGGTGG+CGG + chr5_1:6081784-6081803 Msa0713740:CDS 35.0%
ATATGAGTTCAGCTCCTTAT+TGG + chr5_1:6081822-6081841 Msa0713740:CDS 35.0%
! GATGAATTTGAAACTGGCAT+AGG - chr5_1:6081869-6081888 None:intergenic 35.0%
GAATCTATTGACATGAGCAA+TGG + chr5_1:6082112-6082131 Msa0713740:CDS 35.0%
!! TTCAACAGAAAGCACTAGTT+GGG + chr5_1:6082156-6082175 Msa0713740:CDS 35.0%
TCAAAAGCAATAGCATCTTG+TGG - chr5_1:6082238-6082257 None:intergenic 35.0%
!! ACAAGATGCTATTGCTTTTG+AGG + chr5_1:6082237-6082256 Msa0713740:CDS 35.0%
! TTTGAGGAGTCTAGGTATTT+TGG + chr5_1:6082253-6082272 Msa0713740:CDS 35.0%
AAAGGATTTGTGTATATGGG+GGG + chr5_1:6082290-6082309 Msa0713740:exon 35.0%
!!! CCATGGACCTTTTTTGACAT+TGG - chr5_1:6080966-6080985 None:intergenic 40.0%
CCAATGTCAAAAAAGGTCCA+TGG + chr5_1:6080963-6080982 Msa0713740:CDS 40.0%
ATCCAGGACTTAAGAGATGT+GGG + chr5_1:6081247-6081266 Msa0713740:intron 40.0%
ATCATAGCAGCACAATTACC+AGG + chr5_1:6081623-6081642 Msa0713740:CDS 40.0%
ATATCATTATCCGTTCGTCC+TGG - chr5_1:6081644-6081663 None:intergenic 40.0%
CTCACAATGGAAAAAGGGTT+TGG - chr5_1:6081947-6081966 None:intergenic 40.0%
ACAAGCTCACTTAAATCCCT+TGG - chr5_1:6082037-6082056 None:intergenic 40.0%
TCTATTGACATGAGCAATGG+TGG + chr5_1:6082115-6082134 Msa0713740:CDS 40.0%
!! CTTCAACAGAAAGCACTAGT+TGG + chr5_1:6082155-6082174 Msa0713740:CDS 40.0%
!! TCAACAGAAAGCACTAGTTG+GGG + chr5_1:6082157-6082176 Msa0713740:CDS 40.0%
TTGGGGAGATATGAACTCTT+TGG + chr5_1:6082174-6082193 Msa0713740:CDS 40.0%
TATGAAGGTTGTTGCCAACA+AGG + chr5_1:6082205-6082224 Msa0713740:CDS 40.0%
!! CTATTGCTTTTGAGGAGTCT+AGG + chr5_1:6082245-6082264 Msa0713740:CDS 40.0%
AAGGATTTGTGTATATGGGG+GGG + chr5_1:6082291-6082310 Msa0713740:exon 40.0%
!!! CCATGGACCTTTTTTGACAT+TGG - chr5_1:6080966-6080985 None:intergenic 40.0%
CCAATGTCAAAAAAGGTCCA+TGG + chr5_1:6080963-6080982 Msa0713740:CDS 40.0%
ATCCAGGACTTAAGAGATGT+GGG + chr5_1:6081247-6081266 Msa0713740:intron 40.0%
ATCATAGCAGCACAATTACC+AGG + chr5_1:6081623-6081642 Msa0713740:CDS 40.0%
ATATCATTATCCGTTCGTCC+TGG - chr5_1:6081644-6081663 None:intergenic 40.0%
CTCACAATGGAAAAAGGGTT+TGG - chr5_1:6081947-6081966 None:intergenic 40.0%
ACAAGCTCACTTAAATCCCT+TGG - chr5_1:6082037-6082056 None:intergenic 40.0%
TCTATTGACATGAGCAATGG+TGG + chr5_1:6082115-6082134 Msa0713740:CDS 40.0%
!! CTTCAACAGAAAGCACTAGT+TGG + chr5_1:6082155-6082174 Msa0713740:CDS 40.0%
!! TCAACAGAAAGCACTAGTTG+GGG + chr5_1:6082157-6082176 Msa0713740:CDS 40.0%
TTGGGGAGATATGAACTCTT+TGG + chr5_1:6082174-6082193 Msa0713740:CDS 40.0%
TATGAAGGTTGTTGCCAACA+AGG + chr5_1:6082205-6082224 Msa0713740:CDS 40.0%
!! CTATTGCTTTTGAGGAGTCT+AGG + chr5_1:6082245-6082264 Msa0713740:CDS 40.0%
AAGGATTTGTGTATATGGGG+GGG + chr5_1:6082291-6082310 Msa0713740:exon 40.0%
!! ACATTGGCTTTGTCACAGCA+AGG - chr5_1:6080950-6080969 None:intergenic 45.0%
GATCCAGGACTTAAGAGATG+TGG + chr5_1:6081246-6081265 Msa0713740:intron 45.0%
TTCCCACATCTCTTAAGTCC+TGG - chr5_1:6081252-6081271 None:intergenic 45.0%
GGAAAAGCTGTCGTCTTAGA+TGG + chr5_1:6081268-6081287 Msa0713740:CDS 45.0%
TGCAGCCTCTATGTTAGCAT+CGG + chr5_1:6081354-6081373 Msa0713740:CDS 45.0%
TGCTTCCGATGCTAACATAG+AGG - chr5_1:6081362-6081381 None:intergenic 45.0%
! TCTATGTTAGCATCGGAAGC+AGG + chr5_1:6081361-6081380 Msa0713740:CDS 45.0%
TACCAACCGAGCTATCTACT+TGG + chr5_1:6081506-6081525 Msa0713740:intron 45.0%
TTCCAAGTAGATAGCTCGGT+TGG - chr5_1:6081511-6081530 None:intergenic 45.0%
AGCACAATTACCAGGACGAA+CGG + chr5_1:6081631-6081650 Msa0713740:CDS 45.0%
AGGTTGAAGAAGAAGCTCCT+TGG + chr5_1:6081683-6081702 Msa0713740:CDS 45.0%
GGTTGAAGAAGAAGCTCCTT+GGG + chr5_1:6081684-6081703 Msa0713740:CDS 45.0%
AGAAGCTCCTTGGGAAACAA+AGG + chr5_1:6081693-6081712 Msa0713740:CDS 45.0%
GAATACTCTGCAGGCCAATA+AGG - chr5_1:6081839-6081858 None:intergenic 45.0%
GGATGAACAGAATACTCTGC+AGG - chr5_1:6081848-6081867 None:intergenic 45.0%
CTTGTGGAACTGATCCTTGT+TGG - chr5_1:6082222-6082241 None:intergenic 45.0%
!! ACATTGGCTTTGTCACAGCA+AGG - chr5_1:6080950-6080969 None:intergenic 45.0%
GATCCAGGACTTAAGAGATG+TGG + chr5_1:6081246-6081265 Msa0713740:intron 45.0%
TTCCCACATCTCTTAAGTCC+TGG - chr5_1:6081252-6081271 None:intergenic 45.0%
GGAAAAGCTGTCGTCTTAGA+TGG + chr5_1:6081268-6081287 Msa0713740:CDS 45.0%
TGCAGCCTCTATGTTAGCAT+CGG + chr5_1:6081354-6081373 Msa0713740:CDS 45.0%
TGCTTCCGATGCTAACATAG+AGG - chr5_1:6081362-6081381 None:intergenic 45.0%
! TCTATGTTAGCATCGGAAGC+AGG + chr5_1:6081361-6081380 Msa0713740:CDS 45.0%
TACCAACCGAGCTATCTACT+TGG + chr5_1:6081506-6081525 Msa0713740:intron 45.0%
TTCCAAGTAGATAGCTCGGT+TGG - chr5_1:6081511-6081530 None:intergenic 45.0%
AGCACAATTACCAGGACGAA+CGG + chr5_1:6081631-6081650 Msa0713740:CDS 45.0%
AGGTTGAAGAAGAAGCTCCT+TGG + chr5_1:6081683-6081702 Msa0713740:CDS 45.0%
GGTTGAAGAAGAAGCTCCTT+GGG + chr5_1:6081684-6081703 Msa0713740:CDS 45.0%
AGAAGCTCCTTGGGAAACAA+AGG + chr5_1:6081693-6081712 Msa0713740:CDS 45.0%
GAATACTCTGCAGGCCAATA+AGG - chr5_1:6081839-6081858 None:intergenic 45.0%
GGATGAACAGAATACTCTGC+AGG - chr5_1:6081848-6081867 None:intergenic 45.0%
CTTGTGGAACTGATCCTTGT+TGG - chr5_1:6082222-6082241 None:intergenic 45.0%
!!! TAATTAATTAATAAGTTTTA+GGG - chr5_1:6081456-6081475 None:intergenic 5.0%
!!! TAATTAATTAATAAGTTTTA+GGG - chr5_1:6081456-6081475 None:intergenic 5.0%
GGAGCTCTTCCCATGTTTGT+TGG - chr5_1:6080929-6080948 None:intergenic 50.0%
GCATCTTCTTCAGGTGACCA+TGG - chr5_1:6080983-6081002 None:intergenic 50.0%
TCTGTGGATGTGTGTGATCC+AGG + chr5_1:6081231-6081250 Msa0713740:intron 50.0%
GCTCCTTGGGAAACAAAGGA+AGG + chr5_1:6081697-6081716 Msa0713740:CDS 50.0%
! GCTCCTTCCTTTGTTTCCCA+AGG - chr5_1:6081703-6081722 None:intergenic 50.0%
!! GAATTTGATGGTGGCGGCTT+CGG + chr5_1:6081790-6081809 Msa0713740:CDS 50.0%
!! AATTTGATGGTGGCGGCTTC+GGG + chr5_1:6081791-6081810 Msa0713740:CDS 50.0%
GGAGCTCTTCCCATGTTTGT+TGG - chr5_1:6080929-6080948 None:intergenic 50.0%
GCATCTTCTTCAGGTGACCA+TGG - chr5_1:6080983-6081002 None:intergenic 50.0%
TCTGTGGATGTGTGTGATCC+AGG + chr5_1:6081231-6081250 Msa0713740:intron 50.0%
GCTCCTTGGGAAACAAAGGA+AGG + chr5_1:6081697-6081716 Msa0713740:CDS 50.0%
! GCTCCTTCCTTTGTTTCCCA+AGG - chr5_1:6081703-6081722 None:intergenic 50.0%
!! GAATTTGATGGTGGCGGCTT+CGG + chr5_1:6081790-6081809 Msa0713740:CDS 50.0%
!! AATTTGATGGTGGCGGCTTC+GGG + chr5_1:6081791-6081810 Msa0713740:CDS 50.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 6080896 6082359 6080896 ID=Msa0713740;Name=Msa0713740
chr5_1 mRNA 6080896 6082359 6080896 ID=Msa0713740-mRNA-1;Parent=Msa0713740;Name=Msa0713740-mRNA-1;_AED=0.06;_eAED=0.06;_QI=39|1|1|1|1|1|3|68|313
chr5_1 exon 6080896 6081070 6080896 ID=Msa0713740-mRNA-1:exon:2596;Parent=Msa0713740-mRNA-1
chr5_1 exon 6081253 6081382 6081253 ID=Msa0713740-mRNA-1:exon:2597;Parent=Msa0713740-mRNA-1
chr5_1 exon 6081616 6082359 6081616 ID=Msa0713740-mRNA-1:exon:2598;Parent=Msa0713740-mRNA-1
chr5_1 five_prime_UTR 6080896 6080934 6080896 ID=Msa0713740-mRNA-1:five_prime_utr;Parent=Msa0713740-mRNA-1
chr5_1 CDS 6080935 6081070 6080935 ID=Msa0713740-mRNA-1:cds;Parent=Msa0713740-mRNA-1
chr5_1 CDS 6081253 6081382 6081253 ID=Msa0713740-mRNA-1:cds;Parent=Msa0713740-mRNA-1
chr5_1 CDS 6081616 6082291 6081616 ID=Msa0713740-mRNA-1:cds;Parent=Msa0713740-mRNA-1
chr5_1 three_prime_UTR 6082292 6082359 6082292 ID=Msa0713740-mRNA-1:three_prime_utr;Parent=Msa0713740-mRNA-1
Gene Sequence

>Msa0713740

ATGGGAAGAGCTCCTTGCTGTGACAAAGCCAATGTCAAAAAAGGTCCATGGTCACCTGAAGAAGATGCAAAACTCAAGTCTTACATAGAACAAAATGGTACTGGTGGAAATTGGATTGCTCTACCTCAAAAGATAGGACTTAAGAGATGTGGGAAAAGCTGTCGTCTTAGATGGTTAAATTATCTTAGACCAAATATTAAACATGGTGGCTTCTCCGAAGAAGAAGACGACATTATTTGCAGCCTCTATGTTAGCATCGGAAGCAGGTGGTCTATCATAGCAGCACAATTACCAGGACGAACGGATAATGATATAAAGAACTACTGGAACACTAGGTTGAAGAAGAAGCTCCTTGGGAAACAAAGGAAGGAGCAACAAGCTCAAGCACAAGCTCGCCGAGTTAGCAACATGAAACAAGAGATGAAAAGAGAAATAAATCAGAATTTGATGGTGGCGGCTTCGGGTGTCAATAATATGAGTTCAGCTCCTTATTGGCCTGCAGAGTATTCTGTTCATCCTATGCCAGTTTCAAATTCATCCATAATTGATTATGATATGAACAATCAAACATCTTTCACAAGCTTAATGAACATTCCAAACCCTTTTTCCATTGTGAGTAATACAATTACAAACAATGGTGGAAATTGCCAACCATCAAATATATTTCAAGGGTTTGAAAATTTTCCAAGGGATTTAAGTGAGCTTGTATGTGTGAACCAACAACAAATAATGGATAGAACAATTGATGGTTTTTATGGAATGGAATCTATTGACATGAGCAATGGTGGTAGCACAATCACAACAACTTCAACAGAAAGCACTAGTTGGGGAGATATGAACTCTTTGGTTTATGACTATGAAGGTTGTTGCCAACAAGGATCAGTTCCACAAGATGCTATTGCTTTTGAGGAGTCTAGGTATTTTGGAATGCAAATGCAATAA
Protein sequence

>Msa0713740

MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQNGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDDIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGKQRKEQQAQAQARRVSNMKQEMKREINQNLMVAASGVNNMSSAPYWPAEYSVHPMPVSNSSIIDYDMNNQTSFTSLMNIPNPFSIVSNTITNNGGNCQPSNIFQGFENFPRDLSELVCVNQQQIMDRTIDGFYGMESIDMSNGGSTITTTSTESTSWGDMNSLVYDYEGCCQQGSVPQDAIAFEESRYFGMQMQ*